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Conserved domains on  [gi|386765647|ref|NP_001247072|]
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uncharacterized protein Dmel_CG4702, isoform D [Drosophila melanogaster]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DM4_12 super family cl11657
DM4/DM12 family; This family contains sequences derived from hypothetical proteins expressed ...
 246-311 9.74e-04

DM4/DM12 family; This family contains sequences derived from hypothetical proteins expressed by two insect species, D. melanogaster and A. gambiae. The region in question is approximately 115 amino acid residues long and contains four highly- conserved cysteine residues.


The actual alignment was detected with superfamily member pfam07841:

Pssm-ID: 472236  Cd Length: 86  Bit Score: 37.66  E-value: 9.74e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 386765647  246 CTQRYMCDANTecVREIGGSSIFCQLgsyaTSYVLgRTSGSNFEEL------YDAGRRGRSGFDCRQIYLEC 311
Cdd:pfam07841  22 CLLRAICEAAQ--RPLPENNGLLGEL----LHILF-TPSSSEDEELddddeyLEAERAGRSGADCAQLYPEC 86
 
Name Accession Description Interval E-value
DM4_12 pfam07841
DM4/DM12 family; This family contains sequences derived from hypothetical proteins expressed ...
 246-311 9.74e-04

DM4/DM12 family; This family contains sequences derived from hypothetical proteins expressed by two insect species, D. melanogaster and A. gambiae. The region in question is approximately 115 amino acid residues long and contains four highly- conserved cysteine residues.


Pssm-ID: 462285  Cd Length: 86  Bit Score: 37.66  E-value: 9.74e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 386765647  246 CTQRYMCDANTecVREIGGSSIFCQLgsyaTSYVLgRTSGSNFEEL------YDAGRRGRSGFDCRQIYLEC 311
Cdd:pfam07841  22 CLLRAICEAAQ--RPLPENNGLLGEL----LHILF-TPSSSEDEELddddeyLEAERAGRSGADCAQLYPEC 86
 
Name Accession Description Interval E-value
DM4_12 pfam07841
DM4/DM12 family; This family contains sequences derived from hypothetical proteins expressed ...
 246-311 9.74e-04

DM4/DM12 family; This family contains sequences derived from hypothetical proteins expressed by two insect species, D. melanogaster and A. gambiae. The region in question is approximately 115 amino acid residues long and contains four highly- conserved cysteine residues.


Pssm-ID: 462285  Cd Length: 86  Bit Score: 37.66  E-value: 9.74e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 386765647  246 CTQRYMCDANTecVREIGGSSIFCQLgsyaTSYVLgRTSGSNFEEL------YDAGRRGRSGFDCRQIYLEC 311
Cdd:pfam07841  22 CLLRAICEAAQ--RPLPENNGLLGEL----LHILF-TPSSSEDEELddddeyLEAERAGRSGADCAQLYPEC 86
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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