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Conserved domains on  [gi|388454605|ref|NP_001253379|]
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plakophilin-4 [Macaca mulatta]

Protein Classification

armadillo/beta-catenin-like repeat-containing protein( domain architecture ID 11997863)

armadillo/beta-catenin-like repeat-containing protein similar to catenin delta and plakophilin

CATH:  1.25.10.10
Gene Ontology:  GO:0098609|GO:0005515
PubMed:  12946625|9770300|9298899|20688255
SCOP:  3000116

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 559-598 1.78e-09

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


:

Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 54.00  E-value: 1.78e-09
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|
gi 388454605   559 DNKVKMEVCRLGGIKHLVDLLDHRVLEVQKNACGALRNLV 598
Cdd:pfam00514    1 SPENKQAVIEAGAVPPLVRLLSSPDEEVQEEAAWALSNLA 40
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 603-644 5.21e-07

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


:

Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 47.04  E-value: 5.21e-07
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|..
gi 388454605    603 TDENKIAMKNVGGIPALLRLLRKSiDAEVRELVTGVLWNLSS 644
Cdd:smart00185    1 DDENKQAVVDAGGLPALVELLKSE-DEEVVKEAAWALSNLSS 41
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 865-900 5.31e-07

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


:

Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 47.04  E-value: 5.31e-07
                            10        20        30
                    ....*....|....*....|....*....|....*.
gi 388454605    865 RAAVRKEKGLPILVELLRMDNDRVVSSVATALRNMA 900
Cdd:smart00185    5 KQAVVDAGGLPALVELLKSEDEEVVKEAAWALSNLS 40
PLN03200 super family cl33659
cellulose synthase-interactive protein; Provisional
 848-969 2.84e-04

cellulose synthase-interactive protein; Provisional


The actual alignment was detected with superfamily member PLN03200:

Pssm-ID: 215629 [Multi-domain]  Cd Length: 2102  Bit Score: 45.48  E-value: 2.84e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 388454605  848 GSLQNLSA---GNWkfAAYIRAAvrkekGLPILVELLRMDNDRVVSSVATALRNMAL---DVRNKeLIGKYAMRDLVNRL 921
Cdd:PLN03200  169 GALRNLCGstdGFW--SATLEAG-----GVDILVKLLSSGNSDAQANAASLLARLMMafeSSISK-VLDAGAVKQLLKLL 240

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 388454605  922 PGGNGPSVlsdetMAAICCALHEVTSKNMENAKALADSGGIEKLVNIT 969
Cdd:PLN03200  241 GQGNEVSV-----RAEAAGALEALSSQSKEAKQAIADAGGIPALINAT 283
PHA03247 super family cl33720
large tegument protein UL36; Provisional
 194-347 3.45e-04

large tegument protein UL36; Provisional


The actual alignment was detected with superfamily member PHA03247:

Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 45.31  E-value: 3.45e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 388454605  194 AEGQTLVQPSVANRAMRRVSSVPSRAQSPSyvistGVSPSRGSLRTSLGSGFGSPSVTDPRPLNPSAYSSTTLP------ 267
Cdd:PHA03247 2596 ARPRAPVDDRGDPRGPAPPSPLPPDTHAPD-----PPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPrrarrl 2670

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 388454605  268 --AVRAASPySQRPASPTAIRRIGSVTSRQTSNPNGPTPQYQTTARV-GSPLTLTDAQTRVASPSQGQVGSSSPKRSGmT 344
Cdd:PHA03247 2671 grAAQASSP-PQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVsATPLPPGPAAARQASPALPAAPAPPAVPAG-P 2748


                  ...
gi 388454605  345 AVP 347
Cdd:PHA03247 2749 ATP 2751
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 949-993 4.26e-03

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


:

Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 36.25  E-value: 4.26e-03
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*
gi 388454605    949 NMENAKALADSGGIEKLVNITKgrgdRSSLKVVKAAAQVLNTLWQ 993
Cdd:smart00185    1 DDENKQAVVDAGGLPALVELLK----SEDEEVVKEAAWALSNLSS 41
 
Name Accession Description Interval E-value
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 559-598 1.78e-09

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 54.00  E-value: 1.78e-09
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|
gi 388454605   559 DNKVKMEVCRLGGIKHLVDLLDHRVLEVQKNACGALRNLV 598
Cdd:pfam00514    1 SPENKQAVIEAGAVPPLVRLLSSPDEEVQEEAAWALSNLA 40
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 559-599 3.53e-09

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 53.20  E-value: 3.53e-09
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|.
gi 388454605    559 DNKVKMEVCRLGGIKHLVDLLDHRVLEVQKNACGALRNLVF 599
Cdd:smart00185    1 DDENKQAVVDAGGLPALVELLKSEDEEVVKEAAWALSNLSS 41
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 603-644 5.21e-07

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 47.04  E-value: 5.21e-07
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|..
gi 388454605    603 TDENKIAMKNVGGIPALLRLLRKSiDAEVRELVTGVLWNLSS 644
Cdd:smart00185    1 DDENKQAVVDAGGLPALVELLKSE-DEEVVKEAAWALSNLSS 41
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 865-900 5.31e-07

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 47.04  E-value: 5.31e-07
                            10        20        30
                    ....*....|....*....|....*....|....*.
gi 388454605    865 RAAVRKEKGLPILVELLRMDNDRVVSSVATALRNMA 900
Cdd:smart00185    5 KQAVVDAGGLPALVELLKSEDEEVVKEAAWALSNLS 40
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 603-644 2.14e-06

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 45.52  E-value: 2.14e-06
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 388454605   603 TDENKIAMKNVGGIPALLRLLrKSIDAEVRELVTGVLWNLSS 644
Cdd:pfam00514    1 SPENKQAVIEAGAVPPLVRLL-SSPDEEVQEEAAWALSNLAA 41
HEAT COG1413
HEAT repeat [General function prediction only];
526-648 1.99e-04

HEAT repeat [General function prediction only];


Pssm-ID: 441023 [Multi-domain]  Cd Length: 137  Bit Score: 42.69  E-value: 1.99e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 388454605  526 RDPE-LPEVIHMLQHQFPSVQANAAAYLQHLcfGDNKVkmevcrlggIKHLVDLLDHRVLEVQKNACGALRNLvfgkstd 604
Cdd:COG1413    13 GDPAaVPALIAALADEDPDVRAAAARALGRL--GDPRA---------VPALLEALKDPDPEVRAAAAEALGRI------- 74

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 388454605  605 enkiamKNVGGIPALLRLLrKSIDAEVRELVTGVLWNLSSCDAV 648
Cdd:COG1413    75 ------GDPEAVPALIAAL-KDEDPEVRRAAAEALGRLGDPAAV 111
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 865-900 2.56e-04

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 39.36  E-value: 2.56e-04
                           10        20        30
                   ....*....|....*....|....*....|....*.
gi 388454605   865 RAAVRKEKGLPILVELLRMDNDRVVSSVATALRNMA 900
Cdd:pfam00514    5 KQAVIEAGAVPPLVRLLSSPDEEVQEEAAWALSNLA 40
PLN03200 PLN03200
cellulose synthase-interactive protein; Provisional
 848-969 2.84e-04

cellulose synthase-interactive protein; Provisional


Pssm-ID: 215629 [Multi-domain]  Cd Length: 2102  Bit Score: 45.48  E-value: 2.84e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 388454605  848 GSLQNLSA---GNWkfAAYIRAAvrkekGLPILVELLRMDNDRVVSSVATALRNMAL---DVRNKeLIGKYAMRDLVNRL 921
Cdd:PLN03200  169 GALRNLCGstdGFW--SATLEAG-----GVDILVKLLSSGNSDAQANAASLLARLMMafeSSISK-VLDAGAVKQLLKLL 240

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 388454605  922 PGGNGPSVlsdetMAAICCALHEVTSKNMENAKALADSGGIEKLVNIT 969
Cdd:PLN03200  241 GQGNEVSV-----RAEAAGALEALSSQSKEAKQAIADAGGIPALINAT 283
PHA03247 PHA03247
large tegument protein UL36; Provisional
 194-347 3.45e-04

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 45.31  E-value: 3.45e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 388454605  194 AEGQTLVQPSVANRAMRRVSSVPSRAQSPSyvistGVSPSRGSLRTSLGSGFGSPSVTDPRPLNPSAYSSTTLP------ 267
Cdd:PHA03247 2596 ARPRAPVDDRGDPRGPAPPSPLPPDTHAPD-----PPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPrrarrl 2670

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 388454605  268 --AVRAASPySQRPASPTAIRRIGSVTSRQTSNPNGPTPQYQTTARV-GSPLTLTDAQTRVASPSQGQVGSSSPKRSGmT 344
Cdd:PHA03247 2671 grAAQASSP-PQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVsATPLPPGPAAARQASPALPAAPAPPAVPAG-P 2748


                  ...
gi 388454605  345 AVP 347
Cdd:PHA03247 2749 ATP 2751
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 949-993 4.26e-03

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 36.25  E-value: 4.26e-03
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*
gi 388454605    949 NMENAKALADSGGIEKLVNITKgrgdRSSLKVVKAAAQVLNTLWQ 993
Cdd:smart00185    1 DDENKQAVVDAGGLPALVELLK----SEDEEVVKEAAWALSNLSS 41
PLN03200 PLN03200
cellulose synthase-interactive protein; Provisional
 530-644 6.98e-03

cellulose synthase-interactive protein; Provisional


Pssm-ID: 215629 [Multi-domain]  Cd Length: 2102  Bit Score: 40.86  E-value: 6.98e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 388454605  530 LPEVIHMLQHQFPSVQANAAAYLQHLCfGDNKVKMEVCrLGG-IKHLVDLLDHRVLEVQKNACGALRNLVFGKSTDEnkI 608
Cdd:PLN03200   60 MPLLVSLLRSGTLGAKVNAAAVLGVLC-KEEDLRVKVL-LGGcIPPLLSLLKSGSAEAQKAAAEAIYAVSSGGLSDH--V 135

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 388454605  609 AMK---NVGGIPALLRLL--RKSIDAEVRELVTGVLWNLSS 644
Cdd:PLN03200  136 GSKifsTEGVVPSLWDQLqpGNKQDKVVEGLLTGALRNLCG 176
 
Name Accession Description Interval E-value
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 559-598 1.78e-09

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 54.00  E-value: 1.78e-09
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|
gi 388454605   559 DNKVKMEVCRLGGIKHLVDLLDHRVLEVQKNACGALRNLV 598
Cdd:pfam00514    1 SPENKQAVIEAGAVPPLVRLLSSPDEEVQEEAAWALSNLA 40
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 559-599 3.53e-09

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 53.20  E-value: 3.53e-09
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|.
gi 388454605    559 DNKVKMEVCRLGGIKHLVDLLDHRVLEVQKNACGALRNLVF 599
Cdd:smart00185    1 DDENKQAVVDAGGLPALVELLKSEDEEVVKEAAWALSNLSS 41
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 603-644 5.21e-07

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 47.04  E-value: 5.21e-07
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|..
gi 388454605    603 TDENKIAMKNVGGIPALLRLLRKSiDAEVRELVTGVLWNLSS 644
Cdd:smart00185    1 DDENKQAVVDAGGLPALVELLKSE-DEEVVKEAAWALSNLSS 41
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 865-900 5.31e-07

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 47.04  E-value: 5.31e-07
                            10        20        30
                    ....*....|....*....|....*....|....*.
gi 388454605    865 RAAVRKEKGLPILVELLRMDNDRVVSSVATALRNMA 900
Cdd:smart00185    5 KQAVVDAGGLPALVELLKSEDEEVVKEAAWALSNLS 40
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 603-644 2.14e-06

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 45.52  E-value: 2.14e-06
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 388454605   603 TDENKIAMKNVGGIPALLRLLrKSIDAEVRELVTGVLWNLSS 644
Cdd:pfam00514    1 SPENKQAVIEAGAVPPLVRLL-SSPDEEVQEEAAWALSNLAA 41
HEAT COG1413
HEAT repeat [General function prediction only];
526-648 1.99e-04

HEAT repeat [General function prediction only];


Pssm-ID: 441023 [Multi-domain]  Cd Length: 137  Bit Score: 42.69  E-value: 1.99e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 388454605  526 RDPE-LPEVIHMLQHQFPSVQANAAAYLQHLcfGDNKVkmevcrlggIKHLVDLLDHRVLEVQKNACGALRNLvfgkstd 604
Cdd:COG1413    13 GDPAaVPALIAALADEDPDVRAAAARALGRL--GDPRA---------VPALLEALKDPDPEVRAAAAEALGRI------- 74

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 388454605  605 enkiamKNVGGIPALLRLLrKSIDAEVRELVTGVLWNLSSCDAV 648
Cdd:COG1413    75 ------GDPEAVPALIAAL-KDEDPEVRRAAAEALGRLGDPAAV 111
Arm pfam00514
Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form ...
 865-900 2.56e-04

Armadillo/beta-catenin-like repeat; Approx. 40 amino acid repeat. Tandem repeats form super-helix of helices that is proposed to mediate interaction of beta-catenin with its ligands. CAUTION: This family does not contain all known armadillo repeats.


Pssm-ID: 425727 [Multi-domain]  Cd Length: 41  Bit Score: 39.36  E-value: 2.56e-04
                           10        20        30
                   ....*....|....*....|....*....|....*.
gi 388454605   865 RAAVRKEKGLPILVELLRMDNDRVVSSVATALRNMA 900
Cdd:pfam00514    5 KQAVIEAGAVPPLVRLLSSPDEEVQEEAAWALSNLA 40
PLN03200 PLN03200
cellulose synthase-interactive protein; Provisional
 848-969 2.84e-04

cellulose synthase-interactive protein; Provisional


Pssm-ID: 215629 [Multi-domain]  Cd Length: 2102  Bit Score: 45.48  E-value: 2.84e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 388454605  848 GSLQNLSA---GNWkfAAYIRAAvrkekGLPILVELLRMDNDRVVSSVATALRNMAL---DVRNKeLIGKYAMRDLVNRL 921
Cdd:PLN03200  169 GALRNLCGstdGFW--SATLEAG-----GVDILVKLLSSGNSDAQANAASLLARLMMafeSSISK-VLDAGAVKQLLKLL 240

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 388454605  922 PGGNGPSVlsdetMAAICCALHEVTSKNMENAKALADSGGIEKLVNIT 969
Cdd:PLN03200  241 GQGNEVSV-----RAEAAGALEALSSQSKEAKQAIADAGGIPALINAT 283
PHA03247 PHA03247
large tegument protein UL36; Provisional
 194-347 3.45e-04

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 45.31  E-value: 3.45e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 388454605  194 AEGQTLVQPSVANRAMRRVSSVPSRAQSPSyvistGVSPSRGSLRTSLGSGFGSPSVTDPRPLNPSAYSSTTLP------ 267
Cdd:PHA03247 2596 ARPRAPVDDRGDPRGPAPPSPLPPDTHAPD-----PPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPrrarrl 2670

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 388454605  268 --AVRAASPySQRPASPTAIRRIGSVTSRQTSNPNGPTPQYQTTARV-GSPLTLTDAQTRVASPSQGQVGSSSPKRSGmT 344
Cdd:PHA03247 2671 grAAQASSP-PQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVsATPLPPGPAAARQASPALPAAPAPPAVPAG-P 2748


                  ...
gi 388454605  345 AVP 347
Cdd:PHA03247 2749 ATP 2751
ARM smart00185
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ...
 949-993 4.26e-03

Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.


Pssm-ID: 214547 [Multi-domain]  Cd Length: 41  Bit Score: 36.25  E-value: 4.26e-03
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*
gi 388454605    949 NMENAKALADSGGIEKLVNITKgrgdRSSLKVVKAAAQVLNTLWQ 993
Cdd:smart00185    1 DDENKQAVVDAGGLPALVELLK----SEDEEVVKEAAWALSNLSS 41
PLN03200 PLN03200
cellulose synthase-interactive protein; Provisional
 530-644 6.98e-03

cellulose synthase-interactive protein; Provisional


Pssm-ID: 215629 [Multi-domain]  Cd Length: 2102  Bit Score: 40.86  E-value: 6.98e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 388454605  530 LPEVIHMLQHQFPSVQANAAAYLQHLCfGDNKVKMEVCrLGG-IKHLVDLLDHRVLEVQKNACGALRNLVFGKSTDEnkI 608
Cdd:PLN03200   60 MPLLVSLLRSGTLGAKVNAAAVLGVLC-KEEDLRVKVL-LGGcIPPLLSLLKSGSAEAQKAAAEAIYAVSSGGLSDH--V 135

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 388454605  609 AMK---NVGGIPALLRLL--RKSIDAEVRELVTGVLWNLSS 644
Cdd:PLN03200  136 GSKifsTEGVVPSLWDQLqpGNKQDKVVEGLLTGALRNLCG 176
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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