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Conserved domains on  [gi|392885140|ref|NP_001249366|]
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CaLponIn-liKe proteins [Caenorhabditis elegans]

Protein Classification

calponin repeat domain-containing protein( domain architecture ID 10449811)

calponin repeat domain-containing protein similar to Caenorhabditis elegans uncharacterized protein C53C9.2

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Calponin pfam00402
Calponin family repeat;
50-72 2.32e-07

Calponin family repeat;


:

Pssm-ID: 459803  Cd Length: 25  Bit Score: 43.28  E-value: 2.32e-07
                          10        20
                  ....*....|....*....|...
gi 392885140   50 LQSGTNQFDSQRGMTGFGTPRDV 72
Cdd:pfam00402   3 LQMGTNKGASQSGMTAFGAVRHI 25
MDMPI_N super family cl21506
Mycothiol maleylpyruvate isomerase N-terminal domain;
17-41 2.38e-03

Mycothiol maleylpyruvate isomerase N-terminal domain;


The actual alignment was detected with superfamily member PRK13291:

Pssm-ID: 473890  Cd Length: 173  Bit Score: 35.34  E-value: 2.38e-03
                         10        20
                 ....*....|....*....|....*
gi 392885140  17 AAVEVPSNEQLERRTRDGKWTLRQL 41
Cdd:PRK13291  38 AAVSGLSDEQLDTPYREGGWTVRQV 62
 
Name Accession Description Interval E-value
Calponin pfam00402
Calponin family repeat;
50-72 2.32e-07

Calponin family repeat;


Pssm-ID: 459803  Cd Length: 25  Bit Score: 43.28  E-value: 2.32e-07
                          10        20
                  ....*....|....*....|...
gi 392885140   50 LQSGTNQFDSQRGMTGFGTPRDV 72
Cdd:pfam00402   3 LQMGTNKGASQSGMTAFGAVRHI 25
PRK13291 PRK13291
putative metal-dependent hydrolase;
17-41 2.38e-03

putative metal-dependent hydrolase;


Pssm-ID: 183954  Cd Length: 173  Bit Score: 35.34  E-value: 2.38e-03
                         10        20
                 ....*....|....*....|....*
gi 392885140  17 AAVEVPSNEQLERRTRDGKWTLRQL 41
Cdd:PRK13291  38 AAVSGLSDEQLDTPYREGGWTVRQV 62
 
Name Accession Description Interval E-value
Calponin pfam00402
Calponin family repeat;
50-72 2.32e-07

Calponin family repeat;


Pssm-ID: 459803  Cd Length: 25  Bit Score: 43.28  E-value: 2.32e-07
                          10        20
                  ....*....|....*....|...
gi 392885140   50 LQSGTNQFDSQRGMTGFGTPRDV 72
Cdd:pfam00402   3 LQMGTNKGASQSGMTAFGAVRHI 25
PRK13291 PRK13291
putative metal-dependent hydrolase;
17-41 2.38e-03

putative metal-dependent hydrolase;


Pssm-ID: 183954  Cd Length: 173  Bit Score: 35.34  E-value: 2.38e-03
                         10        20
                 ....*....|....*....|....*
gi 392885140  17 AAVEVPSNEQLERRTRDGKWTLRQL 41
Cdd:PRK13291  38 AAVSGLSDEQLDTPYREGGWTVRQV 62
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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