|
Name |
Accession |
Description |
Interval |
E-value |
| HemY |
COG1232 |
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen ... |
3-436 |
2.06e-82 |
|
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen oxidase HemY/PPOX is part of the Pathway/BioSystem: Heme biosynthesis
Pssm-ID: 440845 [Multi-domain] Cd Length: 443 Bit Score: 260.54 E-value: 2.06e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 3 RTVVVLGGGISGLAASYHLSRAPCppKVVLVESSERLGGWIRSVRGpNGAIFELGPRGIRPAGAlgaRTLLLVSELGLDS 82
Cdd:COG1232 2 KRVAVIGGGIAGLTAAYRLAKAGH--EVTVLEASDRVGGLIRTVEV-DGFRIDRGPHSFLTRDP---EVLELLRELGLGD 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 83 EVLpvrgdHPAAQNRFLYVGGALHALPTGLRGLLRpSPPFSKPLFWAGLRE-LTKPRGKEPDETVHSFAQRRLGPEVASL 161
Cdd:COG1232 76 ELV-----WPNTRKSYIYYGGKLHPLPQGPLALLR-SPLLSLAGKLRALLElLAPRRPPGEDESLAEFVRRRFGREVYER 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 162 AMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTHRSillglllgagrtpqpdsaLIRQALAERWSQ------WSLRGGLEM 235
Cdd:COG1232 150 LVEPLLEGVYAGDPDELSADWAFPRLKRLELEHGS------------------LIKGALALRKGAkagevfGYLRGGLGT 211
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 236 LPQALETHLtsRGVSVLRGQPVCGLSlQAEGRWKVSLRD-SSLEADHVISAIPASVLSELLPAEAAPLARALSAITAVSV 314
Cdd:COG1232 212 LVEALAEAL--EAGEIRLGTRVTAIE-REGGGWRVTTSDgETIEADAVVSATPAPALARLLAPLPPEVAAALAGIPYASV 288
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 315 AVVNLQYQGAHLPV------------QVMLGG-----SWLQTLEASGCVL----------------SQELFQQRAQEAAA 361
Cdd:COG1232 289 AVVALGFDRPDLPPpdgfgwlvprdeGVPILAvtfssNKWPHRAPDGKVLlrlevggagdpelwqlSDEELVALALADLR 368
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1678214321 362 TQLGLKEMPSHCLVHLHKNCIPQYTLGHWQKLESARQFLTAHRlPLTLAGASYEGVAVNDCIESGRQAAVSVLGT 436
Cdd:COG1232 369 KLLGIDAEPVDTRVVRWPKAYPQYTVGHLERVAAIREALAALP-GLYLAGRAYDGVGLPDCIRSGREAAERILAE 442
|
|
| proto_IX_ox |
TIGR00562 |
protoporphyrinogen oxidase; This enzyme oxidizes protoporphyrinogen IX to protoporphyrin IX, a ... |
3-434 |
1.81e-62 |
|
protoporphyrinogen oxidase; This enzyme oxidizes protoporphyrinogen IX to protoporphyrin IX, a precursor of heme and chlorophyll. Bacillus subtilis HemY also has coproporphyrinogen III to coproporphyrin III oxidase activity in a heterologous expression system, although the role for this activity in vivo is unclear. This protein is a flavoprotein and has a beta-alpha-beta dinucleotide binding motif near the amino end. [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin]
Pssm-ID: 213540 [Multi-domain] Cd Length: 462 Bit Score: 208.92 E-value: 1.81e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 3 RTVVVLGGGISGLAASYHLS--RAPCPPKVVLVESSERLGGWIRSVRgPNGAIFELGPRGIRPAGAlgaRTLLLVSELGL 80
Cdd:TIGR00562 3 KHVVIIGGGISGLCAAYYLEkeIPELPVELTLVEASDRVGGKIQTVK-EDGYLIERGPDSFLERKK---SAPDLVKDLGL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 81 DsevlPVRGDHPAAQnRFLYV-GGALHALPTglrgllRPSPPFSKPLFWAG-----LRELTKPRGKEPDETVHSFAQRRL 154
Cdd:TIGR00562 79 E----HVLVSDATGQ-RYVLVnRGKLMPVPT------KIAPFVKTGLFSLGgklraGMDFIRPASPGKDESVEEFVRRRF 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 155 GPEVASLAMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTHRSILLGLLlgagRTPQPDSALIRQALAERWSQW--SLRGG 232
Cdd:TIGR00562 148 GDEVVENLIEPLLSGIYAGDPSKLSLKSTFPKFYQTEQKHGSLILGMK----KTRNLPQGSGLQLTAKKQGQDfqTLATG 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 233 LEMLPQALETHLtsRGVSVLRGQPVCGLSLQAEGRWKVSLRDSSLEADHVISAIPASVLSELLPAEAAPLARALSAITAV 312
Cdd:TIGR00562 224 LETLPEEIEKRL--KLTKVYKGTKVTKLSHRGSNYTLELDNGVTVETDSVVVTAPHKAAAGLLSELSNSASSHLDKIHSP 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 313 SVAVVNLQY-----QGAHLPVQVMLGGSwlQTLEASGCVLSQELFQQRAQEAA-------------------------AT 362
Cdd:TIGR00562 302 PVANVNLGFpegsvDGELEGFGFLISRS--SKFAILGCIFTSKLFPNRAPPGKtlltayiggatdesivdlseneiinIV 379
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1678214321 363 QLGLKEM------PSHCLVHLHKNCIPQYTLGHWQKLESARQFLTAHRLPLTLAGASYEGVAVNDCIESGRQAAVSVL 434
Cdd:TIGR00562 380 LRDLKKVlninnePEMLCVTRWHRAIPQYHVGHDQRLKEARELLESAYPGVFLTGNSFEGVGIPDCIDQGKAAASDVL 457
|
|
| PRK11883 |
PRK11883 |
protoporphyrinogen oxidase; Reviewed |
3-435 |
2.25e-56 |
|
protoporphyrinogen oxidase; Reviewed
Pssm-ID: 237009 [Multi-domain] Cd Length: 451 Bit Score: 192.76 E-value: 2.25e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRgPNGAIFELGPRGIrpagaLGAR--TLLLVSELGL 80
Cdd:PRK11883 1 KKVAIIGGGITGLSAAYRLHKKGPDADITLLEASDRLGGKIQTVR-KDGFPIELGPESF-----LARKpsAPALVKELGL 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 81 DSEVLpvrgdHPAAQNRFLYVGGALHALPTG-LRGLlrpsPPFSKPLFWAGL----------RELTKPRGK-EPDETVHS 148
Cdd:PRK11883 75 EDELV-----ANTTGQSYIYVNGKLHPIPPGtVMGI----PTSIAPFLFAGLvspigklraaADLRPPRWKpGQDQSVGA 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 149 FAQRRLGPEVASLAMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTHRSIllglLLGAGRTPQPDSALIRQALAerwsqwS 228
Cdd:PRK11883 146 FFRRRFGDEVVENLIEPLLSGIYAGDIDTLSLRATFPQLAQAEDKYGSL----LRGMRKALPKEKKKTKGVFG------T 215
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 229 LRGGLEMLPQALETHLtsRGVSVLRGQPVCGLSLQAEGrWKVSLRDSS-LEADHVISAIPASVLSELLPAEAAplARALS 307
Cdd:PRK11883 216 LKGGLQSLIEALEEKL--PAGTIHKGTPVTKIDKSGDG-YEIVLSNGGeIEADAVIVAVPHPVLPSLFVAPPA--FALFK 290
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 308 AITAVSVAVVNLQYQGAHLPVQ-----VMLGGSwlqTLEASGCVLSQELFQQRAQE------------------------ 358
Cdd:PRK11883 291 TIPSTSVATVALAFPESATNLPdgtgfLVARNS---DYTITACTWTSKKWPHTTPEgkvllrlyvgrpgdeavvdatdee 367
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 359 --AAATQ-----LGLKEMPSHCLVHLHKNCIPQYTLGHWQKLESARQFLtAHRLPLTLAGASYEGVAVNDCIESGRQAAV 431
Cdd:PRK11883 368 lvAFVLAdlskvMGITGDPEFTIVQRWKEAMPQYGVGHIERVAELRAGL-PHYPGLYVAGASFEGVGLPDCIAQAKRAAA 446
|
....
gi 1678214321 432 SVLG 435
Cdd:PRK11883 447 RLLA 450
|
|
| Amino_oxidase |
pfam01593 |
Flavin containing amine oxidoreductase; This family consists of various amine oxidases, ... |
12-434 |
1.56e-40 |
|
Flavin containing amine oxidoreductase; This family consists of various amine oxidases, including maze polyamine oxidase (PAO)and various flavin containing monoamine oxidases (MAO). The aligned region includes the flavin binding site of these enzymes. The family also contains phytoene dehydrogenases and related enzymes. In vertebrates MAO plays an important role regulating the intracellular levels of amines via there oxidation; these include various neurotransmitters, neurotoxins and trace amines. In lower eukaryotes such as aspergillus and in bacteria the main role of amine oxidases is to provide a source of ammonium. PAOs in plants, bacteria and protozoa oxidase spermidine and spermine to an aminobutyral, diaminopropane and hydrogen peroxide and are involved in the catabolism of polyamines. Other members of this family include tryptophan 2-monooxygenase, putrescine oxidase, corticosteroid binding proteins and antibacterial glycoproteins.
Pssm-ID: 396255 [Multi-domain] Cd Length: 446 Bit Score: 150.33 E-value: 1.56e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 12 ISGLAASYHLSRAPcpPKVVLVESSERLGGWIRSVRGPnGAIFELGPRGIRPAGAlgaRTLLLVSELGLDSEVlpvRGDH 91
Cdd:pfam01593 1 LAGLAAARELLRAG--HDVTVLEARDRVGGRIRTVRDD-GFLIELGAMWFHGAQP---PLLALLKELGLEDRL---VLPD 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 92 PAAQNRFLYVGG-----ALHALPTGLRGLLRPSPPFS---------KPLFWAGLRELtKPRGKEPDETVHSFAQRRLGP- 156
Cdd:pfam01593 72 PAPFYTVLFAGGrrypgDFRRVPAGWEGLLEFGRLLSipeklrlglAALASDALDEF-DLDDFSLAESLLFLGRRGPGDv 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 157 -------EVASLAMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTHRSIllglllgagrtpqpdsalirqalaerwsqWSL 229
Cdd:pfam01593 151 evwdrliDPELFAALPFASGAFAGDPSELSAGLALPLLWALLGEGGSL-----------------------------LLP 201
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 230 RGGLEMLPQALETHLtsRGVSVLRGQPVCGLSLQAEGRwKVSLRD-SSLEADHVISAIPASVLS--ELLPAEAAPLARAL 306
Cdd:pfam01593 202 RGGLGALPDALAAQL--LGGDVRLNTRVRSIDREGDGV-TVTLTDgEVIEADAVIVTVPLGVLKriLFTPPLPPEKARAI 278
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 307 SAITAVSVAVVNLQYQGAHLPVQVMLGG------------SW--------------LQTLEASGCVLSQELFQQRAQEAA 360
Cdd:pfam01593 279 RNLGYGPVNKVHLEFDRKFWPDLGLLGLlselltglgtafSWltfpnrappgkgllLLVYVGPGDRARELEGLSDEELLQ 358
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 361 ATQLGLKEM-------PSHCLVH-LHKNCIPQYTLGHWQKLESARQFLTAHRLP---LTLAGAS----YEGVaVNDCIES 425
Cdd:pfam01593 359 AVLRDLRKLfgeeapePLRVLVSdWHTDPWPRGSYSLPQYGPGHDDYRPLARTPdpgLFFAGEHtstgYPGT-VEGAIES 437
|
....*....
gi 1678214321 426 GRQAAVSVL 434
Cdd:pfam01593 438 GRRAARAVL 446
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| HemY |
COG1232 |
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen ... |
3-436 |
2.06e-82 |
|
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen oxidase HemY/PPOX is part of the Pathway/BioSystem: Heme biosynthesis
Pssm-ID: 440845 [Multi-domain] Cd Length: 443 Bit Score: 260.54 E-value: 2.06e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 3 RTVVVLGGGISGLAASYHLSRAPCppKVVLVESSERLGGWIRSVRGpNGAIFELGPRGIRPAGAlgaRTLLLVSELGLDS 82
Cdd:COG1232 2 KRVAVIGGGIAGLTAAYRLAKAGH--EVTVLEASDRVGGLIRTVEV-DGFRIDRGPHSFLTRDP---EVLELLRELGLGD 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 83 EVLpvrgdHPAAQNRFLYVGGALHALPTGLRGLLRpSPPFSKPLFWAGLRE-LTKPRGKEPDETVHSFAQRRLGPEVASL 161
Cdd:COG1232 76 ELV-----WPNTRKSYIYYGGKLHPLPQGPLALLR-SPLLSLAGKLRALLElLAPRRPPGEDESLAEFVRRRFGREVYER 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 162 AMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTHRSillglllgagrtpqpdsaLIRQALAERWSQ------WSLRGGLEM 235
Cdd:COG1232 150 LVEPLLEGVYAGDPDELSADWAFPRLKRLELEHGS------------------LIKGALALRKGAkagevfGYLRGGLGT 211
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 236 LPQALETHLtsRGVSVLRGQPVCGLSlQAEGRWKVSLRD-SSLEADHVISAIPASVLSELLPAEAAPLARALSAITAVSV 314
Cdd:COG1232 212 LVEALAEAL--EAGEIRLGTRVTAIE-REGGGWRVTTSDgETIEADAVVSATPAPALARLLAPLPPEVAAALAGIPYASV 288
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 315 AVVNLQYQGAHLPV------------QVMLGG-----SWLQTLEASGCVL----------------SQELFQQRAQEAAA 361
Cdd:COG1232 289 AVVALGFDRPDLPPpdgfgwlvprdeGVPILAvtfssNKWPHRAPDGKVLlrlevggagdpelwqlSDEELVALALADLR 368
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1678214321 362 TQLGLKEMPSHCLVHLHKNCIPQYTLGHWQKLESARQFLTAHRlPLTLAGASYEGVAVNDCIESGRQAAVSVLGT 436
Cdd:COG1232 369 KLLGIDAEPVDTRVVRWPKAYPQYTVGHLERVAAIREALAALP-GLYLAGRAYDGVGLPDCIRSGREAAERILAE 442
|
|
| proto_IX_ox |
TIGR00562 |
protoporphyrinogen oxidase; This enzyme oxidizes protoporphyrinogen IX to protoporphyrin IX, a ... |
3-434 |
1.81e-62 |
|
protoporphyrinogen oxidase; This enzyme oxidizes protoporphyrinogen IX to protoporphyrin IX, a precursor of heme and chlorophyll. Bacillus subtilis HemY also has coproporphyrinogen III to coproporphyrin III oxidase activity in a heterologous expression system, although the role for this activity in vivo is unclear. This protein is a flavoprotein and has a beta-alpha-beta dinucleotide binding motif near the amino end. [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin]
Pssm-ID: 213540 [Multi-domain] Cd Length: 462 Bit Score: 208.92 E-value: 1.81e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 3 RTVVVLGGGISGLAASYHLS--RAPCPPKVVLVESSERLGGWIRSVRgPNGAIFELGPRGIRPAGAlgaRTLLLVSELGL 80
Cdd:TIGR00562 3 KHVVIIGGGISGLCAAYYLEkeIPELPVELTLVEASDRVGGKIQTVK-EDGYLIERGPDSFLERKK---SAPDLVKDLGL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 81 DsevlPVRGDHPAAQnRFLYV-GGALHALPTglrgllRPSPPFSKPLFWAG-----LRELTKPRGKEPDETVHSFAQRRL 154
Cdd:TIGR00562 79 E----HVLVSDATGQ-RYVLVnRGKLMPVPT------KIAPFVKTGLFSLGgklraGMDFIRPASPGKDESVEEFVRRRF 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 155 GPEVASLAMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTHRSILLGLLlgagRTPQPDSALIRQALAERWSQW--SLRGG 232
Cdd:TIGR00562 148 GDEVVENLIEPLLSGIYAGDPSKLSLKSTFPKFYQTEQKHGSLILGMK----KTRNLPQGSGLQLTAKKQGQDfqTLATG 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 233 LEMLPQALETHLtsRGVSVLRGQPVCGLSLQAEGRWKVSLRDSSLEADHVISAIPASVLSELLPAEAAPLARALSAITAV 312
Cdd:TIGR00562 224 LETLPEEIEKRL--KLTKVYKGTKVTKLSHRGSNYTLELDNGVTVETDSVVVTAPHKAAAGLLSELSNSASSHLDKIHSP 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 313 SVAVVNLQY-----QGAHLPVQVMLGGSwlQTLEASGCVLSQELFQQRAQEAA-------------------------AT 362
Cdd:TIGR00562 302 PVANVNLGFpegsvDGELEGFGFLISRS--SKFAILGCIFTSKLFPNRAPPGKtlltayiggatdesivdlseneiinIV 379
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1678214321 363 QLGLKEM------PSHCLVHLHKNCIPQYTLGHWQKLESARQFLTAHRLPLTLAGASYEGVAVNDCIESGRQAAVSVL 434
Cdd:TIGR00562 380 LRDLKKVlninnePEMLCVTRWHRAIPQYHVGHDQRLKEARELLESAYPGVFLTGNSFEGVGIPDCIDQGKAAASDVL 457
|
|
| PRK11883 |
PRK11883 |
protoporphyrinogen oxidase; Reviewed |
3-435 |
2.25e-56 |
|
protoporphyrinogen oxidase; Reviewed
Pssm-ID: 237009 [Multi-domain] Cd Length: 451 Bit Score: 192.76 E-value: 2.25e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRgPNGAIFELGPRGIrpagaLGAR--TLLLVSELGL 80
Cdd:PRK11883 1 KKVAIIGGGITGLSAAYRLHKKGPDADITLLEASDRLGGKIQTVR-KDGFPIELGPESF-----LARKpsAPALVKELGL 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 81 DSEVLpvrgdHPAAQNRFLYVGGALHALPTG-LRGLlrpsPPFSKPLFWAGL----------RELTKPRGK-EPDETVHS 148
Cdd:PRK11883 75 EDELV-----ANTTGQSYIYVNGKLHPIPPGtVMGI----PTSIAPFLFAGLvspigklraaADLRPPRWKpGQDQSVGA 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 149 FAQRRLGPEVASLAMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTHRSIllglLLGAGRTPQPDSALIRQALAerwsqwS 228
Cdd:PRK11883 146 FFRRRFGDEVVENLIEPLLSGIYAGDIDTLSLRATFPQLAQAEDKYGSL----LRGMRKALPKEKKKTKGVFG------T 215
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 229 LRGGLEMLPQALETHLtsRGVSVLRGQPVCGLSLQAEGrWKVSLRDSS-LEADHVISAIPASVLSELLPAEAAplARALS 307
Cdd:PRK11883 216 LKGGLQSLIEALEEKL--PAGTIHKGTPVTKIDKSGDG-YEIVLSNGGeIEADAVIVAVPHPVLPSLFVAPPA--FALFK 290
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 308 AITAVSVAVVNLQYQGAHLPVQ-----VMLGGSwlqTLEASGCVLSQELFQQRAQE------------------------ 358
Cdd:PRK11883 291 TIPSTSVATVALAFPESATNLPdgtgfLVARNS---DYTITACTWTSKKWPHTTPEgkvllrlyvgrpgdeavvdatdee 367
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 359 --AAATQ-----LGLKEMPSHCLVHLHKNCIPQYTLGHWQKLESARQFLtAHRLPLTLAGASYEGVAVNDCIESGRQAAV 431
Cdd:PRK11883 368 lvAFVLAdlskvMGITGDPEFTIVQRWKEAMPQYGVGHIERVAELRAGL-PHYPGLYVAGASFEGVGLPDCIAQAKRAAA 446
|
....
gi 1678214321 432 SVLG 435
Cdd:PRK11883 447 RLLA 450
|
|
| PLN02576 |
PLN02576 |
protoporphyrinogen oxidase |
2-434 |
1.07e-45 |
|
protoporphyrinogen oxidase
Pssm-ID: 215314 [Multi-domain] Cd Length: 496 Bit Score: 165.19 E-value: 1.07e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 2 GRTVVVLGGGISGLAASYHLSRAPCPpKVVLVESSERLGGWIRSVRGpNGAIFELGPRGIRPAGALgartLLLVSELGL- 80
Cdd:PLN02576 12 SKDVAVVGAGVSGLAAAYALASKHGV-NVLVTEARDRVGGNITSVSE-DGFIWEEGPNSFQPSDPE----LTSAVDSGLr 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 81 DSEVLPVrgdhPAAqNRFLYVGGALHALPTGLRGLlrpspPFSKPLFWAG-LRELTKP----RGKEPD--ETVHSFAQRR 153
Cdd:PLN02576 86 DDLVFPD----PQA-PRYVVWNGKLRPLPSNPIDL-----PTFDLLSAPGkIRAGLGAfgwkRPPPPGreESVGEFVRRH 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 154 LGPEVASLAMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTHRSI-----LLGLLLGAGRTPQP-DSALIRQalaERWSQW 227
Cdd:PLN02576 156 LGDEVFERLIDPFVSGVYAGDPSSLSMKAAFPKLWNLEKRGGSIiggaiKAIQEAKKNPKPEPrDPRLPKP---KGQTVG 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 228 SLRGGLEMLPQALETHLTSRGVSVlrGQPVCGLSLQAEGRWKVSLRD----SSLEADHVISAIPASVLSELLPAEAAPLA 303
Cdd:PLN02576 233 SFRGGLQTLPDALAKRLGKDKVKL--NWKVLSLSKNDDGGYSLTYDTpegkVNVTAKAVVMTAPLYVVSEMLRPKSPAAA 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 304 RALSAITAVSVAVVNLQY-----QGAHLPVQVMLGGSWL----QTLEASGCVLSQELFQQRAQE---------AAATQLG 365
Cdd:PLN02576 311 DALPEFYYPPVAAVTTSYpkeavKRERLIDGPLEGFGQLhprkQGVKTLGTIYSSSLFPDRAPEgrvlllnyiGGSRNTG 390
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 366 LKEMPSHCLVH-----LHK-------------------NCIPQYTLGHWQKLESARQFLTAHRLP-LTLAGASYEGVAVN 420
Cdd:PLN02576 391 IASASEEELVEavdrdLRKlllkpgapppkvvgvrvwpKAIPQYLLGHLDVLEAAEKMEKDLGLPgLFLGGNYRGGVALG 470
|
490
....*....|....
gi 1678214321 421 DCIESGRQAAVSVL 434
Cdd:PLN02576 471 KCVESGYEAADLVI 484
|
|
| Amino_oxidase |
pfam01593 |
Flavin containing amine oxidoreductase; This family consists of various amine oxidases, ... |
12-434 |
1.56e-40 |
|
Flavin containing amine oxidoreductase; This family consists of various amine oxidases, including maze polyamine oxidase (PAO)and various flavin containing monoamine oxidases (MAO). The aligned region includes the flavin binding site of these enzymes. The family also contains phytoene dehydrogenases and related enzymes. In vertebrates MAO plays an important role regulating the intracellular levels of amines via there oxidation; these include various neurotransmitters, neurotoxins and trace amines. In lower eukaryotes such as aspergillus and in bacteria the main role of amine oxidases is to provide a source of ammonium. PAOs in plants, bacteria and protozoa oxidase spermidine and spermine to an aminobutyral, diaminopropane and hydrogen peroxide and are involved in the catabolism of polyamines. Other members of this family include tryptophan 2-monooxygenase, putrescine oxidase, corticosteroid binding proteins and antibacterial glycoproteins.
Pssm-ID: 396255 [Multi-domain] Cd Length: 446 Bit Score: 150.33 E-value: 1.56e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 12 ISGLAASYHLSRAPcpPKVVLVESSERLGGWIRSVRGPnGAIFELGPRGIRPAGAlgaRTLLLVSELGLDSEVlpvRGDH 91
Cdd:pfam01593 1 LAGLAAARELLRAG--HDVTVLEARDRVGGRIRTVRDD-GFLIELGAMWFHGAQP---PLLALLKELGLEDRL---VLPD 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 92 PAAQNRFLYVGG-----ALHALPTGLRGLLRPSPPFS---------KPLFWAGLRELtKPRGKEPDETVHSFAQRRLGP- 156
Cdd:pfam01593 72 PAPFYTVLFAGGrrypgDFRRVPAGWEGLLEFGRLLSipeklrlglAALASDALDEF-DLDDFSLAESLLFLGRRGPGDv 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 157 -------EVASLAMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTHRSIllglllgagrtpqpdsalirqalaerwsqWSL 229
Cdd:pfam01593 151 evwdrliDPELFAALPFASGAFAGDPSELSAGLALPLLWALLGEGGSL-----------------------------LLP 201
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 230 RGGLEMLPQALETHLtsRGVSVLRGQPVCGLSLQAEGRwKVSLRD-SSLEADHVISAIPASVLS--ELLPAEAAPLARAL 306
Cdd:pfam01593 202 RGGLGALPDALAAQL--LGGDVRLNTRVRSIDREGDGV-TVTLTDgEVIEADAVIVTVPLGVLKriLFTPPLPPEKARAI 278
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 307 SAITAVSVAVVNLQYQGAHLPVQVMLGG------------SW--------------LQTLEASGCVLSQELFQQRAQEAA 360
Cdd:pfam01593 279 RNLGYGPVNKVHLEFDRKFWPDLGLLGLlselltglgtafSWltfpnrappgkgllLLVYVGPGDRARELEGLSDEELLQ 358
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 361 ATQLGLKEM-------PSHCLVH-LHKNCIPQYTLGHWQKLESARQFLTAHRLP---LTLAGAS----YEGVaVNDCIES 425
Cdd:pfam01593 359 AVLRDLRKLfgeeapePLRVLVSdWHTDPWPRGSYSLPQYGPGHDDYRPLARTPdpgLFFAGEHtstgYPGT-VEGAIES 437
|
....*....
gi 1678214321 426 GRQAAVSVL 434
Cdd:pfam01593 438 GRRAARAVL 446
|
|
| PRK12416 |
PRK12416 |
protoporphyrinogen oxidase; Provisional |
3-436 |
1.99e-26 |
|
protoporphyrinogen oxidase; Provisional
Pssm-ID: 183516 Cd Length: 463 Bit Score: 111.07 E-value: 1.99e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 3 RTVVVLGGGISGLAASYHLSRAP----CPPKVVLVESSERLGGWIRSVRGpNGAIFELGprgirpAGALGAR---TLLLV 75
Cdd:PRK12416 2 KTVVVIGGGITGLSTMFYLEKLKkdynIDLNLILVEKEEYLGGKIHSVEE-KDFIMESG------ADSIVARnehVMPLV 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 76 SELGLDSEVLpvrgdHPAAQNRFLYVGGALH--------ALPTGLRGLLRPSPPFSKPLFWAGLRELTKPRGKEPDETVH 147
Cdd:PRK12416 75 KDLNLEEEMV-----YNETGISYIYSDNTLHpipsdtifGIPMSVESLFSSTLVSTKGKIVALKDFITKNKEFTKDTSLA 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 148 SFAQRRLGPEVASLAMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTHRSILlglllgagrtpqpdsalirQALAERWSQW 227
Cdd:PRK12416 150 LFLESFLGKELVERQIAPVLSGVYSGKLNELTMASTLPYLLDYKNKYGSII-------------------KGFEENKKQF 210
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 228 ---------SLRGGLEMLPQALETHLTSrgVSVLRGQPVCGLSLQAEgRWKVSLRD-SSLEADHVISAIPASVLSELLpa 297
Cdd:PRK12416 211 qsagnkkfvSFKGGLSTIIDRLEEVLTE--TVVKKGAVTTAVSKQGD-RYEISFANhESIQADYVVLAAPHDIAETLL-- 285
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 298 EAAPLARALSAITAVSVAVVNLQY-----------------QGAHLPVQVMLGGS--WLQTLEASGCV------------ 346
Cdd:PRK12416 286 QSNELNEQFHTFKNSSLISIYLGFdildeqlpadgtgfivtENSDLHCDACTWTSrkWKHTSGKQKLLvrmfykstnpvy 365
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 347 -----LSQELFQQRAQEAAATQLGLKEMPSHCLVHLHKNCIPQYTLGHWQKLESARQFLTAHRLPLTLAGASYEGVAVND 421
Cdd:PRK12416 366 etiknYSEEELVRVALYDIEKSLGIKGEPEVVEVTNWKDLMPKYHLEHNQAVQSLQEKMMNLYPNIYLAGASYYGVGIGA 445
|
490
....*....|....*
gi 1678214321 422 CIESGRQAAVSVLGT 436
Cdd:PRK12416 446 CIGNGKNTANEIIAT 460
|
|
| YobN |
COG1231 |
Monoamine oxidase [Amino acid transport and metabolism]; |
2-321 |
7.37e-25 |
|
Monoamine oxidase [Amino acid transport and metabolism];
Pssm-ID: 440844 [Multi-domain] Cd Length: 440 Bit Score: 106.16 E-value: 7.37e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 2 GRTVVVLGGGISGLAASYHLSRAPCppKVVLVESSERLGGWIRSVRGP-NGAIFELGPRGIRPAgalGARTLLLVSELGL 80
Cdd:COG1231 7 GKDVVIVGAGLAGLAAARELRKAGL--DVTVLEARDRVGGRVWTLRFGdDGLYAELGAMRIPPS---HTNLLALARELGL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 81 DSEVLPvrgdhPAAQNRFLYVGGALHALPTGLRGLLRPSPPFSK---PLFwAGLRELTKPRGKEPDETVHSFAQRRLGPE 157
Cdd:COG1231 82 PLEPFP-----NENGNALLYLGGKRVRAGEIAADLRGVAELLAKllrALA-AALDPWAHPAAELDRESLAEWLRRNGASP 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 158 VASLAMDSLCRGVFAGNSRELSIrscfpslfqaeqthrsillglllgagrtpqpdSALIRQALAERWS--QWSLRGGLEM 235
Cdd:COG1231 156 SARRLLGLLGAGEYGADPDELSL--------------------------------LDLLRYAASAGGGaqQFRIVGGMDQ 203
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 236 LPQALETHLTSRgvsVLRGQPVCGLSlQAEGRWKVSLRD-SSLEADHVISAIPASVLS--ELLPAEAAPLARALSAITAV 312
Cdd:COG1231 204 LPRALAAELGDR---IRLGAPVTRIR-QDGDGVTVTTDDgGTVRADAVIVTVPPSVLRriEFDPPLPAAKRAAIQRLPYG 279
|
....*....
gi 1678214321 313 SVAVVNLQY 321
Cdd:COG1231 280 AAIKVFLQF 288
|
|
| COG3349 |
COG3349 |
Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function ... |
1-334 |
5.82e-17 |
|
Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function prediction only];
Pssm-ID: 442577 [Multi-domain] Cd Length: 445 Bit Score: 82.59 E-value: 5.82e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 1 MGRTVVVLGGGISGLAASYHLSRAPCPpkVVLVESSERLGGWIRSVRGPN-GAIFELGPRGIrpagaLGA--RTLLLVSE 77
Cdd:COG3349 2 MPPRVVVVGGGLAGLAAAVELAEAGFR--VTLLEARPRLGGRARSFPDPDtGLPIDNGQHVL-----LGCyrNTLDLLRR 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 78 LGLDsevlpvrgDHPAAQNRFLYvggalhALPTGLRGLLRPSPPfskPLFWAGLRELTKPRGKEPDEtvhsfaqrRLGpe 157
Cdd:COG3349 75 IGAA--------DNLVGPEPLQF------PLPGGRRWTLRAPRL---PAPLHLLRALLRAPGLSLAD--------RLA-- 127
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 158 VASLAMDSLCRGVFAGnsRELSIRSCFPSLFQAEQTHRSILLGLLLGAGRTPqPDSA-------LIRQALA---ERWSQW 227
Cdd:COG3349 128 LLRLLTACRERRWREL--DDISVADWLRRHGQSPRLIRRLWEPLLLAALNTP-PEQAsarlaltVLRETLLagpAASDLL 204
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 228 SLRGGL-EMLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSLRD-SSLEADHVISAIPASVLSELLPA-EAAPLAR 304
Cdd:COG3349 205 VPRGPLsELFVDPALAYLEARGGEVRLGTRVRALEFDGGRVTGLVLADgETVPADAVVLAVPPEVAARLLPElARLPELG 284
|
330 340 350
....*....|....*....|....*....|....
gi 1678214321 305 ALSAITAVSVAVVNLQYQG----AHLPVQVMLGG 334
Cdd:COG3349 285 LLAPLEYSPIVNVHLWLDRpvtlGPPPFAGLVGS 318
|
|
| COG1233 |
COG1233 |
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and ... |
1-319 |
6.85e-13 |
|
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 440846 [Multi-domain] Cd Length: 491 Bit Score: 70.26 E-value: 6.85e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 1 MGRTVVVLGGGISGLAASYHLSRAPCppKVVLVESSERLGGWIRSVRGPnGAIFELGPRGIRPAGALGArtllLVSELGL 80
Cdd:COG1233 2 MMYDVVVIGAGIGGLAAAALLARAGY--RVTVLEKNDTPGGRARTFERP-GFRFDVGPSVLTMPGVLER----LFRELGL 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 81 DSEV----LPVRGDHPAAQNRFLYV------------------GGALHAL--------PTGLRGLL-RPSPPFSKPLFWA 129
Cdd:COG1233 75 EDYLelvpLDPAYRVPFPDGRALDLprdlertaaelerlfpgdAEAYRRFlaelrrlyDALLEDLLyRPLLSLRDLLRPL 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 130 GLRELtkprGKEPDETVHSFAQRRLGPEVAslamdslcRGVFAgnsrelsirscFPSLFqaeqthrsillglllgAGRTP 209
Cdd:COG1233 155 ALARL----LRLLLRSLRDLLRRYFKDPRL--------RALLA-----------GQALY----------------LGLSP 195
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 210 QPDSAL--IRQALAERWSQWSLRGGLEMLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSLRD-SSLEADHVISAI 286
Cdd:COG1233 196 DRTPALyaLIAYLEYAGGVWYPKGGMGALADALARLAEELGGEIRTGAEVERILVEGGRATGVRLADgEEIRADAVVSNA 275
|
330 340 350
....*....|....*....|....*....|....*..
gi 1678214321 287 -PASVLSELLPAEAAP--LARALSAIT-AVSVAVVNL 319
Cdd:COG1233 276 dPAHTYLRLLGEEALParYRRRLERFRySPSAFKLYL 312
|
|
| PRK07233 |
PRK07233 |
hypothetical protein; Provisional |
4-440 |
9.61e-12 |
|
hypothetical protein; Provisional
Pssm-ID: 235977 [Multi-domain] Cd Length: 434 Bit Score: 66.45 E-value: 9.61e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 4 TVVVLGGGISGLAASYHLSRAPCppKVVLVESSERLGGWirsvrgpnGAIFELGprgirpaG----------ALGARTLL 73
Cdd:PRK07233 1 KIAIVGGGIAGLAAAYRLAKRGH--EVTVFEADDQLGGL--------AASFEFG-------GlpierfyhhiFKSDEALL 63
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 74 -LVSELGLDSEVLPVRGdhpaaQNRFlYVGGALHALPTGLRgLLRpSPPFS--------KPLFWAGLRELTKPRGKEPDE 144
Cdd:PRK07233 64 eLLDELGLEDKLRWRET-----KTGY-YVDGKLYPLGTPLE-LLR-FPHLSlidkfrlgLLTLLARRIKDWRALDKVPAE 135
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 145 TvhsFAQRRLGPEVASLAMDSLCRGVFAGNSRELS---------IRScfpslfqaeqthRSillglllgagrtpqpDSAL 215
Cdd:PRK07233 136 E---WLRRWSGEGVYEVFWEPLLESKFGDYADDVSaawlwsrikRRG------------NR---------------RYSL 185
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 216 IRQALAerwsqwSLRGGLEMLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSLRDSSLEADHVISAIPASVLSELL 295
Cdd:PRK07233 186 FGEKLG------YLEGGFATLIDALAEAIEARGGEIRLGTPVTSVVIDGGGVTGVEVDGEEEDFDAVISTAPPPILARLV 259
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 296 PAEAAPLARALSAITAVSVAVV------------------------------NL----QYQGAHLpVQVMlggSWLQTle 341
Cdd:PRK07233 260 PDLPADVLARLRRIDYQGVVCMvlklrrpltdyywlnindpgapfggviehtNLvppeRYGGEHL-VYLP---KYLPG-- 333
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 342 asgcvlSQELFQQRAQEAAATQL-GLKEMPSHcL-------VHLHKN--CIPQYTLGHwqklesaRQFLTAHRLP---LT 408
Cdd:PRK07233 334 ------DHPLWQMSDEELLDRFLsYLRKMFPD-FdrddvraVRISRApyAQPIYEPGY-------LDKIPPYDTPiegLY 399
|
490 500 510
....*....|....*....|....*....|....*
gi 1678214321 409 LAGAS---YEGVAVNDCIESGRQAAVSVLGTEPNS 440
Cdd:PRK07233 400 LAGMSqiyPEDRSINGSVRAGRRVAREILEDRRNA 434
|
|
| NAD_binding_8 |
pfam13450 |
NAD(P)-binding Rossmann-like domain; |
7-73 |
1.55e-09 |
|
NAD(P)-binding Rossmann-like domain;
Pssm-ID: 433218 [Multi-domain] Cd Length: 67 Bit Score: 53.69 E-value: 1.55e-09
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1678214321 7 VLGGGISGLAASYHLSRAPCppKVVLVESSERLGGWIRSVRgPNGAIFELGPRGIRPAGALGARTLL 73
Cdd:pfam13450 1 IVGAGLAGLVAAALLAKRGF--RVLVLEKRDRLGGNAYSYR-VPGYVFDYGAHIFHGSDEPNVRDLL 64
|
|
| PLN02268 |
PLN02268 |
probable polyamine oxidase |
4-43 |
8.06e-06 |
|
probable polyamine oxidase
Pssm-ID: 177909 [Multi-domain] Cd Length: 435 Bit Score: 47.76 E-value: 8.06e-06
10 20 30 40
....*....|....*....|....*....|....*....|
gi 1678214321 4 TVVVLGGGISGLAASYHLSRAPCppKVVLVESSERLGGWI 43
Cdd:PLN02268 2 SVIVIGGGIAGIAAARALHDASF--KVTLLESRDRIGGRV 39
|
|
| PRK07208 |
PRK07208 |
hypothetical protein; Provisional |
1-308 |
9.55e-06 |
|
hypothetical protein; Provisional
Pssm-ID: 235967 [Multi-domain] Cd Length: 479 Bit Score: 47.58 E-value: 9.55e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 1 MGRTVVVLGGGISGLAASYHLSRAPCPpkVVLVESSERLGGWIRSVRGpNGAIFELGprgirpagalGARTLLLVSE-LG 79
Cdd:PRK07208 3 NKKSVVIIGAGPAGLTAAYELLKRGYP--VTVLEADPVVGGISRTVTY-KGNRFDIG----------GHRFFSKSPEvMD 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 80 LDSEVLPVRgdhpaaqnRFL--------YVGGALHALPTGLRGLLRPSPP-------FSkpLFWAGLReltkPRgkEPDE 144
Cdd:PRK07208 70 LWNEILPDD--------DFLlrprlsriYYRGKFFDYPLKAFDALKNLGLwrtakcgAS--YLKARLR----PR--KEED 133
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 145 TVHSFAQRRLGPEVASLAMDSLCRGVFAGNSRELS-------IRSCfpSLFQAEqthRSILLGLLLGAGRTPQPDSALIR 217
Cdd:PRK07208 134 SFEDWVINRFGRRLYSTFFKGYTEKVWGVPCDEISadwaaqrIKGL--SLGKAI---RNALRRSLGLKRRNKEVETSLIE 208
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 218 QALAERWsqwslrgGLEMLPQALETHLTSRGVSVLRGQPVCGLSLQAEGR-WKVSLRDS-----SLEADHVISAIPASVL 291
Cdd:PRK07208 209 EFRYPKL-------GPGQLWETAAEKLEALGGKVVLNAKVVGLHHDGDGRiAVVVVNDTdgteeTVTADQVISSMPLREL 281
|
330
....*....|....*..
gi 1678214321 292 SELLPAEAAPLARALSA 308
Cdd:PRK07208 282 VAALDPPPPPEVRAAAA 298
|
|
| HpnE |
TIGR03467 |
squalene-associated FAD-dependent desaturase; The sequences in this family are members of the ... |
244-334 |
2.44e-05 |
|
squalene-associated FAD-dependent desaturase; The sequences in this family are members of the pfam01593 superfamily of flavin-containing amine oxidases which include the phytoene desaturases. These sequences also include a FAD-dependent oxidoreductase domain, pfam01266. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of squalene, the condensation product of the polyisoprenoid farnesyl pyrophosphate. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnE was assigned. This gene is also found in contexts where the downstream conversion of squalene to hopenes is not evidence. The precise nature of the reaction catalyzed by this enzyme is unknown at this time.
Pssm-ID: 274593 [Multi-domain] Cd Length: 419 Bit Score: 46.20 E-value: 2.44e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 244 LTSRGVSVLRGQPVCGLSLQAEG-RWKVSLRDSSLEADHVISAIPASVLSELLPAEAAPlaRALSAITAVSVAVVNLQYQ 322
Cdd:TIGR03467 207 LDSRGGEVRLGTRVRSIEANAGGiRALVRSGGETLPADAVVLAVPPRHAASLLPGEDLG--ALLTALGYSPITTVHLRLD 284
|
90
....*....|....*
gi 1678214321 323 GA---HLPVQVMLGG 334
Cdd:TIGR03467 285 RAvrlPAPMVGLVGG 299
|
|
| Ppro0129 |
COG2907 |
Predicted flavin-containing amine oxidase [General function prediction only]; |
1-41 |
3.58e-05 |
|
Predicted flavin-containing amine oxidase [General function prediction only];
Pssm-ID: 442151 [Multi-domain] Cd Length: 423 Bit Score: 45.88 E-value: 3.58e-05
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 1678214321 1 MGRTVVVLGGGISGLAASYHLSRApcpPKVVLVESSERLGG 41
Cdd:COG2907 2 ARMRIAVIGSGISGLTAAWLLSRR---HDVTLFEANDRLGG 39
|
|
| CzcO |
COG2072 |
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ... |
5-42 |
6.06e-05 |
|
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];
Pssm-ID: 441675 [Multi-domain] Cd Length: 414 Bit Score: 45.24 E-value: 6.06e-05
10 20 30
....*....|....*....|....*....|....*....
gi 1678214321 5 VVVLGGGISGLAASYHLSRApCPPkVVLVESSERLGG-W 42
Cdd:COG2072 9 VVVIGAGQAGLAAAYHLRRA-GID-FVVLEKADDVGGtW 45
|
|
| HdrA |
COG1148 |
Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion]; |
3-44 |
9.08e-05 |
|
Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion];
Pssm-ID: 440762 [Multi-domain] Cd Length: 563 Bit Score: 44.85 E-value: 9.08e-05
10 20 30 40
....*....|....*....|....*....|....*....|..
gi 1678214321 3 RTVVVLGGGISGLAASYHLSRAPCppKVVLVESSERLGGWIR 44
Cdd:COG1148 141 KRALVIGGGIAGMTAALELAEQGY--EVYLVEKEPELGGRAA 180
|
|
| DadA |
COG0665 |
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]; |
5-81 |
7.21e-04 |
|
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
Pssm-ID: 440429 [Multi-domain] Cd Length: 364 Bit Score: 41.43 E-value: 7.21e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678214321 5 VVVLGGGISGLAASYHLSRAPCppKVVLVE-------SSERLGGWIRSvrgpngAIFELGPRGIRPAGALGARTLL-LVS 76
Cdd:COG0665 5 VVVIGGGIAGLSTAYHLARRGL--DVTVLErgrpgsgASGRNAGQLRP------GLAALADRALVRLAREALDLWReLAA 76
|
....*
gi 1678214321 77 ELGLD 81
Cdd:COG0665 77 ELGID 81
|
|
| DAO |
pfam01266 |
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ... |
5-41 |
8.27e-04 |
|
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.
Pssm-ID: 426168 [Multi-domain] Cd Length: 339 Bit Score: 41.23 E-value: 8.27e-04
10 20 30
....*....|....*....|....*....|....*..
gi 1678214321 5 VVVLGGGISGLAASYHLSRApcPPKVVLVESSERLGG 41
Cdd:pfam01266 2 VVVIGGGIVGLSTAYELARR--GLSVTLLERGDDPGS 36
|
|
| YdhS |
COG4529 |
Uncharacterized NAD(P)/FAD-binding protein YdhS [General function prediction only]; |
3-40 |
3.62e-03 |
|
Uncharacterized NAD(P)/FAD-binding protein YdhS [General function prediction only];
Pssm-ID: 443597 [Multi-domain] Cd Length: 466 Bit Score: 39.55 E-value: 3.62e-03
10 20 30
....*....|....*....|....*....|....*....
gi 1678214321 3 RTVVVLGGGISGLAASYHLSR-APCPPKVVLVESSERLG 40
Cdd:COG4529 6 KRIAIIGGGASGTALAIHLLRrAPEPLRITLFEPRPELG 44
|
|
| PRK12771 |
PRK12771 |
putative glutamate synthase (NADPH) small subunit; Provisional |
2-44 |
4.76e-03 |
|
putative glutamate synthase (NADPH) small subunit; Provisional
Pssm-ID: 237198 [Multi-domain] Cd Length: 564 Bit Score: 39.09 E-value: 4.76e-03
10 20 30 40
....*....|....*....|....*....|....*....|...
gi 1678214321 2 GRTVVVLGGGISGLAASYHLSRApcPPKVVLVESSERLGGWIR 44
Cdd:PRK12771 137 GKRVAVIGGGPAGLSAAYHLRRM--GHAVTIFEAGPKLGGMMR 177
|
|
| |
