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Conserved domains on  [gi|1254046835|ref|NP_001343845|]
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G-protein coupled receptors family 1 profile domain-containing protein [Caenorhabditis elegans]

Protein Classification

G-protein coupled receptor( domain architecture ID 11535993)

G-protein coupled receptor transmits physiological signals from the outside of the cell to the inside via G proteins by binding to an extracellular agonist, which induces conformational changes that lead to the activation of heterotrimeric G proteins, which then bind to and activate numerous downstream effector proteins

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
7tm_classA_rhodopsin-like cd00637
rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor ...
14-320 1.56e-18

rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor superfamily; Class A rhodopsin-like receptors constitute about 90% of all GPCRs. The class A GPCRs include the light-sensitive rhodopsin as well as receptors for biogenic amines, lipids, nucleotides, odorants, peptide hormones, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes. Based on sequence similarity, GPCRs can be divided into six major classes: class A (rhodopsin-like family), class B (Methuselah-like, adhesion and secretin-like receptor family), class C (metabotropic glutamate receptor family), class D (fungal mating pheromone receptors), class E (cAMP receptor family), and class F (frizzled/smoothened receptor family). Nearly 800 human GPCR genes have been identified and are involved essentially in all major physiological processes. Approximately 40% of clinically marketed drugs mediate their effects through modulation of GPCR function for the treatment of a variety of human diseases including bacterial infections.


:

Pssm-ID: 410626 [Multi-domain]  Cd Length: 275  Bit Score: 85.42  E-value: 1.56e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835  14 LGALSVILNLFVIIALLRHRRrvLSNVFYVIVLHCAVLDVARGVCLILYGLPYFANSFYNINLDihtrihlfqLSRFALV 93
Cdd:cd00637     8 IFVVGLVGNLLVILVILRNRR--LRTVTNYFILNLAVADLLVGLLVIPFSLVSLLLGRWWFGDA---------LCKLLGF 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835  94 ILRVCNLLTIFNLLVFTTNEYIVIRYPLHYRRYFRRKFVLIILAICWTMSIMMAL----GILYSSSKSQTEWLPPEERGI 169
Cdd:cd00637    77 LQSVSLLASILTLTAISVDRYLAIVHPLRYRRRFTRRRAKLLIALIWLLSLLLALppllGWGVYDYGGYCCCCLCWPDLT 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835 170 DFATITMVLISSLCFVTLGTVVICYISILRTIRKfkdegclnndeshrihnrsLHRPINGQGSNCSNGSSLRgskwrsvq 249
Cdd:cd00637   157 LSKAYTIFLFVLLFLLPLLVIIVCYVRIFRKLRR-------------------HRRRIRSSSSNSSRRRRRR-------- 209
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1254046835 250 amSRHKYIYVIGSVLIVDLLFLCPYSGIQMVSFLHINNFLQITHgstlIRWWLQVLIGVHSVCQPLCYFRM 320
Cdd:cd00637   210 --RERKVTKTLLIVVVVFLLCWLPYFILLLLDVFGPDPSPLPRI----LYFLALLLAYLNSAINPIIYAFF 274
 
Name Accession Description Interval E-value
7tm_classA_rhodopsin-like cd00637
rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor ...
14-320 1.56e-18

rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor superfamily; Class A rhodopsin-like receptors constitute about 90% of all GPCRs. The class A GPCRs include the light-sensitive rhodopsin as well as receptors for biogenic amines, lipids, nucleotides, odorants, peptide hormones, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes. Based on sequence similarity, GPCRs can be divided into six major classes: class A (rhodopsin-like family), class B (Methuselah-like, adhesion and secretin-like receptor family), class C (metabotropic glutamate receptor family), class D (fungal mating pheromone receptors), class E (cAMP receptor family), and class F (frizzled/smoothened receptor family). Nearly 800 human GPCR genes have been identified and are involved essentially in all major physiological processes. Approximately 40% of clinically marketed drugs mediate their effects through modulation of GPCR function for the treatment of a variety of human diseases including bacterial infections.


Pssm-ID: 410626 [Multi-domain]  Cd Length: 275  Bit Score: 85.42  E-value: 1.56e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835  14 LGALSVILNLFVIIALLRHRRrvLSNVFYVIVLHCAVLDVARGVCLILYGLPYFANSFYNINLDihtrihlfqLSRFALV 93
Cdd:cd00637     8 IFVVGLVGNLLVILVILRNRR--LRTVTNYFILNLAVADLLVGLLVIPFSLVSLLLGRWWFGDA---------LCKLLGF 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835  94 ILRVCNLLTIFNLLVFTTNEYIVIRYPLHYRRYFRRKFVLIILAICWTMSIMMAL----GILYSSSKSQTEWLPPEERGI 169
Cdd:cd00637    77 LQSVSLLASILTLTAISVDRYLAIVHPLRYRRRFTRRRAKLLIALIWLLSLLLALppllGWGVYDYGGYCCCCLCWPDLT 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835 170 DFATITMVLISSLCFVTLGTVVICYISILRTIRKfkdegclnndeshrihnrsLHRPINGQGSNCSNGSSLRgskwrsvq 249
Cdd:cd00637   157 LSKAYTIFLFVLLFLLPLLVIIVCYVRIFRKLRR-------------------HRRRIRSSSSNSSRRRRRR-------- 209
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1254046835 250 amSRHKYIYVIGSVLIVDLLFLCPYSGIQMVSFLHINNFLQITHgstlIRWWLQVLIGVHSVCQPLCYFRM 320
Cdd:cd00637   210 --RERKVTKTLLIVVVVFLLCWLPYFILLLLDVFGPDPSPLPRI----LYFLALLLAYLNSAINPIIYAFF 274
7tm_1 pfam00001
7 transmembrane receptor (rhodopsin family); This family contains, amongst other ...
22-203 8.10e-13

7 transmembrane receptor (rhodopsin family); This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GCPRs of the rhodopsin superfamily. All opsins bind a chromophore, such as 11-cis-retinal. The function of most opsins other than the photoisomerases is split into two steps: light absorption and G-protein activation. Photoisomerases, on the other hand, are not coupled to G-proteins - they are thought to generate and supply the chromophore that is used by visual opsins.


Pssm-ID: 459624 [Multi-domain]  Cd Length: 256  Bit Score: 68.09  E-value: 8.10e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835  22 NLFVIIALLRHRRrvLSNVFYVIVLHCAVLDVargvCLILYGLPyFANSFYNINLDIHTRIHLFQLSRFALVilrVCNLL 101
Cdd:pfam00001   2 NLLVILVILRNKK--LRTPTNIFLLNLAVADL----LFSLLTLP-FWLVYYLNHGDWPFGSALCKIVGALFV---VNGYA 71
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835 102 TIFNLLVFTTNEYIVIRYPLHYRRYFRRKFVLIILAICWTMSIMMALGILYSSSKSQTEWLPPEERGIDFATIT-----M 176
Cdd:pfam00001  72 SILLLTAISIDRYLAIVHPLRYKRRRTPRRAKVLILVIWVLALLLSLPPLLFGWTLTVPEGNVTVCFIDFPEDLskpvsY 151
                         170       180
                  ....*....|....*....|....*....
gi 1254046835 177 VLISSLC--FVTLGTVVICYISILRTIRK 203
Cdd:pfam00001 152 TLLISVLgfLLPLLVILVCYTLIIRTLRK 180
 
Name Accession Description Interval E-value
7tm_classA_rhodopsin-like cd00637
rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor ...
14-320 1.56e-18

rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor superfamily; Class A rhodopsin-like receptors constitute about 90% of all GPCRs. The class A GPCRs include the light-sensitive rhodopsin as well as receptors for biogenic amines, lipids, nucleotides, odorants, peptide hormones, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes. Based on sequence similarity, GPCRs can be divided into six major classes: class A (rhodopsin-like family), class B (Methuselah-like, adhesion and secretin-like receptor family), class C (metabotropic glutamate receptor family), class D (fungal mating pheromone receptors), class E (cAMP receptor family), and class F (frizzled/smoothened receptor family). Nearly 800 human GPCR genes have been identified and are involved essentially in all major physiological processes. Approximately 40% of clinically marketed drugs mediate their effects through modulation of GPCR function for the treatment of a variety of human diseases including bacterial infections.


Pssm-ID: 410626 [Multi-domain]  Cd Length: 275  Bit Score: 85.42  E-value: 1.56e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835  14 LGALSVILNLFVIIALLRHRRrvLSNVFYVIVLHCAVLDVARGVCLILYGLPYFANSFYNINLDihtrihlfqLSRFALV 93
Cdd:cd00637     8 IFVVGLVGNLLVILVILRNRR--LRTVTNYFILNLAVADLLVGLLVIPFSLVSLLLGRWWFGDA---------LCKLLGF 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835  94 ILRVCNLLTIFNLLVFTTNEYIVIRYPLHYRRYFRRKFVLIILAICWTMSIMMAL----GILYSSSKSQTEWLPPEERGI 169
Cdd:cd00637    77 LQSVSLLASILTLTAISVDRYLAIVHPLRYRRRFTRRRAKLLIALIWLLSLLLALppllGWGVYDYGGYCCCCLCWPDLT 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835 170 DFATITMVLISSLCFVTLGTVVICYISILRTIRKfkdegclnndeshrihnrsLHRPINGQGSNCSNGSSLRgskwrsvq 249
Cdd:cd00637   157 LSKAYTIFLFVLLFLLPLLVIIVCYVRIFRKLRR-------------------HRRRIRSSSSNSSRRRRRR-------- 209
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1254046835 250 amSRHKYIYVIGSVLIVDLLFLCPYSGIQMVSFLHINNFLQITHgstlIRWWLQVLIGVHSVCQPLCYFRM 320
Cdd:cd00637   210 --RERKVTKTLLIVVVVFLLCWLPYFILLLLDVFGPDPSPLPRI----LYFLALLLAYLNSAINPIIYAFF 274
7tm_1 pfam00001
7 transmembrane receptor (rhodopsin family); This family contains, amongst other ...
22-203 8.10e-13

7 transmembrane receptor (rhodopsin family); This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GCPRs of the rhodopsin superfamily. All opsins bind a chromophore, such as 11-cis-retinal. The function of most opsins other than the photoisomerases is split into two steps: light absorption and G-protein activation. Photoisomerases, on the other hand, are not coupled to G-proteins - they are thought to generate and supply the chromophore that is used by visual opsins.


Pssm-ID: 459624 [Multi-domain]  Cd Length: 256  Bit Score: 68.09  E-value: 8.10e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835  22 NLFVIIALLRHRRrvLSNVFYVIVLHCAVLDVargvCLILYGLPyFANSFYNINLDIHTRIHLFQLSRFALVilrVCNLL 101
Cdd:pfam00001   2 NLLVILVILRNKK--LRTPTNIFLLNLAVADL----LFSLLTLP-FWLVYYLNHGDWPFGSALCKIVGALFV---VNGYA 71
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835 102 TIFNLLVFTTNEYIVIRYPLHYRRYFRRKFVLIILAICWTMSIMMALGILYSSSKSQTEWLPPEERGIDFATIT-----M 176
Cdd:pfam00001  72 SILLLTAISIDRYLAIVHPLRYKRRRTPRRAKVLILVIWVLALLLSLPPLLFGWTLTVPEGNVTVCFIDFPEDLskpvsY 151
                         170       180
                  ....*....|....*....|....*....
gi 1254046835 177 VLISSLC--FVTLGTVVICYISILRTIRK 203
Cdd:pfam00001 152 TLLISVLgfLLPLLVILVCYTLIIRTLRK 180
7tmA_amine_R-like cd14967
amine receptors and similar proteins, member of the class A family of seven-transmembrane G ...
17-203 3.58e-12

amine receptors and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; Amine receptors of the class A family of GPCRs include adrenoceptors, 5-HT (serotonin) receptors, muscarinic cholinergic receptors, dopamine receptors, histamine receptors, and trace amine receptors. The receptors of amine subfamily are major therapeutic targets for the treatment of neurological disorders and psychiatric diseases. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320098 [Multi-domain]  Cd Length: 259  Bit Score: 66.43  E-value: 3.58e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835  17 LSVILNLFVIIALLRHRRrvLSNVFYVIVLHCAVLDVARGVClilyGLPYFAnsfyninLDIHTRIHLFQLS--RFALVI 94
Cdd:cd14967    12 VTVFGNLLVILAVYRNRR--LRTVTNYFIVSLAVADLLVALL----VMPFSA-------VYTLLGYWPFGPVlcRFWIAL 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835  95 LRVCNLLTIFNLLVFTTNEYIVIRYPLHYRRYFRRKFVLIILAICWTMSIMMA-LGILYSSSKSQTEWLPPEERGIDFAT 173
Cdd:cd14967    79 DVLCCTASILNLCAISLDRYLAITRPLRYRQLMTKKRALIMIAAVWVYSLLISlPPLVGWRDETQPSVVDCECEFTPNKI 158
                         170       180       190
                  ....*....|....*....|....*....|
gi 1254046835 174 ITMVLISSLCFVTLGTVVICYISILRTIRK 203
Cdd:cd14967   159 YVLVSSVISFFIPLLIMIVLYARIFRVARR 188
7tmA_Glyco_hormone_R cd15136
glycoprotein hormone receptors, member of the class A family of seven-transmembrane G ...
15-202 4.95e-10

glycoprotein hormone receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The glycoprotein hormone receptors (GPHRs) are seven transmembrane domain receptors with a very large extracellular N-terminal domain containing many leucine-rich repeats responsible for hormone recognition and binding. The glycoprotein hormone family includes three gonadotropins: luteinizing hormone (LH), follicle-stimulating hormone (FSH), chorionic gonadotropin (CG) and a pituitary thyroid-stimulating hormone (TSH). The glycoprotein hormones exert their biological functions by interacting with their cognate GPCRs. Both LH and CG bind to the same receptor, the luteinizing hormone-choriogonadotropin receptor (LHCGR); FSH binds to FSH-R and TSH to TSH-R. GPHRs couple primarily to the G(s)-protein and promotes cAMP production, but also to the G(i)- or G(q)-protein.


Pssm-ID: 320264 [Multi-domain]  Cd Length: 275  Bit Score: 60.31  E-value: 4.95e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835  15 GALSVILNLFVIIALLRHRRRvlSNVFYVIVLHCAVLDVARGVCLILYGL--PYFANSFYNINLDIHT----RIHLFqLS 88
Cdd:cd15136    11 FLLALVGNIIVLLVLLTSRTK--LTVPRFLMCNLAFADFCMGIYLGLLAIvdAKTLGEYYNYAIDWQTgagcKTAGF-LA 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835  89 RFAlvilrvcNLLTIFNLLVFTTNEYIVIRYPLHYRRYFRRKFVLIILAICWTMSIMMA-LGILYSSSKSQTEWLPPEER 167
Cdd:cd15136    88 VFS-------SELSVFTLTVITLERWYAITHAMHLNKRLSLRQAAIIMLGGWIFALIMAlLPLVGVSSYSKTSICLPFET 160
                         170       180       190
                  ....*....|....*....|....*....|....*
gi 1254046835 168 GIDFATITMVLISSLCFVTLGTVVICYISILRTIR 202
Cdd:cd15136   161 ETPVSKAYVIFLLLFNGLAFLIICGCYIKIYLSVR 195
7tmA_Glycoprotein_LRR_R-like cd14980
glycoprotein hormone receptors and leucine-rich repeats containing G protein-coupled receptors, ...
15-203 1.29e-09

glycoprotein hormone receptors and leucine-rich repeats containing G protein-coupled receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes the glycoprotein hormone receptors (GPHRs), vertebrate receptors containing 17 leucine-rich repeats (LGR4-6), and the relaxin family peptide receptors (also known as LGR7 and LGR8). They are seven transmembrane domain receptors with a very large extracellular N-terminal domain containing many leucine-rich repeats responsible for hormone recognition and binding. The glycoprotein hormone receptor family contains receptors for the pituitary hormones, thyrotropin (thyroid-stimulating hormone receptor), follitropin (follicle-stimulating hormone receptor), and lutropin (luteinizing hormone receptor). Glycoprotein hormone receptors couple primarily to the G(s)-protein and promotes cAMP production, but also to the G(i)- or G(q)-protein. Two orphan GPCRs, LGR7 and LGR8, have been recently identified as receptors for the relaxin peptide hormones.


Pssm-ID: 320111 [Multi-domain]  Cd Length: 286  Bit Score: 59.18  E-value: 1.29e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835  15 GALSVILNLFVIIaLLRHRRRVLSNVFYVIVLHCAVLDVARGVCLILYGlpyFANSFYNINLDIHTRI---HLFQLSRFA 91
Cdd:cd14980    11 GILALIGNILVII-WHISSKKKKKKVPKLLIINLAIADFLMGIYLLIIA---IADQYYRGRYAQYSEEwlrSPPCLLACF 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835  92 LVILrvCNLLTIFNLLVFTTNEYIVIRYPLHYRRYfRRKFVLIILAICWTMSIMMALG-ILYSSSKSQTEWL-------- 162
Cdd:cd14980    87 LVSL--SSLMSVLMMLLITLDRYICIVYPFSNKRL-SYKSAKIILILGWLFSIIFAAIpILYSINQPGDNRLygyssicm 163
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|...
gi 1254046835 163 PPEERGIDFAT--ITMVLISSLCFVtlgTVVICYISILRTIRK 203
Cdd:cd14980   164 PSNVSNPYYRGwlIAYLLLTFIAWI---IICILYILIFISVRK 203
7tmA_Opsins_type2_animals cd14969
type 2 opsins in animals, member of the class A family of seven-transmembrane G ...
14-225 7.33e-08

type 2 opsins in animals, member of the class A family of seven-transmembrane G protein-coupled receptors; This rhodopsin family represents the type 2 opsins found in vertebrates and invertebrates except sponge. Type 2 opsins primarily function as G protein coupled receptors and are responsible for vision as well as for circadian rhythm and pigment regulation. On the contrary, type 1 opsins such as bacteriorhodopsin and proteorhodopsin are found in both prokaryotic and eukaryotic microbes, functioning as light-gated ion channels, proton pumps, sensory receptors and in other unknown functions. Although these two opsin types share seven-transmembrane domain topology and a conserved lysine reside in the seventh helix, type 1 opsins do not activate G-proteins and are not evolutionarily related to type 2. Type 2 opsins can be classified into six distinct subfamilies including the vertebrate opsins/encephalopsins, the G(o) opsins, the G(s) opsins, the invertebrate G(q) opsins, the photoisomerases, and the neuropsins.


Pssm-ID: 381741 [Multi-domain]  Cd Length: 284  Bit Score: 53.75  E-value: 7.33e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835  14 LGALSVILNLFVIIALLRHRRrvLSNVFYVIVLHCAVLDvargVCLILYGLPYFANSFYNINLDIHTR---IHLFQLSRF 90
Cdd:cd14969    10 IGVLGVVLNGLVIIVFLKKKK--LRTPLNLFLLNLALAD----LLMSVVGYPLSFYSNLSGRWSFGDPgcvIYGFAVTFL 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835  91 ALVilrvcnllTIFNLLVFTTNEYIVIRYPLHYRRyFRRKFVLIILAICWTMSIMMALGILYSSSKSQTE---------W 161
Cdd:cd14969    84 GLV--------SISTLAALAFERYLVIVRPLKAFR-LSKRRALILIAFIWLYGLFWALPPLFGWSSYVPEgggtscsvdW 154
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1254046835 162 lppEERGIDFATITMVLISSLCFVTLGTVVICYISILRTIRKFKDEGCLNNDESHRIHNRSLHR 225
Cdd:cd14969   155 ---YSKDPNSLSYIVSLFVFCFFLPLAIIIFCYYKIYRTLRKMSKRAARRKNSAITKRTKKAEK 215
7tmA_FMRFamide_R-like cd14978
FMRFamide (Phe-Met-Arg-Phe) receptors and related proteins, member of the class A family of ...
14-222 7.21e-07

FMRFamide (Phe-Met-Arg-Phe) receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes Drosophila melanogaster G-protein coupled FMRFamide (Phe-Met-Arg-Phe-NH2) receptor DrmFMRFa-R and related invertebrate receptors, as well as the vertebrate proteins GPR139 and GPR142. DrmFMRFa-R binds with high affinity to FMRFamide and intrinsic FMRFamide-related peptides. FMRFamide is a neuropeptide from the family of FMRFamide-related peptides (FaRPs), which all containing a C-terminal RFamide (Arg-Phe-NH2) motif and have diverse functions in the central and peripheral nervous systems. FMRFamide is an important neuropeptide in many types of invertebrates such as insects, nematodes, molluscs, and worms. In invertebrates, the FMRFamide-related peptides are involved in the regulation of heart rate, blood pressure, gut motility, feeding behavior, and reproduction. On the other hand, in vertebrates such as mice, they play a role in the modulation of morphine-induced antinociception. Orphan receptors GPR139 and GPR142 are very closely related G protein-coupled receptors, but they have different expression patterns in the brain and in other tissues. These receptors couple to inhibitory G proteins and activate phospholipase C. Studies suggested that dimer formation may be required for their proper function. GPR142 is predominantly expressed in pancreatic beta-cells and mediates enhancement of glucose-stimulated insulin secretion, whereas GPR139 is mostly expressed in the brain and is suggested to play a role in the control of locomotor activity. Tryptophan and phenylalanine have been identified as putative endogenous ligands of GPR139.


Pssm-ID: 410630 [Multi-domain]  Cd Length: 299  Bit Score: 50.71  E-value: 7.21e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835  14 LGALSVILNLFVIIALLRHRRRVLSNVfYVIVLhcAVLDVARGVCLILYGLPYFanSFYNINLDIHTRIHLFQLSRFALV 93
Cdd:cd14978    10 ICIFGIIGNILNLVVLTRKSMRSSTNV-YLAAL--AVSDILVLLSALPLFLLPY--IADYSSSFLSYFYAYFLPYIYPLA 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835  94 IlrVCNLLTIFNLLVFTTNEYIVIRYPLHYRRYFRRKFVLIILAICWTMSIMMAL----------GILYSSSKSQTEWLP 163
Cdd:cd14978    85 N--TFQTASVWLTVALTVERYIAVCHPLKARTWCTPRRARRVILIIIIFSLLLNLprffeyevveCENCNNNSYYYVIPT 162
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1254046835 164 PEERGIDFATITMVLISSLCFVTL--GTVVICYISILRTIRKFKDEGCLNNDESHRIHNRS 222
Cdd:cd14978   163 LLRQNETYLLKYYFWLYAIFVVLLpfILLLILNILLIRALRKSKKRRRLLRRRRRLLSRSQ 223
7tm_GPCRs cd14964
seven-transmembrane G protein-coupled receptor superfamily; This hierarchical evolutionary ...
6-203 2.94e-06

seven-transmembrane G protein-coupled receptor superfamily; This hierarchical evolutionary model represents the seven-transmembrane (7TM) receptors, often referred to as G protein-coupled receptors (GPCRs), which transmit physiological signals from the outside of the cell to the inside via G proteins. GPCRs constitute the largest known superfamily of transmembrane receptors across the three kingdoms of life that respond to a wide variety of extracellular stimuli including peptides, lipids, neurotransmitters, amino acids, hormones, and sensory stimuli such as light, smell and taste. All GPCRs share a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes. However, some 7TM receptors, such as the type 1 microbial rhodopsins, do not activate G proteins. Based on sequence similarity, GPCRs can be divided into six major classes: class A (the rhodopsin-like family), class B (the Methuselah-like, adhesion and secretin-like receptor family), class C (the metabotropic glutamate receptor family), class D (the fungal mating pheromone receptors), class E (the cAMP receptor family), and class F (the frizzled/smoothened receptor family). Nearly 800 human GPCR genes have been identified and are involved essentially in all major physiological processes. Approximately 40% of clinically marketed drugs mediate their effects through modulation of GPCR function for the treatment of a variety of human diseases including bacterial infections.


Pssm-ID: 410628 [Multi-domain]  Cd Length: 267  Bit Score: 48.58  E-value: 2.94e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835   6 TAVFLCGhLGALSVILNLFVIIALLRHRRRvlSNVFYVIVLHCAVLDVARGVC-LILYGLPYFANSFYNINLdihtrihl 84
Cdd:cd14964     1 TTIILSL-LTCLGLLGNLLVLLSLVRLRKR--PRSTRLLLASLAACDLLASLVvLVLFFLLGLTEASSRPQA-------- 69
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835  85 fqLSRFALVILRVCNLLTIFNLLVFTTNEYIVIRYPLHYRRYFRRKFVLIILAICWTMS-IMMALGILYSSSKSQTEWLP 163
Cdd:cd14964    70 --LCYLIYLLWYGANLASIWTTLVLTYHRYFALCGPLKYTRLSSPGKTRVIILGCWGVSlLLSIPPLVGKGAIPRYNTLT 147
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 1254046835 164 PEERgiDFATITMVLISSLCFVTLGTVVICYISILRTIRK 203
Cdd:cd14964   148 GSCY--LICTTIYLTWGFLLVSFLLPLVAFLVIFSRIVLR 185
7tmA_Melanopsin cd15336
vertebrate melanopsins (Opsin-4), member of the class A family of seven-transmembrane G ...
6-221 5.28e-06

vertebrate melanopsins (Opsin-4), member of the class A family of seven-transmembrane G protein-coupled receptors; Melanopsin (also called Opsin-4) is the G protein-coupled photopigment that mediates non-visual responses to light. In mammals, these photoresponses include the photo-entrainment of circadian rhythm, pupillary constriction, and acute nocturnal melatonin suppression. Mammalian melanopsins are expressed only in the inner retina, whereas non-mammalian vertebrate melanopsins are localized in various extra-retinal tissues such as iris, brain, pineal gland, and skin. Melanopsins belong the class A of the G protein-coupled receptors and possess seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320458 [Multi-domain]  Cd Length: 290  Bit Score: 48.18  E-value: 5.28e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835   6 TAVFLCGHLGalsVILNLFVIIALLRHRR-RVLSNVFyviVLHCAVLDVargvCLILYGLP-YFANSFYN--INLDIHTR 81
Cdd:cd15336     5 SVILIIGITG---MLGNALVIYAFCRSKKlRTPANYF---IINLAVSDF----LMSLTQSPiFFVNSLHKrwIFGEKGCE 74
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835  82 IHLFQLSRFALvilrvcnlLTIFNLLVFTTNEYIVIRYPLHYRRYFRRKFVLIILAICWTMSIMMALGILYSSSKSQTEW 161
Cdd:cd15336    75 LYAFCGALFGI--------TSMITLLAISLDRYLVITKPLASIRWVSKKRAMIIILLVWLYSLAWSLPPLFGWSAYVPEG 146
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1254046835 162 L-----------PPEERgidfaTITMVLISSLCFVTLGTVVICYISILRTIRK----FKDEGCLNNDESHRIHNR 221
Cdd:cd15336   147 LltsctwdymtfTPSVR-----AYTMLLFCFVFFIPLGIIIYCYLFIFLAIRStgreVQKLGSQDRKEKAKQYQR 216
7tmA_GPBAR1 cd15905
G protein-coupled bile acid receptor 1, member of the class A family of seven-transmembrane G ...
7-147 7.15e-06

G protein-coupled bile acid receptor 1, member of the class A family of seven-transmembrane G protein-coupled receptors; The G-protein coupled bile acid receptor GPBAR1 is also known as BG37, TGR5 (Takeda G-protein-coupled receptor 5), M-BAR (membrane-type receptor for bile acids), and GPR131. GPBAR1 is highly expressed in the gastrointestinal tract, but also found at many other tissues including liver, colon, heart, skeletal muscle, and brown adipose tissue. GPBAR1 functions as a membrane-bound receptor specific for bile acids, which are the end products of cholesterol metabolism that facilitate digestion and absorption of lipids or fat-soluble vitamins. Bile acids act as liver-specific metabolic signaling molecules and stimulate liver regeneration by activating GPBAR1 and nuclear receptors such as the farnesoid X receptor (FXR). Upon bile acids binding, GPBAR1 activation causes release of the G-alpha(s) subunit and activation of adenylate cyclase. The increase in intracellular cAMP level then stimulates the expression of many genes via the PKA-mediated phosphorylation of cAMP-response element binding protein (CREB). Thus, GPAR1-signalling exerts various biological effects in immune cells, liver, and metabolic tissues. For example, GPBAR1 activation leads to enhanced energy expenditure in brown adipose tissue and skeletal muscle; stimulation of glucagon-like peptide-1 (GLP-1) production in enteroendocrine L-cells; and inhibition of pro-inflammatory cytokine production in macrophages and attenuation of atherosclerosis development. GPBAR1 is a member of the class A rhodopsin-like family of GPCRs, which comprises receptors for hormones, neurotransmitters, sensory stimuli, and a variety of other ligands.


Pssm-ID: 320571 [Multi-domain]  Cd Length: 272  Bit Score: 47.44  E-value: 7.15e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835   7 AVFLCGHLGALSVILNLFVIIALLRHRR-RVLSNVFYVIVLhcaVLDVARGVCLilyglPYFANSFYNINLDIHTRIHLF 85
Cdd:cd15905     1 IFWLSVPLSSLIIFANLFIILGIACNRKlHNTANYFFLSLL---LADLLTGVAL-----PFIPGMSNESRRGYHSCLFVY 72
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1254046835  86 QLSRFALVILrvcnlltIFNLLVFTTNEYIVIRYPLHYRRYFRRKFVLIILAICWTMSIMMA 147
Cdd:cd15905    73 VAPNFLFLSF-------LANLLMVHYERYLCIVYPLQYHNFWVHRWVPLALLLTWALPLLFA 127
7tmA_Adenosine_R cd14968
adenosine receptor subfamily, member of the class A family of seven-transmembrane G ...
14-148 1.64e-05

adenosine receptor subfamily, member of the class A family of seven-transmembrane G protein-coupled receptors; The adenosine receptors (or P1 receptors), a family of G protein-coupled purinergic receptors, bind adenosine as their endogenous ligand. There are four types of adenosine receptors in human, designated as A1, A2A, A2B, and A3. Each type is encoded by a different gene and has distinct functions with some overlap. For example, both A1 and A2A receptors are involved in regulating myocardial oxygen consumption and coronary blood flow in the heart, while the A2A receptor also has a broad spectrum of anti-inflammatory effects in the body. These two receptors also expressed in the brain, where they have important roles in the release of other neurotransmitters such as dopamine and glutamate, while the A2B and A3 receptors found primarily in the periphery and play important roles in inflammation and immune responses. The A1 and A3 receptors preferentially interact with G proteins of the G(i/o) family, thereby lowering the intracellular cAMP levels, whereas the A2A and A2B receptors interact with G proteins of the G(s) family, activating adenylate cyclase to elevate cAMP levels.


Pssm-ID: 341316 [Multi-domain]  Cd Length: 285  Bit Score: 46.48  E-value: 1.64e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835  14 LGALSVILNLFVIIALLRHRRrvLSNV-FYVIVlHCAVLDVARGVclilYGLPyFAnsfynINLDIHTRIHlFQLSRFAL 92
Cdd:cd14968    10 IAVLSVLGNVLVIWAVKLNRA--LRTVtNYFIV-SLAVADILVGA----LAIP-LA-----ILISLGLPTN-FHGCLFMA 75
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1254046835  93 VILRVCNLLTIFNLLVFTTNEYIVIRYPLHYRRYFRRKFVLIILAICWTMSIMMAL 148
Cdd:cd14968    76 CLVLVLTQSSIFSLLAIAIDRYLAIKIPLRYKSLVTGRRAWGAIAVCWVLSFLVGL 131
7tmA_TAAR2_3_4 cd15312
trace amine-associated receptors 2, 3, 4, and similar receptors, member of the class A family ...
102-203 3.38e-05

trace amine-associated receptors 2, 3, 4, and similar receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; TAAR2, TAAR3, and TAAR4 are among the 15 identified trace amine-associated receptor subtypes, which form a distinct subfamily within the class A G protein-coupled receptor family. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320437 [Multi-domain]  Cd Length: 289  Bit Score: 45.42  E-value: 3.38e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835 102 TIFNLLVFTTNEYIVIRYPLHYRRYFRRKFVLIILAICWTMSIMMALGILYssSKSQTEWLPPEERGID--------FAT 173
Cdd:cd15312    87 SIFHLCFIAVDRYYAVCDPLHYRTKITTPVIKVFLVISWSVPCLFAFGVVF--SEVNLEGIEDYVALVSctgscvliFNK 164
                          90       100       110
                  ....*....|....*....|....*....|.
gi 1254046835 174 ITMVLISSLCFVTLGTVVIC-YISILRTIRK 203
Cdd:cd15312   165 LWGVIASLIAFFIPGTVMIGiYIKIFFVARK 195
7tmA_KiSS1R cd15095
KiSS1-derived peptide (kisspeptin) receptor, member of the class A family of ...
19-217 3.70e-05

KiSS1-derived peptide (kisspeptin) receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The G protein-coupled KiSS1-derived peptide receptor (GPR54 or kisspeptin receptor) binds the peptide hormone kisspeptin (previously known as metastin), which encoded by the metastasis suppressor gene (KISS1) expressed in various endocrine and reproductive tissues. The KiSS1 receptor is coupled to G proteins of the G(q/11) family, which lead to activation of phospholipase C and increase of intracellular calcium. This signaling cascade plays an important role in reproduction by regulating the secretion of gonadotropin-releasing hormone.


Pssm-ID: 320223 [Multi-domain]  Cd Length: 288  Bit Score: 45.35  E-value: 3.70e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835  19 VILNLFVIIALLRHRR-RVLSNvFYVIVLhcAVLDVARGVCL-----ILYGLP--YFANSfyninldihtrihlfqLSRF 90
Cdd:cd15095    15 LAGNSLVIYVVSRHREmRTVTN-YYIVNL--AVTDLAFLVCCvpftaALYATPswVFGDF----------------MCKF 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835  91 ALVILRVCNLLTIFNLLVFTTNEYIVIRYPLHYRRYFRRKFVLIILAICWTMSIMMALGILYSSSKSQTEWLP------- 163
Cdd:cd15095    76 VNYMMQVTVQATCLTLTALSVDRYYAIVHPIRSLRFRTPRVAVVVSACIWIVSFLLSIPVAIYYRLEEGYWYGpqtycre 155
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1254046835 164 --PEERGIDFATITMVLISSlcFVTLGTVVICYISILRTIRKFKDEGCLNNDESHR 217
Cdd:cd15095   156 vwPSKAFQKAYMIYTVLLTY--VIPLAIIAVCYGLILRRLWRRSVDGNNQSEQLSE 209
7tmA_Angiotensin_R-like cd14985
angiotesin receptor family and its related G protein-coupled receptors, member of the class A ...
6-203 4.29e-05

angiotesin receptor family and its related G protein-coupled receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes the angiotensin receptors, the bradykinin receptors, apelin receptor as well as putative G-protein coupled receptors (GPR15 and GPR25). Angiotensin II (Ang II), the main effector in the renin-angiotensin system, plays a crucial role in the regulation of cardiovascular homeostasis through its type 1 (AT1) and type 2 (AT2) receptors. Ang II contributes to cardiovascular diseases such as hypertension and atherosclerosis via AT1R activation. Ang II increases blood pressure through Gq-mediated activation of phospholipase C, resulting in phosphoinositide (PI) hydrolysis and increased intracellular calcium levels. Through the AT2 receptor, Ang II counteracts the vasoconstrictor action of AT1R and thereby induces vasodilation, sodium excretion, and reduction of blood pressure. Bradykinins (BK) are pro-inflammatory peptides that mediate various vascular and pain responses to tissue injury through its B1 and B2 receptors. Apelin (APJ) receptor binds the endogenous peptide ligands, apelin and Toddler/Elabela. APJ is an adipocyte-derived hormone that is ubiquitously expressed throughout the human body, and Toddler/Elabela is a short secretory peptide that is required for normal cardiac development in zebrafish. Activation of APJ receptor plays key roles in diverse physiological processes including vasoconstriction and vasodilation, cardiac muscle contractility, angiogenesis, and regulation of water balance and food intake. Orphan receptors, GPR15 and GPR25, share strong sequence homology to the angiotensin II type AT1 and AT2 receptors.


Pssm-ID: 341320 [Multi-domain]  Cd Length: 284  Bit Score: 45.06  E-value: 4.29e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835   6 TAVFLCGHLGalsvilNLFVIIALLRHRR-RVLSNVFyviVLHCAVLDVargvcLILYGLPYFANSFYNiNLDIHTRIHL 84
Cdd:cd14985     8 IAIFLVGLLG------NLFVVWVFLFPRGpKRVADIF---IANLAAADL-----VFVLTLPLWATYTAN-QYDWPFGAFL 72
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835  85 FQLSRFALVILRVCnllTIFNLLVFTTNEYIVIRYPLHYRRYFRRKFVLIILAICWTMSIMMALGILYSSSKSQTEWLPP 164
Cdd:cd14985    73 CKVSSYVISVNMFA---SIFLLTCMSVDRYLAIVHPVASRRLRRRRQARVTCALIWVVACLLSLPTFLLRSLQAIENLNK 149
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*
gi 1254046835 165 EERGIDFATITMVLISSLCFVTLGTVV------ICYISILRTIRK 203
Cdd:cd14985   150 TACIMLYPHEAWHFGLSLELNILGFVLplliilTCYFHIARSLRK 194
7tmA_D2-like_dopamine_R cd15053
D2-like dopamine receptors, member of the class A family of seven-transmembrane G ...
97-205 4.90e-05

D2-like dopamine receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Dopamine receptors are members of the class A G protein-coupled receptors that are involved in many neurological processes in the central nervous system (CNS). The neurotransmitter dopamine is the primary endogenous agonist for dopamine receptors. Dopamine receptors consist of at least five subtypes: D1, D2, D3, D4, and D5. The D1 and D5 subtypes are members of the D1-like family of dopamine receptors, whereas the D2, D3 and D4 subtypes are members of the D2-like family. The D1-like family receptors are coupled to G proteins of the G(s) family, which activate adenylate cyclase, causing cAMP formation and activation of protein kinase A. In contrast, activation of D2-like family receptors is linked to G proteins of the G(i) family, which inhibit adenylate cyclase. Dopamine receptors are major therapeutic targets for neurological and psychiatric disorders such as drug abuse, depression, schizophrenia, or Parkinson's disease.


Pssm-ID: 320181 [Multi-domain]  Cd Length: 263  Bit Score: 44.64  E-value: 4.90e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835  97 VCNLLTIFNLLVFTTNEYIVIRYPLHYRRYFRRKFVLIILAICWTMSIMMALGILYSSskSQTEWLPPEErgIDFATITM 176
Cdd:cd15053    83 MCSTASIFNLCAISIDRYIAVTQPIKYARQKNSKRVLLTIAIVWVVSAAIACPLLFGL--NNVPYRDPEE--CRFYNPDF 158
                          90       100       110
                  ....*....|....*....|....*....|.
gi 1254046835 177 VLISSLC--FVTLGTVVICYISILRTIRKFK 205
Cdd:cd15053   159 IIYSSISsfYIPCIVMLLLYYRIFRALRREK 189
7TM_GPCR_Srx pfam10328
Serpentine type 7TM GPCR chemoreceptor Srx; Chemoreception is mediated in Caenorhabditis ...
19-146 6.94e-05

Serpentine type 7TM GPCR chemoreceptor Srx; Chemoreception is mediated in Caenorhabditis elegans by members of the seven-transmembrane G-protein-coupled receptor class (7TM GPCRs) of proteins which are of the serpentine type. Srx is part of the Srg superfamily of chemoreceptors. Chemoperception is one of the central senses of soil nematodes like C. elegans which are otherwise 'blind' and 'deaf'.


Pssm-ID: 431215  Cd Length: 262  Bit Score: 44.51  E-value: 6.94e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835  19 VILNLFVIIALlrHRRRVLSNVFYVIVLHCAVLDVarGVCLI--LYGLP--YFANSFYNINLDIHtrihLFQLsrFALVI 94
Cdd:pfam10328   8 LVANLLVFIAF--LKLPSLKNSFGILCLSQAIGNA--IICLIflFYVVPmtLFQNSFLPEWLNSH----IIGL--IAMGL 77
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1254046835  95 LRVCNLLTIFNllvfTTNEYIVIRYPLHYRRYFRRKFVLIILAICWTMSIMM 146
Cdd:pfam10328  78 YEISPLSHLLI----ALNRFCAVFFPLKYEKIFSIKNTKIIIIFIWIVSIIF 125
7tmA_Opsin5_neuropsin cd15074
neuropsin (Opsin-5), member of the class A family of seven-transmembrane G protein-coupled ...
14-227 7.49e-05

neuropsin (Opsin-5), member of the class A family of seven-transmembrane G protein-coupled receptors; Neuropsin, also known as Opsin-5, is a photoreceptor protein expressed in the retina, brain, testes, and spinal cord. Neuropsin belongs to the type 2 opsin family of the class A G-protein coupled receptors. Mammalian neuropsin activates Gi protein-mediated photo-transduction pathway in a UV-dependent manner, whereas, in non-mammalian vertebrates, neuropsin is involved in regulating the photoperiodic control of seasonal reproduction in birds such as quail. As with other opsins, it may also act as a retinal photoisomerase.


Pssm-ID: 320202 [Multi-domain]  Cd Length: 284  Bit Score: 44.57  E-value: 7.49e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835  14 LGALSVILNLFVIIALLRHRRRVLSNVFYVIVLhcAVLDVarGVCLILYglPYFANSFYN--INLDIHTrihlFQLSRFA 91
Cdd:cd15074    10 IGILSTLGNGTVLFVLYRRRSKLKPAELLTVNL--AVSDL--GISVFGY--PLAIISAFAhrWLFGDIG----CVFYGFC 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835  92 LVILRVCnllTIFNLLVFTTNEYIVIRYPlHYRRYFRRKFVLIILAICWTMSIMMALGILYSSSKSQTE---------WL 162
Cdd:cd15074    80 GFLFGCC---SINTLTAISIYRYLKICHP-PYGPKLSRRHVCIVIVAIWLYALFWAVAPLVGWGSYGPEpfgtscsidWT 155
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1254046835 163 PPEERGIDFATITMVLIssLCFVT-LGTVVICYISILRTIRKFKDEgcLNNDESHRIHNRSLHRPI 227
Cdd:cd15074   156 GASASVGGMSYIISIFI--FCYLLpVLIIVFSYVKIIRKVKSSRKR--VAGFDSRSKRQHKIERKV 217
7tmA_D1-like_dopamine_R cd15057
D1-like family of dopamine receptors, member of the class A family of seven-transmembrane G ...
17-148 8.79e-05

D1-like family of dopamine receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Dopamine receptors are members of the class A G protein-coupled receptors that are involved in many neurological processes in the central nervous system (CNS). The neurotransmitter dopamine is the primary endogenous agonist for dopamine receptors. Dopamine receptors consist of at least five subtypes: D1, D2, D3, D4, and D5. The D1 and D5 subtypes are members of the D1-like family of dopamine receptors, whereas the D2, D3 and D4 subtypes are members of the D2-like family. The D1-like family receptors are coupled to G proteins of the G(s) family, which activate adenylate cyclase, causing cAMP formation and activation of protein kinase A. In contrast, activation of D2-like family receptors is linked to G proteins of the G(i) family, which inhibit adenylate cyclase. Dopamine receptors are major therapeutic targets for neurological and psychiatric disorders such as drug abuse, depression, schizophrenia, or Parkinson's disease. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320185 [Multi-domain]  Cd Length: 299  Bit Score: 44.34  E-value: 8.79e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835  17 LSVILNLFVIIALLRHR--RRVLSNVFyVIVLHCAVLDVA------RGVCLILYGLPY--FANSFynINLDIhtrihlfq 86
Cdd:cd15057    13 LTLLGNALVIAAVLRFRhlRSKVTNYF-IVSLAVSDLLVAilvmpwAAVNEVAGYWPFgsFCDVW--VSFDI-------- 81
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1254046835  87 lsrfalvilrVCNLLTIFNLLVFTTNEYIVIRYPLHYRRYFRRKFVLIILAICWTMSIMMAL 148
Cdd:cd15057    82 ----------MCSTASILNLCVISVDRYWAISSPFRYERRMTRRRAFIMIAVAWTLSALISF 133
7tmA_5-HT2 cd15052
serotonin receptor subtype 2, member of the class A family of seven-transmembrane G ...
102-203 1.11e-04

serotonin receptor subtype 2, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT2 receptors are a subfamily of serotonin receptors that bind the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the central nervous system (CNS). The 5-HT2 subfamily is composed of three subtypes that mediate excitatory neurotransmission: 5-HT2A, 5-HT2B, and 5-HT2C. They are selectively linked to G proteins of the G(q/11) family and activate phospholipase C, which leads to activation of protein kinase C and calcium release. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in diseases such as migraine, schizophrenia, and depression. Indeed, 5-HT2 receptors are attractive targets for a variety of psychoactive drugs, ranging from atypical antipsychotic drugs, antidepressants, and anxiolytics, which have an antagonistic action on 5-HT2 receptors, to hallucinogens, which act as agonists at postsynaptic 5-HT2 receptors. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320180 [Multi-domain]  Cd Length: 262  Bit Score: 43.84  E-value: 1.11e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835 102 TIFNLLVFTTNEYIVIRYPLHYRRYFRRKFVLIILAICWTMSIMMALGILYSSSKSQTEWLppEERGIDFATITMVLISS 181
Cdd:cd15052    88 SIMHLCTISLDRYMAIRYPLRTRRNKSRTTVFLKIAIVWLISIGISSPIPVLGIIDTTNVL--NNGTCVLFNPNFVIYGS 165
                          90       100
                  ....*....|....*....|....*..
gi 1254046835 182 LC--FVTLGTVVICY---ISILRTIRK 203
Cdd:cd15052   166 IVafFIPLLIMVVTYaltIRLLSNEQK 192
7tmA_Chemokine_R cd14984
classical and atypical chemokine receptors, member of the class A family of ...
8-203 1.19e-04

classical and atypical chemokine receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Chemokines are principal regulators for leukocyte trafficking, recruitment, and activation. Chemokine family membership is defined on the basis of sequence homology and on the presence of variations on a conserved cysteine motif, which allows the family to further divide into four subfamilies (CC, CXC, XC, and CX3C). Chemokines interact with seven-transmembrane receptors which are typically coupled to G protein for signaling. Currently, there are ten known receptors for CC chemokines, seven for CXC chemokines, and single receptors for the XC and CX3C chemokines. In addition to these classical chemokine receptors, there exists a subfamily of atypical chemokine receptors (ACKRs) that are unable to couple to G-proteins and, instead, they preferentially mediate beta-arrestin dependent processes, such as receptor internalization, after ligand binding. The classical chemokine receptors contain a conserved DRYLAIV motif in the second intracellular loop, which is required for G-protein coupling. However, the ACKRs lack this conserved motif and fail to couple to G-proteins and induce classical GPCR signaling. Five receptors have been identified for the ACKR family, including CC-chemokine receptors like 1 and 2 (CCRL1 and CCRL2), CXCR7, Duffy antigen receptor for chemokine (DARC), and D6. Both ACKR1 (DARC) and ACKR3 (CXCR7) show low sequence homology to the classic chemokine receptors.


Pssm-ID: 341319 [Multi-domain]  Cd Length: 278  Bit Score: 43.74  E-value: 1.19e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835   8 VFLCGHLGalsvilNLFVIIALLRHRR-RVLSNVFyviVLHCAVLDVargvcLILYGLPYFANSFyninldihtrIHLFQ 86
Cdd:cd14984    10 VFLLGLVG------NSLVLLVLLYYRKlRSMTDVY---LLNLALADL-----LFVLTLPFWAVYA----------ADGWV 65
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835  87 LSRFalvilrVCNLLT----------IFNLLVFTTNEYIVIRYPLHYRRYFRRKFVLIILAICWTMSIMMALGILYSSSK 156
Cdd:cd14984    66 FGSF------LCKLVSalytinfysgILFLACISIDRYLAIVHAVSALRARTLLHGKLTCLGVWALALLLSLPEFIFSQV 139
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1254046835 157 SQTEWLP------PEERGIDFATITMVLISSLCFVT-LGTVVICYISILRTIRK 203
Cdd:cd14984   140 SEENGSSicsydyPEDTATTWKTLLRLLQNILGFLLpLLVMLFCYSRIIRTLLR 193
7tmA_NPYR-like cd15203
neuropeptide Y receptors and related proteins, member of the class A family of ...
8-203 2.58e-04

neuropeptide Y receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; NPY is a 36-amino acid peptide neurotransmitter with a C-terminal tyrosine amide residue that is widely distributed in the brain and the autonomic nervous system of many mammalian species. NPY exerts its functions through five, G-protein coupled receptor subtypes including NPY1R, NPY2R, NPY4R, NPY5R, and NPY6R; however, NPY6R is not functional in humans. NYP receptors are also activated by its two other family members, peptide YY (PYY) and pancreatic polypeptide (PP). They typically couple to Gi or Go proteins, which leads to a decrease in adenylate cyclase activity, thereby decreasing intracellular cAMP levels, and are involved in diverse physiological roles including appetite regulation, circadian rhythm, and anxiety. Also included in this subgroup is prolactin-releasing peptide (PrRP) receptor (previously known as GPR10), which is activated by its endogenous ligand PrRP, a neuropeptide possessing C-terminal Arg-Phe-amide motif. There are two active isoforms of PrRP in mammals: one consists of 20 amino acid residues (PrRP-20) and the other consists of 31 amino acid residues (PrRP-31). PrRP receptor shows significant sequence homology to the NPY receptors, and a micromolar level of NPY can bind and completely inhibit the PrRP-evoked intracellular calcium response in PrRP receptor-expressing cells, suggesting that the PrRP receptor shares a common ancestor with the NPY receptors.


Pssm-ID: 320331 [Multi-domain]  Cd Length: 293  Bit Score: 42.59  E-value: 2.58e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835   8 VFLCGHLGALSVILNLFVIIALLRHRR-RVLSNVFyviVLHCAVLDVArgVCLIlyGLPYFANSFYninldihTRIHLFQ 86
Cdd:cd15203     4 ILLYGLIIVLGVVGNLLVIYVVLRNKSmQTVTNIF---ILNLAVSDLL--LCLV--SLPFTLIYTL-------TKNWPFG 69
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835  87 --LSRFALVILRVCNLLTIFNLLVFTTNEYIVIRYPLhyRRYFRRKFVLIILAICWTMSIMMALGILYSSSKSQT----- 159
Cdd:cd15203    70 siLCKLVPSLQGVSIFVSTLTLTAIAIDRYQLIVYPT--RPRMSKRHALLIIALIWILSLLLSLPLAIFQELSDVpieil 147
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1254046835 160 ---------EWLPPEERGIdFATITMVLissLCFVTLGTVVICYISILRTIRK 203
Cdd:cd15203   148 pycgyfcteSWPSSSSRLI-YTISVLVL---QFVIPLLIISFCYFRISLKLRK 196
7tmA_Adenosine_R_A2A cd15068
adenosine receptor subtype A2A, member of the class A family of seven-transmembrane G ...
14-148 2.61e-04

adenosine receptor subtype A2A, member of the class A family of seven-transmembrane G protein-coupled receptors; The A2A receptor, a member of the adenosine receptor family of G protein-coupled receptors, binds adenosine as its endogenous ligand and is involved in regulating myocardial oxygen consumption and coronary blood flow. High-affinity A2A and low-affinity A2B receptors are preferentially coupled to G proteins of the stimulatory (Gs) family, which lead to activation of adenylate cyclase and thereby increasing the intracellular cAMP levels. The A2A receptor activation protects against tissue injury and acts as anti-inflammatory agent. In human skin endothelial cells, activation of A2B receptor, but not the A2A receptor, promotes angiogenesis. Alternatively, activated A2A receptor, but not the A2B receptor, promotes angiogenesis in human umbilical vein and lung microvascular endothelial cells. The A2A receptor alters cardiac contractility indirectly by modulating the anti-adrenergic effect of A1 receptor, while the A2B receptor exerts direct effects on cardiac contractile function, but does not modulate beta-adrenergic or A1 anti-adrenergic effects.


Pssm-ID: 320196 [Multi-domain]  Cd Length: 293  Bit Score: 42.62  E-value: 2.61e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835  14 LGALSVILNLFVIIALLRHRRrvLSNVFYVIVLHCAVLDVARGVCLILYGLPY---FANSFYNInldihtrihLFqLSRF 90
Cdd:cd15068    10 IAVLAILGNVLVCWAVWLNSN--LQNVTNYFVVSLAAADIAVGVLAIPFAITIstgFCAACHGC---------LF-IACF 77
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1254046835  91 ALVILRVcnllTIFNLLVFTTNEYIVIRYPLHYRRYFRRKFVLIILAICWTMSIMMAL 148
Cdd:cd15068    78 VLVLTQS----SIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGL 131
7tmA_GPR25 cd15193
G protein-coupled receptor 25, member of the class A family of seven-transmembrane G ...
7-208 2.91e-04

G protein-coupled receptor 25, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR25 is an orphan G-protein coupled receptor that shares strong sequence homology to GPR15 and the angiotensin II receptors. These closely related receptors form a group within the class A G-protein coupled receptors (GPCRs). GPR15 controls homing of T cells, especially FOXP3(+) regulatory T cells, to the large intestine mucosa and thereby mediates local immune homeostasis. Moreover, GRP15-deficient mice were shown to be prone to develop more severe large intestine inflammation. Angiotensin II (Ang II), the main effector in the renin-angiotensin system, plays a crucial role in the regulation of cardiovascular homeostasis through its type 1 (AT1) and type 2 (AT2) receptors.


Pssm-ID: 320321 [Multi-domain]  Cd Length: 279  Bit Score: 42.43  E-value: 2.91e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835   7 AVFLCGHLGalsvilNLFVIIAL-LRHRRRVLSNVFyviVLHCAVLDVargvcLILYGLPYFANSFYNINlDIHTRIHLF 85
Cdd:cd15193     9 IIFFTGLLG------NLFVIALMsKRSTTKRLVDTF---VLNLAVADL-----VFVLTLPFWAASTALGG-QWLFGEGLC 73
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835  86 QLSRFALVILRVCNlltIFNLLVFTTNEYIVIRYPLHYRRYFRRKFVLIILAICWTMSIMMALGILYSSSKSQTEWLPPE 165
Cdd:cd15193    74 KLSSFIIAVNRCSS---ILFLTGMSVDRYLAVVKLLDSRPLRTRRCALITCCIIWAVSLVLGIPSLVYRNLINESVCVED 150
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|...
gi 1254046835 166 ERGIDFATITMVLISSLCFVTLGTVVICYISILRTIRKFKDEG 208
Cdd:cd15193   151 SSSRFFQGISLATLFLTFVLPLIVILFCYCSILVRLRRHFHGA 193
7tmA_Vasopressin-like cd14986
vasopressin receptors and its related G protein-coupled receptors, member of the class A ...
16-317 3.64e-04

vasopressin receptors and its related G protein-coupled receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Members of this group form a subfamily within the class A G-protein coupled receptors (GPCRs), which includes the vasopressin and oxytocin receptors, the gonadotropin-releasing hormone receptors (GnRHRs), the neuropeptide S receptor (NPSR), and orphan GPR150. These receptors share significant sequence homology with each other, suggesting that they have a common evolutionary origin. Vasopressin, also known as arginine vasopressin or anti-diuretic hormone, is a neuropeptide synthesized in the hypothalamus. The actions of vasopressin are mediated by the interaction of this hormone with three tissue-specific subtypes: V1AR, V1BR, and V2R. Although vasopressin differs from oxytocin by only two amino acids, they have divergent physiological functions. Vasopressin is involved in regulating osmotic and cardiovascular homeostasis, whereas oxytocin plays an important role in the uterus during childbirth and in lactation. GnRHR, also known as luteinizing hormone releasing hormone receptor (LHRHR), plays an central role in vertebrate reproductive function; its activation by binding to GnRH leads to the release of follicle stimulating hormone (FSH) and luteinizing hormone (LH) from the pituitary gland. Neuropeptide S (NPS) promotes arousal and anxiolytic-like effects by activating its cognate receptor NPSR. NPSR has also been associated with asthma and allergy. GPR150 is an orphan receptor closely related to the oxytocin and vasopressin receptors.


Pssm-ID: 320117 [Multi-domain]  Cd Length: 295  Bit Score: 42.36  E-value: 3.64e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835  16 ALSVILNLFVIIALLRHRRRvlSNVFYVIVLHCAVLDVARGVCLILYGLPYFA-NSFYNINLdihtrihlfqLSRFAlVI 94
Cdd:cd14986    12 VFTLVGNGLVILVLRRKRKK--RSRVNIFILNLAIADLVVAFFTVLTQIIWEAtGEWVAGDV----------LCRIV-KY 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835  95 LRVCNL-LTIFNLLVFTTNEYIVIRYPLhyRRYFRRKFVLIILAICWTMSIMMA---LGILYSSSKSQTE------WLPP 164
Cdd:cd14986    79 LQVVGLfASTYILVSMSLDRYQAIVKPM--SSLKPRKRARLMIVVAWVLSFLFSipqLVIFVERELGDGVhqcwssFYTP 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835 165 EERGIDFATITMVLIsslcFVTLGTVVICYISILRTIRKfkdegclnndeshrihNRSLHRPINGQGSNCSNGSSLRGSk 244
Cdd:cd14986   157 WQRKVYITWLATYVF----VIPLIILSYCYGRILRTIWI----------------RSRQKTDRPIAPTAMSCRSVSCVS- 215
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1254046835 245 wRSVQAMSRHKyIYVIGSVLIVDLLFLCPYSGIQMVSFLHINNFLQITHGSTLIrwWLQVLIGVHSVCQPLCY 317
Cdd:cd14986   216 -SRVSLISRAK-IKTIKMTLVIILAFILCWTPYFIVQLLDVYAGMQQLENDAYV--VSETLASLNSALNPLIY 284
7tmA_purinoceptor-like cd14982
purinoceptor and its related proteins, member of the class A family of seven-transmembrane G ...
17-325 5.10e-04

purinoceptor and its related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; Members of this subfamily include lysophosphatidic acid receptor, P2 purinoceptor, protease-activated receptor, platelet-activating factor receptor, Epstein-Barr virus induced gene 2, proton-sensing G protein-coupled receptors, GPR35, and GPR55, among others. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 341318 [Multi-domain]  Cd Length: 283  Bit Score: 41.87  E-value: 5.10e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835  17 LSVILNLFVIIALLRHRRrvLSNVFYVIVLHCAVLDVARGVCLILYgLPYFANSFYNINLDIHTRIH--LFQLSRFAlvi 94
Cdd:cd14982    13 LGLLGNILALWVFLRKMK--KRSPTTIYMINLALADLLFVLTLPFR-IYYYLNGGWWPFGDFLCRLTglLFYINMYG--- 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835  95 lrvcnllTIFNLLVFTTNEYIVIRYPLHYRRYFRRKFVLIILAICWTMSIMMALGILYSSSKSQTE---------WLPPE 165
Cdd:cd14982    87 -------SILFLTCISVDRYLAVVHPLKSRRLRRKRYAVGVCAGVWILVLVASVPLLLLRSTIAKEnnsttcfefLSEWL 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835 166 ERGIDFATITMVLIsslCFVTLGTVVICYISILRTIRkfkdegclnndeshRIHNRSLHRPingqgsncsngsslrgskw 245
Cdd:cd14982   160 ASAAPIVLIALVVG---FLIPLLIILVCYSLIIRALR--------------RRSKQSQKSV------------------- 203
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835 246 rsvqamSRHKYIYVIGSVLIVDLLFLCPYSGIQMVSFLHINNFLQITHGSTLIRWWLQVLIGVHSVC---QPLCYFRMTE 322
Cdd:cd14982   204 ------RKRKALRMILIVLAVFLVCFLPYHVTRILYLLVRLSFIADCSARNSLYKAYRITLCLASLNsclDPLIYYFLSK 277

                  ....
gi 1254046835 323 -FRR 325
Cdd:cd14982   278 tFRK 281
7tmA_Mel1 cd15209
melatonin receptor 1, member of the class A family of seven-transmembrane G protein-coupled ...
16-197 1.06e-03

melatonin receptor 1, member of the class A family of seven-transmembrane G protein-coupled receptors; Melatonin (N-acetyl-5-methoxytryptamine) is a naturally occurring sleep-promoting chemical found in vertebrates, invertebrates, bacteria, fungi, and plants. In mammals, melatonin is secreted by the pineal gland and is involved in regulation of circadian rhythms. Its production peaks during the nighttime, and is suppressed by light. Melatonin is shown to be synthesized in other organs and cells of many vertebrates, including the Harderian gland, leukocytes, skin, and the gastrointestinal (GI) tract, which contains several hundred times more melatonin than the pineal gland and is involved in the regulation of GI motility, inflammation, and sensation. Melatonin exerts its pleiotropic physiological effects through specific membrane receptors, named MT1A, MT1B, and MT1C, which belong to the class A rhodopsin-like G-protein coupled receptor family. MT1A and MT1B subtypes are present in mammals, whereas MT1C subtype has been found in amphibians and birds. The melatonin receptors couple to G proteins of the G(i/o) class, leading to the inhibition of adenylate cyclase.


Pssm-ID: 320337 [Multi-domain]  Cd Length: 279  Bit Score: 40.92  E-value: 1.06e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835  16 ALSVILNLFVIIALLRHRRRVLSNVFYVIVLHCAVLDVArgvcliLYGLPYFANSFYNINLDIhTRIHLfQLSRFalvIL 95
Cdd:cd15209    12 VVDVLGNLLVILSVLRNKKLRNAGNIFVVSLSVADLVVA------IYPYPLILHAIFHNGWTL-GQLHC-QASGF---IM 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835  96 RVCNLLTIFNLLVFTTNEYIVIRYPLHYRRYFRRKFVLIILAICWTMSIMMALGILYSSSKSQTewlpPEERGIDFA--- 172
Cdd:cd15209    81 GLSVIGSIFNITAIAINRYCYICHSLQYDRLYSLRNTCCYLCLTWLLTVLAVLPNFFIGSLQYD----PRIYSCTFAqtv 156
                         170       180
                  ....*....|....*....|....*....
gi 1254046835 173 ----TITMVLISSLcfVTLGTVVICYISI 197
Cdd:cd15209   157 stvyTITVVVIHFL--LPLLIVSFCYLRI 183
7tmA_Ap5-HTB1-like cd15065
serotonin receptor subtypes B1 and B2 from Aplysia californica and similar proteins; member of ...
16-147 1.12e-03

serotonin receptor subtypes B1 and B2 from Aplysia californica and similar proteins; member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes Aplysia californica serotonin receptors Ap5-HTB1 and Ap5-HTB2, and similar proteins from bilateria including insects, mollusks, annelids, and worms. Ap5-HTB1 is one of the several different receptors for 5-hydroxytryptamine (5HT, serotonin). In Aplysia, serotonin plays important roles in a variety of behavioral and physiological processes mediated by the central nervous system. These include circadian clock, feeding, locomotor movement, cognition and memory, synaptic growth and synaptic plasticity. Both Ap5-HTB1 and Ap5-HTB2 receptors are coupled to G-proteins that stimulate phospholipase C, leading to the activation of phosphoinositide metabolism. Ap5-HTB1 is expressed in the reproductive system, whereas Ap5-HTB2 is expressed in the central nervous system.


Pssm-ID: 320193 [Multi-domain]  Cd Length: 300  Bit Score: 40.80  E-value: 1.12e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835  16 ALSVILNLFVIIALLRHRR-RVLSNVFYViVLHCAVLDVARGVCLI-----LYGLPYFANSFYN--INLDIhtrihlfql 87
Cdd:cd15065    11 VLAIFGNVLVCLAIFTDRRlRKKSNLFIV-SLAVADLLVALLVMTFavvndLLGYWLFGETFCNiwISFDV--------- 80
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835  88 srfalvilrVCNLLTIFNLLVFTTNEYIVIRYPLHYRRYFRRKFVLIILAICWTMSIMMA 147
Cdd:cd15065    81 ---------MCSTASILNLCAISLDRYIHIKKPLKYERWMTTRRALVVIASVWILSALIS 131
7tmA_Relaxin_R cd15137
relaxin family peptide receptors, member of the class A family of seven-transmembrane G ...
14-203 1.68e-03

relaxin family peptide receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes relaxin/insulin-like family peptide receptor 1 (RXFP1 or LGR7) and 2 (RXFP2 or LGR8), which contain a very large extracellular N-terminal domain with numerous leucine-rich repeats responsible for hormone recognition and binding. Relaxin is a member of the insulin superfamily that has diverse actions in both reproductive and non-reproductive tissues. The relaxin-like peptide family includes relaxin-1, relaxin-2, and the insulin-like (INSL) peptides such as INSL3, INSL4, INSL5 and INSL6. The relaxin family peptides share high structural but low sequence similarity, and exert their physiological functions by activating a group of four GPCRs, RXFP1-4. Relaxin and INSL3 are the endogenous ligands for RXFP1 and RXFP2, respectively. Upon receptor binding, relaxin activates a variety of signaling pathways to produce second messengers such as cAMP.


Pssm-ID: 320265 [Multi-domain]  Cd Length: 284  Bit Score: 40.26  E-value: 1.68e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835  14 LGALSVILNLFVIIALLRHRRRVLSNVFYVIVLHCAvlDVARGVCLILYGlpyFANSFYNINLDIHTriHLFQLS---RF 90
Cdd:cd15137    10 VGIIALLGNLFVLIWRLKYKEENKVHSFLIKNLAIA--DFLMGVYLLIIA---SVDLYYRGVYIKHD--EEWRSSwlcTF 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835  91 ALVILRVCNLLTIFNLLVFTTNEYIVIRYPLHYRRyFRRKFVLIILAICWTMSIMMA----LGILYSSS--KSQTEWLP- 163
Cdd:cd15137    83 AGFLATLSSEVSVLILTLITLDRFICIVFPFSGRR-LGLRRAIIVLACIWLIGLLLAvlplLPWDYFGNfyGRSGVCLPl 161
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....
gi 1254046835 164 ----PEERGIDFATITMVLISSLCFVTlgtVVICYISILRTIRK 203
Cdd:cd15137   162 hitdERPAGWEYSVFVFLGLNFLAFVF---ILLSYIAMFISIRR 202
7tmA_tyramine_octopamine_R-like cd15060
tyramine/octopamine receptor-like, member of the class A family of seven-transmembrane G ...
16-203 1.70e-03

tyramine/octopamine receptor-like, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes tyramine/octopamine receptors and similar proteins found in insects and other invertebrates. Both octopamine and tyramine mediate their actions via G protein-coupled receptors (GPCRs) and are the invertebrate equivalent of vertebrate adrenergic neurotransmitters. In Drosophila, octopamine is involved in ovulation by mediating an egg release from the ovary, while a physiological role for tyramine in this process is not fully understood. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320188 [Multi-domain]  Cd Length: 260  Bit Score: 40.11  E-value: 1.70e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835  16 ALSVILNLFVIIALLRHRR-RVLSNVFYVIVlhcAVLDVARGVCLILYGLPYFANSfyNINLDIHtrihlfqLSRFALVI 94
Cdd:cd15060    12 AFTIVGNILVILSVFTYRPlRIVQNFFIVSL---AVADLAVAIFVLPLNVAYFLLG--KWLFGIH-------LCQMWLTC 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835  95 LRVCNLLTIFNLLVFTTNEYIVIRYPLHYRRYFRRKFVLIILAICWTMSIMMALGILY------SSSKSQTEWLPPEERG 168
Cdd:cd15060    80 DILCCTASILNLCAIALDRYWAIHDPINYAQKRTLKRVLLMIVVVWALSALISVPPLIgwndwpENFTETTPCTLTEEKG 159
                         170       180       190
                  ....*....|....*....|....*....|....*..
gi 1254046835 169 idfatitMVLISSL--CFVTLGTVVICYISILRTIRK 203
Cdd:cd15060   160 -------YVIYSSSgsFFIPLLIMTIVYVKIFIATSK 189
7tmA_5-HT1_5_7 cd15064
serotonin receptor subtypes 1, 5 and 7, member of the class A family of seven-transmembrane G ...
6-160 2.96e-03

serotonin receptor subtypes 1, 5 and 7, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes serotonin receptor subtypes 1, 5, and 7 that are activated by the neurotransmitter serotonin. The 5-HT1 and 5-HT5 receptors mediate inhibitory neurotransmission by coupling to G proteins of the G(i/o) family. The 5-HT1 receptor subfamily includes 5-HT1A, 5-HT1B, 5-HT1D, 5-HT1E, and 5-HT1F. There is no 5-HT1C receptor subtype, as it has been reclassified as 5-HT2C receptor. The 5-HT5A and 5-HT5B receptors have been cloned from rat and mouse, but only the 5-HT5A isoform has been identified in human because of the presence of premature stop codons in the human 5-HT5B gene, which prevents a functional receptor from being expressed. The 5-HT7 receptor is coupled to Gs, which positively stimulates adenylate cyclase activity, leading to increased intracellular cAMP formation and calcium influx. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in neurologic disorders such as migraine, schizophrenia, and depression.


Pssm-ID: 320192 [Multi-domain]  Cd Length: 258  Bit Score: 39.23  E-value: 2.96e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835   6 TAVFLcGHLGALSVILNLFVIIALLRHRRrvLSNVFYVIVLHCAVLDVARGVCLILYGLpyfansfyninldIHTRIHLF 85
Cdd:cd15064     3 ISVLL-SLIILATILGNALVIAAILLTRK--LHTPANYLIASLAVADLLVAVLVMPLSA-------------VYELTGRW 66
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1254046835  86 QLSRFALVILRVCNLL----TIFNLLVFTTNEYIVIRYPLHYRRYFRRKFVLIILAICWTMSIMMALGILYSSSKSQTE 160
Cdd:cd15064    67 ILGQVLCDIWISLDVTcctaSILHLCVIALDRYWAITDAVEYAHKRTPKRAAVMIALVWTLSICISLPPLFGWRTPDSE 145
7tmA_D1A_dopamine_R cd15320
D1A (or D1) subtype dopamine receptor, member of the class A family of seven-transmembrane G ...
6-148 3.14e-03

D1A (or D1) subtype dopamine receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Dopamine receptors are members of the class A G protein-coupled receptors that are involved in many neurological processes in the central nervous system (CNS). The neurotransmitter dopamine is the primary endogenous agonist for dopamine receptors. Dopamine receptors consist of at least five subtypes: D1, D2, D3, D4, and D5. The D1 and D5 subtypes are members of the D1-like family of dopamine receptors, whereas the D2, D3 and D4 subtypes are members of the D2-like family. The D1-like family receptors are coupled to G proteins of the G(s) family, which activate adenylate cyclase, causing cAMP formation and activation of protein kinase A. Dopamine receptors are major therapeutic targets for neurological and psychiatric disorders such as drug abuse, depression, schizophrenia, or Parkinson's disease.


Pssm-ID: 320443 [Multi-domain]  Cd Length: 319  Bit Score: 39.60  E-value: 3.14e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835   6 TAVFLCghLGALSVIL-NLFVIIALL--RHRRRVLSNvFYVIVLHCAVLDVA------RGVCLILYGLPYfaNSFYNI-- 74
Cdd:cd15320     4 TGCFLS--VLILSTLLgNTLVCAAVIrfRHLRSKVTN-FFVISLAVSDLLVAvlvmpwKAVAEIAGFWPF--GSFCNIwv 78
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1254046835  75 NLDIhtrihlfqlsrfalvilrVCNLLTIFNLLVFTTNEYIVIRYPLHYRRYFRRKFVLIILAICWTMSIMMAL 148
Cdd:cd15320    79 AFDI------------------MCSTASILNLCVISVDRYWAISSPFRYERKMTPKVAFIMISVAWTLSVLISF 134
7tmA_TAARs cd15055
trace amine-associated receptors, member of the class A family of seven-transmembrane G ...
17-274 3.70e-03

trace amine-associated receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The trace amine-associated receptors (TAARs) are a distinct subfamily within the class A G protein-coupled receptor family. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320183 [Multi-domain]  Cd Length: 285  Bit Score: 39.07  E-value: 3.70e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835  17 LSVILNLFVIIALLRHRRrvLSNVFYVIVLHCAVLDVARGVCLILYGLPYFANS--FYNinlDIHTRIHLFqlsrFALVI 94
Cdd:cd15055    13 LTVLGNLLVIISISHFKQ--LHTPTNLLLLSLAVADFLVGLLVMPFSMIRSIETcwYFG---DTFCKLHSS----LDYIL 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835  95 LRVcnllTIFNLLVFTTNEYIVIRYPLHYRRYFRRKFVLIILAICWTMSIMMALGILYSSSK---SQTEWLPPEERGIDF 171
Cdd:cd15055    84 TSA----SIFNLVLIAIDRYVAVCDPLLYPTKITIRRVKICICLCWFVSALYSSVLLYDNLNqpgLIRYNSCYGECVVVV 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835 172 ATITMVLISSLCFVTLGTVVIC-YISILRTIRKfkdegclnndeshriHNRSLHRPINGQGSNCSNGSSLRgskwrsvqa 250
Cdd:cd15055   160 NFIWGVVDLVLTFILPCTVMIVlYMRIFVVARS---------------QARAIRSHTAQVSLEGSSKKVSK--------- 215
                         250       260
                  ....*....|....*....|....
gi 1254046835 251 MSRHKYIYVIGSVLIVDLLFLCPY 274
Cdd:cd15055   216 KSERKAAKTLGIVVGVFLLCWLPY 239
7tmA_LTB4R cd14975
leukotriene B4 receptors, member of the class A family of seven-transmembrane G ...
22-203 5.51e-03

leukotriene B4 receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Leukotriene B4 (LTB4), a metabolite of arachidonic acid, is a powerful chemotactic activator for granulocytes and macrophages. Two receptors for LTB4 have been identified: a high-affinity receptor (LTB4R1 or BLT1) and a low-affinity receptor (TB4R2 or BLT2). Both BLT1 and BLT2 receptors belong to the rhodopsin-like G-protein coupled receptor superfamily and primarily couple to G(i) proteins, which lead to chemotaxis, calcium mobilization, and inhibition of adenylate cyclase. In some cells, they can also couple to the G(q)-like protein, G16, and activate phospholipase C. LTB4 is involved in mediating inflammatory processes, immune responses, and host defense against infection. Studies have shown that LTB4 stimulates leukocyte extravasation, neutrophil degranulation, lysozyme release, and reactive oxygen species generation.


Pssm-ID: 320106 [Multi-domain]  Cd Length: 278  Bit Score: 38.62  E-value: 5.51e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835  22 NLFVIIALLRHRRRvlSNVFYVIVLHCAVLDVArgvclILYGLPYFANSFYNINLDihtrihlfqlsrFALVILRVCNLL 101
Cdd:cd14975    18 NSFVIWSILIKVKQ--RSVTMLLVLNLALADLA-----VLLTLPVWIYFLATGTWD------------FGLAACKGCVYV 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835 102 -------TIFNLLVFTTNEYIVIRYPLHYRRYFRRKFVLIILAICWTMSIMMALGIL-YSSSKSQTEWLPPEER-GIDFA 172
Cdd:cd14975    79 cavsmyaSVFLITLMSLERFLAVSRPFVSQGWRAKALAHKVLAIIWLLAVLLATPVIaFRHVEETVENGMCKYRhYSDGQ 158
                         170       180       190
                  ....*....|....*....|....*....|...
gi 1254046835 173 TITMVLISSLC--FVTLGTVVICYISILRTIRK 203
Cdd:cd14975   159 LVFHLLLETVVgfAVPFTAVVLCYSCLLRRLRR 191
7tmA_mAChR_M3 cd15299
muscarinic acetylcholine receptor subtype M3, member of the class A family of ...
8-173 6.31e-03

muscarinic acetylcholine receptor subtype M3, member of the class A family of seven-transmembrane G protein-coupled receptors; Muscarinic acetylcholine receptors (mAChRs) regulate the activity of many fundamental central and peripheral functions. The mAChR family consists of 5 subtypes M1-M5, which can be further divided into two major groups according to their G-protein coupling preference. The M1, M3 and M5 receptors selectively interact with G proteins of the G(q/11) family, whereas the M2 and M4 receptors preferentially link to the G(i/o) types of G proteins. The M3 receptor is mainly located in smooth muscle, exocrine glands and vascular endothelium. It induces vomiting in the central nervous system and is a critical regulator of glucose homeostasis by modulating insulin secretion. Generally, M3 receptor causes contraction of smooth muscle resulting in vasoconstriction and increased glandular secretion. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320426 [Multi-domain]  Cd Length: 274  Bit Score: 38.39  E-value: 6.31e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835   8 VFLCGHLGALSVILNLFVIIALLRHRRRVLSNVFYVIVLHCAVLDVARgVCLILYGLPYFANSFYNINLdihtrihlfqL 87
Cdd:cd15299     7 AFLTGILALVTIIGNILVIVSFKVNKQLKTVNNYFLLSLACADLIIGV-ISMNLFTTYIIMNRWALGNL----------A 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835  88 SRFALVILRVCNLLTIFNLLVFTTNEYIVIRYPLHYRRYFRRKFVLIILAICWTMS-IMMALGILYSSSKSQTEWLPPEE 166
Cdd:cd15299    76 CDLWLSIDYVASNASVMNLLVISFDRYFSITRPLTYRAKRTTKRAGVMIGLAWVISfVLWAPAILFWQYFVGKRTVPPDE 155

                  ....*..
gi 1254046835 167 RGIDFAT 173
Cdd:cd15299   156 CFIQFLS 162
7tmA_P2Y1-like cd15168
P2Y purinoceptors 1, 2, 4, 6, 11 and similar proteins, member of the class A family of ...
16-201 6.53e-03

P2Y purinoceptors 1, 2, 4, 6, 11 and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; The P2Y receptor family is composed of eight subtypes, which are activated by naturally occurring extracellular nucleotides such as ATP, ADP, UTP, UDP, and UDP-glucose. These eight receptors are ubiquitous in human tissues and can be further classified into two subfamilies based on sequence homology and second messenger coupling: a subfamily of five P2Y1-like receptors (P2Y1, P2Y2, P2Y4, P2Y6, and P2Y11Rs) that are coupled to G(q) protein to activate phospholipase C (PLC) and a second subfamily of three P2Y12-like receptors (P2Y12, P2YR13, and P2Y14Rs) that are coupled to G(i) protein to inhibit adenylate cyclase. Several cloned subtypes, such as P2Y3, P2Y5, and P2Y7-10, are not functional mammalian nucleotide receptors. The native agonists for P2Y receptors are: ATP (P2Y2, P2Y12), ADP (P2Y1, P2Y12, and P2Y13), UTP (P2Y2, P2Y4), UDP (P2Y6, P2Y14), and UDP-glucose (P2Y14). This cluster only includes P2Y1-like receptors as well as other closely related orphan receptors, such as GPR91 (a succinate receptor) and GPR80/GPR99 (an alpha-ketoglutarate receptor).


Pssm-ID: 341329 [Multi-domain]  Cd Length: 284  Bit Score: 38.45  E-value: 6.53e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835  16 ALSVILNLFVIIALLRHRRRVLSNVFYVIVLHCAVLdvargvcLILYGLPYFANSFYNINLDIHTRIhLFQLSRFalviL 95
Cdd:cd15168    12 LVGLLLNSVVLYRFIFHLKPWNSSAIYMFNLAVSDL-------LYLLSLPFLIYYYANGDHWIFGDF-MCKLVRF----L 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835  96 RVCNLLT-IFNLLVFTTNEYIVIRYPLHYRRYFRRKFVLIILAICWTMSIMMALGIL-YSSSKSQTEW-----LPPEERG 168
Cdd:cd15168    80 FYFNLYGsILFLTCISVHRYLGICHPLRSLGKLKKRHAVAISVAVWILVLLQLLPILfFATTGRKNNRttcydTTSPEEL 159
                         170       180       190
                  ....*....|....*....|....*....|...
gi 1254046835 169 IDFATITMVLISSLCFVTLGTVVICYISILRTI 201
Cdd:cd15168   160 NDYVIYSMVLTGLGFLLPLLIILACYGLIVRAL 192
7tmA_Galanin_R-like cd14971
galanin receptor and related proteins, member of the class A family of seven-transmembrane G ...
12-152 8.11e-03

galanin receptor and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes G-protein coupled galanin receptors, kisspeptin receptor and allatostatin-A receptor (AstA-R) in insects. These receptors, which are members of the class A of seven transmembrane GPCRs, share a high degree of sequence homology among themselves. The galanin receptors bind galanin, a neuropeptide that is widely expressed in the brain, peripheral tissues, and endocrine glands. Galanin is implicated in numerous neurological and psychiatric diseases including Alzheimer's disease, eating disorders, and epilepsy, among many others. KiSS1-derived peptide receptor (also known as GPR54 or kisspeptin receptor) binds the peptide hormone kisspeptin (metastin), which encoded by the metastasis suppressor gene (KISS1) expressed in various endocrine and reproductive tissues. AstA-R is a G-protein coupled receptor that binds allatostatin A. Three distinct types of allatostatin have been identified in the insects and crustaceans: AstA, AstB, and AstC. They both inhibit the biosynthesis of juvenile hormone and exert an inhibitory influence on food intake. Therefore, allatostatins are considered as potential targets for insect control.


Pssm-ID: 320102 [Multi-domain]  Cd Length: 281  Bit Score: 38.22  E-value: 8.11e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254046835  12 GHLGALSVILNLFVIIALLRHRRRVLSNVFYVIVLhcAVLDVargvCLILYGLPYFAnsfyninLDIHTRIHLFQ--LSR 89
Cdd:cd14971     8 ALIFLLGLVGNSLVILVVARNKPMRSTTNLFILNL--AVADL----TFLLFCVPFTA-------TIYPLPGWVFGdfMCK 74
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1254046835  90 FALVILRVCNLLTIFNLLVFTTNEYIVIRYPLHYRRYFRRKFVLIILAICWTMSIMMALGILY 152
Cdd:cd14971    75 FVHYFQQVSMHASIFTLVAMSLDRFLAVVYPLRSLHIRTPRNALAASGCIWVVSLAVAAPVLA 137
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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