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Conserved domains on  [gi|392901593|ref|NP_001255748|]
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DUF547 domain-containing protein [Caenorhabditis elegans]

Protein Classification

DUF547 domain-containing protein( domain architecture ID 10521530)

DUF547 domain-containing protein may also contain a partial Leucine-zipper MIP1 domain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF547 pfam04784
Protein of unknown function, DUF547; Family of uncharacterized proteins from C. elegans and A. ...
 93-212 2.37e-39

Protein of unknown function, DUF547; Family of uncharacterized proteins from C. elegans and A. thaliana.


:

Pssm-ID: 461427  Cd Length: 119  Bit Score: 134.63  E-value: 2.37e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392901593   93 DDRLTFFINVYNMMLIHITLKHGPPIGIWQRRKLVNGTYYLIGGHRYALHSIINGILRGNkkgPGMLWKAFGkqDARLPI 172
Cdd:pfam04784   2 EEKLAFWINLYNALTIHAILYPGIPPSPWKRRSLFDKAAYNIGGHKYSLDDIEHGILRGN---PSNLKKPFG--DPRRKY 76

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|
gi 392901593  173 SLAVCDPLIYFSLCSGSKTTPPLRVYHSKSIHQEMRENAR 212
Cdd:pfam04784  77 ALEYPDPRIHFALNCGSKSCPPLRAYTAENLEEQLEEAAR 116
 
Name Accession Description Interval E-value
DUF547 pfam04784
Protein of unknown function, DUF547; Family of uncharacterized proteins from C. elegans and A. ...
 93-212 2.37e-39

Protein of unknown function, DUF547; Family of uncharacterized proteins from C. elegans and A. thaliana.


Pssm-ID: 461427  Cd Length: 119  Bit Score: 134.63  E-value: 2.37e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392901593   93 DDRLTFFINVYNMMLIHITLKHGPPIGIWQRRKLVNGTYYLIGGHRYALHSIINGILRGNkkgPGMLWKAFGkqDARLPI 172
Cdd:pfam04784   2 EEKLAFWINLYNALTIHAILYPGIPPSPWKRRSLFDKAAYNIGGHKYSLDDIEHGILRGN---PSNLKKPFG--DPRRKY 76

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|
gi 392901593  173 SLAVCDPLIYFSLCSGSKTTPPLRVYHSKSIHQEMRENAR 212
Cdd:pfam04784  77 ALEYPDPRIHFALNCGSKSCPPLRAYTAENLEEQLEEAAR 116
 
Name Accession Description Interval E-value
DUF547 pfam04784
Protein of unknown function, DUF547; Family of uncharacterized proteins from C. elegans and A. ...
 93-212 2.37e-39

Protein of unknown function, DUF547; Family of uncharacterized proteins from C. elegans and A. thaliana.


Pssm-ID: 461427  Cd Length: 119  Bit Score: 134.63  E-value: 2.37e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392901593   93 DDRLTFFINVYNMMLIHITLKHGPPIGIWQRRKLVNGTYYLIGGHRYALHSIINGILRGNkkgPGMLWKAFGkqDARLPI 172
Cdd:pfam04784   2 EEKLAFWINLYNALTIHAILYPGIPPSPWKRRSLFDKAAYNIGGHKYSLDDIEHGILRGN---PSNLKKPFG--DPRRKY 76

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|
gi 392901593  173 SLAVCDPLIYFSLCSGSKTTPPLRVYHSKSIHQEMRENAR 212
Cdd:pfam04784  77 ALEYPDPRIHFALNCGSKSCPPLRAYTAENLEEQLEEAAR 116
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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