AP-3 complex subunit sigma-1 isoform 5 [Homo sapiens]
AP-3 complex subunit sigma( domain architecture ID 13000718)
AP-3 complex subunit sigma is part of the AP-3 complex that is associated with the Golgi region as well as more peripheral structures
List of domain hits
Name | Accession | Description | Interval | E-value | |||
AP3_sigma | cd14834 | AP-3 complex subunit sigma; AP-3 complex sigma subunit is part of the heterotetrameric adaptor ... |
1-146 | 8.25e-111 | |||
AP-3 complex subunit sigma; AP-3 complex sigma subunit is part of the heterotetrameric adaptor protein (AP)-1 complex which consists of one large delta-, one beta-, one mu-, and one sigma-subunit. AP complexes link the cytosolic domains of the cargo proteins to the protein coat that induces vesicle budding in the donor compartment during vesicle transport. AP-3 binds the coat protein clathrin and the phospholipid PI(3)P and it is localized in the endosome. The sigma subunit is comprised of a single longin domain and plays a role in binding dileucine-based sorting signals. : Pssm-ID: 341438 Cd Length: 146 Bit Score: 311.08 E-value: 8.25e-111
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Name | Accession | Description | Interval | E-value | |||
AP3_sigma | cd14834 | AP-3 complex subunit sigma; AP-3 complex sigma subunit is part of the heterotetrameric adaptor ... |
1-146 | 8.25e-111 | |||
AP-3 complex subunit sigma; AP-3 complex sigma subunit is part of the heterotetrameric adaptor protein (AP)-1 complex which consists of one large delta-, one beta-, one mu-, and one sigma-subunit. AP complexes link the cytosolic domains of the cargo proteins to the protein coat that induces vesicle budding in the donor compartment during vesicle transport. AP-3 binds the coat protein clathrin and the phospholipid PI(3)P and it is localized in the endosome. The sigma subunit is comprised of a single longin domain and plays a role in binding dileucine-based sorting signals. Pssm-ID: 341438 Cd Length: 146 Bit Score: 311.08 E-value: 8.25e-111
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APS2 | COG5030 | Clathrin adaptor complex, small subunit [Intracellular trafficking and secretion]; |
1-148 | 5.51e-59 | |||
Clathrin adaptor complex, small subunit [Intracellular trafficking and secretion]; Pssm-ID: 227363 Cd Length: 152 Bit Score: 180.30 E-value: 5.51e-59
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Clat_adaptor_s | pfam01217 | Clathrin adaptor complex small chain; |
1-148 | 1.48e-56 | |||
Clathrin adaptor complex small chain; Pssm-ID: 460115 Cd Length: 142 Bit Score: 173.70 E-value: 1.48e-56
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Name | Accession | Description | Interval | E-value | |||
AP3_sigma | cd14834 | AP-3 complex subunit sigma; AP-3 complex sigma subunit is part of the heterotetrameric adaptor ... |
1-146 | 8.25e-111 | |||
AP-3 complex subunit sigma; AP-3 complex sigma subunit is part of the heterotetrameric adaptor protein (AP)-1 complex which consists of one large delta-, one beta-, one mu-, and one sigma-subunit. AP complexes link the cytosolic domains of the cargo proteins to the protein coat that induces vesicle budding in the donor compartment during vesicle transport. AP-3 binds the coat protein clathrin and the phospholipid PI(3)P and it is localized in the endosome. The sigma subunit is comprised of a single longin domain and plays a role in binding dileucine-based sorting signals. Pssm-ID: 341438 Cd Length: 146 Bit Score: 311.08 E-value: 8.25e-111
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AP_sigma | cd14827 | AP complex subunit sigma; AP complex sigma subunits are part of the heterotetrameric adaptor ... |
3-146 | 7.44e-66 | |||
AP complex subunit sigma; AP complex sigma subunits are part of the heterotetrameric adaptor protein (AP) complex which consists of one large subunit (alpha-, gamma-, delta- or epsilon), one beta-, one mu-, and one sigma-subunit. In general, AP complexes link the cytosolic domains of the cargo proteins to the protein coat that induces vesicle budding in the donor compartment during vesicle transport. In most cases the coat protein is clathrin (AP1 and AP2 complex), but some of the other members of the AP complex family are associated with nonclathrin coats. The sigma subunit is comprised of a single longin domain and plays a role in binding dileucine-based sorting signals. Pssm-ID: 341431 Cd Length: 138 Bit Score: 197.28 E-value: 7.44e-66
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APS2 | COG5030 | Clathrin adaptor complex, small subunit [Intracellular trafficking and secretion]; |
1-148 | 5.51e-59 | |||
Clathrin adaptor complex, small subunit [Intracellular trafficking and secretion]; Pssm-ID: 227363 Cd Length: 152 Bit Score: 180.30 E-value: 5.51e-59
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Clat_adaptor_s | pfam01217 | Clathrin adaptor complex small chain; |
1-148 | 1.48e-56 | |||
Clathrin adaptor complex small chain; Pssm-ID: 460115 Cd Length: 142 Bit Score: 173.70 E-value: 1.48e-56
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AP2_sigma | cd14833 | AP-2 complex subunit sigma; AP-2 complex sigma subunit is part of the heterotetrameric adaptor ... |
1-147 | 1.52e-50 | |||
AP-2 complex subunit sigma; AP-2 complex sigma subunit is part of the heterotetrameric adaptor protein (AP)-2 complex which consists of one large alpha-, one beta-, one mu-, and one sigma-subunit. AP complexes link the cytosolic domains of the cargo proteins to the protein coat that induces vesicle budding in the donor compartment during vesicle transport. In the case of AP-2 the coat protein is clathrin. AP-2 binds the phospholipid PI(4,5)P2 which is important for its localisation to the plasma membrane. The sigma subunit is comprised of a single longin domain and plays a role in binding dileucine-based sorting signals. Pssm-ID: 341437 Cd Length: 141 Bit Score: 158.50 E-value: 1.52e-50
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AP1_sigma | cd14831 | AP-1 complex subunit sigma; AP-1 complex sigma subunit is part of the heterotetrameric adaptor ... |
5-151 | 8.62e-48 | |||
AP-1 complex subunit sigma; AP-1 complex sigma subunit is part of the heterotetrameric adaptor protein (AP)-1 complex which consists of one large gamma-, one beta-, one mu-, and one sigma-subunit. AP complexes link the cytosolic domains of the cargo proteins to the protein coat that induces vesicle budding in the donor compartment during vesicle transport. In the case of AP-1 the coat protein is clathrin. AP-1 binds the phospholipid PI(4)P which plays a role in its localisation to the trans-Golgi network (TGN)/endosome. The sigma subunit is comprised of a single longin domain and plays a role in binding dileucine-based sorting signals. Pssm-ID: 341435 Cd Length: 143 Bit Score: 151.56 E-value: 8.62e-48
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AP4_sigma | cd14832 | AP-4 complex subunit sigma; AP-4 complex sigma subunit is part of the heterotetrameric adaptor ... |
3-146 | 3.64e-40 | |||
AP-4 complex subunit sigma; AP-4 complex sigma subunit is part of the heterotetrameric adaptor protein (AP)-1 complex which consists of one large epsilon-, one beta-, one mu-, and one sigma-subunit. AP complexes link the cytosolic domains of the cargo proteins to the protein coat that induces vesicle budding in the donor compartment during vesicle transport. AP-4 does not bind the coat protein clathrin, it is associated with nonclathrin coats. Its phospholipid binding partner is unknown and it is localized in the trans-Golgi network (TGN). The sigma subunit is comprised of a single longin domain and plays a role in binding dileucine-based sorting signals. Pssm-ID: 341436 Cd Length: 138 Bit Score: 131.97 E-value: 3.64e-40
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AP_longin-like | cd14823 | Longin-like domains of AP complex subunits; AP complex sigma subunits are part of the ... |
3-139 | 2.62e-15 | |||
Longin-like domains of AP complex subunits; AP complex sigma subunits are part of the heterotetrameric adaptor protein (AP) complex which consists of one large subunit (alpha-, gamma-, delta- or epsilon), one beta-, one mu-, and one sigma-subunit. In general, AP complexes link the cytosolic domains of the cargo proteins to the protein coat that induces vesicle budding in the donor compartment during vesicle transport. In most cases the coat protein is clathrin (AP1 and AP2 complex), but some of the other members of the AP complex family are associated with nonclathrin coats. The sigma subunit is comprised of a single longin domain and plays a role in binding dileucine-based sorting signals. Pssm-ID: 341427 Cd Length: 131 Bit Score: 68.31 E-value: 2.62e-15
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Zeta-COP | cd14829 | zeta subunit of the F-COPI complex; Zeta subunit of the heterotetrameric F-COPI complex, which ... |
3-138 | 2.35e-04 | |||
zeta subunit of the F-COPI complex; Zeta subunit of the heterotetrameric F-COPI complex, which consists of one beta-, one gamma-, one delta-, and one zeta subunit, where beta- and gamma- subunits are related to the large adaptor protein (AP) complex subunits, and delta- and zeta- subunits are related to the medium and small AP subunits, respectively. F-COPI forms a coatomer together with the B-COPI subcomplex, which assembles with a small GTPase, ADP-ribosylation factor 1 (ARF1), playing an important role in the formation of COPI complex-coated vesicles. COPI complex-coated vesicles function in the early secretory pathway mediating the retrograde transport from the Golgi to the ER, and intra-Golgi transport. Pssm-ID: 341433 Cd Length: 132 Bit Score: 39.07 E-value: 2.35e-04
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Blast search parameters | ||||
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