VQ motif-containing protein [Arabidopsis thaliana]
Protein Classification
VQ motif-containing protein( domain architecture ID 10529371)
VQ motif-containing protein similar to Arabidopsis thaliana protein MKS1, a regulator of plant defense response
List of domain hits
| Name | Accession | Description | Interval | E-value | ||
| VQ | pfam05678 | VQ motif; This short motif is found in a variety of plant proteins. These proteins vary ... |
123-150 | 1.41e-09 | ||
VQ motif; This short motif is found in a variety of plant proteins. These proteins vary greatly in length and are mostly composed of low complexity regions. They all conserve a short motif FXhVQChTG, where X is any amino acid and h is a hydrophobic amino acid. The function of this motif is uncertain, however one protein in this family has been found to bind the SigA sigma factor Swiss:Q9LDH1. It would seem plausible that this motif is needed for this activity and that this whole family might be involved in modulating plastid sigma factors (Bateman A pers. obs.). : Pssm-ID: 461711 Cd Length: 28 Bit Score: 52.39 E-value: 1.41e-09
|
||||||
| Name | Accession | Description | Interval | E-value | ||
| VQ | pfam05678 | VQ motif; This short motif is found in a variety of plant proteins. These proteins vary ... |
123-150 | 1.41e-09 | ||
VQ motif; This short motif is found in a variety of plant proteins. These proteins vary greatly in length and are mostly composed of low complexity regions. They all conserve a short motif FXhVQChTG, where X is any amino acid and h is a hydrophobic amino acid. The function of this motif is uncertain, however one protein in this family has been found to bind the SigA sigma factor Swiss:Q9LDH1. It would seem plausible that this motif is needed for this activity and that this whole family might be involved in modulating plastid sigma factors (Bateman A pers. obs.). Pssm-ID: 461711 Cd Length: 28 Bit Score: 52.39 E-value: 1.41e-09
|
||||||
| Name | Accession | Description | Interval | E-value | ||
| VQ | pfam05678 | VQ motif; This short motif is found in a variety of plant proteins. These proteins vary ... |
123-150 | 1.41e-09 | ||
VQ motif; This short motif is found in a variety of plant proteins. These proteins vary greatly in length and are mostly composed of low complexity regions. They all conserve a short motif FXhVQChTG, where X is any amino acid and h is a hydrophobic amino acid. The function of this motif is uncertain, however one protein in this family has been found to bind the SigA sigma factor Swiss:Q9LDH1. It would seem plausible that this motif is needed for this activity and that this whole family might be involved in modulating plastid sigma factors (Bateman A pers. obs.). Pssm-ID: 461711 Cd Length: 28 Bit Score: 52.39 E-value: 1.41e-09
|
||||||
| Blast search parameters | ||||
|
