cytochrome c oxidase subunit 6B2 isoform 3 [Mus musculus]
Protein Classification
cytochrome c oxidase subunit 6B family protein( domain architecture ID 7495)
cytochrome c oxidase subunit 6B family protein similar to cytochrome c oxidase subunit 6B (also known as subunit VIb), which is a component of cytochrome c oxidase, the terminal oxidase in the respiratory chains of eukaryotes and most bacteria which catalyzes the reduction of O2 and simultaneously pumps protons across the membrane; subunit 6B may bind heme
List of domain hits
| Name | Accession | Description | Interval | E-value | ||
| Cyt_c_Oxidase_VIb super family | cl02794 | Cytochrome c oxidase subunit VIb. Cytochrome c oxidase (CcO), the terminal oxidase in the ... |
15-48 | 1.42e-14 | ||
Cytochrome c oxidase subunit VIb. Cytochrome c oxidase (CcO), the terminal oxidase in the respiratory chains of eukaryotes and most bacteria, is a multi-chain transmembrane protein located in the inner membrane of mitochondria and the cell membrane of prokaryotes. It catalyzes the reduction of O2 and simultaneously pumps protons across the membrane. The number of subunits varies from three to five in bacteria and up to 13 in mammalian mitochondria. Subunits I, II, and III of mammalian CcO are encoded within the mitochondrial genome and the remaining 10 subunits are encoded within the nuclear genome. Found only in eukaryotes, subunit VIb is one of three mammalian subunits that lacks a transmembrane region. It is located on the cytosolic side of the membrane and helps form the dimer interface with the corresponding subunit on the other monomer complex. The actual alignment was detected with superfamily member cd00926: Pssm-ID: 445926 Cd Length: 75 Bit Score: 61.17 E-value: 1.42e-14
|
||||||
| Name | Accession | Description | Interval | E-value | ||
| Cyt_c_Oxidase_VIb | cd00926 | Cytochrome c oxidase subunit VIb. Cytochrome c oxidase (CcO), the terminal oxidase in the ... |
15-48 | 1.42e-14 | ||
Cytochrome c oxidase subunit VIb. Cytochrome c oxidase (CcO), the terminal oxidase in the respiratory chains of eukaryotes and most bacteria, is a multi-chain transmembrane protein located in the inner membrane of mitochondria and the cell membrane of prokaryotes. It catalyzes the reduction of O2 and simultaneously pumps protons across the membrane. The number of subunits varies from three to five in bacteria and up to 13 in mammalian mitochondria. Subunits I, II, and III of mammalian CcO are encoded within the mitochondrial genome and the remaining 10 subunits are encoded within the nuclear genome. Found only in eukaryotes, subunit VIb is one of three mammalian subunits that lacks a transmembrane region. It is located on the cytosolic side of the membrane and helps form the dimer interface with the corresponding subunit on the other monomer complex. Pssm-ID: 238466 Cd Length: 75 Bit Score: 61.17 E-value: 1.42e-14
|
||||||
| COX6B | pfam02297 | Cytochrome oxidase c subunit VIb; Cytochrome c oxidase, a 13 sub-unit complex, EC:1.9.3.1 is ... |
21-56 | 6.73e-10 | ||
Cytochrome oxidase c subunit VIb; Cytochrome c oxidase, a 13 sub-unit complex, EC:1.9.3.1 is the terminal oxidase in the mitochondrial electron transport chain. This family is composed of the potentially heme-binding subunit IVb of the oxidase. Pssm-ID: 426708 Cd Length: 65 Bit Score: 48.89 E-value: 6.73e-10
|
||||||
| Name | Accession | Description | Interval | E-value | ||
| Cyt_c_Oxidase_VIb | cd00926 | Cytochrome c oxidase subunit VIb. Cytochrome c oxidase (CcO), the terminal oxidase in the ... |
15-48 | 1.42e-14 | ||
Cytochrome c oxidase subunit VIb. Cytochrome c oxidase (CcO), the terminal oxidase in the respiratory chains of eukaryotes and most bacteria, is a multi-chain transmembrane protein located in the inner membrane of mitochondria and the cell membrane of prokaryotes. It catalyzes the reduction of O2 and simultaneously pumps protons across the membrane. The number of subunits varies from three to five in bacteria and up to 13 in mammalian mitochondria. Subunits I, II, and III of mammalian CcO are encoded within the mitochondrial genome and the remaining 10 subunits are encoded within the nuclear genome. Found only in eukaryotes, subunit VIb is one of three mammalian subunits that lacks a transmembrane region. It is located on the cytosolic side of the membrane and helps form the dimer interface with the corresponding subunit on the other monomer complex. Pssm-ID: 238466 Cd Length: 75 Bit Score: 61.17 E-value: 1.42e-14
|
||||||
| COX6B | pfam02297 | Cytochrome oxidase c subunit VIb; Cytochrome c oxidase, a 13 sub-unit complex, EC:1.9.3.1 is ... |
21-56 | 6.73e-10 | ||
Cytochrome oxidase c subunit VIb; Cytochrome c oxidase, a 13 sub-unit complex, EC:1.9.3.1 is the terminal oxidase in the mitochondrial electron transport chain. This family is composed of the potentially heme-binding subunit IVb of the oxidase. Pssm-ID: 426708 Cd Length: 65 Bit Score: 48.89 E-value: 6.73e-10
|
||||||
| Blast search parameters | ||||
|
