|
Name |
Accession |
Description |
Interval |
E-value |
| Filament |
pfam00038 |
Intermediate filament protein; |
7-313 |
5.98e-23 |
|
Intermediate filament protein;
Pssm-ID: 459643 [Multi-domain] Cd Length: 313 Bit Score: 101.54 E-value: 5.98e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 7 EESFQMWELNRRLEAYLTRVKTLEEQNQLLSAELGGLRAQSGDTSWRARA--DDELASLRILVDQRWREKLEAEVQRDNL 84
Cdd:pfam00038 1 NEKEQLQELNDRLASYIDKVRFLEQQNKLLETKISELRQKKGAEPSRLYSlyEKEIEDLRRQLDTLTVERARLQLELDNL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 85 AEELESVAGRCQQVRLARERTVQEAACSRRALEAEKNARGWLSTQAAELERELEALRAAHEEERAHLNAQAACAPRRPPA 164
Cdd:pfam00038 81 RLAAEDFRQKYEDELNLRTSAENDLVGLRKDLDEATLARVDLEAKIESLKEELAFLKKNHEEEVRELQAQVSDTQVNVEM 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 165 PPHGSP--------VRApEVEDLARR----LGEVWRGAVRDYQERVAHMESSLGQARERLSQAVRGARECRLEVQQLQAD 232
Cdd:pfam00038 161 DAARKLdltsalaeIRA-QYEEIAAKnreeAEEWYQSKLEELQQAAARNGDALRSAKEEITELRRTIQSLEIELQSLKKQ 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 233 RDSLQERREALEQRLEGrwqdrlqATDKFQLAVEALEQEKQGLQSQIAQILEGGQQLAHLKMSLSLEVATYRTLLEAENS 312
Cdd:pfam00038 240 KASLERQLAETEERYEL-------QLADYQELISELEAELQETRQEMARQLREYQELLNVKLALDIEIATYRKLLEGEEC 312
|
.
gi 815891005 313 R 313
Cdd:pfam00038 313 R 313
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
25-315 |
2.59e-10 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 65.73 E-value: 2.59e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 25 RVKTLEEQNQLLSAELGGLRaqsgdtswRARADDELASLRILVDQRWREKLEAEVQRDNLAEELESVAGRCQQVRLARER 104
Cdd:COG1196 214 RYRELKEELKELEAELLLLK--------LRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEE 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 105 TVQEAACSRRALEAEKNARGWLSTQAAELERELEALRAAHEEERAHLNAQAACAPRRPPAPPhgspVRAPEVEDLARRLG 184
Cdd:COG1196 286 AQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELE----EAEEELEEAEAELA 361
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 185 EVwRGAVRDYQERVAHMESSLGQARERLSQAVRGARECRLEVQQLQADRDSLQERREALEQRLEGRWQDRLQATDKFQLA 264
Cdd:COG1196 362 EA-EEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEE 440
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 815891005 265 VEALEQEKQGLQSQIAQILEGGQQLAHLKMSLSLEVATYRTLLEAENSRLQ 315
Cdd:COG1196 441 EEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAA 491
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
496-958 |
2.06e-09 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 63.24 E-value: 2.06e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 496 EKEADIEVKVENSSAQKTQESGLDTEETQDSQGPLQKETLKALGEEplmsLKIQNYETAGKENCNSSTEGHLGTLEGPEK 575
Cdd:PTZ00121 1429 EKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADE----AKKKAEEAKKADEAKKKAEEAKKKADEAKK 1504
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 576 EKQIPLKSLEEKNVESEKTLEngvpvlsELLGKEDTRTEDQelmSPKGTLKRFSSLGKESQEVVRPSKEGNLESwtAFKE 655
Cdd:PTZ00121 1505 AAEAKKKADEAKKAEEAKKAD-------EAKKAEEAKKADE---AKKAEEKKKADELKKAEELKKAEEKKKAEE--AKKA 1572
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 656 ESQHPLGFPGAEDqmLERLVEKEDQSFPRSPEEEDQEACRPLQKENQEPLGYEeaegQILERLIEKESQESLRSPEEEDQ 735
Cdd:PTZ00121 1573 EEDKNMALRKAEE--AKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAE----ELKKAEEEKKKVEQLKKKEAEEK 1646
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 736 EAGRSLQKENQEPLGYEEAEGQILERliEKESQESLRSAEEEDQEACRSLQKENQEPLGYEE-----------AEDQILE 804
Cdd:PTZ00121 1647 KKAEELKKAEEENKIKAAEEAKKAEE--DKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEElkkkeaeekkkAEELKKA 1724
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 805 RLIEKESQESLRSPEEEDQEAGRSLQKENQE--PLGYEEAEDQMLERLIEKESQESLKS--PEENQRIGKPLERE----- 875
Cdd:PTZ00121 1725 EEENKIKAEEAKKEAEEDKKKAEEAKKDEEEkkKIAHLKKEEEKKAEEIRKEKEAVIEEelDEEDEKRRMEVDKKikdif 1804
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 876 ---------NQKSLRYLEENQETFVPlESRNQRPLRSLEVEEEEQRIVKPLEKVSQDSLGSLAEENVQPLRYLEEDNciN 946
Cdd:PTZ00121 1805 dnfaniiegGKEGNLVINDSKEMEDS-AIKEVADSKNMQLEEADAFEKHKFNKNNENGEDGNKEADFNKEKDLKEDD--E 1881
|
490
....*....|..
gi 815891005 947 KSLLEDKTHKSL 958
Cdd:PTZ00121 1882 EEIEEADEIEKI 1893
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
14-273 |
2.40e-08 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 59.30 E-value: 2.40e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 14 ELNRRLEAYLTRVKTLEEQNQLLSAELGGLRAQSgdtswraraddELASLRILVDQRWREKLEAEVQRdnLAEELESVAG 93
Cdd:TIGR02168 285 ELQKELYALANEISRLEQQKQILRERLANLERQL-----------EELEAQLEELESKLDELAEELAE--LEEKLEELKE 351
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 94 RCQQVRLARERTVQEAACSRRALEAEKNARGWLSTQAAELERELEALRAAHEEERAHLNA-QAACAPRRPPAPPHGSPVR 172
Cdd:TIGR02168 352 ELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERlEDRRERLQQEIEELLKKLE 431
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 173 APEVEDLARRLGEVWRGAVrDYQERVAHMESSLGQARERLSQAVRGARECRLEVQQLQADRDSLQERREALEQRLEGR-- 250
Cdd:TIGR02168 432 EAELKELQAELEELEEELE-ELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVka 510
|
250 260
....*....|....*....|....
gi 815891005 251 -WQDRLQATDKFQLAVEALEQEKQ 273
Cdd:TIGR02168 511 lLKNQSGLSGILGVLSELISVDEG 534
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
666-919 |
4.38e-05 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 48.58 E-value: 4.38e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 666 AEDQMLERLVEKEDQSFPRSPEEEDQEACRPLQKENQEPLGYEEAEGQIL-----ERLIEKESQESLRSPEEEDQeagRS 740
Cdd:pfam17380 285 SERQQQEKFEKMEQERLRQEKEEKAREVERRRKLEEAEKARQAEMDRQAAiyaeqERMAMERERELERIRQEERK---RE 361
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 741 LQKENQEPLGYEEAEGQILERLIEKESQESLRSAEE-EDQEACRSLQKENQEPLGYEEAEDQILERLIEKESQESLRSPE 819
Cdd:pfam17380 362 LERIRQEEIAMEISRMRELERLQMERQQKNERVRQElEAARKVKILEEERQRKIQQQKVEMEQIRAEQEEARQREVRRLE 441
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 820 EEDQEAGRSLQKENQEP------LGYEEAEDQMLERLIEKESQESLKSPEENQRIgkpLEREnqkslryLEENQETFvpL 893
Cdd:pfam17380 442 EERAREMERVRLEEQERqqqverLRQQEEERKRKKLELEKEKRDRKRAEEQRRKI---LEKE-------LEERKQAM--I 509
|
250 260
....*....|....*....|....*.
gi 815891005 894 ESRNQRPLRSLEVEEEEQRIVKPLEK 919
Cdd:pfam17380 510 EEERKRKLLEKEMEERQKAIYEEERR 535
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
708-1255 |
6.12e-04 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 44.96 E-value: 6.12e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 708 EEAEGQILERLIEKESQESLRSPEEEDQEAGRSLQKENQEplgyEEAEGQILERLIEKESQESLRSAEEEDQEACRSLQK 787
Cdd:pfam02463 180 EETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKL----ELEEEYLLYLDYLKLNEERIDLLQELLRDEQEEIES 255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 788 ENQEPLGYEEAEDQILERLIEKESQESLRspEEEDQEAGRSLQKENQEPLGYEEAEDQMLERLIEKESQESLKSPEENQR 867
Cdd:pfam02463 256 SKQEIEKEEEKLAQVLKENKEEEKEKKLQ--EEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEKKKAEKELKKE 333
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 868 IGKPLERENQKSLryLEENQETFVPLESRNQRPLRSLEVEEEEQRIVKPLEKVSQDSLGSLAEENVQP-----------L 936
Cdd:pfam02463 334 KEEIEELEKELKE--LEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELkseeekeaqllL 411
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 937 RYLEEDNCINKSLLEDKTHKSLGSLEDRNGDSIIIPQESETQVSLRPPEEEDQRIVNHLEKESQEFSRSSEEEEQVMERS 1016
Cdd:pfam02463 412 ELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQLELLLS 491
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 1017 LEGENHESLSSVEKEDQMVESQLEKESQDSGKSLEDESQETFGPLEKENAESLRSLAGQDQEEqKLEQETQQTLRAVGNE 1096
Cdd:pfam02463 492 RQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENYKVAISTAVIVEVS-ATADEVEERQKLVRAL 570
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 1097 QMAVSPPEKVDPELPKPLGNDQEIARslgKENQESLVSLKEKGIETVKSLETEIIEPLETAEEDLERRKSIDTQEPLWST 1176
Cdd:pfam02463 571 TELPLGARKLRLLIPKLKLPLKSIAV---LEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTELTKLKESAKAKESG 647
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 815891005 1177 EVARETVEPPEDEPPGSLGSVDENRETLTSLEKESQELSSLGKWNVETRVEDSQQCLQVEEGLQEEQHQESLREVKQEL 1255
Cdd:pfam02463 648 LRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLEAEELLADR 726
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
708-1109 |
1.17e-03 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 44.16 E-value: 1.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 708 EEAEGQILERLIEKESQ--ESLRSPEEEDQEAGRSLQKENQEPLGYEEAEGQILERLIEKESQESLRSAEEEDQEACRSL 785
Cdd:COG1196 357 EAELAEAEEALLEAEAElaEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEE 436
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 786 QKENQEPLgyEEAEDQILERLIEKESQESLRSPEEEDQEAGRSLQKENQEPLGYEEAEDQMLERLIEKESQESLKSPEEN 865
Cdd:COG1196 437 EEEEEEAL--EEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAAL 514
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 866 QRIGKPLERENQKSLRYLEENQETFVPLESRNQRPLRSLEVEEEEQRIVKPLEKVSQDSLGSLAEENVQPLRYLEEDNCI 945
Cdd:COG1196 515 LLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALAR 594
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 946 NKSLLEDKTHKSLGSLEDRNGDSIIIPQESETQVSLRPPEEEDQRIVNHLEKESQEFSRSSEEEEQVMERSLEGENHESL 1025
Cdd:COG1196 595 GAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAAL 674
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 1026 SSVEKEDQMVESQLEKESQDSGKSLEDESQETFGPLEKENAESLRSLAGQDQEEQKLEQETQQTLRAVGNEQM-----AV 1100
Cdd:COG1196 675 LEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELleeeaLE 754
|
....*....
gi 815891005 1101 SPPEKVDPE 1109
Cdd:COG1196 755 ELPEPPDLE 763
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
71-257 |
7.74e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 41.48 E-value: 7.74e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 71 WREKLEAEVQRDNLAEELESVAGRCQQVRLARERTVQEAACSRRALEAEKNARgwlstQAAELERELEALRAAHEEERAH 150
Cdd:PRK04863 495 WDVARELLRRLREQRHLAEQLQQLRMRLSELEQRLRQQQRAERLLAEFCKRLG-----KNLDDEDELEQLQEELEARLES 569
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 151 LNAQAACAPRRPPAPPHgspvrapEVEDLARRLGE------VWRgavrDYQERVAHMESSLGQARERlSQAVRGA----- 219
Cdd:PRK04863 570 LSESVSEARERRMALRQ-------QLEQLQARIQRlaarapAWL----AAQDALARLREQSGEEFED-SQDVTEYmqqll 637
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 815891005 220 ---RECRLEVQQLQADRDSLQERREALEQRlEGRWQDRLQA 257
Cdd:PRK04863 638 ereRELTVERDELAARKQALDEEIERLSQP-GGSEDPRLNA 677
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| Filament |
pfam00038 |
Intermediate filament protein; |
7-313 |
5.98e-23 |
|
Intermediate filament protein;
Pssm-ID: 459643 [Multi-domain] Cd Length: 313 Bit Score: 101.54 E-value: 5.98e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 7 EESFQMWELNRRLEAYLTRVKTLEEQNQLLSAELGGLRAQSGDTSWRARA--DDELASLRILVDQRWREKLEAEVQRDNL 84
Cdd:pfam00038 1 NEKEQLQELNDRLASYIDKVRFLEQQNKLLETKISELRQKKGAEPSRLYSlyEKEIEDLRRQLDTLTVERARLQLELDNL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 85 AEELESVAGRCQQVRLARERTVQEAACSRRALEAEKNARGWLSTQAAELERELEALRAAHEEERAHLNAQAACAPRRPPA 164
Cdd:pfam00038 81 RLAAEDFRQKYEDELNLRTSAENDLVGLRKDLDEATLARVDLEAKIESLKEELAFLKKNHEEEVRELQAQVSDTQVNVEM 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 165 PPHGSP--------VRApEVEDLARR----LGEVWRGAVRDYQERVAHMESSLGQARERLSQAVRGARECRLEVQQLQAD 232
Cdd:pfam00038 161 DAARKLdltsalaeIRA-QYEEIAAKnreeAEEWYQSKLEELQQAAARNGDALRSAKEEITELRRTIQSLEIELQSLKKQ 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 233 RDSLQERREALEQRLEGrwqdrlqATDKFQLAVEALEQEKQGLQSQIAQILEGGQQLAHLKMSLSLEVATYRTLLEAENS 312
Cdd:pfam00038 240 KASLERQLAETEERYEL-------QLADYQELISELEAELQETRQEMARQLREYQELLNVKLALDIEIATYRKLLEGEEC 312
|
.
gi 815891005 313 R 313
Cdd:pfam00038 313 R 313
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
25-315 |
2.59e-10 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 65.73 E-value: 2.59e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 25 RVKTLEEQNQLLSAELGGLRaqsgdtswRARADDELASLRILVDQRWREKLEAEVQRDNLAEELESVAGRCQQVRLARER 104
Cdd:COG1196 214 RYRELKEELKELEAELLLLK--------LRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEE 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 105 TVQEAACSRRALEAEKNARGWLSTQAAELERELEALRAAHEEERAHLNAQAACAPRRPPAPPhgspVRAPEVEDLARRLG 184
Cdd:COG1196 286 AQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELE----EAEEELEEAEAELA 361
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 185 EVwRGAVRDYQERVAHMESSLGQARERLSQAVRGARECRLEVQQLQADRDSLQERREALEQRLEGRWQDRLQATDKFQLA 264
Cdd:COG1196 362 EA-EEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEE 440
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 815891005 265 VEALEQEKQGLQSQIAQILEGGQQLAHLKMSLSLEVATYRTLLEAENSRLQ 315
Cdd:COG1196 441 EEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAA 491
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
496-958 |
2.06e-09 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 63.24 E-value: 2.06e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 496 EKEADIEVKVENSSAQKTQESGLDTEETQDSQGPLQKETLKALGEEplmsLKIQNYETAGKENCNSSTEGHLGTLEGPEK 575
Cdd:PTZ00121 1429 EKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADE----AKKKAEEAKKADEAKKKAEEAKKKADEAKK 1504
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 576 EKQIPLKSLEEKNVESEKTLEngvpvlsELLGKEDTRTEDQelmSPKGTLKRFSSLGKESQEVVRPSKEGNLESwtAFKE 655
Cdd:PTZ00121 1505 AAEAKKKADEAKKAEEAKKAD-------EAKKAEEAKKADE---AKKAEEKKKADELKKAEELKKAEEKKKAEE--AKKA 1572
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 656 ESQHPLGFPGAEDqmLERLVEKEDQSFPRSPEEEDQEACRPLQKENQEPLGYEeaegQILERLIEKESQESLRSPEEEDQ 735
Cdd:PTZ00121 1573 EEDKNMALRKAEE--AKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAE----ELKKAEEEKKKVEQLKKKEAEEK 1646
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 736 EAGRSLQKENQEPLGYEEAEGQILERliEKESQESLRSAEEEDQEACRSLQKENQEPLGYEE-----------AEDQILE 804
Cdd:PTZ00121 1647 KKAEELKKAEEENKIKAAEEAKKAEE--DKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEElkkkeaeekkkAEELKKA 1724
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 805 RLIEKESQESLRSPEEEDQEAGRSLQKENQE--PLGYEEAEDQMLERLIEKESQESLKS--PEENQRIGKPLERE----- 875
Cdd:PTZ00121 1725 EEENKIKAEEAKKEAEEDKKKAEEAKKDEEEkkKIAHLKKEEEKKAEEIRKEKEAVIEEelDEEDEKRRMEVDKKikdif 1804
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 876 ---------NQKSLRYLEENQETFVPlESRNQRPLRSLEVEEEEQRIVKPLEKVSQDSLGSLAEENVQPLRYLEEDNciN 946
Cdd:PTZ00121 1805 dnfaniiegGKEGNLVINDSKEMEDS-AIKEVADSKNMQLEEADAFEKHKFNKNNENGEDGNKEADFNKEKDLKEDD--E 1881
|
490
....*....|..
gi 815891005 947 KSLLEDKTHKSL 958
Cdd:PTZ00121 1882 EEIEEADEIEKI 1893
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
496-1081 |
6.01e-09 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 61.70 E-value: 6.01e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 496 EKEADIEVKVENSSAQKTQESGLDTEETQDSQGPLQKETLKALGEEPLMSLKIQNYETAGKENCNSSTEGHLGTLEGPEK 575
Cdd:PTZ00121 1300 EKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKK 1379
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 576 EKQIPLKSLEEKNV-ESEKTLENGVPVLSELLGKEDTRTEDQELMSPKGTLKRFSSLGKESQEVvRPSKEGNLESWTAFK 654
Cdd:PTZ00121 1380 ADAAKKKAEEKKKAdEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEA-KKADEAKKKAEEAKK 1458
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 655 -EESQHPLGFPGAEDQMLERLVEKEDQSFPRSPEEEDQEACRPLQKENQEPLGYEEAEgqileRLIEKESQESLRSPEEE 733
Cdd:PTZ00121 1459 aEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAK-----KAEEAKKADEAKKAEEA 1533
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 734 DQeaGRSLQKENQEPLGYEEAEGQILERLIEKESQESLRSAEEEDQEACRSLQKENQeplgYEEAEDQILERLIEKESQ- 812
Cdd:PTZ00121 1534 KK--ADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKK----AEEARIEEVMKLYEEEKKm 1607
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 813 --ESLRSPEEEDQEAgRSLQKENQEPLGYEEAEDQMLErliEKESQESLKSPEENQRIGKP-LERENQKSLRYLEENQET 889
Cdd:PTZ00121 1608 kaEEAKKAEEAKIKA-EELKKAEEEKKKVEQLKKKEAE---EKKKAEELKKAEEENKIKAAeEAKKAEEDKKKAEEAKKA 1683
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 890 fvplESRNQRPLRSLEVEEEEQRIVKPLEKVSQDSLGSlAEEnvqpLRYLEEDNCINKSLLEDKTHkslgsledrngdsi 969
Cdd:PTZ00121 1684 ----EEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKK-AEE----LKKAEEENKIKAEEAKKEAE-------------- 1740
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 970 iipQESETQVSLRPPEEEDQRIVNHLEKESQEFSRSSEEEEQVMERSlegenheslssVEKEDQMVESQLEKESQDSGKS 1049
Cdd:PTZ00121 1741 ---EDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEE-----------LDEEDEKRRMEVDKKIKDIFDN 1806
|
570 580 590 600
....*....|....*....|....*....|....*....|....*
gi 815891005 1050 LE-------------DESQETFGPLEKENAESLRSLAGQDQEEQK 1081
Cdd:PTZ00121 1807 FAniieggkegnlviNDSKEMEDSAIKEVADSKNMQLEEADAFEK 1851
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
14-315 |
1.19e-08 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 60.34 E-value: 1.19e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 14 ELNRRLEAYLTRVKTLEEQNQLLSAELGGLRAQsgdtswRARADDELASLRILVDQRWREKLEAEVQRDNLAEELESVAG 93
Cdd:COG1196 236 ELEAELEELEAELEELEAELEELEAELAELEAE------LEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEE 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 94 RCQQVRLARERTVQEaacsRRALEAEKNArgwLSTQAAELERELEALRAAHEEERAHLNAQAAcaprrppapphgspvra 173
Cdd:COG1196 310 RRRELEERLEELEEE----LAELEEELEE---LEEELEELEEELEEAEEELEEAEAELAEAEE----------------- 365
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 174 pEVEDLARRLGEvWRGAVRDYQERVAHMESSLGQARERLSQAVRGARECRLEVQQLQADRDSLQERREALEQRLEGRWQD 253
Cdd:COG1196 366 -ALLEAEAELAE-AEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEA 443
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 815891005 254 RLQATDKFQLAVEALEQEKQGLQSQIAQILEGGQQLAHLKMSLSLEVATYRTLLEAENSRLQ 315
Cdd:COG1196 444 LEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEG 505
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
17-246 |
1.30e-08 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 60.31 E-value: 1.30e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 17 RRLEAYLTRVKTLEEQNQLLS--AELGGLRAQSGDTswRARADDELASLRILVDQRWREKLEAEVQRdnLAEELESVAGR 94
Cdd:COG4913 235 DDLERAHEALEDAREQIELLEpiRELAERYAAARER--LAELEYLRAALRLWFAQRRLELLEAELEE--LRAELARLEAE 310
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 95 CQQVRLARERTVQEaacsRRALEAEKNARGWlsTQAAELERELEALRAAHEEERAHLNaqaacaprrppapphgspvrap 174
Cdd:COG4913 311 LERLEARLDALREE----LDELEAQIRGNGG--DRLEQLEREIERLERELEERERRRA---------------------- 362
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 815891005 175 EVEDLARRLGEVW---RGAVRDYQERVAHMESSLGQARERLSQAVRGAREcrlEVQQLQADRDSLQERREALEQR 246
Cdd:COG4913 363 RLEALLAALGLPLpasAEEFAALRAEAAALLEALEEELEALEEALAEAEA---ALRDLRRELRELEAEIASLERR 434
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
14-273 |
2.40e-08 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 59.30 E-value: 2.40e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 14 ELNRRLEAYLTRVKTLEEQNQLLSAELGGLRAQSgdtswraraddELASLRILVDQRWREKLEAEVQRdnLAEELESVAG 93
Cdd:TIGR02168 285 ELQKELYALANEISRLEQQKQILRERLANLERQL-----------EELEAQLEELESKLDELAEELAE--LEEKLEELKE 351
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 94 RCQQVRLARERTVQEAACSRRALEAEKNARGWLSTQAAELERELEALRAAHEEERAHLNA-QAACAPRRPPAPPHGSPVR 172
Cdd:TIGR02168 352 ELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERlEDRRERLQQEIEELLKKLE 431
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 173 APEVEDLARRLGEVWRGAVrDYQERVAHMESSLGQARERLSQAVRGARECRLEVQQLQADRDSLQERREALEQRLEGR-- 250
Cdd:TIGR02168 432 EAELKELQAELEELEEELE-ELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVka 510
|
250 260
....*....|....*....|....
gi 815891005 251 -WQDRLQATDKFQLAVEALEQEKQ 273
Cdd:TIGR02168 511 lLKNQSGLSGILGVLSELISVDEG 534
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
469-929 |
2.57e-08 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 59.38 E-value: 2.57e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 469 EAKDGESSESRVSSIFQEDEGQIWELVEKEADIEVKVENSSAQKTQESGLDTEETQDSQGPLQKETLKALGEEplmsLKI 548
Cdd:PTZ00121 1376 AKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADE----AKK 1451
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 549 QNYETAGKENCNSSTEghlgtlegpEKEKQIPLKSLEE---KNVESEKTLENGVPVLSELLGKEDTRTEDQELMSPKGtl 625
Cdd:PTZ00121 1452 KAEEAKKAEEAKKKAE---------EAKKADEAKKKAEeakKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEE-- 1520
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 626 krfsslgKESQEVVRPSKEGNLESWTAFKEESQHPLGFPGAEDqmLERLVEKEDQSFPRSPEEEDQEACRPLQKENQepl 705
Cdd:PTZ00121 1521 -------AKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEE--LKKAEEKKKAEEAKKAEEDKNMALRKAEEAKK--- 1588
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 706 gYEEAEGQILERLIEKESQ---ESLRSPEEEDQEAgRSLQKENQEPLGYEEAEGQILErliEKESQESLRSAEEEDQEAC 782
Cdd:PTZ00121 1589 -AEEARIEEVMKLYEEEKKmkaEEAKKAEEAKIKA-EELKKAEEEKKKVEQLKKKEAE---EKKKAEELKKAEEENKIKA 1663
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 783 RSLQKENQEPlgYEEAEDQILERLIEKESQESLRSPEEEDQEAGRSLQKENQEPLGYEEAEDQMLERLIEKEsqESLKSP 862
Cdd:PTZ00121 1664 AEEAKKAEED--KKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAE--EAKKEA 1739
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 815891005 863 EENQRIGKPL--ERENQKSLRYLEENQETFVPLESRNQRPLRSLEVEEEEQRIVKPLEKVSQDSLGSLA 929
Cdd:PTZ00121 1740 EEDKKKAEEAkkDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKIKDIFDNFA 1808
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
17-297 |
7.09e-08 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 58.00 E-value: 7.09e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 17 RRLEAYLTRVKTLEEQNQLLSAELGGLRAqsgdtsWRARADDELASLRILVDQRWREK--LEAEVQRDNLAEELESVAGR 94
Cdd:COG4913 610 AKLAALEAELAELEEELAEAEERLEALEA------ELDALQERREALQRLAEYSWDEIdvASAEREIAELEAELERLDAS 683
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 95 CQQVRLARERtVQEAACSRRALEAEKNArgwLSTQAAELERELEALRAAHEEERAHLNAqaacaprrppappHGSPVRAP 174
Cdd:COG4913 684 SDDLAALEEQ-LEELEAELEELEEELDE---LKGEIGRLEKELEQAEEELDELQDRLEA-------------AEDLARLE 746
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 175 EVEDLARRLGE-----VWRGAVRDYQERVAHMESSLGQARERLSQAVRGA-RECRLEVQQLQADRDSLQERREALEQ--- 245
Cdd:COG4913 747 LRALLEERFAAalgdaVERELRENLEERIDALRARLNRAEEELERAMRAFnREWPAETADLDADLESLPEYLALLDRlee 826
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 815891005 246 ----RLEGRWQDRLQatdkfqlavEALEQEKQGLQSQIAQ-ILEGGQQLAHLKMSLS 297
Cdd:COG4913 827 dglpEYEERFKELLN---------ENSIEFVADLLSKLRRaIREIKERIDPLNDSLK 874
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
676-1157 |
9.56e-08 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 57.46 E-value: 9.56e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 676 EKEDQSFPRSPEEEDQEACRPLQKENQEPLGYEEAEGQILE---RLIEKESQESLRSPEEEDQEAGRSLQKENQEPLGYE 752
Cdd:PTZ00121 1342 KKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAakkKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKAD 1421
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 753 EAEgqilERLIEKESQESLRSAEEEDQEAcRSLQKENQEPLGYEEAEdqilERLIEKESQESLRSPEEEDQEAgRSLQKE 832
Cdd:PTZ00121 1422 EAK----KKAEEKKKADEAKKKAEEAKKA-DEAKKKAEEAKKAEEAK----KKAEEAKKADEAKKKAEEAKKA-DEAKKK 1491
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 833 NQEPlgyEEAEDQMLERLIEKESQESLKSPEENQRIGKPLERENQKSLRYLEENQETFVPLESRNQRPLRSLE----VEE 908
Cdd:PTZ00121 1492 AEEA---KKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEekkkAEE 1568
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 909 ----EEQR--------IVKPLEKVSQDSLGSLAEEN----VQPLRYLEEDNCINKSLL-EDKTHKSLGSLEDRNGDSI-- 969
Cdd:PTZ00121 1569 akkaEEDKnmalrkaeEAKKAEEARIEEVMKLYEEEkkmkAEEAKKAEEAKIKAEELKkAEEEKKKVEQLKKKEAEEKkk 1648
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 970 ---IIPQESETQV---SLRPPEEEDQRIVNHLEKesqEFSRSSEEEEQVMERSLEGENHESLSSVEKEDQMVESQLEKES 1043
Cdd:PTZ00121 1649 aeeLKKAEEENKIkaaEEAKKAEEDKKKAEEAKK---AEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAE 1725
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 1044 QDSGKSLEDESQETfgPLEKENAESLRSLAGQDQEEQKLEQETQQTLRAVGNEQMAVSPPEKVDPELPKPLGNDQEIARS 1123
Cdd:PTZ00121 1726 EENKIKAEEAKKEA--EEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKIKDI 1803
|
490 500 510
....*....|....*....|....*....|....*
gi 815891005 1124 lgKENQESLVSLKEKGIETV-KSLETEIIEPLETA 1157
Cdd:PTZ00121 1804 --FDNFANIIEGGKEGNLVInDSKEMEDSAIKEVA 1836
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
7-282 |
2.62e-07 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 55.83 E-value: 2.62e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 7 EESFQMWELNRRLEAYLTRVKTLEEQNQLLSAELGGLRAQsgdtswRARADDELASLRilvdqrwREKLEAEVQRDNLAE 86
Cdd:TIGR02168 723 ELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAE------IEELEERLEEAE-------EELAEAEAEIEELEA 789
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 87 ELESVAGRCQQVRLARERTVQEAACSRRALEAEKNARGWLSTQAAELERELEALRAAHEEERAHLNAQaacaprrppapp 166
Cdd:TIGR02168 790 QIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESL------------ 857
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 167 hgspvrAPEVEDLARRLGEVWRGAVRDYQERvAHMESSLGQARERLSQAVRGARECRLEVQQLQADRDSLQERREALEQR 246
Cdd:TIGR02168 858 ------AAEIEELEELIEELESELEALLNER-ASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELR 930
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 815891005 247 LEGRWQDRLQ----ATDKFQLAVEALEQEKQGLQSQIAQI 282
Cdd:TIGR02168 931 LEGLEVRIDNlqerLSEEYSLTLEEAEALENKIEDDEEEA 970
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
76-311 |
2.76e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 51.69 E-value: 2.76e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 76 EAEVQRDNLAEELESVAGRCQQVRLARERTVQEAACSRRALEAEKNARGWLSTQAAELERELEALRAAHEEERAHLNAQA 155
Cdd:COG4942 24 EAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQK 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 156 acaprrppapphgspvrapevEDLARRLGEVWRGAVRDYQERVAHMESSLGQAR-----ERLSQAVRG-ARECRLEVQQL 229
Cdd:COG4942 104 ---------------------EELAELLRALYRLGRQPPLALLLSPEDFLDAVRrlqylKYLAPARREqAEELRADLAEL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 230 QADRDSLQERREALEQRLEGRWQDR---LQATDKFQLAVEALEQEKQGLQSQIAQILEGGQQLAHLKMSLSLEVATYRTL 306
Cdd:COG4942 163 AALRAELEAERAELEALLAELEEERaalEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAER 242
|
....*
gi 815891005 307 LEAEN 311
Cdd:COG4942 243 TPAAG 247
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
59-314 |
4.00e-06 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 51.98 E-value: 4.00e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 59 ELASLRILVDQRWREKLEAEVQRDNLAEELESVAGRCQQVRLARERTVQEAACSRRALEAEKNARGWLSTQAAELERELE 138
Cdd:TIGR02168 678 EIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELT 757
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 139 ALraahEEERAHLNAQAACAPRRPPAPPHGSPVRAPEVEDLARRLgEVWRGAVRDYQERVAHMESSLGQARERLSQAVRG 218
Cdd:TIGR02168 758 EL----EAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEEL-KALREALDELRAELTLLNEEAANLRERLESLERR 832
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 219 ARECRLEVQQLQADRDSLQERREALEQRLEGRWQDRlqatDKFQLAVEALEQEKQGLQSQIAQILEGGQQLAHLKMSLSL 298
Cdd:TIGR02168 833 IAATERRLEDLEEQIEELSEDIESLAAEIEELEELI----EELESELEALLNERASLEEALALLRSELEELSEELRELES 908
|
250
....*....|....*.
gi 815891005 299 EVATYRTLLEAENSRL 314
Cdd:TIGR02168 909 KRSELRRELEELREKL 924
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
10-153 |
8.67e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 51.07 E-value: 8.67e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 10 FQMWELNRRLEAYLTRVKTLEEQNQLLSAELGGLRAQsgdtswRARADDELASLRILVDQ-------RWREKLE-AEVQR 81
Cdd:COG4913 281 LRLWFAQRRLELLEAELEELRAELARLEAELERLEAR------LDALREELDELEAQIRGnggdrleQLEREIErLEREL 354
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 815891005 82 DNLAEELESVAGRCQQVRLARERTVQE----AACSRRALEAEKNARGWLSTQAAELERELEALRAAHEEERAHLNA 153
Cdd:COG4913 355 EERERRRARLEALLAALGLPLPASAEEfaalRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIAS 430
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
14-250 |
2.09e-05 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 49.55 E-value: 2.09e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 14 ELNRRLEAYLTRVKTLEEQNQLLSAELGGLRAQSGDTSW-RARADDELASLRILVDQRWREKLEAEVQRDNLAEELESVA 92
Cdd:COG1196 327 ELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEaLLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELE 406
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 93 GRCQQVRLARERTVQEAACSRRALEAEKNARGWLSTQAAELERELEALRAAHEEERAHLNAQAACAPRRPPAPPHGSPVR 172
Cdd:COG1196 407 EAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEEL 486
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 173 APEVEDLARRLGEVWRGAVRDYQERVAHMESSLGQARERLS---------QAVRGARECRLEVQQLQADRDSLQERREAL 243
Cdd:COG1196 487 AEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAvligveaayEAALEAALAAALQNIVVEDDEVAAAAIEYL 566
|
....*..
gi 815891005 244 EQRLEGR 250
Cdd:COG1196 567 KAAKAGR 573
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
666-919 |
4.38e-05 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 48.58 E-value: 4.38e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 666 AEDQMLERLVEKEDQSFPRSPEEEDQEACRPLQKENQEPLGYEEAEGQIL-----ERLIEKESQESLRSPEEEDQeagRS 740
Cdd:pfam17380 285 SERQQQEKFEKMEQERLRQEKEEKAREVERRRKLEEAEKARQAEMDRQAAiyaeqERMAMERERELERIRQEERK---RE 361
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 741 LQKENQEPLGYEEAEGQILERLIEKESQESLRSAEE-EDQEACRSLQKENQEPLGYEEAEDQILERLIEKESQESLRSPE 819
Cdd:pfam17380 362 LERIRQEEIAMEISRMRELERLQMERQQKNERVRQElEAARKVKILEEERQRKIQQQKVEMEQIRAEQEEARQREVRRLE 441
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 820 EEDQEAGRSLQKENQEP------LGYEEAEDQMLERLIEKESQESLKSPEENQRIgkpLEREnqkslryLEENQETFvpL 893
Cdd:pfam17380 442 EERAREMERVRLEEQERqqqverLRQQEEERKRKKLELEKEKRDRKRAEEQRRKI---LEKE-------LEERKQAM--I 509
|
250 260
....*....|....*....|....*.
gi 815891005 894 ESRNQRPLRSLEVEEEEQRIVKPLEK 919
Cdd:pfam17380 510 EEERKRKLLEKEMEERQKAIYEEERR 535
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
692-1289 |
5.38e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 48.60 E-value: 5.38e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 692 EACRPLQKEN--QEPLGYEEAEgqileRLIEKESQESLRSPEEEDQEAGRslQKENQEPLGYEEAEGQILERLIEKESQE 769
Cdd:PTZ00121 1203 EAARKAEEERkaEEARKAEDAK-----KAEAVKKAEEAKKDAEEAKKAEE--ERNNEEIRKFEEARMAHFARRQAAIKAE 1275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 770 SLRSAEE----EDQEACRSLQKENQEplgyeEAEDQILERLIEKESQESLRSPEEEDQEAGRSLQKENQEPLGYEEAEDQ 845
Cdd:PTZ00121 1276 EARKADElkkaEEKKKADEAKKAEEK-----KKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKA 1350
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 846 MlerliEKESQESLKSPEENQRIGKPLERENQKSLRYLEENQETFVPLESRNQRPLRSLEVEEEEQRivKPLEKVSQDSL 925
Cdd:PTZ00121 1351 E-----AEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKK--AAAAKKKADEA 1423
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 926 GSLAEEnvqpLRYLEEdncINKSLLEDKTHKSLG--SLEDRNGDSIIIPQESETQVSLRPPEEEDQRIVNHLEKESQEFS 1003
Cdd:PTZ00121 1424 KKKAEE----KKKADE---AKKKAEEAKKADEAKkkAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAK 1496
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 1004 RSSEEEEQVMERSLEGENHESLSSVEKEDQMVESQLEKESQDSGKSLEDESQEtfgplEKENAESLRSLAGQDQEEQKLE 1083
Cdd:PTZ00121 1497 KKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKAD-----ELKKAEELKKAEEKKKAEEAKK 1571
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 1084 QETQQTLRAVGNEQMAVSPPEKVDPELPKPLGNDQEIARSLGKENQESLVSLKEKGIETVKSLETEIIEPLETAEEDLER 1163
Cdd:PTZ00121 1572 AEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEE 1651
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 1164 RKSIDTQEPLWSTEVARETVEPPEDEPPGSLGSVDENR--ETLTSLEKESQELSSLGKWNVE-------TRVEDSQQCLQ 1234
Cdd:PTZ00121 1652 LKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKaaEALKKEAEEAKKAEELKKKEAEekkkaeeLKKAEEENKIK 1731
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*....
gi 815891005 1235 VEEGLQEEQHQ----ESLREVKQELPSSGNQQRWEDVVEGKAVGQEAPLATTGVGTEDK 1289
Cdd:PTZ00121 1732 AEEAKKEAEEDkkkaEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDE 1790
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
42-281 |
9.62e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 47.60 E-value: 9.62e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 42 GLRAQSGDtswRARADDelaslRILVDQRW------REKLEA-EVQRDNLAEELESVAGRCQQVRLARERTVQEAACSRR 114
Cdd:COG4913 581 GQVKGNGT---RHEKDD-----RRRIRSRYvlgfdnRAKLAAlEAELAELEEELAEAEERLEALEAELDALQERREALQR 652
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 115 ALEAEKNARGWLSTQA--AELERELEALRAAHEEerahlnaqaacaprrppapphgspvrapevedlarrlgevwrgavr 192
Cdd:COG4913 653 LAEYSWDEIDVASAEReiAELEAELERLDASSDD---------------------------------------------- 686
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 193 dyqerVAHMESSLGQARERLSQAVRGARECRLEVQQLQADRDSLQERREALEQRLE-----GRWQDRLQATDKF-QLAVE 266
Cdd:COG4913 687 -----LAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEaaedlARLELRALLEERFaAALGD 761
|
250
....*....|....*.
gi 815891005 267 ALEQE-KQGLQSQIAQ 281
Cdd:COG4913 762 AVERElRENLEERIDA 777
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
195-333 |
1.03e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 47.60 E-value: 1.03e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 195 QERVAHMESSLGQARERLSQAVRgarecrlEVQQLQADRDSLQERREALEQRLEGRW---------------QDRLQATD 259
Cdd:COG4913 609 RAKLAALEAELAELEEELAEAEE-------RLEALEAELDALQERREALQRLAEYSWdeidvasaereiaelEAELERLD 681
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 815891005 260 KFQLAVEALEQEKQGLQSQIAQILEGGQQLAHLKMSLSLEVATYRTLLEAENSRLQT-PGRGSQASLGFLDPKLK 333
Cdd:COG4913 682 ASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAaEDLARLELRALLEERFA 756
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
14-309 |
1.09e-04 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 47.36 E-value: 1.09e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 14 ELNRRLEAYLTRVKTLEEQNQLLSAELGGLRAQSGDTSWR-ARADDELASLRILVDQRWREKLEAEVQRDNLAEELESVA 92
Cdd:TIGR02168 243 ELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEiEELQKELYALANEISRLEQQKQILRERLANLERQLEELE 322
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 93 GRCQQVRLARERTVQEAACSRRALEAEKNARGWLSTQAAELERELEALRAAHEEERAHLNAQAACAPRRPPapphgspvr 172
Cdd:TIGR02168 323 AQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLEL--------- 393
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 173 apEVEDLARRLgEVWRGAVRDYQERVAHMESSLGQARERLSQAVRgaRECRLEVQQLQADRDSLQERREALEQRLEGRWQ 252
Cdd:TIGR02168 394 --QIASLNNEI-ERLEARLERLEDRRERLQQEIEELLKKLEEAEL--KELQAELEELEEELEELQEELERLEEALEELRE 468
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 815891005 253 DRLQATDKFQLA-------------VEALEQEKQGLQSQIAQILEGGQQLAHLKMSLS--LEV-ATYRTLLEA 309
Cdd:TIGR02168 469 ELEEAEQALDAAerelaqlqarldsLERLQENLEGFSEGVKALLKNQSGLSGILGVLSelISVdEGYEAAIEA 541
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
788-1114 |
2.07e-04 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 46.27 E-value: 2.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 788 ENQEPLGYEEAEDQILERLIEKESQESLRSPEEEDQEAGRSLQKENQEPLgYEEAEDQMLERLIEKESQESLKSPEENQR 867
Cdd:pfam17380 286 ERQQQEKFEKMEQERLRQEKEEKAREVERRRKLEEAEKARQAEMDRQAAI-YAEQERMAMERERELERIRQEERKRELER 364
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 868 IGKPLERENQKSLRYLEEnqetfvpLESRNQRPLRSLEVEEEEQRIVKPLEKVSQDSLGSLAEENVQPLRYLEEDNCINK 947
Cdd:pfam17380 365 IRQEEIAMEISRMRELER-------LQMERQQKNERVRQELEAARKVKILEEERQRKIQQQKVEMEQIRAEQEEARQREV 437
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 948 SLLEDKTHKSLGSLEDRNgdsiiipQESETQVS-LRPPEEEDQRIVNHLEKESQEFSRSSEEEEQVMERSLEgENHESLS 1026
Cdd:pfam17380 438 RRLEEERAREMERVRLEE-------QERQQQVErLRQQEEERKRKKLELEKEKRDRKRAEEQRRKILEKELE-ERKQAMI 509
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 1027 SVEKEDQMVESQLEK------ESQDSGKSLEDESQETFGPLEKENAESLRSLAGQDQEEQKLEQETQQTLRAVGNEQMAV 1100
Cdd:pfam17380 510 EEERKRKLLEKEMEErqkaiyEEERRREAEEERRKQQEMEERRRIQEQMRKATEERSRLEAMEREREMMRQIVESEKARA 589
|
330
....*....|....
gi 815891005 1101 SPPEKVDPELPKPL 1114
Cdd:pfam17380 590 EYEATTPITTIKPI 603
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
708-1255 |
6.12e-04 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 44.96 E-value: 6.12e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 708 EEAEGQILERLIEKESQESLRSPEEEDQEAGRSLQKENQEplgyEEAEGQILERLIEKESQESLRSAEEEDQEACRSLQK 787
Cdd:pfam02463 180 EETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKL----ELEEEYLLYLDYLKLNEERIDLLQELLRDEQEEIES 255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 788 ENQEPLGYEEAEDQILERLIEKESQESLRspEEEDQEAGRSLQKENQEPLGYEEAEDQMLERLIEKESQESLKSPEENQR 867
Cdd:pfam02463 256 SKQEIEKEEEKLAQVLKENKEEEKEKKLQ--EEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEKKKAEKELKKE 333
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 868 IGKPLERENQKSLryLEENQETFVPLESRNQRPLRSLEVEEEEQRIVKPLEKVSQDSLGSLAEENVQP-----------L 936
Cdd:pfam02463 334 KEEIEELEKELKE--LEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELkseeekeaqllL 411
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 937 RYLEEDNCINKSLLEDKTHKSLGSLEDRNGDSIIIPQESETQVSLRPPEEEDQRIVNHLEKESQEFSRSSEEEEQVMERS 1016
Cdd:pfam02463 412 ELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQLELLLS 491
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 1017 LEGENHESLSSVEKEDQMVESQLEKESQDSGKSLEDESQETFGPLEKENAESLRSLAGQDQEEqKLEQETQQTLRAVGNE 1096
Cdd:pfam02463 492 RQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENYKVAISTAVIVEVS-ATADEVEERQKLVRAL 570
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 1097 QMAVSPPEKVDPELPKPLGNDQEIARslgKENQESLVSLKEKGIETVKSLETEIIEPLETAEEDLERRKSIDTQEPLWST 1176
Cdd:pfam02463 571 TELPLGARKLRLLIPKLKLPLKSIAV---LEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTELTKLKESAKAKESG 647
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 815891005 1177 EVARETVEPPEDEPPGSLGSVDENRETLTSLEKESQELSSLGKWNVETRVEDSQQCLQVEEGLQEEQHQESLREVKQEL 1255
Cdd:pfam02463 648 LRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLEAEELLADR 726
|
|
| PTZ00341 |
PTZ00341 |
Ring-infected erythrocyte surface antigen; Provisional |
576-865 |
8.96e-04 |
|
Ring-infected erythrocyte surface antigen; Provisional
Pssm-ID: 173534 [Multi-domain] Cd Length: 1136 Bit Score: 44.39 E-value: 8.96e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 576 EKQIPLKSLEEKN----VESEKTLENGVPVLSeLLGKEDTRTEDQELMSPKGTLKR-FSSLGKESQEVVRPSKEGNLESW 650
Cdd:PTZ00341 865 EQILSDEGLDEKKlkkrAESLKKLANAIEKYA-GGGKKDKKAKKKDAKDLSGNIAHeINLINKELKNQNENVPEHLKEHA 943
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 651 TAFKEESqhplgfpgAEDQMLERLVEKEDQSFPRSPEEEDQEACRPLQKENQEplgyEEAEGQILERlIEKESQESLRSP 730
Cdd:PTZ00341 944 EANIEED--------AEENVEEDAEENVEENVEENVEENVEENVEENVEENVE----ENVEENVEEN-VEENIEENVEEN 1010
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 731 EEEDQEagrslqkENQEPlgYEEAEGQILERLIEKESQESLRSAEEEDQEACRSLQKENQEPLGYEEAEDqilerlIEKE 810
Cdd:PTZ00341 1011 VEENIE-------ENVEE--YDEENVEEVEENVEEYDEENVEEIEENAEENVEENIEENIEEYDEENVEE------IEEN 1075
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 815891005 811 SQESLRSPEEEDQEAGRSLQKENQEPLGYEEAEDQMLERLIEKESQESLKSPEEN 865
Cdd:PTZ00341 1076 IEENIEENVEENVEENVEEIEENVEENVEENAEENAEENAEENAEEYDDENPEEH 1130
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
113-308 |
1.14e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 43.85 E-value: 1.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 113 RRALEAEKNARGWLSTQAAELERELEALRAAHEEERAHLNAQAACAPRRPPAPphgspvrapEVEDLARRLGEVwRGAVR 192
Cdd:COG3206 167 ELRREEARKALEFLEEQLPELRKELEEAEAALEEFRQKNGLVDLSEEAKLLLQ---------QLSELESQLAEA-RAELA 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 193 DYQERVAHMESSLGQARERLSQAVR--GARECRLEVQQLQADRD--------------SLQERREALEQRLEGRWQDRLQ 256
Cdd:COG3206 237 EAEARLAALRAQLGSGPDALPELLQspVIQQLRAQLAELEAELAelsarytpnhpdviALRAQIAALRAQLQQEAQRILA 316
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 815891005 257 ATDK----FQLAVEALEQEKQGLQSQIAQILEGGQQLAHLKMSLSLEVATYRTLLE 308
Cdd:COG3206 317 SLEAeleaLQAREASLQAQLAQLEARLAELPELEAELRRLEREVEVARELYESLLQ 372
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
708-1109 |
1.17e-03 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 44.16 E-value: 1.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 708 EEAEGQILERLIEKESQ--ESLRSPEEEDQEAGRSLQKENQEPLGYEEAEGQILERLIEKESQESLRSAEEEDQEACRSL 785
Cdd:COG1196 357 EAELAEAEEALLEAEAElaEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEE 436
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 786 QKENQEPLgyEEAEDQILERLIEKESQESLRSPEEEDQEAGRSLQKENQEPLGYEEAEDQMLERLIEKESQESLKSPEEN 865
Cdd:COG1196 437 EEEEEEAL--EEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAAL 514
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 866 QRIGKPLERENQKSLRYLEENQETFVPLESRNQRPLRSLEVEEEEQRIVKPLEKVSQDSLGSLAEENVQPLRYLEEDNCI 945
Cdd:COG1196 515 LLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALAR 594
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 946 NKSLLEDKTHKSLGSLEDRNGDSIIIPQESETQVSLRPPEEEDQRIVNHLEKESQEFSRSSEEEEQVMERSLEGENHESL 1025
Cdd:COG1196 595 GAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAAL 674
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 1026 SSVEKEDQMVESQLEKESQDSGKSLEDESQETFGPLEKENAESLRSLAGQDQEEQKLEQETQQTLRAVGNEQM-----AV 1100
Cdd:COG1196 675 LEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELleeeaLE 754
|
....*....
gi 815891005 1101 SPPEKVDPE 1109
Cdd:COG1196 755 ELPEPPDLE 763
|
|
| PTZ00341 |
PTZ00341 |
Ring-infected erythrocyte surface antigen; Provisional |
718-891 |
1.63e-03 |
|
Ring-infected erythrocyte surface antigen; Provisional
Pssm-ID: 173534 [Multi-domain] Cd Length: 1136 Bit Score: 43.62 E-value: 1.63e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 718 LIEKESQESLRSPEEEDQEAGRSLQKENQEPLGYEEAEGQILERLIEKESQESLRSAEEEDQEACRSLQKENQEPLGYEE 797
Cdd:PTZ00341 923 LINKELKNQNENVPEHLKEHAEANIEEDAEENVEEDAEENVEENVEENVEENVEENVEENVEENVEENVEENVEENVEEN 1002
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 798 AEDQILERL---IEKESQESLRSPEEEDQEAGRSLQKENQEPL--GYEEAEDQMLERLIEKESQESLKSPEEN--QRIGK 870
Cdd:PTZ00341 1003 IEENVEENVeenIEENVEEYDEENVEEVEENVEEYDEENVEEIeeNAEENVEENIEENIEEYDEENVEEIEENieENIEE 1082
|
170 180
....*....|....*....|.
gi 815891005 871 PLERENQKSLRYLEENQETFV 891
Cdd:PTZ00341 1083 NVEENVEENVEEIEENVEENV 1103
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
697-940 |
2.10e-03 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 43.00 E-value: 2.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 697 LQKENQEplgYEEAEGQILERLIEKESQESLRSPEEEDQEAgrsLQKENQEplgYEEAEGQILERLIEKEsqESLRSAEE 776
Cdd:COG1196 276 LEELELE---LEEAQAEEYELLAELARLEQDIARLEERRRE---LEERLEE---LEEELAELEEELEELE--EELEELEE 344
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 777 EDQEACRSLQKENQEPLGYEEAEDQILERLIEKESQESLRspEEEDQEAGRSLQKENQEPLGYEEAEDQMLERLIEKESQ 856
Cdd:COG1196 345 ELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEEL--AEELLEALRAAAELAAQLEELEEAEEALLERLERLEEE 422
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 857 ES--LKSPEENQRIGKPLERENQKSLRYLEENQETFVPLESRNQRPLRSLEVEEEEQRIVKPLEKVSQDSLGSLAEENVQ 934
Cdd:COG1196 423 LEelEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEAD 502
|
....*.
gi 815891005 935 PLRYLE 940
Cdd:COG1196 503 YEGFLE 508
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
14-318 |
2.62e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 43.02 E-value: 2.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 14 ELNRRLEAYLTRVKTLEEQNQLLsaELGGLRAQSgdtswrarADDELASLRILVDQRWREKLEAEvQRDNLAEE------ 87
Cdd:COG3096 407 VQQTRAIQYQQAVQALEKARALC--GLPDLTPEN--------AEDYLAAFRAKEQQATEEVLELE-QKLSVADAarrqfe 475
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 88 -----LESVAGrcQQVRLARERTVQEAACSRRALEAEKNARGWLSTQAAELERELEALRAAHEEerahlnaqaacaprrp 162
Cdd:COG3096 476 kayelVCKIAG--EVERSQAWQTARELLRRYRSQQALAQRLQQLRAQLAELEQRLRQQQNAERL---------------- 537
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 163 papphgspvrapeVEDLARRLGEVwrgavRDYQERVAHMESSLGQARERLSQAVRGARECRLEVQQlqaDRDSLQERREA 242
Cdd:COG3096 538 -------------LEEFCQRIGQQ-----LDAAEELEELLAELEAQLEELEEQAAEAVEQRSELRQ---QLEQLRARIKE 596
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 243 LEQRlEGRWQDrlqatdkfqlAVEALEQekqgLQSQIAQILEGGQQL-AHLKMSLSLE---------VATYRTLLEAENS 312
Cdd:COG3096 597 LAAR-APAWLA----------AQDALER----LREQSGEALADSQEVtAAMQQLLEREreatverdeLAARKQALESQIE 661
|
....*.
gi 815891005 313 RLQTPG 318
Cdd:COG3096 662 RLSQPG 667
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
14-282 |
2.93e-03 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 42.75 E-value: 2.93e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 14 ELNRRLEAYLTRVKTLEEQNQLLSAELGGLRAQSGDTswraraDDELASLRILVDQRWREKLEAEVQR-DNLAEELESVA 92
Cdd:TIGR02169 748 SLEQEIENVKSELKELEARIEELEEDLHKLEEALNDL------EARLSHSRIPEIQAELSKLEEEVSRiEARLREIEQKL 821
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 93 GRCQQVRLARERTVQEAACSRRALEAEKNARGW----LSTQAAELERELEALRAA---HEEERAHLNAQAACAPRRPPAP 165
Cdd:TIGR02169 822 NRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKeienLNGKKEELEEELEELEAAlrdLESRLGDLKKERDELEAQLREL 901
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 166 PHGSPVRAPEVEDLARRLGEVwRGAVRDYQERVAHMESSLGQARErlsqavrgARECRLEVQQLQADRDSLQERREALEQ 245
Cdd:TIGR02169 902 ERKIEELEAQIEKKRKRLSEL-KAKLEALEEELSEIEDPKGEDEE--------IPEEELSLEDVQAELQRVEEEIRALEP 972
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 815891005 246 ---RLEGRWQDRLQATDKFQLAVEALEQEKQGLQSQIAQI 282
Cdd:TIGR02169 973 vnmLAIQEYEEVLKRLDELKEKRAKLEEERKAILERIEEY 1012
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
744-1089 |
3.46e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 42.42 E-value: 3.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 744 ENQEPLGYEEAEGQILERLIEKESQESLRSAEEEDQEACRSLQKENQEPLgYEEAEDQILERLIEKEsqeslRSPEEEDQ 823
Cdd:pfam17380 286 ERQQQEKFEKMEQERLRQEKEEKAREVERRRKLEEAEKARQAEMDRQAAI-YAEQERMAMERERELE-----RIRQEERK 359
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 824 eagRSLQKENQEPLGYEEAEDQMLERLIEKESQ--ESLKSPEENQRIGKPLERENQKSLRYLEENQETfVPLESRNQRPL 901
Cdd:pfam17380 360 ---RELERIRQEEIAMEISRMRELERLQMERQQknERVRQELEAARKVKILEEERQRKIQQQKVEMEQ-IRAEQEEARQR 435
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 902 RSLEVEEEEQRivkPLEKVSQDSLGSlaEENVQPLRYLEEDNCINKSLLEDKTHKSLGSLEDRNgdsIIIPQESETQVSL 981
Cdd:pfam17380 436 EVRRLEEERAR---EMERVRLEEQER--QQQVERLRQQEEERKRKKLELEKEKRDRKRAEEQRR---KILEKELEERKQA 507
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 982 RPPEEEDQRIvnhLEKESQEFSRSSEEEeqvmERSLEGENHESLSSVEKEDQMVESQLEKESqdsgksledESQETFGPL 1061
Cdd:pfam17380 508 MIEEERKRKL---LEKEMEERQKAIYEE----ERRREAEEERRKQQEMEERRRIQEQMRKAT---------EERSRLEAM 571
|
330 340
....*....|....*....|....*...
gi 815891005 1062 EKENaESLRSLAGQDQEEQKLEQETQQT 1089
Cdd:pfam17380 572 ERER-EMMRQIVESEKARAEYEATTPIT 598
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
672-858 |
4.47e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 42.03 E-value: 4.47e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 672 ERLVEKEDQSFPRSPEEEDQEACRPLQKENQEPLGYEEAEGQILERLIEKESQESLRSPEEEDQEAGRSLQKENQEPLGY 751
Cdd:pfam17380 410 ERQRKIQQQKVEMEQIRAEQEEARQREVRRLEEERAREMERVRLEEQERQQQVERLRQQEEERKRKKLELEKEKRDRKRA 489
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 752 EEAEGQILERLIEKESQESLrsaEEEDQEACRSLQKENQEPLGYEEAEDQIL--ERLIEKESQESLRSPEEEDQEAgrsl 829
Cdd:pfam17380 490 EEQRRKILEKELEERKQAMI---EEERKRKLLEKEMEERQKAIYEEERRREAeeERRKQQEMEERRRIQEQMRKAT---- 562
|
170 180
....*....|....*....|....*....
gi 815891005 830 qkENQEPLGYEEAEDQMLERLIEKESQES 858
Cdd:pfam17380 563 --EERSRLEAMEREREMMRQIVESEKARA 589
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
180-315 |
4.88e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 41.82 E-value: 4.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 180 ARRLGEVWRGAVRDYQERVAHMESSLGQARERLSQAVRGARECRLEVQQLQADR-DSLQERREALEQRLEGRWQDRLQ-- 256
Cdd:COG4913 286 AQRRLELLEAELEELRAELARLEAELERLEARLDALREELDELEAQIRGNGGDRlEQLEREIERLERELEERERRRARle 365
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 257 -ATDKFQLAVEALEQEKQGLQSQIAQILEGGQQLAHlkmslslEVATYRTLLEAENSRLQ 315
Cdd:COG4913 366 aLLAALGLPLPASAEEFAALRAEAAALLEALEEELE-------ALEEALAEAEAALRDLR 418
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
129-314 |
6.78e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 41.44 E-value: 6.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 129 QAAELERELEALRAAHEEERAHLNAQAACAPrrppapphgspvRAPEVEDLARRLGEV------WRGAVRDY---QERVA 199
Cdd:COG4913 611 KLAALEAELAELEEELAEAEERLEALEAELD------------ALQERREALQRLAEYswdeidVASAEREIaelEAELE 678
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 200 HMESS---LGQARERLSQAVRGARECRLEVQQLQADRDSLQERREALEQRLEgRWQDRLQATDKFQLAVEALEqekqgLQ 276
Cdd:COG4913 679 RLDASsddLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELD-ELQDRLEAAEDLARLELRAL-----LE 752
|
170 180 190
....*....|....*....|....*....|....*...
gi 815891005 277 SQIAQILeGGQQLAHLKMSLSLEVATYRTLLEAENSRL 314
Cdd:COG4913 753 ERFAAAL-GDAVERELRENLEERIDALRARLNRAEEEL 789
|
|
| PTZ00341 |
PTZ00341 |
Ring-infected erythrocyte surface antigen; Provisional |
667-824 |
7.20e-03 |
|
Ring-infected erythrocyte surface antigen; Provisional
Pssm-ID: 173534 [Multi-domain] Cd Length: 1136 Bit Score: 41.31 E-value: 7.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 667 EDQMLERLVEKEDQSFPRSPEEEDQEACRPLQKENQEPlgYEEAEGQILERLIEKESQESLRSPEEEDQEAGRSLQKENQ 746
Cdd:PTZ00341 984 EENVEENVEENVEENVEENIEENVEENVEENIEENVEE--YDEENVEEVEENVEEYDEENVEEIEENAEENVEENIEENI 1061
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 815891005 747 EPlgYEEAEGQILERLIEKESQESLRSAEEEDQEACRSLQKENQEPLGYEEAEDQILERLIEKESQeslrSPEEEDQE 824
Cdd:PTZ00341 1062 EE--YDEENVEEIEENIEENIEENVEENVEENVEEIEENVEENVEENAEENAEENAEENAEEYDDE----NPEEHNEE 1133
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
71-257 |
7.74e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 41.48 E-value: 7.74e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 71 WREKLEAEVQRDNLAEELESVAGRCQQVRLARERTVQEAACSRRALEAEKNARgwlstQAAELERELEALRAAHEEERAH 150
Cdd:PRK04863 495 WDVARELLRRLREQRHLAEQLQQLRMRLSELEQRLRQQQRAERLLAEFCKRLG-----KNLDDEDELEQLQEELEARLES 569
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 151 LNAQAACAPRRPPAPPHgspvrapEVEDLARRLGE------VWRgavrDYQERVAHMESSLGQARERlSQAVRGA----- 219
Cdd:PRK04863 570 LSESVSEARERRMALRQ-------QLEQLQARIQRlaarapAWL----AAQDALARLREQSGEEFED-SQDVTEYmqqll 637
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 815891005 220 ---RECRLEVQQLQADRDSLQERREALEQRlEGRWQDRLQA 257
Cdd:PRK04863 638 ereRELTVERDELAARKQALDEEIERLSQP-GGSEDPRLNA 677
|
|
| RecN |
COG0497 |
DNA repair ATPase RecN [Replication, recombination and repair]; |
75-293 |
8.64e-03 |
|
DNA repair ATPase RecN [Replication, recombination and repair];
Pssm-ID: 440263 [Multi-domain] Cd Length: 555 Bit Score: 40.83 E-value: 8.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 75 LEAEVQRD------NLAEELESVAGRCQQVR-LARERTVQEAACSRRALEAEknargWLSTQAAELER------ELEALr 141
Cdd:COG0497 138 LDPDAQRElldafaGLEELLEEYREAYRAWRaLKKELEELRADEAERARELD-----LLRFQLEELEAaalqpgEEEEL- 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 815891005 142 aahEEERAHL-NAQAACAPRRPPAPP-HGSPVRA-PEVEDLARRLgevwrgavrdyqERVAHMESSLGQARERLSQAVRG 218
Cdd:COG0497 212 ---EEERRRLsNAEKLREALQEALEAlSGGEGGAlDLLGQALRAL------------ERLAEYDPSLAELAERLESALIE 276
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 815891005 219 ARECRLEVQQLQADRDSLQERREALEQRLegrwqDRLQA-TDKFQLAVEALEQEKQGLQSQIAQILEGGQQLAHLK 293
Cdd:COG0497 277 LEEAASELRRYLDSLEFDPERLEEVEERL-----ALLRRlARKYGVTVEELLAYAEELRAELAELENSDERLEELE 347
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|
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