Translation initiation factor SUI1 family protein [Arabidopsis thaliana]
SUI1 family translation initiation factor( domain architecture ID 10795724)
SUI1 family translation initiation factor is involved in the regulation of translation initiation, recognizing the start codon on mRNA by the ribosome and interacting with other components of the translation initiation complex to facilitate the assembly of the translation machinery.
List of domain hits
Name | Accession | Description | Interval | E-value | |||
SUI1_MOF2 | TIGR01160 | translation initiation factor SUI1, eukaryotic; Alternate name: MOF2. A similar protein family ... |
5-113 | 2.11e-62 | |||
translation initiation factor SUI1, eukaryotic; Alternate name: MOF2. A similar protein family (see TIGRFAMs model TIGR01158) is found in prokaryotes. The human proteins complements a yeast SUI1 mutatation. [Protein synthesis, Translation factors] : Pssm-ID: 130228 Cd Length: 110 Bit Score: 185.42 E-value: 2.11e-62
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Name | Accession | Description | Interval | E-value | |||
SUI1_MOF2 | TIGR01160 | translation initiation factor SUI1, eukaryotic; Alternate name: MOF2. A similar protein family ... |
5-113 | 2.11e-62 | |||
translation initiation factor SUI1, eukaryotic; Alternate name: MOF2. A similar protein family (see TIGRFAMs model TIGR01158) is found in prokaryotes. The human proteins complements a yeast SUI1 mutatation. [Protein synthesis, Translation factors] Pssm-ID: 130228 Cd Length: 110 Bit Score: 185.42 E-value: 2.11e-62
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eIF1_SUI1 | cd11566 | Eukaryotic initiation factor 1; eIF1/SUI1 (eukaryotic initiation factor 1) plays an important ... |
29-112 | 1.28e-49 | |||
Eukaryotic initiation factor 1; eIF1/SUI1 (eukaryotic initiation factor 1) plays an important role in accurate initiator codon recognition during translation initiation. eIF1 interacts with 18S rRNA in the 40S ribosomal subunit during eukaryotic translation initiation. Point mutations in the yeast eIF1 implicate the protein in maintaining accurate start-site selection but its mechanism of action is unknown. Pssm-ID: 211318 Cd Length: 84 Bit Score: 152.30 E-value: 1.28e-49
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SUI1 | pfam01253 | Translation initiation factor SUI1; |
28-102 | 4.23e-25 | |||
Translation initiation factor SUI1; Pssm-ID: 460137 Cd Length: 75 Bit Score: 89.80 E-value: 4.23e-25
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PRK00939 | PRK00939 | stress response translation initiation inhibitor YciH; |
31-109 | 7.31e-08 | |||
stress response translation initiation inhibitor YciH; Pssm-ID: 179173 Cd Length: 99 Bit Score: 46.45 E-value: 7.31e-08
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SUI1 | COG0023 | Translation initiation factor 1 (eIF-1/SUI1) [Translation, ribosomal structure and biogenesis]; ... |
1-101 | 8.11e-03 | |||
Translation initiation factor 1 (eIF-1/SUI1) [Translation, ribosomal structure and biogenesis]; Translation initiation factor 1 (eIF-1/SUI1) is part of the Pathway/BioSystem: Translation factors Pssm-ID: 439794 Cd Length: 112 Bit Score: 33.25 E-value: 8.11e-03
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Name | Accession | Description | Interval | E-value | |||
SUI1_MOF2 | TIGR01160 | translation initiation factor SUI1, eukaryotic; Alternate name: MOF2. A similar protein family ... |
5-113 | 2.11e-62 | |||
translation initiation factor SUI1, eukaryotic; Alternate name: MOF2. A similar protein family (see TIGRFAMs model TIGR01158) is found in prokaryotes. The human proteins complements a yeast SUI1 mutatation. [Protein synthesis, Translation factors] Pssm-ID: 130228 Cd Length: 110 Bit Score: 185.42 E-value: 2.11e-62
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eIF1_SUI1 | cd11566 | Eukaryotic initiation factor 1; eIF1/SUI1 (eukaryotic initiation factor 1) plays an important ... |
29-112 | 1.28e-49 | |||
Eukaryotic initiation factor 1; eIF1/SUI1 (eukaryotic initiation factor 1) plays an important role in accurate initiator codon recognition during translation initiation. eIF1 interacts with 18S rRNA in the 40S ribosomal subunit during eukaryotic translation initiation. Point mutations in the yeast eIF1 implicate the protein in maintaining accurate start-site selection but its mechanism of action is unknown. Pssm-ID: 211318 Cd Length: 84 Bit Score: 152.30 E-value: 1.28e-49
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SUI1 | pfam01253 | Translation initiation factor SUI1; |
28-102 | 4.23e-25 | |||
Translation initiation factor SUI1; Pssm-ID: 460137 Cd Length: 75 Bit Score: 89.80 E-value: 4.23e-25
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eIF1_SUI1_like | cd00474 | Eukaryotic initiation factor 1 and related proteins; Members of the eIF1/SUI1 (eukaryotic ... |
31-111 | 9.91e-17 | |||
Eukaryotic initiation factor 1 and related proteins; Members of the eIF1/SUI1 (eukaryotic initiation factor 1) family are found in eukaryotes, archaea, and some bacteria; eukaryotic members are understood to play an important role in accurate initiator codon recognition during translation initiation. eIF1 interacts with 18S rRNA in the 40S ribosomal subunit during eukaryotic translation initiation. Point mutations in the yeast eIF1 implicate the protein in maintaining accurate start-site selection but its mechanism of action is unknown. The function of non-eukaryotic family members is also unclear. Pssm-ID: 211317 Cd Length: 78 Bit Score: 68.61 E-value: 9.91e-17
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DENR_C | cd11607 | C-terminal domain of DENR and related proteins; DENR (density regulated protein), together ... |
31-110 | 5.00e-09 | |||
C-terminal domain of DENR and related proteins; DENR (density regulated protein), together with MCT-1 (multiple copies T cell malignancies), has been shown to have similar function as eIF2D translation initiation factor (also known as ligatin), which is involved in the recruitment and delivery of aminoacyl-tRNAs to the P-site of the eukaryotic ribosome in a GTP-independent manner. Pssm-ID: 211320 Cd Length: 86 Bit Score: 49.09 E-value: 5.00e-09
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eIF2D_C | cd11608 | C-terminal domain of eIF2D and related proteins; eIF2D translation initiation factor (also ... |
31-105 | 5.80e-08 | |||
C-terminal domain of eIF2D and related proteins; eIF2D translation initiation factor (also known as ligatin) is involved in the recruitment and delivery of aminoacyl-tRNAs to the P-site of the eukaryotic ribosome in a GTP-independent manner. Pssm-ID: 211321 Cd Length: 85 Bit Score: 46.40 E-value: 5.80e-08
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PRK00939 | PRK00939 | stress response translation initiation inhibitor YciH; |
31-109 | 7.31e-08 | |||
stress response translation initiation inhibitor YciH; Pssm-ID: 179173 Cd Length: 99 Bit Score: 46.45 E-value: 7.31e-08
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YciH_like | cd11567 | Homologs of eIF1/SUI1 including Escherichia coli YciH; Members of the eIF1/SUI1 (eukaryotic ... |
31-101 | 1.74e-05 | |||
Homologs of eIF1/SUI1 including Escherichia coli YciH; Members of the eIF1/SUI1 (eukaryotic initiation factor 1) family are found in eukaryotes, archaea, and some bacteria; eukaryotic members are understood to play an important role in accurate initiator codon recognition during translation initiation. The function of non-eukaryotic family members is unclear. Escherichia coli YciH is a non-essential protein and was reported to be able to perform some of the functions of IF3 in prokaryotic initiation. Pssm-ID: 211319 Cd Length: 76 Bit Score: 39.77 E-value: 1.74e-05
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PRK07451 | PRK07451 | translation initiation factor; |
33-101 | 2.55e-04 | |||
translation initiation factor; Pssm-ID: 236021 Cd Length: 115 Bit Score: 37.45 E-value: 2.55e-04
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SUI1 | COG0023 | Translation initiation factor 1 (eIF-1/SUI1) [Translation, ribosomal structure and biogenesis]; ... |
1-101 | 8.11e-03 | |||
Translation initiation factor 1 (eIF-1/SUI1) [Translation, ribosomal structure and biogenesis]; Translation initiation factor 1 (eIF-1/SUI1) is part of the Pathway/BioSystem: Translation factors Pssm-ID: 439794 Cd Length: 112 Bit Score: 33.25 E-value: 8.11e-03
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Blast search parameters | ||||
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