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Conserved domains on  [gi|1246417663|ref|NP_001342659|]
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uncharacterized protein LOC242747 isoform 2 [Mus musculus]

Protein Classification

C2H2-type zinc finger protein( domain architecture ID 11472214)

Cys2His2 (C2H2)-type zinc finger protein may be involved in transcriptional regulation

CATH:  3.30.160.60
Gene Ontology:  GO:0008270|GO:0003677
PubMed:  11361095|22803940
SCOP:  4003583

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
125-435 5.46e-12

FOG: Zn-finger [General function prediction only];


:

Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 67.41  E-value: 5.46e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417663 125 KPYKCNQCDKAFSQNGHLIIHKRTHTGEKPYECNQ--CGKAFTDQSQLRIHKRAHTGEKPYKCNQCDKAFLQNINLRIHK 202
Cdd:COG5048    32 RPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSYsgCDKSFSRPLELSRHLRTHHNNPSDLNSKSLPLSNSKASSSSLS 111

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417663 203 RAHTGE-KPYKCNQCDKAFAQNGHLIIHKRTHTGEKPYECNQCGKAFADQSQ----LRIHRRIHTGEKPYKcnqcdkafa 277
Cdd:COG5048   112 SSSSNSnDNNLLSSHSLPPSSRDPQLPDLLSISNLRNNPLPGNNSSSVNTPQsnslHPPLPANSLSKDPSS--------- 182

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417663 278 qHSNLRIHKRTHTGEKPYECNQCDKAFLQNINLKIHKRAHTGEKSYECSQCGKAF------ARYYHLQCHERIHTEEKPY 351
Cdd:COG5048   183 -NLSLLISSNVSTSIPSSSENSPLSSSYSIPSSSSDQNLENSSSSLPLTTNSQLSpksllsQSPSSLSSSDSSSSASESP 261

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417663 352 KCNQCDKVFSQSHSLQIHKRTHTG-EKPYVCNQCGKAFADNSHLRRHKRT--HTGE--KPYEC--NQCGSAFSQNSYLRI 424
Cdd:COG5048   262 RSSLPTASSQSSSPNESDSSSEKGfSLPIKSKQCNISFSRSSPLTRHLRSvnHSGEslKPFSCpySLCGKLFSRNDALKR 341

                         330
                  ....*....|.
gi 1246417663 425 HKRTHTGEKHF 435
Cdd:COG5048   342 HILLHTSISPA 352
 
Name Accession Description Interval E-value
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
125-435 5.46e-12

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 67.41  E-value: 5.46e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417663 125 KPYKCNQCDKAFSQNGHLIIHKRTHTGEKPYECNQ--CGKAFTDQSQLRIHKRAHTGEKPYKCNQCDKAFLQNINLRIHK 202
Cdd:COG5048    32 RPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSYsgCDKSFSRPLELSRHLRTHHNNPSDLNSKSLPLSNSKASSSSLS 111

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417663 203 RAHTGE-KPYKCNQCDKAFAQNGHLIIHKRTHTGEKPYECNQCGKAFADQSQ----LRIHRRIHTGEKPYKcnqcdkafa 277
Cdd:COG5048   112 SSSSNSnDNNLLSSHSLPPSSRDPQLPDLLSISNLRNNPLPGNNSSSVNTPQsnslHPPLPANSLSKDPSS--------- 182

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417663 278 qHSNLRIHKRTHTGEKPYECNQCDKAFLQNINLKIHKRAHTGEKSYECSQCGKAF------ARYYHLQCHERIHTEEKPY 351
Cdd:COG5048   183 -NLSLLISSNVSTSIPSSSENSPLSSSYSIPSSSSDQNLENSSSSLPLTTNSQLSpksllsQSPSSLSSSDSSSSASESP 261

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417663 352 KCNQCDKVFSQSHSLQIHKRTHTG-EKPYVCNQCGKAFADNSHLRRHKRT--HTGE--KPYEC--NQCGSAFSQNSYLRI 424
Cdd:COG5048   262 RSSLPTASSQSSSPNESDSSSEKGfSLPIKSKQCNISFSRSSPLTRHLRSvnHSGEslKPFSCpySLCGKLFSRNDALKR 341

                         330
                  ....*....|.
gi 1246417663 425 HKRTHTGEKHF 435
Cdd:COG5048   342 HILLHTSISPA 352
zf-H2C2_2 pfam13465
Zinc-finger double domain;
114-138 7.08e-05

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 39.66  E-value: 7.08e-05
                          10        20
                  ....*....|....*....|....*
gi 1246417663 114 LRRHKRTHTGEKPYKCNQCDKAFSQ 138
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFKS 26
 
Name Accession Description Interval E-value
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
125-435 5.46e-12

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 67.41  E-value: 5.46e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417663 125 KPYKCNQCDKAFSQNGHLIIHKRTHTGEKPYECNQ--CGKAFTDQSQLRIHKRAHTGEKPYKCNQCDKAFLQNINLRIHK 202
Cdd:COG5048    32 RPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSYsgCDKSFSRPLELSRHLRTHHNNPSDLNSKSLPLSNSKASSSSLS 111

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417663 203 RAHTGE-KPYKCNQCDKAFAQNGHLIIHKRTHTGEKPYECNQCGKAFADQSQ----LRIHRRIHTGEKPYKcnqcdkafa 277
Cdd:COG5048   112 SSSSNSnDNNLLSSHSLPPSSRDPQLPDLLSISNLRNNPLPGNNSSSVNTPQsnslHPPLPANSLSKDPSS--------- 182

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417663 278 qHSNLRIHKRTHTGEKPYECNQCDKAFLQNINLKIHKRAHTGEKSYECSQCGKAF------ARYYHLQCHERIHTEEKPY 351
Cdd:COG5048   183 -NLSLLISSNVSTSIPSSSENSPLSSSYSIPSSSSDQNLENSSSSLPLTTNSQLSpksllsQSPSSLSSSDSSSSASESP 261

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417663 352 KCNQCDKVFSQSHSLQIHKRTHTG-EKPYVCNQCGKAFADNSHLRRHKRT--HTGE--KPYEC--NQCGSAFSQNSYLRI 424
Cdd:COG5048   262 RSSLPTASSQSSSPNESDSSSEKGfSLPIKSKQCNISFSRSSPLTRHLRSvnHSGEslKPFSCpySLCGKLFSRNDALKR 341

                         330
                  ....*....|.
gi 1246417663 425 HKRTHTGEKHF 435
Cdd:COG5048   342 HILLHTSISPA 352
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
137-398 1.19e-10

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 63.18  E-value: 1.19e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417663 137 SQNGHLIIHKRTHTGEKPYECNQCGKAFTDQSQLRIHKRAHTGEKPYKCNQCDKAFLQNINLRIHKRAHTGEKPYKCNQC 216
Cdd:COG5048   181 SSNLSLLISSNVSTSIPSSSENSPLSSSYSIPSSSSDQNLENSSSSLPLTTNSQLSPKSLLSQSPSSLSSSDSSSSASES 260

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417663 217 DKAFAQNGHLIIHKRTHTGE-------KPYECNQCGKAFADQSQLRIHRR--IHTGE--KPYKC--NQCDKAFAQHSNLR 283
Cdd:COG5048   261 PRSSLPTASSQSSSPNESDSssekgfsLPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCpySLCGKLFSRNDALK 340

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417663 284 IHKRTHTGEKPYEC--NQCDKAFLQNINLKIHKRAH-----TGEKSYEC--SQCGKAFARYYHLQCHERIHTEEKP--YK 352
Cdd:COG5048   341 RHILLHTSISPAKEklLNSSSKFSPLLNNEPPQSLQqykdlKNDKKSETlsNSCIRNFKRDSNLSLHIITHLSFRPynCK 420

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 1246417663 353 CNQCDKVFSQSHSLQIHKRTHTGEKPYVCNQCGKAFADNSHLRRHK 398
Cdd:COG5048   421 NPPCSKSFNRHYNLIPHKKIHTNHAPLLCSILKSFRRDLDLSNHGK 466
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
97-429 2.50e-10

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 62.02  E-value: 2.50e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417663  97 KPYECNQCGKAFTYHSQLRRHKRTHTGEKPYKCNQ--CDKAFSQNGHLIIHKRTHTGEKPYECNQCGKafTDQSQLRIHK 174
Cdd:COG5048    32 RPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSYsgCDKSFSRPLELSRHLRTHHNNPSDLNSKSLP--LSNSKASSSS 109

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417663 175 RAHTGEKPYKCNQCDKaflQNINLRIHKRAHtgEKPYKCNQCDKAFAQNGHLIIHKRTHTGEKPYECNQ--CGKAFADQS 252
Cdd:COG5048   110 LSSSSSNSNDNNLLSS---HSLPPSSRDPQL--PDLLSISNLRNNPLPGNNSSSVNTPQSNSLHPPLPAnsLSKDPSSNL 184

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417663 253 QLRIHRRIHTGEKPYKCNQCDKAFAQHSNLRIHKRTHTGEKPYECNQCDKAFLQNINLKIHKRA------HTGEKSYECS 326
Cdd:COG5048   185 SLLISSNVSTSIPSSSENSPLSSSYSIPSSSSDQNLENSSSSLPLTTNSQLSPKSLLSQSPSSLsssdssSSASESPRSS 264

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417663 327 QCGKAFARYYHLQCHERIHT-EEKPYKCNQCDKVFSQSHSLQIHKRT--HTGE--KPYVC--NQCGKAFADNSHLRRHKR 399
Cdd:COG5048   265 LPTASSQSSSPNESDSSSEKgFSLPIKSKQCNISFSRSSPLTRHLRSvnHSGEslKPFSCpySLCGKLFSRNDALKRHIL 344

                         330       340       350
                  ....*....|....*....|....*....|..
gi 1246417663 400 THTGEKPYEC--NQCGSAFSQNSYLRIHKRTH 429
Cdd:COG5048   345 LHTSISPAKEklLNSSSKFSPLLNNEPPQSLQ 376
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
41-430 7.08e-08

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 54.32  E-value: 7.08e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417663  41 EPYECNKSGKAFAYHHYPQWHERIHTGEKPYEVIQYGEDFVYH--SSLQIYKRIAIGEKPYECNQCGKafTYHSQLRRHK 118
Cdd:COG5048    32 RPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSYSGCDKSFSrpLELSRHLRTHHNNPSDLNSKSLP--LSNSKASSSS 109

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417663 119 RTHTGEKPYKCNQCD-KAFSQNGHLIIHK----RTHTGEKPYECNQCGKAFTDQSQLRIHkrahtgEKPYKCNQCDKAFl 193
Cdd:COG5048   110 LSSSSSNSNDNNLLSsHSLPPSSRDPQLPdllsISNLRNNPLPGNNSSSVNTPQSNSLHP------PLPANSLSKDPSS- 182

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417663 194 qNINLRIHKRAHTGEKPYKCNQCDKAFAQNGHLIIHKRTHTGEKPYECNQCGKAFADQSQLRIHRRI------HTGEKPY 267
Cdd:COG5048   183 -NLSLLISSNVSTSIPSSSENSPLSSSYSIPSSSSDQNLENSSSSLPLTTNSQLSPKSLLSQSPSSLsssdssSSASESP 261

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417663 268 KCNQCDKAFAQHSNLRIHKRTHTG-EKPYECNQCDKAFLQNINLKIHKRA--HTGEKSYECSQ----CGKAFARYYHLQC 340
Cdd:COG5048   262 RSSLPTASSQSSSPNESDSSSEKGfSLPIKSKQCNISFSRSSPLTRHLRSvnHSGESLKPFSCpyslCGKLFSRNDALKR 341

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417663 341 HERIHTEEKPYKC--NQCDKVFSQ-----SHSLQIHKRTHTGEKPYVC--NQCGKAFADNSHLRRHKRTHTGEKPYECN- 410
Cdd:COG5048   342 HILLHTSISPAKEklLNSSSKFSPllnnePPQSLQQYKDLKNDKKSETlsNSCIRNFKRDSNLSLHIITHLSFRPYNCKn 421

                         410       420
                  ....*....|....*....|.
gi 1246417663 411 -QCGSAFSQNSYLRIHKRTHT 430
Cdd:COG5048   422 pPCSKSFNRHYNLIPHKKIHT 442
zf-H2C2_2 pfam13465
Zinc-finger double domain;
114-138 7.08e-05

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 39.66  E-value: 7.08e-05
                          10        20
                  ....*....|....*....|....*
gi 1246417663 114 LRRHKRTHTGEKPYKCNQCDKAFSQ 138
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
393-418 2.34e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 38.12  E-value: 2.34e-04
                          10        20
                  ....*....|....*....|....*.
gi 1246417663 393 HLRRHKRTHTGEKPYECNQCGSAFSQ 418
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
281-306 5.34e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 36.97  E-value: 5.34e-04
                          10        20
                  ....*....|....*....|....*.
gi 1246417663 281 NLRIHKRTHTGEKPYECNQCDKAFLQ 306
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
254-278 1.00e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 36.20  E-value: 1.00e-03
                          10        20
                  ....*....|....*....|....*
gi 1246417663 254 LRIHRRIHTGEKPYKCNQCDKAFAQ 278
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFKS 26
SFP1 COG5189
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 291-374 1.36e-03

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 40.86  E-value: 1.36e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417663 291 GEKPYECN--QCDKAFLQNINLKIHKR-AHTGEKSYECSQCGKafaryyhlqcHERIHTEEKPYKCNQCDKVFSQSHSLQ 367
Cdd:COG5189   346 DGKPYKCPveGCNKKYKNQNGLKYHMLhGHQNQKLHENPSPEK----------MNIFSAKDKPYRCEVCDKRYKNLNGLK 415


                  ....*..
gi 1246417663 368 IHkRTHT 374
Cdd:COG5189   416 YH-RKHS 421
SFP1 COG5189
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 124-234 2.07e-03

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 40.09  E-value: 2.07e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417663 124 EKPYKCNQCDKAFSQNGHLIIH---KRTHT-GEKPYECN--QCGKAFTDQSQLRIHKR-AHTGEKPYKCNQCDKaflqni 196
Cdd:COG5189   315 KLPCTNSSSNGKLAHGGERNIDtpsRMLKVkDGKPYKCPveGCNKKYKNQNGLKYHMLhGHQNQKLHENPSPEK------ 388

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 1246417663 197 nlriHKRAHTGEKPYKCNQCDKAFAQNGHLIIHkRTHT 234
Cdd:COG5189   389 ----MNIFSAKDKPYRCEVCDKRYKNLNGLKYH-RKHS 421
zf-H2C2_2 pfam13465
Zinc-finger double domain;
365-389 2.54e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.04  E-value: 2.54e-03
                          10        20
                  ....*....|....*....|....*
gi 1246417663 365 SLQIHKRTHTGEKPYVCNQCGKAFA 389
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFK 25
zf-H2C2_2 pfam13465
Zinc-finger double domain;
197-222 2.78e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.04  E-value: 2.78e-03
                          10        20
                  ....*....|....*....|....*.
gi 1246417663 197 NLRIHKRAHTGEKPYKCNQCDKAFAQ 222
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
225-249 3.48e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 34.65  E-value: 3.48e-03
                          10        20
                  ....*....|....*....|....*
gi 1246417663 225 HLIIHKRTHTGEKPYECNQCGKAFA 249
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFK 25
zf-H2C2_2 pfam13465
Zinc-finger double domain;
141-165 3.55e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 34.65  E-value: 3.55e-03
                          10        20
                  ....*....|....*....|....*
gi 1246417663 141 HLIIHKRTHTGEKPYECNQCGKAFT 165
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFK 25
SFP1 COG5189
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 347-402 4.35e-03

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 39.32  E-value: 4.35e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1246417663 347 EEKPYKCN--QCDKVFSQSHSLQIHK-------RTH------------TGEKPYVCNQCGKAFADNSHLRRHkRTHT 402
Cdd:COG5189   346 DGKPYKCPveGCNKKYKNQNGLKYHMlhghqnqKLHenpspekmnifsAKDKPYRCEVCDKRYKNLNGLKYH-RKHS 421
SFP1 COG5189
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 236-318 7.60e-03

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 38.55  E-value: 7.60e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1246417663 236 EKPYECNQCGKAFADQSQLRIH---RRIHT-GEKPYKCN--QCDKAFAQHSNLRIHK-------RTH------------T 290
Cdd:COG5189   315 KLPCTNSSSNGKLAHGGERNIDtpsRMLKVkDGKPYKCPveGCNKKYKNQNGLKYHMlhghqnqKLHenpspekmnifsA 394

                          90       100
                  ....*....|....*....|....*...
gi 1246417663 291 GEKPYECNQCDKAFLQNINLKIHkRAHT 318
Cdd:COG5189   395 KDKPYRCEVCDKRYKNLNGLKYH-RKHS 421
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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