uncharacterized protein Dmel_CG31550, isoform D [Drosophila melanogaster]
Protein Classification
G patch domain-containing protein( domain architecture ID 10481954)
G patch domain-containing protein similar to Saccharomyces cerevisiae protein PXR1 that is involved in rRNA-processing at A0, A1 and A2 sites through its action in U18 and U24 snoRNA 3'-end final trimming, and pre-mRNA-splicing factor SPP382 that is involved in pre-mRNA splicing and spliceosome disassembly
List of domain hits
| Name | Accession | Description | Interval | E-value | ||
| G-patch | pfam01585 | G-patch domain; This domain is found in a number of RNA binding proteins, and is also found in ... |
753-795 | 1.71e-12 | ||
G-patch domain; This domain is found in a number of RNA binding proteins, and is also found in proteins that contain RNA binding domains. This suggests that this domain may have an RNA binding function. This domain has seven highly conserved glycines. : Pssm-ID: 396249 [Multi-domain] Cd Length: 45 Bit Score: 62.53 E-value: 1.71e-12
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| Name | Accession | Description | Interval | E-value | ||
| G-patch | pfam01585 | G-patch domain; This domain is found in a number of RNA binding proteins, and is also found in ... |
753-795 | 1.71e-12 | ||
G-patch domain; This domain is found in a number of RNA binding proteins, and is also found in proteins that contain RNA binding domains. This suggests that this domain may have an RNA binding function. This domain has seven highly conserved glycines. Pssm-ID: 396249 [Multi-domain] Cd Length: 45 Bit Score: 62.53 E-value: 1.71e-12
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| G_patch | smart00443 | glycine rich nucleic binding domain; A predicted glycine rich nucleic binding domain found in ... |
750-797 | 1.84e-11 | ||
glycine rich nucleic binding domain; A predicted glycine rich nucleic binding domain found in the splicing factor 45, SON DNA binding protein and D-type Retrovirus- polyproteins. Pssm-ID: 197727 [Multi-domain] Cd Length: 47 Bit Score: 59.48 E-value: 1.84e-11
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| Name | Accession | Description | Interval | E-value | ||
| G-patch | pfam01585 | G-patch domain; This domain is found in a number of RNA binding proteins, and is also found in ... |
753-795 | 1.71e-12 | ||
G-patch domain; This domain is found in a number of RNA binding proteins, and is also found in proteins that contain RNA binding domains. This suggests that this domain may have an RNA binding function. This domain has seven highly conserved glycines. Pssm-ID: 396249 [Multi-domain] Cd Length: 45 Bit Score: 62.53 E-value: 1.71e-12
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| G_patch | smart00443 | glycine rich nucleic binding domain; A predicted glycine rich nucleic binding domain found in ... |
750-797 | 1.84e-11 | ||
glycine rich nucleic binding domain; A predicted glycine rich nucleic binding domain found in the splicing factor 45, SON DNA binding protein and D-type Retrovirus- polyproteins. Pssm-ID: 197727 [Multi-domain] Cd Length: 47 Bit Score: 59.48 E-value: 1.84e-11
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| G-patch_2 | pfam12656 | G-patch domain; Yeast Spp2, a G-patch protein and spliceosome component, interacts with the ... |
740-796 | 2.66e-04 | ||
G-patch domain; Yeast Spp2, a G-patch protein and spliceosome component, interacts with the ATP-dependent DExH-box splicing factor Prp2. As this interaction involves the G-patch sequence in Spp2 and is required for the recruitment of Prp2 to the spliceosome before the first catalytic step of splicing, it is proposed that Spp2 might be an accessory factor that confers spliceosome specificity on Prp2. Pssm-ID: 432700 [Multi-domain] Cd Length: 61 Bit Score: 39.57 E-value: 2.66e-04
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