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Conserved domains on  [gi|557948029|ref|NP_001273712|]
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protein-L-isoaspartate O-methyltransferase domain-containing protein 1 isoform 3 [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Pcm super family cl30240
Protein-L-isoaspartate O-methyltransferase [Posttranslational modification, protein turnover, ...
 5-44 7.20e-05

Protein-L-isoaspartate O-methyltransferase [Posttranslational modification, protein turnover, chaperones];


The actual alignment was detected with superfamily member COG2518:

Pssm-ID: 442008 [Multi-domain]  Cd Length: 197  Bit Score: 41.61  E-value: 7.20e-05
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....
gi 557948029   5 LKVGGILVMPIED----QLTQIMRTGqNTWESKNILAVSFAPLV 44
Cdd:COG2518  153 LAPGGRLVAPVGEggvqRLVLITRTG-DGFERESLFEVRFVPLR 195
 
Name Accession Description Interval E-value
Pcm COG2518
Protein-L-isoaspartate O-methyltransferase [Posttranslational modification, protein turnover, ...
 5-44 7.20e-05

Protein-L-isoaspartate O-methyltransferase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 442008 [Multi-domain]  Cd Length: 197  Bit Score: 41.61  E-value: 7.20e-05
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....
gi 557948029   5 LKVGGILVMPIED----QLTQIMRTGqNTWESKNILAVSFAPLV 44
Cdd:COG2518  153 LAPGGRLVAPVGEggvqRLVLITRTG-DGFERESLFEVRFVPLR 195
 
Name Accession Description Interval E-value
Pcm COG2518
Protein-L-isoaspartate O-methyltransferase [Posttranslational modification, protein turnover, ...
 5-44 7.20e-05

Protein-L-isoaspartate O-methyltransferase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 442008 [Multi-domain]  Cd Length: 197  Bit Score: 41.61  E-value: 7.20e-05
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....
gi 557948029   5 LKVGGILVMPIED----QLTQIMRTGqNTWESKNILAVSFAPLV 44
Cdd:COG2518  153 LAPGGRLVAPVGEggvqRLVLITRTG-DGFERESLFEVRFVPLR 195
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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