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Conserved domains on  [gi|1409135282|ref|NP_001351548|]
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zinc finger protein 420 [Mus musculus]

Protein Classification

C2H2-type zinc finger protein( domain architecture ID 11473154)

Cys2His2 (C2H2)-type zinc finger protein may be involved in transcriptional regulation

CATH:  3.30.160.60
Gene Ontology:  GO:0008270|GO:0003677
PubMed:  11361095|22803940|11179890|12665246|10940247
SCOP:  4003583

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
23-462 3.38e-20

FOG: Zn-finger [General function prediction only];


:

Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 93.61  E-value: 3.38e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409135282  23 YSTEKPYKCEECGKAFRRASHLSQHQSIHTGEKPYEC--KQCGKAFSRDSQLSLHQRLHTGekpytckecGKAFTQSSQL 100
Cdd:COG5048    28 SNAPRPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCsySGCDKSFSRPLELSRHLRTHHN---------NPSDLNSKSL 98

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409135282 101 ILHHRIHTGEKPykcEACGKAFIRSSQLSRHQKVHTGEKPFECKECgkaftQNSQLTLHQrlhtgekLYDCKECRKVFTQ 180
Cdd:COG5048    99 PLSNSKASSSSL---SSSSSNSNDNNLLSSHSLPPSSRDPQLPDLL-----SISNLRNNP-------LPGNNSSSVNTPQ 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409135282 181 -LSQLILHRRIHTGEKPYECNecgkaficgSQLSQHRKIHNGEKPYECKECGKAFIRGSLLmQHQRIHTGEKPYKCDECG 259
Cdd:COG5048   164 sNSLHPPLPANSLSKDPSSNL---------SLLISSNVSTSIPSSSENSPLSSSYSIPSSS-SDQNLENSSSSLPLTTNS 233

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409135282 260 kaFIRGSQLTQHQRVHTNeKPYECKECGKTFSHGSQLTQHQRIH----------TGEKPYQCKECGKAFNRGSLLTRHQR 329
Cdd:COG5048   234 --QLSPKSLLSQSPSSLS-SSDSSSSASESPRSSLPTASSQSSSpnesdsssekGFSLPIKSKQCNISFSRSSPLTRHLR 310

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409135282 330 --IHTGE--KPYKCKE--CGKNFSRGSELTQHERIHTGEKPYECKEC-------GKSFIRGSQLTQHQRIHTGEKPYEC- 395
Cdd:COG5048   311 svNHSGEslKPFSCPYslCGKLFSRNDALKRHILLHTSISPAKEKLLnssskfsPLLNNEPPQSLQQYKDLKNDKKSETl 390

                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409135282 396 -KECRMAFTQSSHLSQHQRLHTGEKPYVC--SECGKAFARGLLLIQHQRIHTGEKPYQCRECGKAFIRSS 462
Cdd:COG5048   391 sNSCIRNFKRDSNLSLHIITHLSFRPYNCknPPCSKSFNRHYNLIPHKKIHTNHAPLLCSILKSFRRDLD 460
zf-H2C2_2 pfam13465
Zinc-finger double domain;
519-544 6.37e-04

Zinc-finger double domain;


:

Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 37.35  E-value: 6.37e-04
                          10        20
                  ....*....|....*....|....*.
gi 1409135282 519 HLSRHQRVHTGEKPYQCKECEKAFTR 544
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
464-486 2.95e-03

Zinc-finger double domain;


:

Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.42  E-value: 2.95e-03
                          10        20
                  ....*....|....*....|...
gi 1409135282 464 LTQHQRTHTGEKPYECRECGKAF 486
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSF 24
 
Name Accession Description Interval E-value
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
23-462 3.38e-20

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 93.61  E-value: 3.38e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409135282  23 YSTEKPYKCEECGKAFRRASHLSQHQSIHTGEKPYEC--KQCGKAFSRDSQLSLHQRLHTGekpytckecGKAFTQSSQL 100
Cdd:COG5048    28 SNAPRPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCsySGCDKSFSRPLELSRHLRTHHN---------NPSDLNSKSL 98

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409135282 101 ILHHRIHTGEKPykcEACGKAFIRSSQLSRHQKVHTGEKPFECKECgkaftQNSQLTLHQrlhtgekLYDCKECRKVFTQ 180
Cdd:COG5048    99 PLSNSKASSSSL---SSSSSNSNDNNLLSSHSLPPSSRDPQLPDLL-----SISNLRNNP-------LPGNNSSSVNTPQ 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409135282 181 -LSQLILHRRIHTGEKPYECNecgkaficgSQLSQHRKIHNGEKPYECKECGKAFIRGSLLmQHQRIHTGEKPYKCDECG 259
Cdd:COG5048   164 sNSLHPPLPANSLSKDPSSNL---------SLLISSNVSTSIPSSSENSPLSSSYSIPSSS-SDQNLENSSSSLPLTTNS 233

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409135282 260 kaFIRGSQLTQHQRVHTNeKPYECKECGKTFSHGSQLTQHQRIH----------TGEKPYQCKECGKAFNRGSLLTRHQR 329
Cdd:COG5048   234 --QLSPKSLLSQSPSSLS-SSDSSSSASESPRSSLPTASSQSSSpnesdsssekGFSLPIKSKQCNISFSRSSPLTRHLR 310

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409135282 330 --IHTGE--KPYKCKE--CGKNFSRGSELTQHERIHTGEKPYECKEC-------GKSFIRGSQLTQHQRIHTGEKPYEC- 395
Cdd:COG5048   311 svNHSGEslKPFSCPYslCGKLFSRNDALKRHILLHTSISPAKEKLLnssskfsPLLNNEPPQSLQQYKDLKNDKKSETl 390

                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409135282 396 -KECRMAFTQSSHLSQHQRLHTGEKPYVC--SECGKAFARGLLLIQHQRIHTGEKPYQCRECGKAFIRSS 462
Cdd:COG5048   391 sNSCIRNFKRDSNLSLHIITHLSFRPYNCknPPCSKSFNRHYNLIPHKKIHTNHAPLLCSILKSFRRDLD 460
zf-H2C2_2 pfam13465
Zinc-finger double domain;
240-264 3.43e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 38.12  E-value: 3.43e-04
                          10        20
                  ....*....|....*....|....*
gi 1409135282 240 LMQHQRIHTGEKPYKCDECGKAFIR 264
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
519-544 6.37e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 37.35  E-value: 6.37e-04
                          10        20
                  ....*....|....*....|....*.
gi 1409135282 519 HLSRHQRVHTGEKPYQCKECEKAFTR 544
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
464-486 2.95e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.42  E-value: 2.95e-03
                          10        20
                  ....*....|....*....|...
gi 1409135282 464 LTQHQRTHTGEKPYECRECGKAF 486
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSF 24
 
Name Accession Description Interval E-value
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
23-462 3.38e-20

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 93.61  E-value: 3.38e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409135282  23 YSTEKPYKCEECGKAFRRASHLSQHQSIHTGEKPYEC--KQCGKAFSRDSQLSLHQRLHTGekpytckecGKAFTQSSQL 100
Cdd:COG5048    28 SNAPRPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCsySGCDKSFSRPLELSRHLRTHHN---------NPSDLNSKSL 98

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409135282 101 ILHHRIHTGEKPykcEACGKAFIRSSQLSRHQKVHTGEKPFECKECgkaftQNSQLTLHQrlhtgekLYDCKECRKVFTQ 180
Cdd:COG5048    99 PLSNSKASSSSL---SSSSSNSNDNNLLSSHSLPPSSRDPQLPDLL-----SISNLRNNP-------LPGNNSSSVNTPQ 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409135282 181 -LSQLILHRRIHTGEKPYECNecgkaficgSQLSQHRKIHNGEKPYECKECGKAFIRGSLLmQHQRIHTGEKPYKCDECG 259
Cdd:COG5048   164 sNSLHPPLPANSLSKDPSSNL---------SLLISSNVSTSIPSSSENSPLSSSYSIPSSS-SDQNLENSSSSLPLTTNS 233

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409135282 260 kaFIRGSQLTQHQRVHTNeKPYECKECGKTFSHGSQLTQHQRIH----------TGEKPYQCKECGKAFNRGSLLTRHQR 329
Cdd:COG5048   234 --QLSPKSLLSQSPSSLS-SSDSSSSASESPRSSLPTASSQSSSpnesdsssekGFSLPIKSKQCNISFSRSSPLTRHLR 310

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409135282 330 --IHTGE--KPYKCKE--CGKNFSRGSELTQHERIHTGEKPYECKEC-------GKSFIRGSQLTQHQRIHTGEKPYEC- 395
Cdd:COG5048   311 svNHSGEslKPFSCPYslCGKLFSRNDALKRHILLHTSISPAKEKLLnssskfsPLLNNEPPQSLQQYKDLKNDKKSETl 390

                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409135282 396 -KECRMAFTQSSHLSQHQRLHTGEKPYVC--SECGKAFARGLLLIQHQRIHTGEKPYQCRECGKAFIRSS 462
Cdd:COG5048   391 sNSCIRNFKRDSNLSLHIITHLSFRPYNCknPPCSKSFNRHYNLIPHKKIHTNHAPLLCSILKSFRRDLD 460
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
139-563 1.69e-13

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 72.81  E-value: 1.69e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409135282 139 KPFECKECGKAFTQNSQLTLHQRLHTGEKLYDC--KECRKVFTQLSQLILHRRIHTGEKpyecnecgkaficgSQLSQHR 216
Cdd:COG5048    32 RPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCsySGCDKSFSRPLELSRHLRTHHNNP--------------SDLNSKS 97

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409135282 217 KIHNGEKPYECKE--CGKAFIRGSLLMQHQRIHTGEKPYKCDECGKAFIRGSQLTQHQRVHTNEK-------PYECKECG 287
Cdd:COG5048    98 LPLSNSKASSSSLssSSSNSNDNNLLSSHSLPPSSRDPQLPDLLSISNLRNNPLPGNNSSSVNTPqsnslhpPLPANSLS 177

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409135282 288 KTFSHGSQLTQHQRIHTGEKPYQCKECGKAFNRGSLLTRHQRIHTGEKPYKCKECGKNFSRGSELTQHERIHTGEKPYEC 367
Cdd:COG5048   178 KDPSSNLSLLISSNVSTSIPSSSENSPLSSSYSIPSSSSDQNLENSSSSLPLTTNSQLSPKSLLSQSPSSLSSSDSSSSA 257

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409135282 368 KECGKSF--IRGSQLTQHQRIHTGE-----KPYECKECRMAFTQSSHLSQHQRlhtgekpyvcsecgkafargllliqhQ 440
Cdd:COG5048   258 SESPRSSlpTASSQSSSPNESDSSSekgfsLPIKSKQCNISFSRSSPLTRHLR--------------------------S 311

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409135282 441 RIHTGE--KPYQCRE--CGKAFIRSSQLTQHQRTHTGEKPYEC--RECGKAFGHGS-----QLTLHQRVHTGEKPYEC-- 507
Cdd:COG5048   312 VNHSGEslKPFSCPYslCGKLFSRNDALKRHILLHTSISPAKEklLNSSSKFSPLLnneppQSLQQYKDLKNDKKSETls 391

                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1409135282 508 KECRKAFTQSSHLSRHQRVHTGEKPYQCK--ECEKAFTRESQLMRHQRIHIRGKSLDC 563
Cdd:COG5048   392 NSCIRNFKRDSNLSLHIITHLSFRPYNCKnpPCSKSFNRHYNLIPHKKIHTNHAPLLC 449
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
27-187 2.35e-06

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 50.08  E-value: 2.35e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409135282  27 KPYKCEECGKAFRRASHLSQHQ--SIHTGE--KPYEC--KQCGKAFSRDSQLSLHQRLHTGEKPYTCK--ECGKAFTQSS 98
Cdd:COG5048   288 LPIKSKQCNISFSRSSPLTRHLrsVNHSGEslKPFSCpySLCGKLFSRNDALKRHILLHTSISPAKEKllNSSSKFSPLL 367

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409135282  99 -----QLILHHRIHTGEKPYKCE--ACGKAFIRSSQLSRHQKVHTGEKP--FECKECGKAFTQNSQLTLHQRLHTgEKLY 169
Cdd:COG5048   368 nneppQSLQQYKDLKNDKKSETLsnSCIRNFKRDSNLSLHIITHLSFRPynCKNPPCSKSFNRHYNLIPHKKIHT-NHAP 446

                         170
                  ....*....|....*...
gi 1409135282 170 DCKECRKVFTQLSQLILH 187
Cdd:COG5048   447 LLCSILKSFRRDLDLSNH 464
zf-H2C2_2 pfam13465
Zinc-finger double domain;
240-264 3.43e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 38.12  E-value: 3.43e-04
                          10        20
                  ....*....|....*....|....*
gi 1409135282 240 LMQHQRIHTGEKPYKCDECGKAFIR 264
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
519-544 6.37e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 37.35  E-value: 6.37e-04
                          10        20
                  ....*....|....*....|....*.
gi 1409135282 519 HLSRHQRVHTGEKPYQCKECEKAFTR 544
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
351-376 8.81e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 36.97  E-value: 8.81e-04
                          10        20
                  ....*....|....*....|....*.
gi 1409135282 351 ELTQHERIHTGEKPYECKECGKSFIR 376
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
296-320 9.07e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 36.97  E-value: 9.07e-04
                          10        20
                  ....*....|....*....|....*
gi 1409135282 296 LTQHQRIHTGEKPYQCKECGKAFNR 320
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
128-152 1.37e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 36.20  E-value: 1.37e-03
                          10        20
                  ....*....|....*....|....*
gi 1409135282 128 LSRHQKVHTGEKPFECKECGKAFTQ 152
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
324-348 1.44e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 36.20  E-value: 1.44e-03
                          10        20
                  ....*....|....*....|....*
gi 1409135282 324 LTRHQRIHTGEKPYKCKECGKNFSR 348
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFKS 26
SFP1 COG5189
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 119-217 2.57e-03

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 40.47  E-value: 2.57e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1409135282 119 GKAFIRSSqlSRHQKVhTGEKPFECK--ECGKAFTQNSQLTLHqRLHtgeklydcKECRKVFTQLSQLILHRRIHTGEKP 196
Cdd:COG5189   331 GERNIDTP--SRMLKV-KDGKPYKCPveGCNKKYKNQNGLKYH-MLH--------GHQNQKLHENPSPEKMNIFSAKDKP 398

                          90       100
                  ....*....|....*....|.
gi 1409135282 197 YECNECGKAFICGSQLSQHRK 217
Cdd:COG5189   399 YRCEVCDKRYKNLNGLKYHRK 419
zf-H2C2_2 pfam13465
Zinc-finger double domain;
407-432 2.62e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.42  E-value: 2.62e-03
                          10        20
                  ....*....|....*....|....*.
gi 1409135282 407 HLSQHQRLHTGEKPYVCSECGKAFAR 432
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
436-460 2.70e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.42  E-value: 2.70e-03
                          10        20
                  ....*....|....*....|....*
gi 1409135282 436 LIQHQRIHTGEKPYQCRECGKAFIR 460
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
464-486 2.95e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.42  E-value: 2.95e-03
                          10        20
                  ....*....|....*....|...
gi 1409135282 464 LTQHQRTHTGEKPYECRECGKAF 486
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSF 24
zf-H2C2_2 pfam13465
Zinc-finger double domain;
43-68 4.20e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.04  E-value: 4.20e-03
                          10        20
                  ....*....|....*....|....*.
gi 1409135282  43 HLSQHQSIHTGEKPYECKQCGKAFSR 68
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
380-404 4.33e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.04  E-value: 4.33e-03
                          10        20
                  ....*....|....*....|....*
gi 1409135282 380 LTQHQRIHTGEKPYECKECRMAFTQ 404
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
268-292 6.16e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 34.27  E-value: 6.16e-03
                          10        20
                  ....*....|....*....|....*
gi 1409135282 268 LTQHQRVHTNEKPYECKECGKTFSH 292
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
72-96 9.13e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 33.88  E-value: 9.13e-03
                          10        20
                  ....*....|....*....|....*
gi 1409135282  72 LSLHQRLHTGEKPYTCKECGKAFTQ 96
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFKS 26
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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