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Conserved domains on  [gi|1063722468|ref|NP_001329484|]
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indole-3-acetic acid inducible 14 [Arabidopsis thaliana]

Protein Classification

AUX/IAA family protein( domain architecture ID 10491747)

AUX/IAA (Auxin/Indole-3-Acetic Acid) family proteins have specific domains that interact with ARFs (auxin response factors) and inhibit the transcription of genes activated by ARFs.

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
AUX_IAA pfam02309
AUX/IAA family; Transcription of the AUX/IAA family of genes is rapidly induced by the plant ...
5-195 1.91e-85

AUX/IAA family; Transcription of the AUX/IAA family of genes is rapidly induced by the plant hormone auxin. Some members of this family are longer and contain an N terminal DNA binding domain. The function of this region is uncertain.


:

Pssm-ID: 460529  Cd Length: 188  Bit Score: 249.87  E-value: 1.91e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063722468   5 ETELCLGLPGGTETV--------ESPAKSGVGNKRGFSetvdlklnlqsnkqghvdlntngapkektflkdpskppakaQ 76
Cdd:pfam02309   1 ETELRLGLPGGGEGEaaagsespERQDESKSGAKRGFS-----------------------------------------Q 39
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063722468  77 VVGWPPVRNYRKNVMANQKSGEAEEAMS----SGGGTVAFVKVSMDGAPYLRKVDLKMYTSYKDLSDALAKMFSSFTMGS 152
Cdd:pfam02309  40 VVGWPPIRSFRKNTLATSSSKNSKEEAEgkagEGCKKALFVKVSMDGAPYLRKVDLKAYDSYQELSSALEKMFSCFTIGQ 119
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*
gi 1063722468 153 YGAQGM--IDFMNESKVMDLLNSSEYVPSYEDKDGDWMLVGDVPW 195
Cdd:pfam02309 120 CGSHGMpgRDGLNESKLSDLLDGSEYVLTYEDKDGDWMLVGDVPW 164
 
Name Accession Description Interval E-value
AUX_IAA pfam02309
AUX/IAA family; Transcription of the AUX/IAA family of genes is rapidly induced by the plant ...
5-195 1.91e-85

AUX/IAA family; Transcription of the AUX/IAA family of genes is rapidly induced by the plant hormone auxin. Some members of this family are longer and contain an N terminal DNA binding domain. The function of this region is uncertain.


Pssm-ID: 460529  Cd Length: 188  Bit Score: 249.87  E-value: 1.91e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063722468   5 ETELCLGLPGGTETV--------ESPAKSGVGNKRGFSetvdlklnlqsnkqghvdlntngapkektflkdpskppakaQ 76
Cdd:pfam02309   1 ETELRLGLPGGGEGEaaagsespERQDESKSGAKRGFS-----------------------------------------Q 39
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063722468  77 VVGWPPVRNYRKNVMANQKSGEAEEAMS----SGGGTVAFVKVSMDGAPYLRKVDLKMYTSYKDLSDALAKMFSSFTMGS 152
Cdd:pfam02309  40 VVGWPPIRSFRKNTLATSSSKNSKEEAEgkagEGCKKALFVKVSMDGAPYLRKVDLKAYDSYQELSSALEKMFSCFTIGQ 119
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*
gi 1063722468 153 YGAQGM--IDFMNESKVMDLLNSSEYVPSYEDKDGDWMLVGDVPW 195
Cdd:pfam02309 120 CGSHGMpgRDGLNESKLSDLLDGSEYVLTYEDKDGDWMLVGDVPW 164
 
Name Accession Description Interval E-value
AUX_IAA pfam02309
AUX/IAA family; Transcription of the AUX/IAA family of genes is rapidly induced by the plant ...
5-195 1.91e-85

AUX/IAA family; Transcription of the AUX/IAA family of genes is rapidly induced by the plant hormone auxin. Some members of this family are longer and contain an N terminal DNA binding domain. The function of this region is uncertain.


Pssm-ID: 460529  Cd Length: 188  Bit Score: 249.87  E-value: 1.91e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063722468   5 ETELCLGLPGGTETV--------ESPAKSGVGNKRGFSetvdlklnlqsnkqghvdlntngapkektflkdpskppakaQ 76
Cdd:pfam02309   1 ETELRLGLPGGGEGEaaagsespERQDESKSGAKRGFS-----------------------------------------Q 39
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063722468  77 VVGWPPVRNYRKNVMANQKSGEAEEAMS----SGGGTVAFVKVSMDGAPYLRKVDLKMYTSYKDLSDALAKMFSSFTMGS 152
Cdd:pfam02309  40 VVGWPPIRSFRKNTLATSSSKNSKEEAEgkagEGCKKALFVKVSMDGAPYLRKVDLKAYDSYQELSSALEKMFSCFTIGQ 119
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*
gi 1063722468 153 YGAQGM--IDFMNESKVMDLLNSSEYVPSYEDKDGDWMLVGDVPW 195
Cdd:pfam02309 120 CGSHGMpgRDGLNESKLSDLLDGSEYVLTYEDKDGDWMLVGDVPW 164
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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