jasmonate-zim-domain protein 1 [Arabidopsis thaliana]
Protein Classification
protein TIFY( domain architecture ID 10533189)
protein TIFY may act as repressor of jasmonate responses
List of domain hits
| Name | Accession | Description | Interval | E-value | ||
| tify | pfam06200 | tify domain; This short possible domain is found in a variety of plant transcription factors ... |
122-154 | 7.67e-14 | ||
tify domain; This short possible domain is found in a variety of plant transcription factors that contain GATA domains as well as other motifs. Although previously known as the Zim domain this is now called the tify domain after its most conserved amino acids. TIFY proteins can be further classified into two groups depending on the presence (group I) or absence (group II) of a C2C2-GATA domain. Functional annotation of these proteins is still poor, but several screens revealed a link between TIFY proteins of group II and jasmonic acid-related stress response. : Pssm-ID: 461847 Cd Length: 33 Bit Score: 63.55 E-value: 7.67e-14
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| Jas_motif | pfam09425 | Jas motif; This entry represents the Jas motif. The Jas motif can bind to jasmonate as a ... |
202-226 | 1.18e-11 | ||
Jas motif; This entry represents the Jas motif. The Jas motif can bind to jasmonate as a partially unwound helix. It can also bind to Myc proteins which are key mediators of josmonate signalling in plants. : Pssm-ID: 430603 Cd Length: 25 Bit Score: 57.47 E-value: 1.18e-11
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| Name | Accession | Description | Interval | E-value | ||
| tify | pfam06200 | tify domain; This short possible domain is found in a variety of plant transcription factors ... |
122-154 | 7.67e-14 | ||
tify domain; This short possible domain is found in a variety of plant transcription factors that contain GATA domains as well as other motifs. Although previously known as the Zim domain this is now called the tify domain after its most conserved amino acids. TIFY proteins can be further classified into two groups depending on the presence (group I) or absence (group II) of a C2C2-GATA domain. Functional annotation of these proteins is still poor, but several screens revealed a link between TIFY proteins of group II and jasmonic acid-related stress response. Pssm-ID: 461847 Cd Length: 33 Bit Score: 63.55 E-value: 7.67e-14
|
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| Jas_motif | pfam09425 | Jas motif; This entry represents the Jas motif. The Jas motif can bind to jasmonate as a ... |
202-226 | 1.18e-11 | ||
Jas motif; This entry represents the Jas motif. The Jas motif can bind to jasmonate as a partially unwound helix. It can also bind to Myc proteins which are key mediators of josmonate signalling in plants. Pssm-ID: 430603 Cd Length: 25 Bit Score: 57.47 E-value: 1.18e-11
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| TIFY | smart00979 | This short possible domain is found in a variety of plant transcription factors that contain ... |
120-155 | 1.32e-11 | ||
This short possible domain is found in a variety of plant transcription factors that contain GATA domains as well as other motifs; Although previously known as the Zim domain this is now called the tify domain after its most conserved amino acids. TIFY proteins can be further classified into two groups depending on the presence (group I) or absence (group II) of a C2C2-GATA domain. Functional annotation of these proteins is still poor, but several screens revealed a link between TIFY proteins of group II and jasmonic acid-related stress response. Pssm-ID: 198047 Cd Length: 36 Bit Score: 57.66 E-value: 1.32e-11
|
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| Name | Accession | Description | Interval | E-value | ||
| tify | pfam06200 | tify domain; This short possible domain is found in a variety of plant transcription factors ... |
122-154 | 7.67e-14 | ||
tify domain; This short possible domain is found in a variety of plant transcription factors that contain GATA domains as well as other motifs. Although previously known as the Zim domain this is now called the tify domain after its most conserved amino acids. TIFY proteins can be further classified into two groups depending on the presence (group I) or absence (group II) of a C2C2-GATA domain. Functional annotation of these proteins is still poor, but several screens revealed a link between TIFY proteins of group II and jasmonic acid-related stress response. Pssm-ID: 461847 Cd Length: 33 Bit Score: 63.55 E-value: 7.67e-14
|
||||||
| Jas_motif | pfam09425 | Jas motif; This entry represents the Jas motif. The Jas motif can bind to jasmonate as a ... |
202-226 | 1.18e-11 | ||
Jas motif; This entry represents the Jas motif. The Jas motif can bind to jasmonate as a partially unwound helix. It can also bind to Myc proteins which are key mediators of josmonate signalling in plants. Pssm-ID: 430603 Cd Length: 25 Bit Score: 57.47 E-value: 1.18e-11
|
||||||
| TIFY | smart00979 | This short possible domain is found in a variety of plant transcription factors that contain ... |
120-155 | 1.32e-11 | ||
This short possible domain is found in a variety of plant transcription factors that contain GATA domains as well as other motifs; Although previously known as the Zim domain this is now called the tify domain after its most conserved amino acids. TIFY proteins can be further classified into two groups depending on the presence (group I) or absence (group II) of a C2C2-GATA domain. Functional annotation of these proteins is still poor, but several screens revealed a link between TIFY proteins of group II and jasmonic acid-related stress response. Pssm-ID: 198047 Cd Length: 36 Bit Score: 57.66 E-value: 1.32e-11
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| Blast search parameters | ||||
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