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histone deacetylase complex subunit SAP130 isoform 2 [Mus musculus]
Protein Classification
List of domain hits
Name
Accession
Description
Interval
E-value
SAP130_C
pfam16014
Histone deacetylase complex subunit SAP130 C-terminus;
635-1040
0e+00
Histone deacetylase complex subunit SAP130 C-terminus;
:Pssm-ID: 464973 [Multi-domain]
Cd Length: 371
Bit Score: 549.15
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 635 A Q GSSPRPSILRKKPAT D G mavrktllppqppdvatprvessmrsasgsprpag AKPK SEV HV SI A T PVTV SL E TISN QN 714
Cdd:pfam16014 1 A L GSSPRPSILRKKPAT E G ----------------------------------- AKPK PDI HV AV A P PVTV AV E ALPG QN 45
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 715 A EQ P T VAVP P TA Q Q P PPT IP SMI A A A S PPSQP AIA LST I P G A VP VTPP ---- ITTIA A T PT LS A p VGG T PSTVLGPPV PE 790
Cdd:pfam16014 46 S EQ Q T ASAS P PS Q H P AQA IP TIL A P A A PPSQP SVV LST L P A A MA VTPP ipas MANVV A P PT QP A - ASS T AACAVSSVL PE 124
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 791 IK V K E EAEP V D ITR pvs T VPPL ATNTV SP S L AL LA S NLS M P PS DL P PGASPRKKPRKQQHVISTEEG D MMETNSTD D EKS 870
Cdd:pfam16014 125 IK I K Q EAEP M D TSQ --- S VPPL TPTSI SP A L TS LA N NLS V P AG DL L PGASPRKKPRKQQHVISTEEG E MMETNSTD E EKS 201
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 871 A A K S L LVK AEKRKSPPKEYIDEEGVRYVPVRPRPPITLLRHYRNPWKAAYHHFQRYSDVRVKEEKK AM LQ EI ANQKGV S C 950
Cdd:pfam16014 202 A P K P L TSR AEKRKSPPKEYIDEEGVRYVPVRPRPPITLLRHYRNPWKAAYHHFQRYSDVRVKEEKK GT LQ DM ANQKGV T C 281
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 951 RAQGWK V HLCAAQLLQLTNLEHDVY E RLT N LQEG I IPKKKA A TDDDLHRINELIQGNMQRCKLVMDQI S EARDSM L KVLD 1030
Cdd:pfam16014 282 RAQGWK I HLCAAQLLQLTNLEHDVY S RLT T LQEG L IPKKKA G TDDDLHRINELIQGNMQRCKLVMDQI T EARDSM M KVLD 361
410
....*....|
gi 1274095713 1031 HKDRVLKLLN 1040
Cdd:pfam16014 362 HKDRVLKLLN 371
PHA03247 super family
cl33720
large tegument protein UL36; Provisional
417-886
1.20e-06
large tegument protein UL36; Provisional
The actual alignment was detected with superfamily member PHA03247 :Pssm-ID: 223021 [Multi-domain]
Cd Length: 3151
Bit Score: 53.02
E-value: 1.20e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 417 PRIQPDY PPER SSLI P i SGH R A S PNPV A METRNDNRP S V P V Q fqyfl PTYPPS A Y P laah T YTPI TS SVSTIRQY P VSAQ 496
Cdd:PHA03247 2641 HPPPTVP PPER PRDD P - APG R V S RPRR A RRLGRAAQA S S P P Q ----- RPRRRA A R P ---- T VGSL TS LADPPPPP P TPEP 2710
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 497 AP NSTIT A qtgvgvastvhl N P MQLMTVD A SH A RHIQGIQ PAP ISTQGIQPA P I G tsgiq PA PIGT P GIHSAA P INTQGL 576
Cdd:PHA03247 2711 AP HALVS A ------------ T P LPPGPAA A RQ A SPALPAA PAP PAVPAGPAT P G G ----- PA RPAR P PTTAGP P APAPPA 2773
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 577 Q PAA manq Q P QPEGKTS AV VLADGAT iva NPISN P FSA A PAATT V VQTHSQSASTNT PA QGSS P RP S ILRKK P AT dgmav 656
Cdd:PHA03247 2774 A PAA ---- G P PRRLTRP AV ASLSESR --- ESLPS P WDP A DPPAA V LAPAAALPPAAS PA GPLP P PT S AQPTA P PP ----- 2841
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 657 rktll PP Q PP DVAT P R ---- VESSMRSASGSP R PAG AKP KSEVHVSIATPVTVSLET i S NQNAEQ P TVAVPPTA Q QPP P T 732
Cdd:PHA03247 2842 ----- PP G PP PPSL P L ggsv APGGDVRRRPPS R SPA AKP AAPARPPVRRLARPAVSR - S TESFAL P PDQPERPP Q PQA P P 2915
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 733 I P SMIAAAS PP S QP AIALSTI P GAV P VTP P I T TI A ATP tls A P V G GT P STV LG P ------ P VP EIK V KEE A EPVDI tr P V 806
Cdd:PHA03247 2916 P P QPQPQPP PP P QP QPPPPPP P RPQ P PLA P T T DP A GAG --- E P S G AV P QPW LG A lvpgrv A VP RFR V PQP A PSREA -- P A 2990
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 807 S TV PPL a T NTVSPSLALL AS N L SMPPSDL PP GA S prkkp R KQ QHVIS -- TE EG D MMETNST D D E K S AAKS L LVKAEKRKS 884
Cdd:PHA03247 2991 S ST PPL - T GHSLSRVSSW AS S L ALHEETD PP PV S ----- L KQ TLWPP dd TE DS D ADSLFDS D S E R S DLEA L DPLPPEPHD 3064
..
gi 1274095713 885 P P 886
Cdd:PHA03247 3065 P F 3066
PHA03247 super family
cl33720
large tegument protein UL36; Provisional
98-492
1.18e-04
large tegument protein UL36; Provisional
The actual alignment was detected with superfamily member PHA03247 :Pssm-ID: 223021 [Multi-domain]
Cd Length: 3151
Bit Score: 46.47
E-value: 1.18e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 98 PP AH L T PA --------- VP LSFSEGLMKP P PKPTMPS RP I AP APPSTMSL P PKVP G QVTVTMES S - I P QASAI P VATISG 167
Cdd:PHA03247 2551 PP PP L P PA appaapdrs VP PPRPAPRPSE P AVTSRAR RP D AP PQSARPRA P VDDR G DPRGPAPP S p L P PDTHA P DPPPPS 2630
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 168 QQGHPSNLHHIMTTN V QMSIIRSNA P G P P ------------ LHIG AS HL P RGAAAA A VMSS - SKV T TVLR P TSQL P NAAT 234
Cdd:PHA03247 2631 PSPAANEPDPHPPPT V PPPERPRDD P A P G rvsrprrarrlg RAAQ AS SP P QRPRRR A ARPT v GSL T SLAD P PPPP P TPEP 2710
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 235 A QP A VQHLIHQ P IQSRPPVTT S STI P P A VVATVSATRAQS P V - ITTT A AHAADSTLSR P TLSIQHPPSAAISIQ RPA QSR 313
Cdd:PHA03247 2711 A PH A LVSATPL P PGPAAARQA S PAL P A A PAPPAVPAGPAT P G g PARP A RPPTTAGPPA P APPAAPAAGPPRRLT RPA VAS 2790
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 314 DVTT R IT LPS ------ H PA LGTPKQQLHTM A QKTIFSTGT P VA A ATV AP ILATNTL P STTTA G SVSHTQAP tsti V TMTM 387
Cdd:PHA03247 2791 LSES R ES LPS pwdpad P PA AVLAPAAALPP A ASPAGPLPP P TS A QPT AP PPPPGPP P PSLPL G GSVAPGGD ---- V RRRP 2866
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 388 PS H S SH A TAVTTSNI PV AKV vpqqithts P R IQPDYPP E RSS L I P ISGH R ASPNPVAMETRNDNR P SV P V Q F Q YFL P TY P 467
Cdd:PHA03247 2867 PS R S PA A KPAAPARP PV RRL --------- A R PAVSRST E SFA L P P DQPE R PPQPQAPPPPQPQPQ P PP P P Q P Q PPP P PP P 2937
410 420
....*....|....*....|....*
gi 1274095713 468 PSAY PLA AH T YTPITSSV S TIRQY P 492
Cdd:PHA03247 2938 RPQP PLA PT T DPAGAGEP S GAVPQ P 2962
Name
Accession
Description
Interval
E-value
SAP130_C
pfam16014
Histone deacetylase complex subunit SAP130 C-terminus;
635-1040
0e+00
Histone deacetylase complex subunit SAP130 C-terminus;
Pssm-ID: 464973 [Multi-domain]
Cd Length: 371
Bit Score: 549.15
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 635 A Q GSSPRPSILRKKPAT D G mavrktllppqppdvatprvessmrsasgsprpag AKPK SEV HV SI A T PVTV SL E TISN QN 714
Cdd:pfam16014 1 A L GSSPRPSILRKKPAT E G ----------------------------------- AKPK PDI HV AV A P PVTV AV E ALPG QN 45
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 715 A EQ P T VAVP P TA Q Q P PPT IP SMI A A A S PPSQP AIA LST I P G A VP VTPP ---- ITTIA A T PT LS A p VGG T PSTVLGPPV PE 790
Cdd:pfam16014 46 S EQ Q T ASAS P PS Q H P AQA IP TIL A P A A PPSQP SVV LST L P A A MA VTPP ipas MANVV A P PT QP A - ASS T AACAVSSVL PE 124
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 791 IK V K E EAEP V D ITR pvs T VPPL ATNTV SP S L AL LA S NLS M P PS DL P PGASPRKKPRKQQHVISTEEG D MMETNSTD D EKS 870
Cdd:pfam16014 125 IK I K Q EAEP M D TSQ --- S VPPL TPTSI SP A L TS LA N NLS V P AG DL L PGASPRKKPRKQQHVISTEEG E MMETNSTD E EKS 201
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 871 A A K S L LVK AEKRKSPPKEYIDEEGVRYVPVRPRPPITLLRHYRNPWKAAYHHFQRYSDVRVKEEKK AM LQ EI ANQKGV S C 950
Cdd:pfam16014 202 A P K P L TSR AEKRKSPPKEYIDEEGVRYVPVRPRPPITLLRHYRNPWKAAYHHFQRYSDVRVKEEKK GT LQ DM ANQKGV T C 281
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 951 RAQGWK V HLCAAQLLQLTNLEHDVY E RLT N LQEG I IPKKKA A TDDDLHRINELIQGNMQRCKLVMDQI S EARDSM L KVLD 1030
Cdd:pfam16014 282 RAQGWK I HLCAAQLLQLTNLEHDVY S RLT T LQEG L IPKKKA G TDDDLHRINELIQGNMQRCKLVMDQI T EARDSM M KVLD 361
410
....*....|
gi 1274095713 1031 HKDRVLKLLN 1040
Cdd:pfam16014 362 HKDRVLKLLN 371
PHA03247
PHA03247
large tegument protein UL36; Provisional
417-886
1.20e-06
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain]
Cd Length: 3151
Bit Score: 53.02
E-value: 1.20e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 417 PRIQPDY PPER SSLI P i SGH R A S PNPV A METRNDNRP S V P V Q fqyfl PTYPPS A Y P laah T YTPI TS SVSTIRQY P VSAQ 496
Cdd:PHA03247 2641 HPPPTVP PPER PRDD P - APG R V S RPRR A RRLGRAAQA S S P P Q ----- RPRRRA A R P ---- T VGSL TS LADPPPPP P TPEP 2710
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 497 AP NSTIT A qtgvgvastvhl N P MQLMTVD A SH A RHIQGIQ PAP ISTQGIQPA P I G tsgiq PA PIGT P GIHSAA P INTQGL 576
Cdd:PHA03247 2711 AP HALVS A ------------ T P LPPGPAA A RQ A SPALPAA PAP PAVPAGPAT P G G ----- PA RPAR P PTTAGP P APAPPA 2773
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 577 Q PAA manq Q P QPEGKTS AV VLADGAT iva NPISN P FSA A PAATT V VQTHSQSASTNT PA QGSS P RP S ILRKK P AT dgmav 656
Cdd:PHA03247 2774 A PAA ---- G P PRRLTRP AV ASLSESR --- ESLPS P WDP A DPPAA V LAPAAALPPAAS PA GPLP P PT S AQPTA P PP ----- 2841
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 657 rktll PP Q PP DVAT P R ---- VESSMRSASGSP R PAG AKP KSEVHVSIATPVTVSLET i S NQNAEQ P TVAVPPTA Q QPP P T 732
Cdd:PHA03247 2842 ----- PP G PP PPSL P L ggsv APGGDVRRRPPS R SPA AKP AAPARPPVRRLARPAVSR - S TESFAL P PDQPERPP Q PQA P P 2915
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 733 I P SMIAAAS PP S QP AIALSTI P GAV P VTP P I T TI A ATP tls A P V G GT P STV LG P ------ P VP EIK V KEE A EPVDI tr P V 806
Cdd:PHA03247 2916 P P QPQPQPP PP P QP QPPPPPP P RPQ P PLA P T T DP A GAG --- E P S G AV P QPW LG A lvpgrv A VP RFR V PQP A PSREA -- P A 2990
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 807 S TV PPL a T NTVSPSLALL AS N L SMPPSDL PP GA S prkkp R KQ QHVIS -- TE EG D MMETNST D D E K S AAKS L LVKAEKRKS 884
Cdd:PHA03247 2991 S ST PPL - T GHSLSRVSSW AS S L ALHEETD PP PV S ----- L KQ TLWPP dd TE DS D ADSLFDS D S E R S DLEA L DPLPPEPHD 3064
..
gi 1274095713 885 P P 886
Cdd:PHA03247 3065 P F 3066
PHA03247
PHA03247
large tegument protein UL36; Provisional
558-849
3.00e-06
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain]
Cd Length: 3151
Bit Score: 51.86
E-value: 3.00e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 558 AP IGTP G i HSAA P INTQG L Q P AAM A NQQ P Q P EGKTS A VVLADGATIVAN P ISN P FSAA pa A TTV V QTHSQSASTNTP AQ G 637
Cdd:PHA03247 2600 AP VDDR G - DPRG P APPSP L P P DTH A PDP P P P SPSPA A NEPDPHPPPTVP P PER P RDDP -- A PGR V SRPRRARRLGRA AQ A 2676
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 638 SSP r P SIL R KKP A TDGMAVRKT L LP P Q PP dvatprvessmrsasgs P RPAGAK P KSE V HVSIAT P VTVS leti SN Q NAEQ 717
Cdd:PHA03247 2677 SSP - P QRP R RRA A RPTVGSLTS L AD P P PP ----------------- P PTPEPA P HAL V SATPLP P GPAA ---- AR Q ASPA 2734
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 718 PTV A VP P T A QQPP P TI P SMI A AASP P SQP A IALSTI P G A V P VT -- P PIT T IA A TPT LS APVGGT PS TVLGPPV P EIKVKE 795
Cdd:PHA03247 2735 LPA A PA P P A VPAG P AT P GGP A RPAR P PTT A GPPAPA P P A A P AA gp P RRL T RP A VAS LS ESRESL PS PWDPADP P AAVLAP 2814
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 1274095713 796 E A EPVDITR P VSTV PP LATNT - VS P SLALLASNL S M P P - SDLP PG ASP R KK P RKQQ 849
Cdd:PHA03247 2815 A A ALPPAAS P AGPL PP PTSAQ p TA P PPPPGPPPP S L P L g GSVA PG GDV R RR P PSRS 2870
PHA03247
PHA03247
large tegument protein UL36; Provisional
98-492
1.18e-04
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain]
Cd Length: 3151
Bit Score: 46.47
E-value: 1.18e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 98 PP AH L T PA --------- VP LSFSEGLMKP P PKPTMPS RP I AP APPSTMSL P PKVP G QVTVTMES S - I P QASAI P VATISG 167
Cdd:PHA03247 2551 PP PP L P PA appaapdrs VP PPRPAPRPSE P AVTSRAR RP D AP PQSARPRA P VDDR G DPRGPAPP S p L P PDTHA P DPPPPS 2630
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 168 QQGHPSNLHHIMTTN V QMSIIRSNA P G P P ------------ LHIG AS HL P RGAAAA A VMSS - SKV T TVLR P TSQL P NAAT 234
Cdd:PHA03247 2631 PSPAANEPDPHPPPT V PPPERPRDD P A P G rvsrprrarrlg RAAQ AS SP P QRPRRR A ARPT v GSL T SLAD P PPPP P TPEP 2710
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 235 A QP A VQHLIHQ P IQSRPPVTT S STI P P A VVATVSATRAQS P V - ITTT A AHAADSTLSR P TLSIQHPPSAAISIQ RPA QSR 313
Cdd:PHA03247 2711 A PH A LVSATPL P PGPAAARQA S PAL P A A PAPPAVPAGPAT P G g PARP A RPPTTAGPPA P APPAAPAAGPPRRLT RPA VAS 2790
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 314 DVTT R IT LPS ------ H PA LGTPKQQLHTM A QKTIFSTGT P VA A ATV AP ILATNTL P STTTA G SVSHTQAP tsti V TMTM 387
Cdd:PHA03247 2791 LSES R ES LPS pwdpad P PA AVLAPAAALPP A ASPAGPLPP P TS A QPT AP PPPPGPP P PSLPL G GSVAPGGD ---- V RRRP 2866
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 388 PS H S SH A TAVTTSNI PV AKV vpqqithts P R IQPDYPP E RSS L I P ISGH R ASPNPVAMETRNDNR P SV P V Q F Q YFL P TY P 467
Cdd:PHA03247 2867 PS R S PA A KPAAPARP PV RRL --------- A R PAVSRST E SFA L P P DQPE R PPQPQAPPPPQPQPQ P PP P P Q P Q PPP P PP P 2937
410 420
....*....|....*....|....*
gi 1274095713 468 PSAY PLA AH T YTPITSSV S TIRQY P 492
Cdd:PHA03247 2938 RPQP PLA PT T DPAGAGEP S GAVPQ P 2962
Atrophin-1
pfam03154
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ...
453-829
4.23e-04
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain]
Cd Length: 991
Bit Score: 44.37
E-value: 4.23e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 453 P SVPV Q FQYFL P TY PP SAYPLA A H T YT P IT S SV S TIR Q - Y P VSA Q A PN S T I - TA QTGVGVAS T VH L N P MQ L MT vdashar 530
Cdd:pfam03154 172 P VLQA Q SGAAS P PS PP PPGTTQ A A T AG P TP S AP S VPP Q g S P ATS Q P PN Q T Q s TA APHTLIQQ T PT L H P QR L PS ------- 244
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 531 hiqgiq P A P ISTQGI QP A P IGTSGI QP A P ig T P GI H SAA P INTQG LQ PAAMAN Q Q P Q P E gktsavvladg ATIVAN P I S N 610
Cdd:pfam03154 245 ------ P H P PLQPMT QP P P PSQVSP QP L P -- Q P SL H GQM P PMPHS LQ TGPSHM Q H P V P P ----------- QPFPLT P Q S S 305
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 611 PFSAA P AATTVVQTH SQ SASTNT P A Q GSSPRPSIL R KK P ATDG - MAVRKTLL PP QP P DVAT P RVE S SMRSASG S ------ 683
Cdd:pfam03154 306 QSQVP P GPSPAAPGQ SQ QRIHTP P S Q SQLQSQQPP R EQ P LPPA p LSMPHIKP PP TT P IPQL P NPQ S HKHPPHL S gpspfq 385
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 684 ----- P R P AGA KP K S EV --- H VSI A T P VTVS L ETI S N Q ---- N A EQ P TVAVPPTAQQ P PPTI P SMIAAASP PSQ PAIAL - 750
Cdd:pfam03154 386 mnsnl P P P PAL KP L S SL sth H PPS A H P PPLQ L MPQ S Q Q lppp P A QP P VLTQSQSLPP P AASH P PTSGLHQV PSQ SPFPQ h 465
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 751 STI PG AV P V ----- T PP IT T IA A T P TLSA P VGGTP S T ------ VLGP P V P EIKV KEEA e PVDITR P V S TV PP LATNTVS P 819
Cdd:pfam03154 466 PFV PG GP P P itpps G PP TS T SS A M P GIQP P SSASV S S sgpvpa AVSC P L P PVQI KEEA - LDEAEE P E S PP PP PRSPSPE P 544
410
....*....|
gi 1274095713 820 SLALLA S NL S 829
Cdd:pfam03154 545 TVVNTP S HA S 554
Name
Accession
Description
Interval
E-value
SAP130_C
pfam16014
Histone deacetylase complex subunit SAP130 C-terminus;
635-1040
0e+00
Histone deacetylase complex subunit SAP130 C-terminus;
Pssm-ID: 464973 [Multi-domain]
Cd Length: 371
Bit Score: 549.15
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 635 A Q GSSPRPSILRKKPAT D G mavrktllppqppdvatprvessmrsasgsprpag AKPK SEV HV SI A T PVTV SL E TISN QN 714
Cdd:pfam16014 1 A L GSSPRPSILRKKPAT E G ----------------------------------- AKPK PDI HV AV A P PVTV AV E ALPG QN 45
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 715 A EQ P T VAVP P TA Q Q P PPT IP SMI A A A S PPSQP AIA LST I P G A VP VTPP ---- ITTIA A T PT LS A p VGG T PSTVLGPPV PE 790
Cdd:pfam16014 46 S EQ Q T ASAS P PS Q H P AQA IP TIL A P A A PPSQP SVV LST L P A A MA VTPP ipas MANVV A P PT QP A - ASS T AACAVSSVL PE 124
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 791 IK V K E EAEP V D ITR pvs T VPPL ATNTV SP S L AL LA S NLS M P PS DL P PGASPRKKPRKQQHVISTEEG D MMETNSTD D EKS 870
Cdd:pfam16014 125 IK I K Q EAEP M D TSQ --- S VPPL TPTSI SP A L TS LA N NLS V P AG DL L PGASPRKKPRKQQHVISTEEG E MMETNSTD E EKS 201
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 871 A A K S L LVK AEKRKSPPKEYIDEEGVRYVPVRPRPPITLLRHYRNPWKAAYHHFQRYSDVRVKEEKK AM LQ EI ANQKGV S C 950
Cdd:pfam16014 202 A P K P L TSR AEKRKSPPKEYIDEEGVRYVPVRPRPPITLLRHYRNPWKAAYHHFQRYSDVRVKEEKK GT LQ DM ANQKGV T C 281
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 951 RAQGWK V HLCAAQLLQLTNLEHDVY E RLT N LQEG I IPKKKA A TDDDLHRINELIQGNMQRCKLVMDQI S EARDSM L KVLD 1030
Cdd:pfam16014 282 RAQGWK I HLCAAQLLQLTNLEHDVY S RLT T LQEG L IPKKKA G TDDDLHRINELIQGNMQRCKLVMDQI T EARDSM M KVLD 361
410
....*....|
gi 1274095713 1031 HKDRVLKLLN 1040
Cdd:pfam16014 362 HKDRVLKLLN 371
PHA03247
PHA03247
large tegument protein UL36; Provisional
417-886
1.20e-06
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain]
Cd Length: 3151
Bit Score: 53.02
E-value: 1.20e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 417 PRIQPDY PPER SSLI P i SGH R A S PNPV A METRNDNRP S V P V Q fqyfl PTYPPS A Y P laah T YTPI TS SVSTIRQY P VSAQ 496
Cdd:PHA03247 2641 HPPPTVP PPER PRDD P - APG R V S RPRR A RRLGRAAQA S S P P Q ----- RPRRRA A R P ---- T VGSL TS LADPPPPP P TPEP 2710
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 497 AP NSTIT A qtgvgvastvhl N P MQLMTVD A SH A RHIQGIQ PAP ISTQGIQPA P I G tsgiq PA PIGT P GIHSAA P INTQGL 576
Cdd:PHA03247 2711 AP HALVS A ------------ T P LPPGPAA A RQ A SPALPAA PAP PAVPAGPAT P G G ----- PA RPAR P PTTAGP P APAPPA 2773
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 577 Q PAA manq Q P QPEGKTS AV VLADGAT iva NPISN P FSA A PAATT V VQTHSQSASTNT PA QGSS P RP S ILRKK P AT dgmav 656
Cdd:PHA03247 2774 A PAA ---- G P PRRLTRP AV ASLSESR --- ESLPS P WDP A DPPAA V LAPAAALPPAAS PA GPLP P PT S AQPTA P PP ----- 2841
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 657 rktll PP Q PP DVAT P R ---- VESSMRSASGSP R PAG AKP KSEVHVSIATPVTVSLET i S NQNAEQ P TVAVPPTA Q QPP P T 732
Cdd:PHA03247 2842 ----- PP G PP PPSL P L ggsv APGGDVRRRPPS R SPA AKP AAPARPPVRRLARPAVSR - S TESFAL P PDQPERPP Q PQA P P 2915
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 733 I P SMIAAAS PP S QP AIALSTI P GAV P VTP P I T TI A ATP tls A P V G GT P STV LG P ------ P VP EIK V KEE A EPVDI tr P V 806
Cdd:PHA03247 2916 P P QPQPQPP PP P QP QPPPPPP P RPQ P PLA P T T DP A GAG --- E P S G AV P QPW LG A lvpgrv A VP RFR V PQP A PSREA -- P A 2990
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 807 S TV PPL a T NTVSPSLALL AS N L SMPPSDL PP GA S prkkp R KQ QHVIS -- TE EG D MMETNST D D E K S AAKS L LVKAEKRKS 884
Cdd:PHA03247 2991 S ST PPL - T GHSLSRVSSW AS S L ALHEETD PP PV S ----- L KQ TLWPP dd TE DS D ADSLFDS D S E R S DLEA L DPLPPEPHD 3064
..
gi 1274095713 885 P P 886
Cdd:PHA03247 3065 P F 3066
PHA03247
PHA03247
large tegument protein UL36; Provisional
558-849
3.00e-06
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain]
Cd Length: 3151
Bit Score: 51.86
E-value: 3.00e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 558 AP IGTP G i HSAA P INTQG L Q P AAM A NQQ P Q P EGKTS A VVLADGATIVAN P ISN P FSAA pa A TTV V QTHSQSASTNTP AQ G 637
Cdd:PHA03247 2600 AP VDDR G - DPRG P APPSP L P P DTH A PDP P P P SPSPA A NEPDPHPPPTVP P PER P RDDP -- A PGR V SRPRRARRLGRA AQ A 2676
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 638 SSP r P SIL R KKP A TDGMAVRKT L LP P Q PP dvatprvessmrsasgs P RPAGAK P KSE V HVSIAT P VTVS leti SN Q NAEQ 717
Cdd:PHA03247 2677 SSP - P QRP R RRA A RPTVGSLTS L AD P P PP ----------------- P PTPEPA P HAL V SATPLP P GPAA ---- AR Q ASPA 2734
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 718 PTV A VP P T A QQPP P TI P SMI A AASP P SQP A IALSTI P G A V P VT -- P PIT T IA A TPT LS APVGGT PS TVLGPPV P EIKVKE 795
Cdd:PHA03247 2735 LPA A PA P P A VPAG P AT P GGP A RPAR P PTT A GPPAPA P P A A P AA gp P RRL T RP A VAS LS ESRESL PS PWDPADP P AAVLAP 2814
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 1274095713 796 E A EPVDITR P VSTV PP LATNT - VS P SLALLASNL S M P P - SDLP PG ASP R KK P RKQQ 849
Cdd:PHA03247 2815 A A ALPPAAS P AGPL PP PTSAQ p TA P PPPPGPPPP S L P L g GSVA PG GDV R RR P PSRS 2870
PHA03247
PHA03247
large tegument protein UL36; Provisional
98-492
1.18e-04
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain]
Cd Length: 3151
Bit Score: 46.47
E-value: 1.18e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 98 PP AH L T PA --------- VP LSFSEGLMKP P PKPTMPS RP I AP APPSTMSL P PKVP G QVTVTMES S - I P QASAI P VATISG 167
Cdd:PHA03247 2551 PP PP L P PA appaapdrs VP PPRPAPRPSE P AVTSRAR RP D AP PQSARPRA P VDDR G DPRGPAPP S p L P PDTHA P DPPPPS 2630
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 168 QQGHPSNLHHIMTTN V QMSIIRSNA P G P P ------------ LHIG AS HL P RGAAAA A VMSS - SKV T TVLR P TSQL P NAAT 234
Cdd:PHA03247 2631 PSPAANEPDPHPPPT V PPPERPRDD P A P G rvsrprrarrlg RAAQ AS SP P QRPRRR A ARPT v GSL T SLAD P PPPP P TPEP 2710
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 235 A QP A VQHLIHQ P IQSRPPVTT S STI P P A VVATVSATRAQS P V - ITTT A AHAADSTLSR P TLSIQHPPSAAISIQ RPA QSR 313
Cdd:PHA03247 2711 A PH A LVSATPL P PGPAAARQA S PAL P A A PAPPAVPAGPAT P G g PARP A RPPTTAGPPA P APPAAPAAGPPRRLT RPA VAS 2790
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 314 DVTT R IT LPS ------ H PA LGTPKQQLHTM A QKTIFSTGT P VA A ATV AP ILATNTL P STTTA G SVSHTQAP tsti V TMTM 387
Cdd:PHA03247 2791 LSES R ES LPS pwdpad P PA AVLAPAAALPP A ASPAGPLPP P TS A QPT AP PPPPGPP P PSLPL G GSVAPGGD ---- V RRRP 2866
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 388 PS H S SH A TAVTTSNI PV AKV vpqqithts P R IQPDYPP E RSS L I P ISGH R ASPNPVAMETRNDNR P SV P V Q F Q YFL P TY P 467
Cdd:PHA03247 2867 PS R S PA A KPAAPARP PV RRL --------- A R PAVSRST E SFA L P P DQPE R PPQPQAPPPPQPQPQ P PP P P Q P Q PPP P PP P 2937
410 420
....*....|....*....|....*
gi 1274095713 468 PSAY PLA AH T YTPITSSV S TIRQY P 492
Cdd:PHA03247 2938 RPQP PLA PT T DPAGAGEP S GAVPQ P 2962
Atrophin-1
pfam03154
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ...
453-829
4.23e-04
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain]
Cd Length: 991
Bit Score: 44.37
E-value: 4.23e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 453 P SVPV Q FQYFL P TY PP SAYPLA A H T YT P IT S SV S TIR Q - Y P VSA Q A PN S T I - TA QTGVGVAS T VH L N P MQ L MT vdashar 530
Cdd:pfam03154 172 P VLQA Q SGAAS P PS PP PPGTTQ A A T AG P TP S AP S VPP Q g S P ATS Q P PN Q T Q s TA APHTLIQQ T PT L H P QR L PS ------- 244
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 531 hiqgiq P A P ISTQGI QP A P IGTSGI QP A P ig T P GI H SAA P INTQG LQ PAAMAN Q Q P Q P E gktsavvladg ATIVAN P I S N 610
Cdd:pfam03154 245 ------ P H P PLQPMT QP P P PSQVSP QP L P -- Q P SL H GQM P PMPHS LQ TGPSHM Q H P V P P ----------- QPFPLT P Q S S 305
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 611 PFSAA P AATTVVQTH SQ SASTNT P A Q GSSPRPSIL R KK P ATDG - MAVRKTLL PP QP P DVAT P RVE S SMRSASG S ------ 683
Cdd:pfam03154 306 QSQVP P GPSPAAPGQ SQ QRIHTP P S Q SQLQSQQPP R EQ P LPPA p LSMPHIKP PP TT P IPQL P NPQ S HKHPPHL S gpspfq 385
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 684 ----- P R P AGA KP K S EV --- H VSI A T P VTVS L ETI S N Q ---- N A EQ P TVAVPPTAQQ P PPTI P SMIAAASP PSQ PAIAL - 750
Cdd:pfam03154 386 mnsnl P P P PAL KP L S SL sth H PPS A H P PPLQ L MPQ S Q Q lppp P A QP P VLTQSQSLPP P AASH P PTSGLHQV PSQ SPFPQ h 465
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 751 STI PG AV P V ----- T PP IT T IA A T P TLSA P VGGTP S T ------ VLGP P V P EIKV KEEA e PVDITR P V S TV PP LATNTVS P 819
Cdd:pfam03154 466 PFV PG GP P P itpps G PP TS T SS A M P GIQP P SSASV S S sgpvpa AVSC P L P PVQI KEEA - LDEAEE P E S PP PP PRSPSPE P 544
410
....*....|
gi 1274095713 820 SLALLA S NL S 829
Cdd:pfam03154 545 TVVNTP S HA S 554
PRK14950
PRK14950
DNA polymerase III subunits gamma and tau; Provisional
741-861
4.32e-03
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain]
Cd Length: 585
Bit Score: 40.95
E-value: 4.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 741 SPPS Q PAIA L ST I PGAVPVT P PITTIAA T PTLSA PV GG TP STVLG P PVPEIKVKEEA EPV -- DI T R P VSTVP P L A TNTVS 818
Cdd:PRK14950 344 TSYG Q LPLE L AV I EALLVPV P APQPAKP T AAAPS PV RP TP APSTR P KAAAAANIPPK EPV re TA T P P PVPPR P V A PPVPH 423
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 1274095713 819 PSLALLASNLSMP P S D LP P GAS P r KK P R K QQHVISTEE GD MM E 861
Cdd:PRK14950 424 TPESAPKLTRAAI P V D EK P KYT P - PA P P K EEEKALIAD GD VL E 465
PHA03307
PHA03307
transcriptional regulator ICP4; Provisional
531-846
4.96e-03
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain]
Cd Length: 1352
Bit Score: 40.92
E-value: 4.96e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 531 HIQGIQ PA PISTQ G IQPA P IGT S GIQ P A P IGT P G ih S AA P INTQG L QPAAMANQQ P Q P EGKT S AVVLADGATI VA NPISN 610
Cdd:PHA03307 91 SLSTLA PA SPARE G SPTP P GPS S PDP P P P TPP P A -- S PP P SPAPD L SEMLRPVGS P G P PPAA S PPAAGASPAA VA SDAAS 168
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 611 PFS AA PAATTVVQ T HSQSA S TNTPAQG S S P RPS ilrkkpatdgmavrktl LP P Q PP DVAT P RVE S SMRS A SGSP R P A GAK 690
Cdd:PHA03307 169 SRQ AA LPLSSPEE T ARAPS S PPAEPPP S T P PAA ----------------- AS P R PP RRSS P ISA S ASSP A PAPG R S A ADD 231
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 691 PKSEVHV S IATPVTVSLETIS N QNAEQP tvavpptaqqpppti P SM I AAASPPSQPAIALSTIPGAV P VTPPITTIAAT P 770
Cdd:PHA03307 232 AGASSSD S SSSESSGCGWGPE N ECPLPR --------------- P AP I TLPTRIWEASGWNGPSSRPG P ASSSSSPRERS P 296
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1274095713 771 TL S APVG G TPSTVLG P PVPEIKVKEEAEPVDI T RPV S TVPPL A TNTVS PS LALLA S nl SMP P SDLPPGA SPRK K PR 846
Cdd:PHA03307 297 SP S PSSP G SGPAPSS P RASSSSSSSRESSSSS T SSS S ESSRG A AVSPG PS PSRSP S -- PSR P PPPADPS SPRK R PR 370
PHA02732
PHA02732
hypothetical protein; Provisional
237-466
7.04e-03
hypothetical protein; Provisional
Pssm-ID: 165099 [Multi-domain]
Cd Length: 1467
Bit Score: 40.51
E-value: 7.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 237 PA V Q H L IHQPIQSRPPVTTSST -- IPP AVVA ---- TVSATR A QSPVITTTAAHA A DS T LSR P TL S IQHPPSAA IS IQ r P A 310
Cdd:PHA02732 1182 PA P Q L L SSYIPTGSVLYQDPIF ty IPP GIIG msgt NTFTFK A AQLQLSAASSPP A AT T PTP P PS S SSSSSAQS IS TS - P G 1260
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 311 Q SR ----- DV T TR I TLPSH PAL G TPK qqlhtmaqktifs T G TPV A AAT V apilatntlp STTT A GSVSHTQAPT S TIVTM 385
Cdd:PHA02732 1261 Q IQ ivlng ST T IH I NFLFF PAL S TPK ------------- I G QIL A MPI V ---------- NSSG A FISLYVNSAI S ANFNV 1317
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1274095713 386 T MPSHS S HA T AVTTSNIPVAKVV P QQITHTSPRIQPDYPP E r S SLIP IS GHRASPNPV A MET RN DNRP S V P VQ F QY F L P T 465
Cdd:PHA02732 1318 T IEYVF S NG T VIKRFTDEPGQIF P LPLINGDEEVIISVEN E - S TTFN IS ANNLGSAQL A LQL RN AISA S L P GP F AF F G P I 1396
.
gi 1274095713 466 Y 466
Cdd:PHA02732 1397 L 1397
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01