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Conserved domains on  [gi|1063684798|ref|NP_001323230|]
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S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Arabidopsis thaliana]

Protein Classification

class I SAM-dependent methyltransferase( domain architecture ID 12042358)

class I SAM-dependent methyltransferase catalyzes the methylation of one or more specific substrates using S-adenosyl-L-methionine (SAM or AdoMet) as the methyl donor; similar to Arabidopsis thaliana methyltransferase PMTs

CATH:  2.20.25.110
EC:  2.1.1.-
PubMed:  12504684|12826405
SCOP:  3000118

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Methyltransf_29 pfam03141
Putative S-adenosyl-L-methionine-dependent methyltransferase; This family is a putative ...
231-719 0e+00

Putative S-adenosyl-L-methionine-dependent methyltransferase; This family is a putative S-adenosyl-L-methionine (SAM)-dependent methyltransferase.


:

Pssm-ID: 335237 [Multi-domain]  Cd Length: 506  Bit Score: 793.05  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063684798 231 NYMPCIDNDGLIGRLQS---YRHRERSCPK--KPVMCLVPLPhDGYDPPVSWPESKSKILYKNVAHPKLAAYIKKHNWVN 305
Cdd:pfam03141   1 DYIPCLDNKRAIKFLLSrerMEHRERHCPPpeEKLNCLVPPP-DGYKTPIPWPKSRDKVWYANVPHTKLAEEKGGQNWVK 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063684798 306 ETGEYLSFPQNQTTFNGNVLQYLEFIQEMVPDIEWGKNVRIVLDIGCSDSSFVAALLDKDVLTVSLGLKDDLVDLAQVAL 385
Cdd:pfam03141  80 VEGDKFTFPGGGTQFPHGADQYIDFIAQMIPDIAWGGRVRTALDVGCGVASFGAYLLSRDVLTMSFAPKDVHEAQVQFAL 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063684798 386 ERGFPTFVSSLASRRLPFPSGVFDTIHCAACGVHWHSHGGKLLLEMNRILRPNGYFILSS-------NNDKIEDDEAMTA 458
Cdd:pfam03141 160 ERGIPAMLGVLGTKRLPYPSRSFDLAHCSRCRIPWTANDGILLLEVDRVLRPGGYFVLSGppvyartEEDLQEIWKEMED 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063684798 459 LTASICWNILAHKTEeasemgVRIYQKPESNDIYELRRK-KNPPLCEDNENPDAAWYVPMKTCIYEIPSAIEQHGAEWPE 537
Cdd:pfam03141 240 LTKSLCWKLVAKKGD------IAIWQKPLNNSCYNKREPgKKPPLCKDSDDPDAAWYVPMEACITPLPEVSHEVGGGWPE 313
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063684798 538 EWPKRLETYPEWLT-------SKEKAMEDTNHWNAMVNKSY-LTGLGIDWLHIRNVMDMTAIYGGFGASLVKQNVWVMNV 609
Cdd:pfam03141 314 PWPARLTAVPPRLSsgqiggvSPESFKADTELWKKRVNKYKrLLKLGIDWGKVRNVMDMNAGFGGFAAALIDLPVWVMNV 393
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063684798 610 VPVHSPDTLPFIYERGLLGIYHDWCEPFGTYPRSYDLLHADHLFSRLKNRCKQpASIVVEMDRLTRPGGWVVVRDKVEIL 689
Cdd:pfam03141 394 VPVDSPNTLPVIYDRGLIGIYHDWCEAFSTYPRTYDLLHADHLFSLYKKRCNL-VDILLEMDRILRPEGFVIIRDSVDVL 472
                         490       500       510
                  ....*....|....*....|....*....|....
gi 1063684798 690 EPLEEILRSLHWEIRMTYAQD----KEGMLCAQK 719
Cdd:pfam03141 473 DKVKKIAKAMRWEVRMTDTEDgphvPEKILIAQK 506
 
Name Accession Description Interval E-value
Methyltransf_29 pfam03141
Putative S-adenosyl-L-methionine-dependent methyltransferase; This family is a putative ...
231-719 0e+00

Putative S-adenosyl-L-methionine-dependent methyltransferase; This family is a putative S-adenosyl-L-methionine (SAM)-dependent methyltransferase.


Pssm-ID: 335237 [Multi-domain]  Cd Length: 506  Bit Score: 793.05  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063684798 231 NYMPCIDNDGLIGRLQS---YRHRERSCPK--KPVMCLVPLPhDGYDPPVSWPESKSKILYKNVAHPKLAAYIKKHNWVN 305
Cdd:pfam03141   1 DYIPCLDNKRAIKFLLSrerMEHRERHCPPpeEKLNCLVPPP-DGYKTPIPWPKSRDKVWYANVPHTKLAEEKGGQNWVK 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063684798 306 ETGEYLSFPQNQTTFNGNVLQYLEFIQEMVPDIEWGKNVRIVLDIGCSDSSFVAALLDKDVLTVSLGLKDDLVDLAQVAL 385
Cdd:pfam03141  80 VEGDKFTFPGGGTQFPHGADQYIDFIAQMIPDIAWGGRVRTALDVGCGVASFGAYLLSRDVLTMSFAPKDVHEAQVQFAL 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063684798 386 ERGFPTFVSSLASRRLPFPSGVFDTIHCAACGVHWHSHGGKLLLEMNRILRPNGYFILSS-------NNDKIEDDEAMTA 458
Cdd:pfam03141 160 ERGIPAMLGVLGTKRLPYPSRSFDLAHCSRCRIPWTANDGILLLEVDRVLRPGGYFVLSGppvyartEEDLQEIWKEMED 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063684798 459 LTASICWNILAHKTEeasemgVRIYQKPESNDIYELRRK-KNPPLCEDNENPDAAWYVPMKTCIYEIPSAIEQHGAEWPE 537
Cdd:pfam03141 240 LTKSLCWKLVAKKGD------IAIWQKPLNNSCYNKREPgKKPPLCKDSDDPDAAWYVPMEACITPLPEVSHEVGGGWPE 313
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063684798 538 EWPKRLETYPEWLT-------SKEKAMEDTNHWNAMVNKSY-LTGLGIDWLHIRNVMDMTAIYGGFGASLVKQNVWVMNV 609
Cdd:pfam03141 314 PWPARLTAVPPRLSsgqiggvSPESFKADTELWKKRVNKYKrLLKLGIDWGKVRNVMDMNAGFGGFAAALIDLPVWVMNV 393
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063684798 610 VPVHSPDTLPFIYERGLLGIYHDWCEPFGTYPRSYDLLHADHLFSRLKNRCKQpASIVVEMDRLTRPGGWVVVRDKVEIL 689
Cdd:pfam03141 394 VPVDSPNTLPVIYDRGLIGIYHDWCEAFSTYPRTYDLLHADHLFSLYKKRCNL-VDILLEMDRILRPEGFVIIRDSVDVL 472
                         490       500       510
                  ....*....|....*....|....*....|....
gi 1063684798 690 EPLEEILRSLHWEIRMTYAQD----KEGMLCAQK 719
Cdd:pfam03141 473 DKVKKIAKAMRWEVRMTDTEDgphvPEKILIAQK 506
UbiE COG2226
Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG [Coenzyme transport and metabolism]; ...
329-444 3.65e-10

Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG [Coenzyme transport and metabolism]; Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG is part of the Pathway/BioSystem: Biotin biosynthesis


Pssm-ID: 441828 [Multi-domain]  Cd Length: 143  Bit Score: 58.47  E-value: 3.65e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063684798 329 EFIQEMVPDIEWGKNVRiVLDIGCSDSSFVAALLDKDVLTVSLGLKDDLVDLA-QVALERGFP-TFVSSLAsRRLPFPSG 406
Cdd:COG2226     9 DGREALLAALGLRPGAR-VLDLGCGTGRLALALAERGARVTGVDISPEMLELArERAAEAGLNvEFVVGDA-EDLPFPDG 86
                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 1063684798 407 VFDTIHCAaCGVHWHSHGGKLLLEMNRILRPNGYFILS 444
Cdd:COG2226    87 SFDLVISS-FVLHHLPDPERALAEIARVLKPGGRLVVV 123
AdoMet_MTases cd02440
S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; ...
347-444 2.19e-05

S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). There are at least five structurally distinct families of AdoMet-MTases, class I being the largest and most diverse. Within this class enzymes can be classified by different substrate specificities (small molecules, lipids, nucleic acids, etc.) and different target atoms for methylation (nitrogen, oxygen, carbon, sulfur, etc.).


Pssm-ID: 100107 [Multi-domain]  Cd Length: 107  Bit Score: 43.96  E-value: 2.19e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063684798 347 VLDIGCSD---SSFVAALLDKDVLTVSLGlkDDLVDLAQVALERGFP---TFVSSLASRRLPFPSGVFDTIHCAACGVHW 420
Cdd:cd02440     2 VLDLGCGTgalALALASGPGARVTGVDIS--PVALELARKAAAALLAdnvEVLKGDAEELPPEADESFDVIISDPPLHHL 79
                          90       100
                  ....*....|....*....|....
gi 1063684798 421 HSHGGKLLLEMNRILRPNGYFILS 444
Cdd:cd02440    80 VEDLARFLEEARRLLKPGGVLVLT 103
PRK08317 PRK08317
hypothetical protein; Provisional
347-444 2.73e-04

hypothetical protein; Provisional


Pssm-ID: 181382 [Multi-domain]  Cd Length: 241  Bit Score: 43.00  E-value: 2.73e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063684798 347 VLDIGCSDSSFVAALLD---KDVLTVSLGLKDDLVDLAQ--VALERGFPTFVSSLASRrLPFPSGVFDTihCAACGVHWH 421
Cdd:PRK08317   23 VLDVGCGPGNDARELARrvgPEGRVVGIDRSEAMLALAKerAAGLGPNVEFVRGDADG-LPFPDGSFDA--VRSDRVLQH 99
                          90       100
                  ....*....|....*....|....
gi 1063684798 422 SHG-GKLLLEMNRILRPNGYFILS 444
Cdd:PRK08317  100 LEDpARALAEIARVLRPGGRVVVL 123
 
Name Accession Description Interval E-value
Methyltransf_29 pfam03141
Putative S-adenosyl-L-methionine-dependent methyltransferase; This family is a putative ...
231-719 0e+00

Putative S-adenosyl-L-methionine-dependent methyltransferase; This family is a putative S-adenosyl-L-methionine (SAM)-dependent methyltransferase.


Pssm-ID: 335237 [Multi-domain]  Cd Length: 506  Bit Score: 793.05  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063684798 231 NYMPCIDNDGLIGRLQS---YRHRERSCPK--KPVMCLVPLPhDGYDPPVSWPESKSKILYKNVAHPKLAAYIKKHNWVN 305
Cdd:pfam03141   1 DYIPCLDNKRAIKFLLSrerMEHRERHCPPpeEKLNCLVPPP-DGYKTPIPWPKSRDKVWYANVPHTKLAEEKGGQNWVK 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063684798 306 ETGEYLSFPQNQTTFNGNVLQYLEFIQEMVPDIEWGKNVRIVLDIGCSDSSFVAALLDKDVLTVSLGLKDDLVDLAQVAL 385
Cdd:pfam03141  80 VEGDKFTFPGGGTQFPHGADQYIDFIAQMIPDIAWGGRVRTALDVGCGVASFGAYLLSRDVLTMSFAPKDVHEAQVQFAL 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063684798 386 ERGFPTFVSSLASRRLPFPSGVFDTIHCAACGVHWHSHGGKLLLEMNRILRPNGYFILSS-------NNDKIEDDEAMTA 458
Cdd:pfam03141 160 ERGIPAMLGVLGTKRLPYPSRSFDLAHCSRCRIPWTANDGILLLEVDRVLRPGGYFVLSGppvyartEEDLQEIWKEMED 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063684798 459 LTASICWNILAHKTEeasemgVRIYQKPESNDIYELRRK-KNPPLCEDNENPDAAWYVPMKTCIYEIPSAIEQHGAEWPE 537
Cdd:pfam03141 240 LTKSLCWKLVAKKGD------IAIWQKPLNNSCYNKREPgKKPPLCKDSDDPDAAWYVPMEACITPLPEVSHEVGGGWPE 313
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063684798 538 EWPKRLETYPEWLT-------SKEKAMEDTNHWNAMVNKSY-LTGLGIDWLHIRNVMDMTAIYGGFGASLVKQNVWVMNV 609
Cdd:pfam03141 314 PWPARLTAVPPRLSsgqiggvSPESFKADTELWKKRVNKYKrLLKLGIDWGKVRNVMDMNAGFGGFAAALIDLPVWVMNV 393
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063684798 610 VPVHSPDTLPFIYERGLLGIYHDWCEPFGTYPRSYDLLHADHLFSRLKNRCKQpASIVVEMDRLTRPGGWVVVRDKVEIL 689
Cdd:pfam03141 394 VPVDSPNTLPVIYDRGLIGIYHDWCEAFSTYPRTYDLLHADHLFSLYKKRCNL-VDILLEMDRILRPEGFVIIRDSVDVL 472
                         490       500       510
                  ....*....|....*....|....*....|....
gi 1063684798 690 EPLEEILRSLHWEIRMTYAQD----KEGMLCAQK 719
Cdd:pfam03141 473 DKVKKIAKAMRWEVRMTDTEDgphvPEKILIAQK 506
UbiE COG2226
Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG [Coenzyme transport and metabolism]; ...
329-444 3.65e-10

Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG [Coenzyme transport and metabolism]; Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG is part of the Pathway/BioSystem: Biotin biosynthesis


Pssm-ID: 441828 [Multi-domain]  Cd Length: 143  Bit Score: 58.47  E-value: 3.65e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063684798 329 EFIQEMVPDIEWGKNVRiVLDIGCSDSSFVAALLDKDVLTVSLGLKDDLVDLA-QVALERGFP-TFVSSLAsRRLPFPSG 406
Cdd:COG2226     9 DGREALLAALGLRPGAR-VLDLGCGTGRLALALAERGARVTGVDISPEMLELArERAAEAGLNvEFVVGDA-EDLPFPDG 86
                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 1063684798 407 VFDTIHCAaCGVHWHSHGGKLLLEMNRILRPNGYFILS 444
Cdd:COG2226    87 SFDLVISS-FVLHHLPDPERALAEIARVLKPGGRLVVV 123
Methyltransf_11 pfam08241
Methyltransferase domain; Members of this family are SAM dependent methyltransferases.
348-443 6.84e-10

Methyltransferase domain; Members of this family are SAM dependent methyltransferases.


Pssm-ID: 462406 [Multi-domain]  Cd Length: 94  Bit Score: 56.52  E-value: 6.84e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063684798 348 LDIGCSDSSFVAALLDKDVLTVSLGLKDDLVDLAQVALERGFPTFVSSLAsRRLPFPSGVFDTIHCAACgVHWHSHGGKL 427
Cdd:pfam08241   1 LDVGCGTGLLTELLARLGARVTGVDISPEMLELAREKAPREGLTFVVGDA-EDLPFPDNSFDLVLSSEV-LHHVEDPERA 78
                          90
                  ....*....|....*.
gi 1063684798 428 LLEMNRILRPNGYFIL 443
Cdd:pfam08241  79 LREIARVLKPGGILII 94
Methyltransf_25 pfam13649
Methyltransferase domain; This family appears to be a methyltransferase domain.
347-439 1.54e-07

Methyltransferase domain; This family appears to be a methyltransferase domain.


Pssm-ID: 463945 [Multi-domain]  Cd Length: 96  Bit Score: 49.87  E-value: 1.54e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063684798 347 VLDIGCSDSSFVAALLDKDVLTVslglkdDLVDLAQVALER--------GFP-TFVssLAS-RRLPFPSGVFDTIHCAAC 416
Cdd:pfam13649   1 VLDLGCGTGRLTLALARRGGARV------TGVDLSPEMLERareraaeaGLNvEFV--QGDaEDLPFPDGSFDLVVSSGV 72
                          90       100
                  ....*....|....*....|....
gi 1063684798 417 GVH-WHSHGGKLLLEMNRILRPNG 439
Cdd:pfam13649  73 LHHlPDPDLEAALREIARVLKPGG 96
SmtA COG0500
SAM-dependent methyltransferase [Secondary metabolites biosynthesis, transport and catabolism, ...
347-481 4.13e-06

SAM-dependent methyltransferase [Secondary metabolites biosynthesis, transport and catabolism, General function prediction only];


Pssm-ID: 440266 [Multi-domain]  Cd Length: 199  Bit Score: 47.99  E-value: 4.13e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063684798 347 VLDIGCSDSSFVAALLDKDVLTVsLGlkddlVDLAQVALER----------GFPTFVSSLASRRLPFPSGVFDTIHCAAC 416
Cdd:COG0500    30 VLDLGCGTGRNLLALAARFGGRV-IG-----IDLSPEAIALararaakaglGNVEFLVADLAELDPLPAESFDLVVAFGV 103
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1063684798 417 gVHWHSHG--GKLLLEMNRILRPNGYFILSSNNDKIEDDEAMTALTASICWNI-LAHKTEEASEMGVR 481
Cdd:COG0500   104 -LHHLPPEerEALLRELARALKPGGVLLLSASDAAAALSLARLLLLATASLLElLLLLRLLALELYLR 170
UbiG COG2227
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme transport and ...
347-447 5.08e-06

2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme transport and metabolism]; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase is part of the Pathway/BioSystem: Ubiquinone biosynthesis


Pssm-ID: 441829 [Multi-domain]  Cd Length: 126  Bit Score: 46.16  E-value: 5.08e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063684798 347 VLDIGCSDSSFVAALLDKDVLTVSLGLKDDLVDLAQVALERGFPTFVSSLAsRRLPFPSGVFDTIHCaaCGVHWH-SHGG 425
Cdd:COG2227    28 VLDVGCGTGRLALALARRGADVTGVDISPEALEIARERAAELNVDFVQGDL-EDLPLEDGSFDLVIC--SEVLEHlPDPA 104
                          90       100
                  ....*....|....*....|..
gi 1063684798 426 KLLLEMNRILRPNGYFILSSNN 447
Cdd:COG2227   105 ALLRELARLLKPGGLLLLSTPN 126
AdoMet_MTases cd02440
S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; ...
347-444 2.19e-05

S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). There are at least five structurally distinct families of AdoMet-MTases, class I being the largest and most diverse. Within this class enzymes can be classified by different substrate specificities (small molecules, lipids, nucleic acids, etc.) and different target atoms for methylation (nitrogen, oxygen, carbon, sulfur, etc.).


Pssm-ID: 100107 [Multi-domain]  Cd Length: 107  Bit Score: 43.96  E-value: 2.19e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063684798 347 VLDIGCSD---SSFVAALLDKDVLTVSLGlkDDLVDLAQVALERGFP---TFVSSLASRRLPFPSGVFDTIHCAACGVHW 420
Cdd:cd02440     2 VLDLGCGTgalALALASGPGARVTGVDIS--PVALELARKAAAALLAdnvEVLKGDAEELPPEADESFDVIISDPPLHHL 79
                          90       100
                  ....*....|....*....|....
gi 1063684798 421 HSHGGKLLLEMNRILRPNGYFILS 444
Cdd:cd02440    80 VEDLARFLEEARRLLKPGGVLVLT 103
PRK08317 PRK08317
hypothetical protein; Provisional
347-444 2.73e-04

hypothetical protein; Provisional


Pssm-ID: 181382 [Multi-domain]  Cd Length: 241  Bit Score: 43.00  E-value: 2.73e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063684798 347 VLDIGCSDSSFVAALLD---KDVLTVSLGLKDDLVDLAQ--VALERGFPTFVSSLASRrLPFPSGVFDTihCAACGVHWH 421
Cdd:PRK08317   23 VLDVGCGPGNDARELARrvgPEGRVVGIDRSEAMLALAKerAAGLGPNVEFVRGDADG-LPFPDGSFDA--VRSDRVLQH 99
                          90       100
                  ....*....|....*....|....
gi 1063684798 422 SHG-GKLLLEMNRILRPNGYFILS 444
Cdd:PRK08317  100 LEDpARALAEIARVLRPGGRVVVL 123
Tam COG4106
Trans-aconitate methyltransferase [Energy production and conversion];
347-444 4.88e-04

Trans-aconitate methyltransferase [Energy production and conversion];


Pssm-ID: 443282 [Multi-domain]  Cd Length: 100  Bit Score: 39.81  E-value: 4.88e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063684798 347 VLDIGCSDSSFVAALLDK----DVLtvslglkddLVDLAQVALERgfptfvsslASRRLP---F---------PSGVFDT 410
Cdd:COG4106     5 VLDLGCGTGRLTALLAERfpgaRVT---------GVDLSPEMLAR---------ARARLPnvrFvvadlrdldPPEPFDL 66
                          90       100       110
                  ....*....|....*....|....*....|....
gi 1063684798 411 IHCAACgVHWHSHGGKLLLEMNRILRPNGYFILS 444
Cdd:COG4106    67 VVSNAA-LHWLPDHAALLARLAAALAPGGVLAVQ 99
Methyltransf_23 pfam13489
Methyltransferase domain; This family appears to be a methyltransferase domain.
326-444 1.02e-03

Methyltransferase domain; This family appears to be a methyltransferase domain.


Pssm-ID: 404385 [Multi-domain]  Cd Length: 162  Bit Score: 40.49  E-value: 1.02e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063684798 326 QYLEFIQEMVPDIEWGKNVrivLDIGCSDSSFVAALLDKdvltvslGLKDDLVDLAQVALERGFPTFVSSLASRRLP-FP 404
Cdd:pfam13489   8 LLADLLLRLLPKLPSPGRV---LDFGCGTGIFLRLLRAQ-------GFSVTGVDPSPIAIERALLNVRFDQFDEQEAaVP 77
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|
gi 1063684798 405 SGVFDTIHCAACGVHWHSHGgKLLLEMNRILRPNGYFILS 444
Cdd:pfam13489  78 AGKFDVIVAREVLEHVPDPP-ALLRQIAALLKPGGLLLLS 116
COG4976 COG4976
Predicted methyltransferase, contains TPR repeat [General function prediction only];
347-462 8.05e-03

Predicted methyltransferase, contains TPR repeat [General function prediction only];


Pssm-ID: 444001 [Multi-domain]  Cd Length: 181  Bit Score: 38.06  E-value: 8.05e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063684798 347 VLDIGCSDSSFVAALLDKdVLTVsLGlkddlVDLAQVALER------GFPTFVSSLasRRLPFPSGVFDTIhcAACGVHW 420
Cdd:COG4976    50 VLDLGCGTGLLGEALRPR-GYRL-TG-----VDLSEEMLAKarekgvYDRLLVADL--ADLAEPDGRFDLI--VAADVLT 118
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 1063684798 421 HSHGGKLLL-EMNRILRPNGYFILSSNNdkiEDDEAMTALTAS 462
Cdd:COG4976   119 YLGDLAAVFaGVARALKPGGLFIFSVED---ADGSGRYAHSLD 158
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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