NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|784640339|ref|NP_001292592|]
View 

protein THEMIS isoform 2 [Mus musculus]

Protein Classification

CABIT domain-containing protein( domain architecture ID 12119421)

CABIT domain-containing protein

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
CABIT pfam12736
Cell-cycle sustaining, positive selection,; The 'CABIT' domain (for 'cysteine-containing, all- ...
1-177 2.37e-43

Cell-cycle sustaining, positive selection,; The 'CABIT' domain (for 'cysteine-containing, all- in Themis') is found in a newly identified gene family that has three mammalian homologs (Themis, Icb1 and 9130404H23Rik) that encode proteins with two CABIT domains and a highly conserved proline-rich region. In contrast, Fam59A, Fam59B and related proteins from mammals to cnidarians, including the insect Serrano proteins, have a single copy of the CABIT domain, a proline-rich region and often a C-terminal SAM (sterile-motif) domain. Multiple-sequence alignment has predicted that the CABIT domain adopts an all-strand structure with at least 12 strands, ie a dyad of six-stranded beta-barrel units. The CABIT domain contains a nearly absolutely conserved cysteine residue which is likely to be central to its function. CABIT domain proteins function downstream of tyrosine kinase signalling and interact with GRB2.


:

Pssm-ID: 463686  Cd Length: 261  Bit Score: 154.53  E-value: 2.37e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 784640339    1 MADKTPYLSIEEITRTVNI-------GPSRLGHPCFYHLKDIKLENLIIKQGEPIRFNSVEEINGET----------LVN 63
Cdd:pfam12736  66 LADEGPFESVEELARSFPIrvlakeeGPDSVGVPMFRSSDDMSLANFTLQAGEELTLLGVEESSGGKeelasvtvgdYLI 145
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 784640339   64 CgvVRNHQSHSFTLPLSQEGEFYE-CEDEHIYTLKEIVE-WKIPKNRTRTVKLTDFSNKwdstnpfpEDFYGTLILKPVY 141
Cdd:pfam12736 146 C--LVNQTGESVLLPLSCRGRFSEeCEDEGEYTLREIVEkFKLPLNVKVVVGDPPRGDL--------DAFTGELRLEPVY 215
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*.
gi 784640339  142 EIQGVLK--------FQKDIVRILPSLDVEVKDIT--DSYDANWFL 177
Cdd:pfam12736 216 EEQAVVAspllipvpFRKLEVPIPSDLDVEVAEVTsaDNKDYEEFL 261
CABIT pfam12736
Cell-cycle sustaining, positive selection,; The 'CABIT' domain (for 'cysteine-containing, all- ...
193-435 5.41e-36

Cell-cycle sustaining, positive selection,; The 'CABIT' domain (for 'cysteine-containing, all- in Themis') is found in a newly identified gene family that has three mammalian homologs (Themis, Icb1 and 9130404H23Rik) that encode proteins with two CABIT domains and a highly conserved proline-rich region. In contrast, Fam59A, Fam59B and related proteins from mammals to cnidarians, including the insect Serrano proteins, have a single copy of the CABIT domain, a proline-rich region and often a C-terminal SAM (sterile-motif) domain. Multiple-sequence alignment has predicted that the CABIT domain adopts an all-strand structure with at least 12 strands, ie a dyad of six-stranded beta-barrel units. The CABIT domain contains a nearly absolutely conserved cysteine residue which is likely to be central to its function. CABIT domain proteins function downstream of tyrosine kinase signalling and interact with GRB2.


:

Pssm-ID: 463686  Cd Length: 261  Bit Score: 134.50  E-value: 5.41e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 784640339  193 FPVVaevVEISQGNHLPQSI--LQREKTIVIHKKYQASRILASEIRSNF--PKRHFLIPISYKGKFKRRPRE--FPTAYD 266
Cdd:pfam12736   1 LPQV---VKVTSGIYGEGSVycLSKGDVLLIHGLKQAKKVVAQEVEEGRgvVGPKLLIPLSYPGLFKLLADEgpFESVEE 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 784640339  267 LqiAKSRKETLHVVATKAFHTLH------KELS----PVSVGDQFL---VHHSETTEVVFEGTRKVNVLTCEKvlNKTRE 333
Cdd:pfam12736  78 L--ARSFPIRVLAKEEGPDSVGVpmfrssDDMSlanfTLQAGEELTllgVEESSGGKEELASVTVGDYLICLV--NQTGE 153
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 784640339  334 DAQLPLYMEGGFVEVIHDKKQYQISELCTQFCWPFNVKVAVRDLSIKDDIlAATPGLQLEEDITDSYLLISDFANPEECW 413
Cdd:pfam12736 154 SVLLPLSCRGRFSEECEDEGEYTLREIVEKFKLPLNVKVVVGDPPRGDLD-AFTGELRLEPVYEEQAVVASPLLIPVPFR 232
                         250       260
                  ....*....|....*....|...
gi 784640339  414 EIPMS-RLNMTVRLVNGSSLPAD 435
Cdd:pfam12736 233 KLEVPiPSDLDVEVAEVTSADNK 255
 
Name Accession Description Interval E-value
CABIT pfam12736
Cell-cycle sustaining, positive selection,; The 'CABIT' domain (for 'cysteine-containing, all- ...
1-177 2.37e-43

Cell-cycle sustaining, positive selection,; The 'CABIT' domain (for 'cysteine-containing, all- in Themis') is found in a newly identified gene family that has three mammalian homologs (Themis, Icb1 and 9130404H23Rik) that encode proteins with two CABIT domains and a highly conserved proline-rich region. In contrast, Fam59A, Fam59B and related proteins from mammals to cnidarians, including the insect Serrano proteins, have a single copy of the CABIT domain, a proline-rich region and often a C-terminal SAM (sterile-motif) domain. Multiple-sequence alignment has predicted that the CABIT domain adopts an all-strand structure with at least 12 strands, ie a dyad of six-stranded beta-barrel units. The CABIT domain contains a nearly absolutely conserved cysteine residue which is likely to be central to its function. CABIT domain proteins function downstream of tyrosine kinase signalling and interact with GRB2.


Pssm-ID: 463686  Cd Length: 261  Bit Score: 154.53  E-value: 2.37e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 784640339    1 MADKTPYLSIEEITRTVNI-------GPSRLGHPCFYHLKDIKLENLIIKQGEPIRFNSVEEINGET----------LVN 63
Cdd:pfam12736  66 LADEGPFESVEELARSFPIrvlakeeGPDSVGVPMFRSSDDMSLANFTLQAGEELTLLGVEESSGGKeelasvtvgdYLI 145
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 784640339   64 CgvVRNHQSHSFTLPLSQEGEFYE-CEDEHIYTLKEIVE-WKIPKNRTRTVKLTDFSNKwdstnpfpEDFYGTLILKPVY 141
Cdd:pfam12736 146 C--LVNQTGESVLLPLSCRGRFSEeCEDEGEYTLREIVEkFKLPLNVKVVVGDPPRGDL--------DAFTGELRLEPVY 215
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*.
gi 784640339  142 EIQGVLK--------FQKDIVRILPSLDVEVKDIT--DSYDANWFL 177
Cdd:pfam12736 216 EEQAVVAspllipvpFRKLEVPIPSDLDVEVAEVTsaDNKDYEEFL 261
CABIT pfam12736
Cell-cycle sustaining, positive selection,; The 'CABIT' domain (for 'cysteine-containing, all- ...
193-435 5.41e-36

Cell-cycle sustaining, positive selection,; The 'CABIT' domain (for 'cysteine-containing, all- in Themis') is found in a newly identified gene family that has three mammalian homologs (Themis, Icb1 and 9130404H23Rik) that encode proteins with two CABIT domains and a highly conserved proline-rich region. In contrast, Fam59A, Fam59B and related proteins from mammals to cnidarians, including the insect Serrano proteins, have a single copy of the CABIT domain, a proline-rich region and often a C-terminal SAM (sterile-motif) domain. Multiple-sequence alignment has predicted that the CABIT domain adopts an all-strand structure with at least 12 strands, ie a dyad of six-stranded beta-barrel units. The CABIT domain contains a nearly absolutely conserved cysteine residue which is likely to be central to its function. CABIT domain proteins function downstream of tyrosine kinase signalling and interact with GRB2.


Pssm-ID: 463686  Cd Length: 261  Bit Score: 134.50  E-value: 5.41e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 784640339  193 FPVVaevVEISQGNHLPQSI--LQREKTIVIHKKYQASRILASEIRSNF--PKRHFLIPISYKGKFKRRPRE--FPTAYD 266
Cdd:pfam12736   1 LPQV---VKVTSGIYGEGSVycLSKGDVLLIHGLKQAKKVVAQEVEEGRgvVGPKLLIPLSYPGLFKLLADEgpFESVEE 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 784640339  267 LqiAKSRKETLHVVATKAFHTLH------KELS----PVSVGDQFL---VHHSETTEVVFEGTRKVNVLTCEKvlNKTRE 333
Cdd:pfam12736  78 L--ARSFPIRVLAKEEGPDSVGVpmfrssDDMSlanfTLQAGEELTllgVEESSGGKEELASVTVGDYLICLV--NQTGE 153
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 784640339  334 DAQLPLYMEGGFVEVIHDKKQYQISELCTQFCWPFNVKVAVRDLSIKDDIlAATPGLQLEEDITDSYLLISDFANPEECW 413
Cdd:pfam12736 154 SVLLPLSCRGRFSEECEDEGEYTLREIVEKFKLPLNVKVVVGDPPRGDLD-AFTGELRLEPVYEEQAVVASPLLIPVPFR 232
                         250       260
                  ....*....|....*....|...
gi 784640339  414 EIPMS-RLNMTVRLVNGSSLPAD 435
Cdd:pfam12736 233 KLEVPiPSDLDVEVAEVTSADNK 255
 
Name Accession Description Interval E-value
CABIT pfam12736
Cell-cycle sustaining, positive selection,; The 'CABIT' domain (for 'cysteine-containing, all- ...
1-177 2.37e-43

Cell-cycle sustaining, positive selection,; The 'CABIT' domain (for 'cysteine-containing, all- in Themis') is found in a newly identified gene family that has three mammalian homologs (Themis, Icb1 and 9130404H23Rik) that encode proteins with two CABIT domains and a highly conserved proline-rich region. In contrast, Fam59A, Fam59B and related proteins from mammals to cnidarians, including the insect Serrano proteins, have a single copy of the CABIT domain, a proline-rich region and often a C-terminal SAM (sterile-motif) domain. Multiple-sequence alignment has predicted that the CABIT domain adopts an all-strand structure with at least 12 strands, ie a dyad of six-stranded beta-barrel units. The CABIT domain contains a nearly absolutely conserved cysteine residue which is likely to be central to its function. CABIT domain proteins function downstream of tyrosine kinase signalling and interact with GRB2.


Pssm-ID: 463686  Cd Length: 261  Bit Score: 154.53  E-value: 2.37e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 784640339    1 MADKTPYLSIEEITRTVNI-------GPSRLGHPCFYHLKDIKLENLIIKQGEPIRFNSVEEINGET----------LVN 63
Cdd:pfam12736  66 LADEGPFESVEELARSFPIrvlakeeGPDSVGVPMFRSSDDMSLANFTLQAGEELTLLGVEESSGGKeelasvtvgdYLI 145
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 784640339   64 CgvVRNHQSHSFTLPLSQEGEFYE-CEDEHIYTLKEIVE-WKIPKNRTRTVKLTDFSNKwdstnpfpEDFYGTLILKPVY 141
Cdd:pfam12736 146 C--LVNQTGESVLLPLSCRGRFSEeCEDEGEYTLREIVEkFKLPLNVKVVVGDPPRGDL--------DAFTGELRLEPVY 215
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*.
gi 784640339  142 EIQGVLK--------FQKDIVRILPSLDVEVKDIT--DSYDANWFL 177
Cdd:pfam12736 216 EEQAVVAspllipvpFRKLEVPIPSDLDVEVAEVTsaDNKDYEEFL 261
CABIT pfam12736
Cell-cycle sustaining, positive selection,; The 'CABIT' domain (for 'cysteine-containing, all- ...
193-435 5.41e-36

Cell-cycle sustaining, positive selection,; The 'CABIT' domain (for 'cysteine-containing, all- in Themis') is found in a newly identified gene family that has three mammalian homologs (Themis, Icb1 and 9130404H23Rik) that encode proteins with two CABIT domains and a highly conserved proline-rich region. In contrast, Fam59A, Fam59B and related proteins from mammals to cnidarians, including the insect Serrano proteins, have a single copy of the CABIT domain, a proline-rich region and often a C-terminal SAM (sterile-motif) domain. Multiple-sequence alignment has predicted that the CABIT domain adopts an all-strand structure with at least 12 strands, ie a dyad of six-stranded beta-barrel units. The CABIT domain contains a nearly absolutely conserved cysteine residue which is likely to be central to its function. CABIT domain proteins function downstream of tyrosine kinase signalling and interact with GRB2.


Pssm-ID: 463686  Cd Length: 261  Bit Score: 134.50  E-value: 5.41e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 784640339  193 FPVVaevVEISQGNHLPQSI--LQREKTIVIHKKYQASRILASEIRSNF--PKRHFLIPISYKGKFKRRPRE--FPTAYD 266
Cdd:pfam12736   1 LPQV---VKVTSGIYGEGSVycLSKGDVLLIHGLKQAKKVVAQEVEEGRgvVGPKLLIPLSYPGLFKLLADEgpFESVEE 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 784640339  267 LqiAKSRKETLHVVATKAFHTLH------KELS----PVSVGDQFL---VHHSETTEVVFEGTRKVNVLTCEKvlNKTRE 333
Cdd:pfam12736  78 L--ARSFPIRVLAKEEGPDSVGVpmfrssDDMSlanfTLQAGEELTllgVEESSGGKEELASVTVGDYLICLV--NQTGE 153
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 784640339  334 DAQLPLYMEGGFVEVIHDKKQYQISELCTQFCWPFNVKVAVRDLSIKDDIlAATPGLQLEEDITDSYLLISDFANPEECW 413
Cdd:pfam12736 154 SVLLPLSCRGRFSEECEDEGEYTLREIVEKFKLPLNVKVVVGDPPRGDLD-AFTGELRLEPVYEEQAVVASPLLIPVPFR 232
                         250       260
                  ....*....|....*....|...
gi 784640339  414 EIPMS-RLNMTVRLVNGSSLPAD 435
Cdd:pfam12736 233 KLEVPiPSDLDVEVAEVTSADNK 255
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH