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Conserved domains on  [gi|485050360|ref|NP_001264860|]
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feather keratin 1-like [Gallus gallus]

Protein Classification

keratin( domain architecture ID 10493429)

keratin is a fibrous structural protein making up hair, nails, horns, claws, hooves, and the outer layer of animal skin

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Keratin pfam02422
Keratin; This family represents avian keratin proteins, found in feathers, scale and claw.
 3-77 2.14e-32

Keratin; This family represents avian keratin proteins, found in feathers, scale and claw.


:

Pssm-ID: 460553  Cd Length: 81  Bit Score: 107.91  E-value: 2.14e-32
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 485050360   3 CFDLCRP----CGPTPLANSCNEPCVRQCQDSRVVIEPSPVVVTLPGPILSSFPQNTAVGSSASAAVGNILSAEGVPIS 77
Cdd:pfam02422  1 CYDLCPPccgvAGPQPLANSCNEPCVRQCPDSTVVIQPPPVVVTFPGPILSSFPQNSVVGSSGSAAVGGSLGYGGVYGS 79
 
Name Accession Description Interval E-value
Keratin pfam02422
Keratin; This family represents avian keratin proteins, found in feathers, scale and claw.
 3-77 2.14e-32

Keratin; This family represents avian keratin proteins, found in feathers, scale and claw.


Pssm-ID: 460553  Cd Length: 81  Bit Score: 107.91  E-value: 2.14e-32
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 485050360   3 CFDLCRP----CGPTPLANSCNEPCVRQCQDSRVVIEPSPVVVTLPGPILSSFPQNTAVGSSASAAVGNILSAEGVPIS 77
Cdd:pfam02422  1 CYDLCPPccgvAGPQPLANSCNEPCVRQCPDSTVVIQPPPVVVTFPGPILSSFPQNSVVGSSGSAAVGGSLGYGGVYGS 79
 
Name Accession Description Interval E-value
Keratin pfam02422
Keratin; This family represents avian keratin proteins, found in feathers, scale and claw.
 3-77 2.14e-32

Keratin; This family represents avian keratin proteins, found in feathers, scale and claw.


Pssm-ID: 460553  Cd Length: 81  Bit Score: 107.91  E-value: 2.14e-32
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 485050360   3 CFDLCRP----CGPTPLANSCNEPCVRQCQDSRVVIEPSPVVVTLPGPILSSFPQNTAVGSSASAAVGNILSAEGVPIS 77
Cdd:pfam02422  1 CYDLCPPccgvAGPQPLANSCNEPCVRQCPDSTVVIQPPPVVVTFPGPILSSFPQNSVVGSSGSAAVGGSLGYGGVYGS 79
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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