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Conserved domains on  [gi|985567532|ref|NP_001306594|]
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transmembrane protein 51 isoform 2 [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
TMEM51 super family cl21188
Transmembrane protein 51; This family of proteins is found in eukaryotes. Proteins in this ...
 7-114 2.52e-46

Transmembrane protein 51; This family of proteins is found in eukaryotes. Proteins in this family are typically between 233 and 253 amino acids in length.


The actual alignment was detected with superfamily member pfam15345:

Pssm-ID: 464663  Cd Length: 237  Bit Score: 149.87  E-value: 2.52e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 985567532    7 ANGSHYALTAIGLGMLVLGVIMAMWNLVPGFSAAEKPTAQGSNKTE---VGGGILKSKTFSVAYVLVGAGVMLLLLSICL 83
Cdd:pfam15345   1 NSGSHYALTALGVGMLALGIVMIVWNVVPGFGAADKPTASGGNSSKpggDGGGILKSKTSSVAYVLVGAGVALLLLSICL 80

                          90       100       110
                  ....*....|....*....|....*....|.
gi 985567532   84 SIRDKRKQRQGEDLAHVQHPTGAGPHAQEED 114
Cdd:pfam15345  81 GVRNKRRRRQREEEGARAGPHLQEPSRSQEE 111
 
Name Accession Description Interval E-value
TMEM51 pfam15345
Transmembrane protein 51; This family of proteins is found in eukaryotes. Proteins in this ...
 7-114 2.52e-46

Transmembrane protein 51; This family of proteins is found in eukaryotes. Proteins in this family are typically between 233 and 253 amino acids in length.


Pssm-ID: 464663  Cd Length: 237  Bit Score: 149.87  E-value: 2.52e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 985567532    7 ANGSHYALTAIGLGMLVLGVIMAMWNLVPGFSAAEKPTAQGSNKTE---VGGGILKSKTFSVAYVLVGAGVMLLLLSICL 83
Cdd:pfam15345   1 NSGSHYALTALGVGMLALGIVMIVWNVVPGFGAADKPTASGGNSSKpggDGGGILKSKTSSVAYVLVGAGVALLLLSICL 80

                          90       100       110
                  ....*....|....*....|....*....|.
gi 985567532   84 SIRDKRKQRQGEDLAHVQHPTGAGPHAQEED 114
Cdd:pfam15345  81 GVRNKRRRRQREEEGARAGPHLQEPSRSQEE 111
 
Name Accession Description Interval E-value
TMEM51 pfam15345
Transmembrane protein 51; This family of proteins is found in eukaryotes. Proteins in this ...
 7-114 2.52e-46

Transmembrane protein 51; This family of proteins is found in eukaryotes. Proteins in this family are typically between 233 and 253 amino acids in length.


Pssm-ID: 464663  Cd Length: 237  Bit Score: 149.87  E-value: 2.52e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 985567532    7 ANGSHYALTAIGLGMLVLGVIMAMWNLVPGFSAAEKPTAQGSNKTE---VGGGILKSKTFSVAYVLVGAGVMLLLLSICL 83
Cdd:pfam15345   1 NSGSHYALTALGVGMLALGIVMIVWNVVPGFGAADKPTASGGNSSKpggDGGGILKSKTSSVAYVLVGAGVALLLLSICL 80

                          90       100       110
                  ....*....|....*....|....*....|.
gi 985567532   84 SIRDKRKQRQGEDLAHVQHPTGAGPHAQEED 114
Cdd:pfam15345  81 GVRNKRRRRQREEEGARAGPHLQEPSRSQEE 111
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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