NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|1243938452|ref|NP_001342105|]
View 

caspase-9 isoform 3 precursor [Mus musculus]

Protein Classification

caspase; caspase family protein( domain architecture ID 10169988)

caspase is a cysteine-dependent aspartate-directed protease that mediates programmed cell death; belongs to the peptidase C14 family| caspase family protein similar to caspases which are cysteine class enzymes that drive the terminal stages of apoptosis as well as other cellular remodeling and inflammatory events

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
CASc cd00032
Caspase, interleukin-1 beta converting enzyme (ICE) homologues; Cysteine-dependent ...
189-451 9.13e-105

Caspase, interleukin-1 beta converting enzyme (ICE) homologues; Cysteine-dependent aspartate-directed proteases that mediate programmed cell death (apoptosis). Caspases are synthesized as inactive zymogens and activated by proteolysis of the peptide backbone adjacent to an aspartate. The resulting two subunits associate to form an (alpha)2(beta)2-tetramer which is the active enzyme. Activation of caspases can be mediated by other caspase homologs.


:

Pssm-ID: 237997  Cd Length: 243  Bit Score: 311.07  E-value: 9.13e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1243938452 189 AYTLDSDPCGHCLIINNVNFCPssGLGTRTGSNLDRDKLEHRFRWLRFMVEVKNDLTAKKMVTALMEMAHRNHRALDCFV 268
Cdd:cd00032     1 IYKMNSKRRGLALIINNENFDK--GLKDRDGTDVDAENLTKLFESLGYEVEVKNNLTAEEILEELKEFASPDHSDSDSFV 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1243938452 269 VVILSHGCQashlqfpGAVYGTDGCSVSIEKIVNIFNGSGCPSLGGKPKLFFIQACGGEQKDHGFEVactssqgrtldsD 348
Cdd:cd00032    79 CVILSHGEE-------GGIYGTDGDVVPIDEITSLFNGDNCPSLAGKPKLFFIQACRGDELDLGVEV------------D 139
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1243938452 349 SEPDAVPYQEGPrplDQLDAVSSLPTPSDILVSYSTFPGFVSWRDKKSGSWYIETLDGILEQWARSEDLQSLLLRVANAV 428
Cdd:cd00032   140 SGADEPPDVETE---AEDDAVQTIPVEADFLVAYSTVPGYVSWRNTKKGSWFIQSLCQVLRKYAHSLDLLDILTKVNRKV 216
                         250       260
                  ....*....|....*....|....*..
gi 1243938452 429 SAKGT----YKQIPGCFNFLRKKLFFK 451
Cdd:cd00032   217 AEKFEsvngKKQMPCFRSTLTKKLYFF 243
CARD_CASP9 cd08326
Caspase activation and recruitment domain of Caspase-9; Caspase activation and recruitment ...
5-89 6.13e-41

Caspase activation and recruitment domain of Caspase-9; Caspase activation and recruitment domain (CARD) similar to that found in caspase-9 (CASP9, MCH6, APAF3), which interacts with the CARD of apoptotic protease-activating factor 1 (APAF-1). Caspases are aspartate-specific cysteine proteases with functions in apoptosis and immune signaling. Initiator caspases are the first to be activated following death- or inflammation-inducing signals. Caspase-9 is the initiator caspase associated with the intrinsic or mitochondrial pathway of apoptosis, induced by many pro-apoptotic signals. Together with APAF-1, it forms the heptameric 'apoptosome' in response to the release of cytochrome c from mitochondria. Activated caspase-9 cleaves and activates downstream effector caspases, like caspase-3, caspase-6, and caspase-7, resulting in apoptosis. In general, CARDs are death domains (DDs) associated with caspases. They are known to be important in the signaling pathways for apoptosis, inflammation and host-defense mechanisms. DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including PYRIN and DED (Death Effector Domain). They serve as adaptors in signaling pathways and can recruit other proteins into signaling complexes.


:

Pssm-ID: 176740  Cd Length: 84  Bit Score: 140.64  E-value: 6.13e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1243938452   5 DRQLLRRCRVRLVSELQVAELWDALLSRELFTRDMIEDIQAgSGSRRDQARQLVTDLETRGRQALPLFISCLEDTGQGTL 84
Cdd:cd08326     1 HRQILRRHRARLVEELQPKYLWDHLLSRGVFTPDMIEEIQA-AGSRRDQARQLLIDLETRGKQAFPAFLSALRETGQTDL 79

                  ....*
gi 1243938452  85 ASLLQ 89
Cdd:cd08326    80 AELLR 84
 
Name Accession Description Interval E-value
CASc cd00032
Caspase, interleukin-1 beta converting enzyme (ICE) homologues; Cysteine-dependent ...
189-451 9.13e-105

Caspase, interleukin-1 beta converting enzyme (ICE) homologues; Cysteine-dependent aspartate-directed proteases that mediate programmed cell death (apoptosis). Caspases are synthesized as inactive zymogens and activated by proteolysis of the peptide backbone adjacent to an aspartate. The resulting two subunits associate to form an (alpha)2(beta)2-tetramer which is the active enzyme. Activation of caspases can be mediated by other caspase homologs.


Pssm-ID: 237997  Cd Length: 243  Bit Score: 311.07  E-value: 9.13e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1243938452 189 AYTLDSDPCGHCLIINNVNFCPssGLGTRTGSNLDRDKLEHRFRWLRFMVEVKNDLTAKKMVTALMEMAHRNHRALDCFV 268
Cdd:cd00032     1 IYKMNSKRRGLALIINNENFDK--GLKDRDGTDVDAENLTKLFESLGYEVEVKNNLTAEEILEELKEFASPDHSDSDSFV 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1243938452 269 VVILSHGCQashlqfpGAVYGTDGCSVSIEKIVNIFNGSGCPSLGGKPKLFFIQACGGEQKDHGFEVactssqgrtldsD 348
Cdd:cd00032    79 CVILSHGEE-------GGIYGTDGDVVPIDEITSLFNGDNCPSLAGKPKLFFIQACRGDELDLGVEV------------D 139
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1243938452 349 SEPDAVPYQEGPrplDQLDAVSSLPTPSDILVSYSTFPGFVSWRDKKSGSWYIETLDGILEQWARSEDLQSLLLRVANAV 428
Cdd:cd00032   140 SGADEPPDVETE---AEDDAVQTIPVEADFLVAYSTVPGYVSWRNTKKGSWFIQSLCQVLRKYAHSLDLLDILTKVNRKV 216
                         250       260
                  ....*....|....*....|....*..
gi 1243938452 429 SAKGT----YKQIPGCFNFLRKKLFFK 451
Cdd:cd00032   217 AEKFEsvngKKQMPCFRSTLTKKLYFF 243
CASc smart00115
Caspase, interleukin-1 beta converting enzyme (ICE) homologues; Cysteine aspartases that ...
190-450 3.39e-94

Caspase, interleukin-1 beta converting enzyme (ICE) homologues; Cysteine aspartases that mediate programmed cell death (apoptosis). Caspases are synthesised as zymogens and activated by proteolysis of the peptide backbone adjacent to an aspartate. The resulting two subunits associate to form an (alpha)2(beta)2-tetramer which is the active enzyme. Activation of caspases can be mediated by other caspase homologues.


Pssm-ID: 214521  Cd Length: 241  Bit Score: 284.13  E-value: 3.39e-94
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1243938452  190 YTLDSDPCGHCLIINNVNFCpssGLGTRTGSNLDRDKLEHRFRWLRFMVEVKNDLTAKKMVTALMEMAHR-NHRALDCFV 268
Cdd:smart00115   1 YKMNSKPRGLALIINNENFH---SLPRRNGTDVDAENLTELFQSLGYEVQVKNNLTAEEMLEELKEFAAMpEHSDSDSFV 77
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1243938452  269 VVILSHGcqashlqFPGAVYGTDGCSVSIEKIVNIFNGSGCPSLGGKPKLFFIQACGGEQKDHGFEVactssqgrtldSD 348
Cdd:smart00115  78 CVLLSHG-------EEGGIYGTDGDPLPLDEIFSLFNGDNCPSLAGKPKLFFIQACRGDELDGGVPV-----------ED 139
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1243938452  349 SEPDavpyqeGPRPLDQlDAVSSLPTPSDILVSYSTFPGFVSWRDKKSGSWYIETLDGILEQWARSEDLQSLLLRVANAV 428
Cdd:smart00115 140 SVAD------PESEGED-DAIYKIPVEADFLAAYSTTPGYVSWRNPTRGSWFIQSLCQVLKEYARSLDLLDILTEVNRKV 212
                          250       260
                   ....*....|....*....|....*..
gi 1243938452  429 SAKGTY----KQIPGCFNF-LRKKLFF 450
Cdd:smart00115 213 ADKFESvnakKQMPTIESMtLTKKLYF 239
Peptidase_C14 pfam00656
Caspase domain;
198-449 1.48e-63

Caspase domain;


Pssm-ID: 425803  Cd Length: 213  Bit Score: 204.48  E-value: 1.48e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1243938452 198 GHCLIINNVNFCPSSGlgTRTGSNLDRDKLEHRFRWLRFMVEVKNDLTAKKMVTALMEMAHR-NHRALDCFVVVIL---S 273
Cdd:pfam00656   2 GLALIIGNNNYPGTKA--PLRGCDNDAEALAKTLKSLGFEVRVFEDLTAEEIRRALRDFAARaDHSDGDSFVVVLLyysG 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1243938452 274 HGCQashlQFPGAVYGTDGCSVSIEKIVNIFNGSGC-PSLGGKPKLFFIQACGGEQKDHGfevactssqgrtldsdsepd 352
Cdd:pfam00656  80 HGEQ----VPGGDIYGTDEYLVPVDALTNLFTGDDClPSLVGKPKLFIIDACRGNLEDGG-------------------- 135
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1243938452 353 avpyqegprpldqldavsslPTPSDILVSYSTFPGFVSWRDKKSGSWYIETLDGILEQWARSEDLQSLLLRVANAVSAKG 432
Cdd:pfam00656 136 --------------------VVEADFLVAYSTAPGQVSWRNTGSGSWFIQALCQVLREYGHGLDLLSLLTKVRRRVAEAT 195
                         250
                  ....*....|....*...
gi 1243938452 433 TYKQIPGCF-NFLRKKLF 449
Cdd:pfam00656 196 GKKQMPCLSsSTLTKKFY 213
CARD_CASP9 cd08326
Caspase activation and recruitment domain of Caspase-9; Caspase activation and recruitment ...
5-89 6.13e-41

Caspase activation and recruitment domain of Caspase-9; Caspase activation and recruitment domain (CARD) similar to that found in caspase-9 (CASP9, MCH6, APAF3), which interacts with the CARD of apoptotic protease-activating factor 1 (APAF-1). Caspases are aspartate-specific cysteine proteases with functions in apoptosis and immune signaling. Initiator caspases are the first to be activated following death- or inflammation-inducing signals. Caspase-9 is the initiator caspase associated with the intrinsic or mitochondrial pathway of apoptosis, induced by many pro-apoptotic signals. Together with APAF-1, it forms the heptameric 'apoptosome' in response to the release of cytochrome c from mitochondria. Activated caspase-9 cleaves and activates downstream effector caspases, like caspase-3, caspase-6, and caspase-7, resulting in apoptosis. In general, CARDs are death domains (DDs) associated with caspases. They are known to be important in the signaling pathways for apoptosis, inflammation and host-defense mechanisms. DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including PYRIN and DED (Death Effector Domain). They serve as adaptors in signaling pathways and can recruit other proteins into signaling complexes.


Pssm-ID: 176740  Cd Length: 84  Bit Score: 140.64  E-value: 6.13e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1243938452   5 DRQLLRRCRVRLVSELQVAELWDALLSRELFTRDMIEDIQAgSGSRRDQARQLVTDLETRGRQALPLFISCLEDTGQGTL 84
Cdd:cd08326     1 HRQILRRHRARLVEELQPKYLWDHLLSRGVFTPDMIEEIQA-AGSRRDQARQLLIDLETRGKQAFPAFLSALRETGQTDL 79

                  ....*
gi 1243938452  85 ASLLQ 89
Cdd:cd08326    80 AELLR 84
CARD smart00114
Caspase recruitment domain; Motif contained in proteins involved in apoptotic signalling. ...
1-88 2.73e-22

Caspase recruitment domain; Motif contained in proteins involved in apoptotic signalling. Mediates homodimerisation. Structure consists of six antiparallel helices arranged in a topology homologue to the DEATH and the DED domain.


Pssm-ID: 128424  Cd Length: 88  Bit Score: 90.47  E-value: 2.73e-22
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1243938452    1 MDEADRQLLRRCRVRLVSELQVAELWDALLSRELFTRDMIEDIQAGSGSRRDqARQLVTDLETRGRQALPLFISCLEDTg 80
Cdd:smart00114   1 MAERDKRLLRRNRVRLGEELGVDGLLDYLVEKNVLTEKEIEAIKAATTKLRD-KRELVDSLQKRGSQAFDTFLDSLQET- 78

                   ....*...
gi 1243938452   81 QGTLASLL 88
Cdd:smart00114  79 DQKLADFL 86
CARD pfam00619
Caspase recruitment domain; Motif contained in proteins involved in apoptotic signaling. ...
6-91 4.89e-19

Caspase recruitment domain; Motif contained in proteins involved in apoptotic signaling. Predicted to possess a DEATH (pfam00531) domain-like fold.


Pssm-ID: 459874 [Multi-domain]  Cd Length: 85  Bit Score: 81.45  E-value: 4.89e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1243938452   6 RQLLRRCRVRLVSELQ-VAELWDALLSRELFTRDMIEDIQAgSGSRRDQARQLVTDLETRGRQALPLFISCLEDtGQGTL 84
Cdd:pfam00619   1 RKLLKKNRVALVERLGtLDGLLDYLLEKNVLTEEEEEKIKA-NPTRLDKARELLDLVLKKGPKACQIFLEALKE-GDPDL 78

                  ....*..
gi 1243938452  85 ASLLQSG 91
Cdd:pfam00619  79 ASDLEGL 85
 
Name Accession Description Interval E-value
CASc cd00032
Caspase, interleukin-1 beta converting enzyme (ICE) homologues; Cysteine-dependent ...
189-451 9.13e-105

Caspase, interleukin-1 beta converting enzyme (ICE) homologues; Cysteine-dependent aspartate-directed proteases that mediate programmed cell death (apoptosis). Caspases are synthesized as inactive zymogens and activated by proteolysis of the peptide backbone adjacent to an aspartate. The resulting two subunits associate to form an (alpha)2(beta)2-tetramer which is the active enzyme. Activation of caspases can be mediated by other caspase homologs.


Pssm-ID: 237997  Cd Length: 243  Bit Score: 311.07  E-value: 9.13e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1243938452 189 AYTLDSDPCGHCLIINNVNFCPssGLGTRTGSNLDRDKLEHRFRWLRFMVEVKNDLTAKKMVTALMEMAHRNHRALDCFV 268
Cdd:cd00032     1 IYKMNSKRRGLALIINNENFDK--GLKDRDGTDVDAENLTKLFESLGYEVEVKNNLTAEEILEELKEFASPDHSDSDSFV 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1243938452 269 VVILSHGCQashlqfpGAVYGTDGCSVSIEKIVNIFNGSGCPSLGGKPKLFFIQACGGEQKDHGFEVactssqgrtldsD 348
Cdd:cd00032    79 CVILSHGEE-------GGIYGTDGDVVPIDEITSLFNGDNCPSLAGKPKLFFIQACRGDELDLGVEV------------D 139
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1243938452 349 SEPDAVPYQEGPrplDQLDAVSSLPTPSDILVSYSTFPGFVSWRDKKSGSWYIETLDGILEQWARSEDLQSLLLRVANAV 428
Cdd:cd00032   140 SGADEPPDVETE---AEDDAVQTIPVEADFLVAYSTVPGYVSWRNTKKGSWFIQSLCQVLRKYAHSLDLLDILTKVNRKV 216
                         250       260
                  ....*....|....*....|....*..
gi 1243938452 429 SAKGT----YKQIPGCFNFLRKKLFFK 451
Cdd:cd00032   217 AEKFEsvngKKQMPCFRSTLTKKLYFF 243
CASc smart00115
Caspase, interleukin-1 beta converting enzyme (ICE) homologues; Cysteine aspartases that ...
190-450 3.39e-94

Caspase, interleukin-1 beta converting enzyme (ICE) homologues; Cysteine aspartases that mediate programmed cell death (apoptosis). Caspases are synthesised as zymogens and activated by proteolysis of the peptide backbone adjacent to an aspartate. The resulting two subunits associate to form an (alpha)2(beta)2-tetramer which is the active enzyme. Activation of caspases can be mediated by other caspase homologues.


Pssm-ID: 214521  Cd Length: 241  Bit Score: 284.13  E-value: 3.39e-94
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1243938452  190 YTLDSDPCGHCLIINNVNFCpssGLGTRTGSNLDRDKLEHRFRWLRFMVEVKNDLTAKKMVTALMEMAHR-NHRALDCFV 268
Cdd:smart00115   1 YKMNSKPRGLALIINNENFH---SLPRRNGTDVDAENLTELFQSLGYEVQVKNNLTAEEMLEELKEFAAMpEHSDSDSFV 77
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1243938452  269 VVILSHGcqashlqFPGAVYGTDGCSVSIEKIVNIFNGSGCPSLGGKPKLFFIQACGGEQKDHGFEVactssqgrtldSD 348
Cdd:smart00115  78 CVLLSHG-------EEGGIYGTDGDPLPLDEIFSLFNGDNCPSLAGKPKLFFIQACRGDELDGGVPV-----------ED 139
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1243938452  349 SEPDavpyqeGPRPLDQlDAVSSLPTPSDILVSYSTFPGFVSWRDKKSGSWYIETLDGILEQWARSEDLQSLLLRVANAV 428
Cdd:smart00115 140 SVAD------PESEGED-DAIYKIPVEADFLAAYSTTPGYVSWRNPTRGSWFIQSLCQVLKEYARSLDLLDILTEVNRKV 212
                          250       260
                   ....*....|....*....|....*..
gi 1243938452  429 SAKGTY----KQIPGCFNF-LRKKLFF 450
Cdd:smart00115 213 ADKFESvnakKQMPTIESMtLTKKLYF 239
Peptidase_C14 pfam00656
Caspase domain;
198-449 1.48e-63

Caspase domain;


Pssm-ID: 425803  Cd Length: 213  Bit Score: 204.48  E-value: 1.48e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1243938452 198 GHCLIINNVNFCPSSGlgTRTGSNLDRDKLEHRFRWLRFMVEVKNDLTAKKMVTALMEMAHR-NHRALDCFVVVIL---S 273
Cdd:pfam00656   2 GLALIIGNNNYPGTKA--PLRGCDNDAEALAKTLKSLGFEVRVFEDLTAEEIRRALRDFAARaDHSDGDSFVVVLLyysG 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1243938452 274 HGCQashlQFPGAVYGTDGCSVSIEKIVNIFNGSGC-PSLGGKPKLFFIQACGGEQKDHGfevactssqgrtldsdsepd 352
Cdd:pfam00656  80 HGEQ----VPGGDIYGTDEYLVPVDALTNLFTGDDClPSLVGKPKLFIIDACRGNLEDGG-------------------- 135
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1243938452 353 avpyqegprpldqldavsslPTPSDILVSYSTFPGFVSWRDKKSGSWYIETLDGILEQWARSEDLQSLLLRVANAVSAKG 432
Cdd:pfam00656 136 --------------------VVEADFLVAYSTAPGQVSWRNTGSGSWFIQALCQVLREYGHGLDLLSLLTKVRRRVAEAT 195
                         250
                  ....*....|....*...
gi 1243938452 433 TYKQIPGCF-NFLRKKLF 449
Cdd:pfam00656 196 GKKQMPCLSsSTLTKKFY 213
CARD_CASP9 cd08326
Caspase activation and recruitment domain of Caspase-9; Caspase activation and recruitment ...
5-89 6.13e-41

Caspase activation and recruitment domain of Caspase-9; Caspase activation and recruitment domain (CARD) similar to that found in caspase-9 (CASP9, MCH6, APAF3), which interacts with the CARD of apoptotic protease-activating factor 1 (APAF-1). Caspases are aspartate-specific cysteine proteases with functions in apoptosis and immune signaling. Initiator caspases are the first to be activated following death- or inflammation-inducing signals. Caspase-9 is the initiator caspase associated with the intrinsic or mitochondrial pathway of apoptosis, induced by many pro-apoptotic signals. Together with APAF-1, it forms the heptameric 'apoptosome' in response to the release of cytochrome c from mitochondria. Activated caspase-9 cleaves and activates downstream effector caspases, like caspase-3, caspase-6, and caspase-7, resulting in apoptosis. In general, CARDs are death domains (DDs) associated with caspases. They are known to be important in the signaling pathways for apoptosis, inflammation and host-defense mechanisms. DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including PYRIN and DED (Death Effector Domain). They serve as adaptors in signaling pathways and can recruit other proteins into signaling complexes.


Pssm-ID: 176740  Cd Length: 84  Bit Score: 140.64  E-value: 6.13e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1243938452   5 DRQLLRRCRVRLVSELQVAELWDALLSRELFTRDMIEDIQAgSGSRRDQARQLVTDLETRGRQALPLFISCLEDTGQGTL 84
Cdd:cd08326     1 HRQILRRHRARLVEELQPKYLWDHLLSRGVFTPDMIEEIQA-AGSRRDQARQLLIDLETRGKQAFPAFLSALRETGQTDL 79

                  ....*
gi 1243938452  85 ASLLQ 89
Cdd:cd08326    80 AELLR 84
CARD smart00114
Caspase recruitment domain; Motif contained in proteins involved in apoptotic signalling. ...
1-88 2.73e-22

Caspase recruitment domain; Motif contained in proteins involved in apoptotic signalling. Mediates homodimerisation. Structure consists of six antiparallel helices arranged in a topology homologue to the DEATH and the DED domain.


Pssm-ID: 128424  Cd Length: 88  Bit Score: 90.47  E-value: 2.73e-22
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1243938452    1 MDEADRQLLRRCRVRLVSELQVAELWDALLSRELFTRDMIEDIQAGSGSRRDqARQLVTDLETRGRQALPLFISCLEDTg 80
Cdd:smart00114   1 MAERDKRLLRRNRVRLGEELGVDGLLDYLVEKNVLTEKEIEAIKAATTKLRD-KRELVDSLQKRGSQAFDTFLDSLQET- 78

                   ....*...
gi 1243938452   81 QGTLASLL 88
Cdd:smart00114  79 DQKLADFL 86
CARD cd01671
Caspase activation and recruitment domain: a protein-protein interaction domain; Caspase ...
9-88 2.58e-20

Caspase activation and recruitment domain: a protein-protein interaction domain; Caspase activation and recruitment domains (CARDs) are death domains (DDs) found associated with caspases. Caspases are aspartate-specific cysteine proteases with functions in apoptosis, immune signaling, inflammation, and host-defense mechanisms. In addition to caspases, proteins containing CARDs include adaptor proteins such as RAIDD, CARD9, and RIG-I-like helicases, which can form multiprotein complexes and play important roles in mediating the signals to induce immune and inflammatory responses. In general, DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including PYRIN and DED (Death Effector Domain). They serve as adaptors in signaling pathways and can recruit other proteins into signaling complexes.


Pssm-ID: 260018 [Multi-domain]  Cd Length: 79  Bit Score: 84.88  E-value: 2.58e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1243938452   9 LRRCRVRLVSELQVAELWDALLSRELFTRDMIEDIQAGSgSRRDQARQLVTDLETRGRQALPLFISCLEDTGQGTLASLL 88
Cdd:cd01671     1 LRKNRVELVEDLDVEDILDHLIQKGVLTEEDKEEILSEK-TRQDKARKLLDILPRRGPKAFEVFCEALRETGQPHLAELL 79
CARD pfam00619
Caspase recruitment domain; Motif contained in proteins involved in apoptotic signaling. ...
6-91 4.89e-19

Caspase recruitment domain; Motif contained in proteins involved in apoptotic signaling. Predicted to possess a DEATH (pfam00531) domain-like fold.


Pssm-ID: 459874 [Multi-domain]  Cd Length: 85  Bit Score: 81.45  E-value: 4.89e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1243938452   6 RQLLRRCRVRLVSELQ-VAELWDALLSRELFTRDMIEDIQAgSGSRRDQARQLVTDLETRGRQALPLFISCLEDtGQGTL 84
Cdd:pfam00619   1 RKLLKKNRVALVERLGtLDGLLDYLLEKNVLTEEEEEKIKA-NPTRLDKARELLDLVLKKGPKACQIFLEALKE-GDPDL 78

                  ....*..
gi 1243938452  85 ASLLQSG 91
Cdd:pfam00619  79 ASDLEGL 85
DD cd08304
Death Domain Superfamily of protein-protein interaction domains; The Death Domain (DD) ...
13-88 5.95e-13

Death Domain Superfamily of protein-protein interaction domains; The Death Domain (DD) superfamily includes the DD, Pyrin, CARD (Caspase activation and recruitment domain) and DED (Death Effector Domain) families. DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily. They serve as adaptors in signaling pathways and can recruit other proteins into signaling complexes. They are prominent components of the programmed cell death (apoptosis) pathway and are found in a number of other signaling pathways including those that impact innate immunity, inflammation, differentiation, and cancer.


Pssm-ID: 176720  Cd Length: 69  Bit Score: 63.73  E-value: 5.95e-13
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1243938452  13 RVRLVSEL---QVAELWDALLSRelFTRDMIEDIqagsgsrrDQARQLVTDLETRGRQALPLFISCLEDTGQGTLASLL 88
Cdd:cd08304     1 RLDLCENLtleVLQQLKTALKSR--IPPDQVEQI--------SAANELLNILESQYNHTLQLLFALFEDLGLHNLARLL 69
CARD_CASP2 cd08332
Caspase activation and recruitment domain of Caspase-2; Caspase activation and recruitment ...
1-88 4.39e-12

Caspase activation and recruitment domain of Caspase-2; Caspase activation and recruitment domain (CARD) similar to that found in caspase-2. Caspases are aspartate-specific cysteine proteases with functions in apoptosis and immune signaling. Caspase-2 (also known as ICH1, NEDD2, or CASP2) is one of the most evolutionarily conserved caspases, and plays a role in apoptosis, DNA damage response, cell cycle regulation, and tumor suppression. It is localized in the nucleus and exhibits properties of both an initiator and an effector caspase. In general, CARDs are death domains (DDs) found associated with caspases. They are known to be important in the signaling pathways for apoptosis, inflammation, and host-defense mechanisms. DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including PYRIN and DED (Death Effector Domain). They serve as adaptors in signaling pathways and can recruit other proteins into signaling complexes.


Pssm-ID: 260040  Cd Length: 87  Bit Score: 61.67  E-value: 4.39e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1243938452   1 MDEADRQLLRRCRVRLVSELQVAELWDALLSRELFTRDMIEDIQAGSGSRRdQARQLVTDLETRGRQALPLFISCLEDTG 80
Cdd:cd08332     1 MQKRHREALKKNRVKLAKELVLDELLIHLLQKDILTDSMVESIMAKPTSFS-QNVALLNLLPKRGPRAFSAFCEALRETS 79

                  ....*...
gi 1243938452  81 QGTLASLL 88
Cdd:cd08332    80 QEHLADLL 87
CARD_RAIDD cd08327
Caspase activation and recruitment domain of RIP-associated ICH-1 homologous protein with a ...
1-78 4.58e-07

Caspase activation and recruitment domain of RIP-associated ICH-1 homologous protein with a death domain; Caspase activation and recruitment domain (CARD) of RAIDD (RIP-associated ICH-1 homologous protein with a death domain), also known as CRADD (Caspase and RIP adaptor). RAIDD is an adaptor protein that together with the p53-inducible protein PIDD and caspase-2, forms the PIDDosome complex, which is required for caspase-2 activation and plays a role in mediating stress-induced apoptosis. RAIDD contains an N-terminal CARD, which interacts with the caspase-2 CARD, and a C-terminal Death domain (DD), which interacts with the DD of PIDD. In general, CARDs are DDs associated with caspases. They are known to be important in the signaling pathways for apoptosis, inflammation and host-defense mechanisms. DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including PYRIN and DED (Death Effector Domain). They serve as adaptors in signaling pathways and can recruit other proteins into signaling complexes.


Pssm-ID: 260037  Cd Length: 94  Bit Score: 47.84  E-value: 4.58e-07
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1243938452   1 MDEADRQLLRRCRVRLVSELQVAEL-WDALLSRELFTRDMIEDIQAGSGSRRdQARQLVTDLETRGRQALPLFISCLED 78
Cdd:cd08327     1 MEPKHKQLLRSQRLELCAELLVDGLiVQYLYQEGILTESHVEEIQSQTTSRR-KTLKLLDILPNRGPKAFHAFLDSLEE 78
CARD_BCL10 cd08810
Caspase activation and recruitment domain of B-cell lymphoma 10; Caspase activation and ...
7-80 2.64e-04

Caspase activation and recruitment domain of B-cell lymphoma 10; Caspase activation and recruitment domain (CARD) similar to that found in BCL10 (B-cell lymphoma 10). BCL10 and Malt1 (mucosa-associated lymphoid tissue-lymphoma-translocation gene 1) are the integral components of CBM signalosomes. They associate with CARD9 to form M-CBM (CBM complex in myeloid immune cells) and with CARMA1 to form L-CBM (CBM complex in lymphoid immune cells), to mediate activation of NF-kB and MAPK by ITAM-coupled receptors expressed on immune cells. Both CARMA1 and CARD9 associate with BCL10 via a CARD-CARD interaction. In general, CARDs are death domains (DDs) found associated with caspases. They are known to be important in the signaling pathways for apoptosis, inflammation, and host-defense mechanisms. DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including PYRIN and DED (Death Effector Domain). They serve as adaptors in signaling pathways and can recruit other proteins into signaling complexes.


Pssm-ID: 260072 [Multi-domain]  Cd Length: 85  Bit Score: 39.64  E-value: 2.64e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1243938452   7 QLLRRCRVRLVSELQVAELWDALLSRELFTRDMIEDIQAGSgSRRDQARQLVTDLETRGRQALPLFISCLEDTG 80
Cdd:cd08810     3 EVLEEQRHYLCDKLIADRHFDYLRSKRILTRDDCEEIQCRT-TRKKRVDKLLDILAREGPDGLDALIESIRRNG 75
CARD_APAF1 cd08323
Caspase activation and recruitment domain similar to that found in Apoptotic ...
8-91 4.42e-03

Caspase activation and recruitment domain similar to that found in Apoptotic Protease-Activating Factor 1; Caspase activation and recruitment domain (CARD) similar to that found in apoptotic protease-activating factor 1 (APAF-1), which is an activator of caspase-9. APAF-1 contains WD-40 repeats, a CARD, and an ATPase domain. Upon stimulation, APAF-1, together with caspase-9, forms the heptameric 'apoptosome', which leads to the processing and activation of caspase-9, starting a caspase cascade which leads to apoptosis. In general, CARDs are death domains (DDs) found associated with caspases. They are known to be important in the signaling pathways for apoptosis, inflammation, and host-defense mechanisms. DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including PYRIN and DED (Death Effector Domain). They serve as adaptors in signaling pathways and can recruit other proteins into signaling complexes.


Pssm-ID: 260034  Cd Length: 86  Bit Score: 36.33  E-value: 4.42e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1243938452   8 LLRRCRVRLVSELQVAELWDALLSRELFTRDMIEDIQAgSGSRRDQARQLVTDLETRGRQALPLFISCLEDTGQGTLASL 87
Cdd:cd08323     2 CLLQHRAALERDIKTSYIMDHMISDGVLTLSEEEKVRA-QPTQQERAAALIKIILRKDNDAYISFYNALLHEGYKDLAAL 80

                  ....
gi 1243938452  88 LQSG 91
Cdd:cd08323    81 LHDG 84
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH