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Conserved domains on  [gi|391224478|ref|NP_001254646|]
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neuronal regeneration-related protein [Mus musculus]

Protein Classification

Alveol-reg_P311 domain-containing protein( domain architecture ID 10567447)

Alveol-reg_P311 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Alveol-reg_P311 pfam11092
Neuronal protein 3.1 (p311); P311 has several PEST-like motifs and is found in neuron and ...
 2-68 2.83e-33

Neuronal protein 3.1 (p311); P311 has several PEST-like motifs and is found in neuron and muscle cells. P311 could have some function in myo-fibroblast transformation and prevention of fibrosis. It has also been identified as a potential regulator of alveolar generation.


:

Pssm-ID: 463218  Cd Length: 67  Bit Score: 108.34  E-value: 2.83e-33
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 391224478   2 VYYPELLVWVSQEPFAYKEMEGGLIKGRLPVPKEVNRKKMEETGAASLTPPGSREFTSPATSYLHPF 68
Cdd:pfam11092  1 VYQPELTVWVSQKPFPTSQGDGRFPKGNLPVPKEVNRKKMDETEAASLTPPGGDGLHATGINYLYSF 67
 
Name Accession Description Interval E-value
Alveol-reg_P311 pfam11092
Neuronal protein 3.1 (p311); P311 has several PEST-like motifs and is found in neuron and ...
 2-68 2.83e-33

Neuronal protein 3.1 (p311); P311 has several PEST-like motifs and is found in neuron and muscle cells. P311 could have some function in myo-fibroblast transformation and prevention of fibrosis. It has also been identified as a potential regulator of alveolar generation.


Pssm-ID: 463218  Cd Length: 67  Bit Score: 108.34  E-value: 2.83e-33
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 391224478   2 VYYPELLVWVSQEPFAYKEMEGGLIKGRLPVPKEVNRKKMEETGAASLTPPGSREFTSPATSYLHPF 68
Cdd:pfam11092  1 VYQPELTVWVSQKPFPTSQGDGRFPKGNLPVPKEVNRKKMDETEAASLTPPGGDGLHATGINYLYSF 67
 
Name Accession Description Interval E-value
Alveol-reg_P311 pfam11092
Neuronal protein 3.1 (p311); P311 has several PEST-like motifs and is found in neuron and ...
 2-68 2.83e-33

Neuronal protein 3.1 (p311); P311 has several PEST-like motifs and is found in neuron and muscle cells. P311 could have some function in myo-fibroblast transformation and prevention of fibrosis. It has also been identified as a potential regulator of alveolar generation.


Pssm-ID: 463218  Cd Length: 67  Bit Score: 108.34  E-value: 2.83e-33
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 391224478   2 VYYPELLVWVSQEPFAYKEMEGGLIKGRLPVPKEVNRKKMEETGAASLTPPGSREFTSPATSYLHPF 68
Cdd:pfam11092  1 VYQPELTVWVSQKPFPTSQGDGRFPKGNLPVPKEVNRKKMDETEAASLTPPGGDGLHATGINYLYSF 67
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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