DUF148 domain-containing protein [Caenorhabditis elegans]
DUF4473 domain-containing protein( domain architecture ID 10631710)
DUF4473 domain-containing protein
List of domain hits
Name | Accession | Description | Interval | E-value | ||
DUF4473 | pfam14747 | Domain of unknown function (DUF4473); This short family is largely confined to Caenorhabditis ... |
23-99 | 8.98e-26 | ||
Domain of unknown function (DUF4473); This short family is largely confined to Caenorhabditis proteins. The function is not known. There are two well-conserved aspartate residues. : Pssm-ID: 373266 Cd Length: 78 Bit Score: 91.13 E-value: 8.98e-26
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Name | Accession | Description | Interval | E-value | ||
DUF4473 | pfam14747 | Domain of unknown function (DUF4473); This short family is largely confined to Caenorhabditis ... |
23-99 | 8.98e-26 | ||
Domain of unknown function (DUF4473); This short family is largely confined to Caenorhabditis proteins. The function is not known. There are two well-conserved aspartate residues. Pssm-ID: 373266 Cd Length: 78 Bit Score: 91.13 E-value: 8.98e-26
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HMG-box_UBF1_rpt6-like | cd22003 | sixth high mobility group (HMG)-box found in upstream-binding factor 1 (UBF1) and similar ... |
63-96 | 6.77e-03 | ||
sixth high mobility group (HMG)-box found in upstream-binding factor 1 (UBF1) and similar proteins; UBF1, also called UBTF, nucleolar transcription factor 1, or auto-antigen NOR-90, is a nucleolar transcription factor that recognizes the ribosomal RNA gene promoter and activates transcription mediated by RNA polymerase I through cooperative interactions with the transcription factor SL1/TIF-IB complex. It binds specifically to the upstream control element. UBF1 contains six HMG-box domains. This model corresponds to the sixth one. This model also includes the second HMG-box domain of upstream-binding factor 1-like protein 1 (UBTFL1), which contains two HMG-box domains. Pssm-ID: 438819 [Multi-domain] Cd Length: 86 Bit Score: 33.04 E-value: 6.77e-03
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Name | Accession | Description | Interval | E-value | ||
DUF4473 | pfam14747 | Domain of unknown function (DUF4473); This short family is largely confined to Caenorhabditis ... |
23-99 | 8.98e-26 | ||
Domain of unknown function (DUF4473); This short family is largely confined to Caenorhabditis proteins. The function is not known. There are two well-conserved aspartate residues. Pssm-ID: 373266 Cd Length: 78 Bit Score: 91.13 E-value: 8.98e-26
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HMG-box_UBF1_rpt6-like | cd22003 | sixth high mobility group (HMG)-box found in upstream-binding factor 1 (UBF1) and similar ... |
63-96 | 6.77e-03 | ||
sixth high mobility group (HMG)-box found in upstream-binding factor 1 (UBF1) and similar proteins; UBF1, also called UBTF, nucleolar transcription factor 1, or auto-antigen NOR-90, is a nucleolar transcription factor that recognizes the ribosomal RNA gene promoter and activates transcription mediated by RNA polymerase I through cooperative interactions with the transcription factor SL1/TIF-IB complex. It binds specifically to the upstream control element. UBF1 contains six HMG-box domains. This model corresponds to the sixth one. This model also includes the second HMG-box domain of upstream-binding factor 1-like protein 1 (UBTFL1), which contains two HMG-box domains. Pssm-ID: 438819 [Multi-domain] Cd Length: 86 Bit Score: 33.04 E-value: 6.77e-03
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Blast search parameters | ||||
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