|
Name |
Accession |
Description |
Interval |
E-value |
| BicD |
pfam09730 |
Microtubule-associated protein Bicaudal-D; BicD proteins consist of three coiled-coiled ... |
83-741 |
2.32e-123 |
|
Microtubule-associated protein Bicaudal-D; BicD proteins consist of three coiled-coiled domains and are involved in dynein-mediated minus end-directed transport from the Golgi apparatus to the endoplasmic reticulum (ER). For full functioning they bind with GSK-3beta pfam05350 to maintain the anchoring of microtubules to the centromere. It appears that amino-acid residues 437-617 of BicD and the kinase activity of GSK-3 are necessary for the formation of a complex between BicD and GSK-3beta in intact cells.
Pssm-ID: 462863 [Multi-domain] Cd Length: 717 Bit Score: 385.37 E-value: 2.32e-123
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 83 TSQKVTNKTGIEQEDALLNESAARETSLNLQIFDLENELKQLRHELERVRNERDRMLQENSDFGRDKSDSEADRLRLKSE 162
Cdd:pfam09730 5 SSHKKVAADGESREESLLQESASKEAYYAQRILELQNELKQARAVLSNTQAENERLASLSQELKEECECVELQRGRMRDE 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 163 LKDLKFRETRMLSEYSELEEENISLQKQVSSLRSSQVEFEGAKHEIRRLTEEVELLNQQVDELANLKKIAEKQMEEALET 242
Cdd:pfam09730 85 IKEYKVREARLLQDYSELEEENISLQKQVSVLKQNQVEFEGLKHEITRKEEETELLNSQLEEAIRLREIAERQLDEALET 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 243 LQGEREAKYALKKELDGHLNRESMYHISNLAYSI-----------------RSNMEDNASNNSDGEEENLALKRLEADLS 305
Cdd:pfam09730 165 LKTEREQKNSLRKELSHYMTLNDFDYVSHLSISLdglkfsedegagtepnnDGEAMDGGENGGGGLKNSGLDNRTSTPRK 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 306 TELKSP-DGTKCDLFSEIHLNELKKLEKQLESMESEKTHLTANLREAQTSLDKSQNELQNFMSRLALLAAHVDALVQL-- 382
Cdd:pfam09730 245 SEVFPPaPSLVSDLLSELNISEIQKLKQQLIQVEREKVSLLSTLQESQKQLEQAKGALSEQQEKVNRLTENLEAMRGLqa 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 383 -KKQIDVKEQGKEGGQKKDELEQQL-----RALISQYANWFTLSAKEIDGLKTDIAELQKGL-NYTDATTTLRNEVTNLK 455
Cdd:pfam09730 325 sKERQDALDSEKDRDSHEDGDYYEVdingpEILECKYRVAVEEAGELREELKALKARYNTLEeRYKEEKTRWEAEAQDLA 404
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 456 NKLLATEQKS-------LDLQSDVQTLTHISQNAGQSLGSARSTLVALSDDLAQLYHLVCTVNGETPTRVLLDH----KT 524
Cdd:pfam09730 405 EKIRQLEKAShqdqeriAHLEKELGKTRKVAGESEGSLSVAQDELVTFSEELANLYHHVCMCNNETPNRVMLDYyregAG 484
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 525 DDMSFENDSLTAIQSQFKSDVFIAKPQIVEDLQG------------------LADSVEIKKYVDTVSDQIKYLKTAVEHT 586
Cdd:pfam09730 485 ARARKSHQEPRGLRSPRLLTRGLFMGEVGTADTTsnspspcsscpgsptsdfRREPMNIYNLVAIIRDQIKHLQVAVDRT 564
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 587 IDMNKHKIRSEGgdaLEKVNTEEMEELQEQIVKLKSLLSVKREQIGTLRNVLKSNKQTAEVALTNLKSKYENEKIIVSDT 666
Cdd:pfam09730 565 TELSRQRGAALE---LSTESDKDKEALMEEILKLKSLLSTKREQIATLRTVLKANKQTAEVALANLKSKYENEKAMVTET 641
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 386769744 667 MSKLRNELRLLKEDAATFSSLRAMFAARCEEYVTQVDDLNRQLEAAEEEKKTLNQLLRLAVQQKLALTQRLEEME 741
Cdd:pfam09730 642 MMKLRNELKALKEDAATFSSLRAMFATRCDEYVTQLDEMQRQLAAAEDEKKTLNSLLRMAIQQKLALTQRLEDLE 716
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
11-266 |
6.07e-09 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 59.57 E-value: 6.07e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 11 ADQSVQDLQMEVERLTRELDQVSSASAQSAQYGLSLLEEKSALQQKCEELETLYDNTRHELDITQEALtKFQTSQKVTNK 90
Cdd:COG1196 244 LEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERR-RELEERLEELE 322
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 91 TGIEQEDALLNESAARETSLNLQIFDLENELKQLRHELERVRNERDRMLQENSDFGRDKSDSEADRLRLKSELKDLKFRE 170
Cdd:COG1196 323 EELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQL 402
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 171 TRMLSEYSELEEENISLQKQVSSLRSSQVEFEGAKHEIRRLTEEVEllnQQVDELANLKKIAEKQMEEALETLQGEREAK 250
Cdd:COG1196 403 EELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAA---EEEAELEEEEEALLELLAELLEEAALLEAAL 479
|
250
....*....|....*.
gi 386769744 251 YALKKELDGHLNRESM 266
Cdd:COG1196 480 AELLEELAEAAARLLL 495
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
12-741 |
1.91e-08 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 58.14 E-value: 1.91e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 12 DQSVQDLQMEVERLTRELDQVSSASAQSAQYGLSLLEEKSALQQKCEELETLYDNTRHELDITQEALTKFqtsqkvtnKT 91
Cdd:TIGR02168 301 EQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEEL--------ES 372
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 92 GIEQEDALLNESAARETSLNLQIFDLENELKQLRHELERVRNERDRMLQENSDFGRDKSDSEADRLRLKSELKDlkfret 171
Cdd:TIGR02168 373 RLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAELEELE------ 446
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 172 rmlseyseleeenISLQKQVSSLRSSQVEFEGAKHEIRRLTEEVELLNQQVDELANLKKIAEKQMEEALETLQGEREAKY 251
Cdd:TIGR02168 447 -------------EELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLK 513
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 252 AlKKELDGHLNR-------ESMYHISNLAYsIRSNMEDNASNNSDGEEENLALkrleadlsteLKSPDGTKCDLFSEIHL 324
Cdd:TIGR02168 514 N-QSGLSGILGVlselisvDEGYEAAIEAA-LGGRLQAVVVENLNAAKKAIAF----------LKQNELGRVTFLPLDSI 581
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 325 NELKKLEKQLESMESEKTHLTAnLREAQTSLDKSQNELQNFMSRLALLAAHVDALVQLKK-------------------- 384
Cdd:TIGR02168 582 KGTEIQGNDREILKNIEGFLGV-AKDLVKFDPKLRKALSYLLGGVLVVDDLDNALELAKKlrpgyrivtldgdlvrpggv 660
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 385 --QIDVKEQGKEGGQKK--DELEQQLRALISQYANwftlSAKEIDGLKTDIAELQkglnytDATTTLRNEVTNLKNKLLA 460
Cdd:TIGR02168 661 itGGSAKTNSSILERRReiEELEEKIEELEEKIAE----LEKALAELRKELEELE------EELEQLRKELEELSRQISA 730
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 461 TEQKSLDLQSDVQTLTHISQNAGQSLGSARSTLVALSDDLAQLYHLVCTVNGEtptRVLLDHKTDDMSFENDSLTAIQSQ 540
Cdd:TIGR02168 731 LRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAE---IEELEAQIEQLKEELKALREALDE 807
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 541 FKSDVFIAKPQIVEDLQGLADSVEIKKYVDTVSDQIKYLKTAVEHTIDMNKHKIRS--EGGDALE---KVNTEEMEELQE 615
Cdd:TIGR02168 808 LRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEEleELIEELEselEALLNERASLEE 887
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 616 QIVKLKSLLSVKREQIGTLRNVLKSNKQTAEvALTNLKSKYENE----KIIVSDTMSKLRNELRLLKEDAATFSSLRAMF 691
Cdd:TIGR02168 888 ALALLRSELEELSEELRELESKRSELRRELE-ELREKLAQLELRleglEVRIDNLQERLSEEYSLTLEEAEALENKIEDD 966
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*..
gi 386769744 692 AARCEEyvtQVDDLNRQLE-------AAEEEKKTLNQLLRLAVQQKLALTQRLEEME 741
Cdd:TIGR02168 967 EEEARR---RLKRLENKIKelgpvnlAAIEEYEELKERYDFLTAQKEDLTEAKETLE 1020
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
90-372 |
2.12e-07 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 54.68 E-value: 2.12e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 90 KTGIEQEDALLNESAARETSLNLQIFDLENELKQLRHELERVRNERDRMLQENSDFGRDKSDSEADRLRLKSELKDLKfr 169
Cdd:TIGR02168 238 REELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLE-- 315
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 170 etrmlseySELEEENISLQKQVSSLRSSQVEFEGAKHEIRRLTEEVELLNQQVDELANLKKIAEKQMEEALETLQGEREA 249
Cdd:TIGR02168 316 --------RQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSK 387
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 250 KYALKKELdghlnresmyhisnlaYSIRSNMEDNASNNSDGEEENLALKRLEADLSTELKSPDGTKCDLFSEIHLNELKK 329
Cdd:TIGR02168 388 VAQLELQI----------------ASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAELEELEEELEE 451
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 386769744 330 LEKQLESMESEKTHLTANLREAQTSLDKSQNELQNFMSRLALL 372
Cdd:TIGR02168 452 LQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSL 494
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
11-744 |
2.56e-07 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 54.29 E-value: 2.56e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 11 ADQSVQDLQMEVERLTRELDQVSSASAQSAQYGLSLLEEKSALQQKCEELETLYDNTRHELDITQEALTKFQTSQKVTNk 90
Cdd:TIGR02168 244 LQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELE- 322
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 91 TGIEQEDALLNESAARETSLNLQIFDLENELKQLRHELERVRNERDRMLQENsdfgrdkSDSEADRLRLKSELKDLKFRE 170
Cdd:TIGR02168 323 AQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRL-------EELEEQLETLRSKVAQLELQI 395
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 171 TrmlseyseleeeniSLQKQVSSLRSsqvEFEGAKHEIRRLTEEVELLNQQVDElANLKKIAEK--QMEEALETLQGERE 248
Cdd:TIGR02168 396 A--------------SLNNEIERLEA---RLERLEDRRERLQQEIEELLKKLEE-AELKELQAEleELEEELEELQEELE 457
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 249 AKYALKKELDGHLN---------RESMYHISNLAYSIRSnMEDNASNNSDGEEENLALKRLEAD----LSTELKSPDG-- 313
Cdd:TIGR02168 458 RLEEALEELREELEeaeqaldaaERELAQLQARLDSLER-LQENLEGFSEGVKALLKNQSGLSGilgvLSELISVDEGye 536
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 314 TKCDLFSEIHLNEL--KKLEKQLESMESEK-------THLTANLREAQTSLDKSQNELQNFMSRLALLAAHVDALVQLKK 384
Cdd:TIGR02168 537 AAIEAALGGRLQAVvvENLNAAKKAIAFLKqnelgrvTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRK 616
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 385 QID-------VKEQGKEGgqkkdeleQQLRALISQYANWFTLSAKEI--DGLKTdiaelqKGLNYTDATTT-LRNEVTNL 454
Cdd:TIGR02168 617 ALSyllggvlVVDDLDNA--------LELAKKLRPGYRIVTLDGDLVrpGGVIT------GGSAKTNSSILeRRREIEEL 682
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 455 KNKLLATEQKSLDLQSDVQTLTHISQNAGQSLGSARSTLVALSDDLAQLYHLVCTvngETPTRVLLDHKTDDMSFENDSL 534
Cdd:TIGR02168 683 EEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLAR---LEAEVEQLEERIAQLSKELTEL 759
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 535 TAIQSQFKSDVFIAKPQIVEDLQGLAdsvEIKKYVDTVSDQIKYLKTAVehtidmnkhkirseggDALEKVNTEEMEELQ 614
Cdd:TIGR02168 760 EAEIEELEERLEEAEEELAEAEAEIE---ELEAQIEQLKEELKALREAL----------------DELRAELTLLNEEAA 820
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 615 EQIVKLKSLLSVKREQIGTLRNVLKSNKQTAEvaltnlkskyenEKIIVSDTMSKLRNELRLLKEDAATFSSLRAMFAAR 694
Cdd:TIGR02168 821 NLRERLESLERRIAATERRLEDLEEQIEELSE------------DIESLAAEIEELEELIEELESELEALLNERASLEEA 888
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|
gi 386769744 695 CEEYVTQVDDLNRQLEAAEEEKKTLNQLLRLAVQQKLALTQRLEEMEMDR 744
Cdd:TIGR02168 889 LALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRI 938
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
11-263 |
2.17e-06 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 51.48 E-value: 2.17e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 11 ADQSVQDLQMEVERLTRELDQVSSASAQSAQYGLSLLEEKSALQQKCEELETLYDNTRHELDITQEALTKFQTSQKVTNK 90
Cdd:COG1196 272 LRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEE 351
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 91 TgIEQEDALLNESAARETSLNLQIFDLENELKQLRHELERVRNERDRMLQENSDFGRDKSDSEADRLRLKSELKDLkfrE 170
Cdd:COG1196 352 E-LEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEEL---E 427
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 171 TRMLSEYSELEEENISLQKQVSSLRSSQVEFEGAKHEIRRLTEEVELLNQQVDELaNLKKIAEKQMEEALETLQGEREAK 250
Cdd:COG1196 428 EALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAEL-LEELAEAAARLLLLLEAEADYEGF 506
|
250
....*....|...
gi 386769744 251 YALKKELDGHLNR 263
Cdd:COG1196 507 LEGVKAALLLAGL 519
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
326-748 |
1.56e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 48.76 E-value: 1.56e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 326 ELKKLEKQLESMESEKTHLTANLREAQTSLDKSQNELQNFmsRLALLAAHVDALVQLKKQIDVKEQGKEGGQKK-DELEQ 404
Cdd:COG4913 289 RLELLEAELEELRAELARLEAELERLEARLDALREELDEL--EAQIRGNGGDRLEQLEREIERLERELEERERRrARLEA 366
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 405 QLRAL---ISQYANWFTLSAKEIDGLKTDIAELQKGLNytDATTTLRNEVTNLKNKL--LATEQKSLDLQSD------VQ 473
Cdd:COG4913 367 LLAALglpLPASAEEFAALRAEAAALLEALEEELEALE--EALAEAEAALRDLRRELreLEAEIASLERRKSniparlLA 444
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 474 TLTHISQNAGQS---------------------------LGSARSTLVALSDDLAQL------YHLVCTVNGEtptRV-L 519
Cdd:COG4913 445 LRDALAEALGLDeaelpfvgelievrpeeerwrgaiervLGGFALTLLVPPEHYAAAlrwvnrLHLRGRLVYE---RVrT 521
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 520 LDHKTDDMSFENDSLTA------------IQSQFKSDVFIAKPQIVEDLQGLADSVeikkyvdTVSDQIKYLKTAVEHTI 587
Cdd:COG4913 522 GLPDPERPRLDPDSLAGkldfkphpfrawLEAELGRRFDYVCVDSPEELRRHPRAI-------TRAGQVKGNGTRHEKDD 594
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 588 dmnKHKIRSE---GGDALEKVNT--EEMEELQEQIVKLKSLLSVKREQIGTLRNVLKSNKQTAEVALTNLKSKYENEKIi 662
Cdd:COG4913 595 ---RRRIRSRyvlGFDNRAKLAAleAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYSWDEIDVASAEREI- 670
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 663 vsdtmSKLRNELRLLKEDAATFSSLRAmfaaRCEEYVTQVDDLNRQLEAAEEEKKTLNQLLRLAVQQKLALTQRLEEMEM 742
Cdd:COG4913 671 -----AELEAELERLDASSDDLAALEE----QLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAED 741
|
....*.
gi 386769744 743 DRWVHL 748
Cdd:COG4913 742 LARLEL 747
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
105-387 |
2.08e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 48.14 E-value: 2.08e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 105 ARETSLNLQIFDLENELKQLRHELERVRNERDRMLQENSDFGRDKSDSEADRLRLKSELKDLKFRETRMLSEYSeleeen 184
Cdd:TIGR02169 674 AELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLS------ 747
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 185 iSLQKQVSSLRSSQVEFEGakhEIRRLTEEVELLNQQVDEL-ANLKKIAEKQMEEALETLQGEREAKYALKKELDGHLNR 263
Cdd:TIGR02169 748 -SLEQEIENVKSELKELEA---RIEELEEDLHKLEEALNDLeARLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNR 823
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 264 ESMyhisnlaysiRSNMEDNASNNSdgEEENLALKRLEADLSTELKSPDGTKCDLFSEI--HLNELKKLEKQLESMESEK 341
Cdd:TIGR02169 824 LTL----------EKEYLEKEIQEL--QEQRIDLKEQIKSIEKEIENLNGKKEELEEELeeLEAALRDLESRLGDLKKER 891
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 386769744 342 THLTANLREAQTSLDKSQNELQNFMSRLALLAAHVDALVQLKKQID 387
Cdd:TIGR02169 892 DELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIE 937
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
106-741 |
2.30e-05 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 48.01 E-value: 2.30e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 106 RETSLNLQ-IFDLENEL-KQLRH-ELERVRNERDRMLQEnsdfgrdksdsEADRLRLKSELKDLKFRETRMLSEYSELEE 182
Cdd:COG1196 182 EATEENLErLEDILGELeRQLEPlERQAEKAERYRELKE-----------ELKELEAELLLLKLRELEAELEELEAELEE 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 183 ENISLQKQVSSLRSSQVEFEGAKHEIRRLTEEVELLNQQVDELANLKKIAEKQMEEALETLQGEREAKYALKKELDghln 262
Cdd:COG1196 251 LEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELA---- 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 263 resmyhisNLAYSIRSNMEDNASNNSDGEEENLALKRLEADLSTELKspdgtkcdlfseihlnELKKLEKQLESMESEKT 342
Cdd:COG1196 327 --------ELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEE----------------ALLEAEAELAEAEEELE 382
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 343 HLTANLREAQTSLDKSQNELQNFMSRLALLAAHVDALVQLKKQIDVKEQGKEggQKKDELEQQLRALISQYANWFTLSAK 422
Cdd:COG1196 383 ELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELE--EEEEEEEEALEEAAEEEAELEEEEEA 460
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 423 EIDGLKTDIAELQKGLNYTDATTTLRNEVTNLKNKLLATEQKSLDLQSDVQTLTHISQNAG--QSLGSARSTLVALSDDL 500
Cdd:COG1196 461 LLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGlaGAVAVLIGVEAAYEAAL 540
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 501 -----AQLYHLVC--TVNGETPTRVLLDHKTDDMSFEndSLTAIQSQFKSDVFIAKPQIVEDLQGLADSVEIKKYVDTVS 573
Cdd:COG1196 541 eaalaAALQNIVVedDEVAAAAIEYLKAAKAGRATFL--PLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVL 618
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 574 DQIKYLKTAVEHTIDMNKHKIRSEGGDALEKvnTEEMEELQEQIVKLKSLLSVKREQIGTLRNVLKSNKQTAEVALTNLK 653
Cdd:COG1196 619 GDTLLGRTLVAARLEAALRRAVTLAGRLREV--TLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELE 696
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 654 SKYENEKIIVSDTMSKLRNELRLLKEDAATFSSLRAMFAARCEEYVTQVDDLNRQLEAAEEEKKTLNQLlrlavQQKLA- 732
Cdd:COG1196 697 EALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEEL-----ERELEr 771
|
....*....
gi 386769744 733 LTQRLEEME 741
Cdd:COG1196 772 LEREIEALG 780
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
10-458 |
2.91e-05 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 47.62 E-value: 2.91e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 10 SADQSVQDLQMEVERLTRELDQVSSASAQSAQYGLSLLEEKSALQQKCEELETLYDNTRHELDITQEALTKFQTSQKVTN 89
Cdd:COG1196 306 RLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELA 385
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 90 KTGIEQEDALLN------ESAARETSLNLQIFDLENELKQLRHELERVRNERDRMLQENSDFGRDKSDSEADRLRLKSEL 163
Cdd:COG1196 386 EELLEALRAAAElaaqleELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELL 465
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 164 KDLKFRETRMLSEYSELEEENISLQKQVSSLRSSQVEFEGAKHEIRRLTEEVEL--LNQQVDELANLKKIAEKQMEEAL- 240
Cdd:COG1196 466 AELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLrgLAGAVAVLIGVEAAYEAALEAALa 545
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 241 --------ETLQGEREAKYALKKELDG-----HLNRESMYHISNLAYSIRSNMEDNASNNSDGEEENLALKRLEADLS-T 306
Cdd:COG1196 546 aalqnivvEDDEVAAAAIEYLKAAKAGratflPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLgR 625
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 307 ELKSPDGTKCDLFSEIHLNELKKLEKQLESMESEKTHLTANLREAQTSLDKSQNELQNFMSRLA--LLAAHVDALVQLKK 384
Cdd:COG1196 626 TLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAeeELELEEALLAEEEE 705
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 386769744 385 QIDVKEQGKEGGQKKDELEQQLRALISQYANwftLSAKEIDGLKTDIAELQKGLNYTDATTTLRNEVTNLKNKL 458
Cdd:COG1196 706 ERELAEAEEERLEEELEEEALEEQLEAEREE---LLEELLEEEELLEEEALEELPEPPDLEELERELERLEREI 776
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
46-257 |
3.15e-05 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 47.62 E-value: 3.15e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 46 LLEEKSALQQKCEELETLYDNTRHELDITQEALTKFQTSQKVTNKTgIEQEDALLNESAARETSLNLQIFDLENELKQLR 125
Cdd:COG1196 237 LEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELE-LEEAQAEEYELLAELARLEQDIARLEERRRELE 315
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 126 HELERVRNERDRMLQENSDFGRDKSDSEADRLRLKSELKDLKFRETRMLSEYSELEEENISLQKQVSSLRSSQVEFEGAK 205
Cdd:COG1196 316 ERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAA 395
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 386769744 206 HEIRRLTEEVEllnQQVDELANLKKIAEKQMEEALETLQGEREAKYALKKEL 257
Cdd:COG1196 396 AELAAQLEELE---EAEEALLERLERLEEELEELEEALAELEEEEEEEEEAL 444
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
10-250 |
1.11e-04 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 45.70 E-value: 1.11e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 10 SADQSVQDLQMEVERLTRELDQVSSASAQSAQyglsLLEEKSALQQKCEELETLYDNTRHELDITQEALTKFQTSQKVTN 89
Cdd:COG1196 296 ELARLEQDIARLEERRRELEERLEELEEELAE----LEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAE 371
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 90 KTGIEQEDALLNESAARETSLNlQIFDLENELKQLRHELERVRNERDRMLQENSDFGRDKSDSEADRLRLKSELKDLKFR 169
Cdd:COG1196 372 AELAEAEEELEELAEELLEALR-AAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEE 450
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 170 ETRmlseyseleeenisLQKQVSSLRSSQVEfegAKHEIRRLTEEVELLNQQVDELANLKKIAEKQMEEALETLQGEREA 249
Cdd:COG1196 451 EAE--------------LEEEEEALLELLAE---LLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAA 513
|
.
gi 386769744 250 K 250
Cdd:COG1196 514 L 514
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
112-258 |
9.18e-04 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 41.45 E-value: 9.18e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 112 LQIFDLENELKQLRHELERVRNERDRMLQENSDFGRDKSDSEADRLRLKSELKDLKFRETRmlseyseleeenisLQKQV 191
Cdd:COG1579 17 SELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKK--------------YEEQL 82
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 386769744 192 SSLRSSQvEFEGAKHEIRRLTEEVELLNQQVDELANLKKIAEKQMEEALETLQGEREAKYALKKELD 258
Cdd:COG1579 83 GNVRNNK-EYEALQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELD 148
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
47-259 |
9.48e-04 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 42.75 E-value: 9.48e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 47 LEEKSALQQKCEELETLYDNTRHELDITQEALTKFQTSQKVtnktgieQEDALLNESAARETSLNLQIFDLE-------- 118
Cdd:TIGR02169 310 IAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERK-------RRDKLTEEYAELKEELEDLRAELEevdkefae 382
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 119 --NELKQLRHELERVRNERDRMLQENSDFGRDKSDSEADRLRLKSELKDLKFRETRMLSEYSELEEEnisLQKQVSSLRS 196
Cdd:TIGR02169 383 trDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALE---IKKQEWKLEQ 459
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 386769744 197 SQVEFEGAKHEIRRLTEEVELLNQQVDELANLKKIAEKQMEEALETLQGEREAKYALKKELDG 259
Cdd:TIGR02169 460 LAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQG 522
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
56-249 |
1.49e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 42.21 E-value: 1.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 56 KCEELETLydnTRHELDITQEALTKFQTSQKVTNKTGIEQEDALLNESAARetslnlQIFDLENELKQLRHELERVRNER 135
Cdd:COG4913 563 CVDSPEEL---RRHPRAITRAGQVKGNGTRHEKDDRRRIRSRYVLGFDNRA------KLAALEAELAELEEELAEAEERL 633
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 136 DRMlqensdfgRDKSDSEADRLRLKSELKDLKFRETRMLSEYSELEeeniSLQKQVSSLRSSQVEFEGAKHEIRRLTEEV 215
Cdd:COG4913 634 EAL--------EAELDALQERREALQRLAEYSWDEIDVASAEREIA----ELEAELERLDASSDDLAALEEQLEELEAEL 701
|
170 180 190
....*....|....*....|....*....|....
gi 386769744 216 ELLNQQVDELANLKKIAEKQMEEALETLQGEREA 249
Cdd:COG4913 702 EELEEELDELKGEIGRLEKELEQAEEELDELQDR 735
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
18-471 |
3.45e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 40.91 E-value: 3.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 18 LQMEVERLTRELDQVSSASAQSAQYGLSLLEEKSALQQKCEELETLYDNTRHELDITQEALTKFQTSQKVTnktgieqed 97
Cdd:COG4717 44 RAMLLERLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEEL--------- 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 98 allnESAARETSLNLQIFDLENELKQLRHELERVRNERDRMLQENSDFgrdkSDSEADRLRLKSELKDLKFRETRMLSEY 177
Cdd:COG4717 115 ----REELEKLEKLLQLLPLYQELEALEAELAELPERLEELEERLEEL----RELEEELEELEAELAELQEELEELLEQL 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 178 SELEEENisLQKQVSSLRSSQVEFEGAKHEIRRLTEEVELLNQQVDELANLKKIAEKQME-EALETLQGEREAKYALKKE 256
Cdd:COG4717 187 SLATEEE--LQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERlKEARLLLLIAAALLALLGL 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 257 LDGHLNRESMYH--------ISNLAYSIRSNMEDNASNNSDGEEENLALKRLEADLSTELKSPDGTKCDLfSEIHLNELK 328
Cdd:COG4717 265 GGSLLSLILTIAgvlflvlgLLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDL-SPEELLELL 343
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 329 KLEKQLESMESEKTHLTANLReaqtsLDKSQNELQNFmsrlaLLAAHVDALVQLKKQIDVKEQGKEGGQKKDELEQQLRA 408
Cdd:COG4717 344 DRIEELQELLREAEELEEELQ-----LEELEQEIAAL-----LAEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEE 413
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 386769744 409 LISQYANWftLSAKEIDGLKTDIAELQKGLNytdattTLRNEVTNLKNKLLATEQKSLDLQSD 471
Cdd:COG4717 414 LLGELEEL--LEALDEEELEEELEELEEELE------ELEEELEELREELAELEAELEQLEED 468
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
321-744 |
4.20e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 40.52 E-value: 4.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 321 EIHLNELKKLEKQLESMESEKTH---LTANLREAQTSLDKSQNELQNFMSRLALLAAHVDALVQLKKQIDVKEQGKEGGQ 397
Cdd:COG4717 67 ELNLKELKELEEELKEAEEKEEEyaeLQEELEELEEELEELEAELEELREELEKLEKLLQLLPLYQELEALEAELAELPE 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 398 KKDELEQQLRALISQYANWFTLSAkEIDGLKTDIAELQKGLNYTDATT---------TLRNEVTNLKNKLLATEQKSLDL 468
Cdd:COG4717 147 RLEELEERLEELRELEEELEELEA-ELAELQEELEELLEQLSLATEEElqdlaeeleELQQRLAELEEELEEAQEELEEL 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 469 QSDVQTL--THISQNAGQSLGSARSTLVALSddlaqlyhLVCTVNGETPTRVLLDHKTDDMSFENDSLTAIQSQFKSDVF 546
Cdd:COG4717 226 EEELEQLenELEAAALEERLKEARLLLLIAA--------ALLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREK 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 547 IAKPQIVEDLQGLADSVEIKKYvdtvsdQIKYLKTAVEhtidmnkhkirseggdALEKVNTEEMEELQEQIVKLKSLLSV 626
Cdd:COG4717 298 ASLGKEAEELQALPALEELEEE------ELEELLAALG----------------LPPDLSPEELLELLDRIEELQELLRE 355
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 627 KREQIGTLRNVLKSNKQTAEVALTNLKSKYE-NEKIIVSDTMSKLRNELRLLKED-AATFSSLRAMFAARCEEYV-TQVD 703
Cdd:COG4717 356 AEELEEELQLEELEQEIAALLAEAGVEDEEElRAALEQAEEYQELKEELEELEEQlEELLGELEELLEALDEEELeEELE 435
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 386769744 704 DLNRQLEAAEEEKKTLNqllrlavQQKLALTQRLEEMEMDR 744
Cdd:COG4717 436 ELEEELEELEEELEELR-------EELAELEAELEQLEEDG 469
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
19-258 |
8.17e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 39.72 E-value: 8.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 19 QMEVERLTRELDQVssasAQSAQYGLSLLEEKSALQQKCEELETLY-DNTRHELDITQEaLTKFQTSQKVTNKTGIEQED 97
Cdd:pfam17380 295 KMEQERLRQEKEEK----AREVERRRKLEEAEKARQAEMDRQAAIYaEQERMAMERERE-LERIRQEERKRELERIRQEE 369
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 98 ALLNESAAREtslnLQIFDLENELK--QLRHELERVRN------ERDRMLQENS-DFGRDKSDSEADRLRLKSELKDLKF 168
Cdd:pfam17380 370 IAMEISRMRE----LERLQMERQQKneRVRQELEAARKvkileeERQRKIQQQKvEMEQIRAEQEEARQREVRRLEEERA 445
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 169 RETRMLSEYSELEEENIS-LQKQVSSLRSSQVEFEGAKHEIRRLTE--------EVELLNQQVDELANLKKIAEKQMEE- 238
Cdd:pfam17380 446 REMERVRLEEQERQQQVErLRQQEEERKRKKLELEKEKRDRKRAEEqrrkilekELEERKQAMIEEERKRKLLEKEMEEr 525
|
250 260
....*....|....*....|..
gi 386769744 239 --ALETLQGEREAKYALKKELD 258
Cdd:pfam17380 526 qkAIYEEERRREAEEERRKQQE 547
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
185-384 |
9.67e-03 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 39.14 E-value: 9.67e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 185 ISLQKQVSSLRSSqVEFEGAKHEIRRLTEEVELLNQQVDELANLKKIAE--KQMEEALETLQGEREAKYALKKEL----- 257
Cdd:PRK05771 53 TKLSEALDKLRSY-LPKLNPLREEKKKVSVKSLEELIKDVEEELEKIEKeiKELEEEISELENEIKELEQEIERLepwgn 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386769744 258 ----DGHLNRESMYHIsnLAYSIRSNMEDNASNNSD-------GEEEN------LALKRLEADLSTELKSPDGTKCDLFS 320
Cdd:PRK05771 132 fdldLSLLLGFKYVSV--FVGTVPEDKLEELKLESDvenveyiSTDKGyvyvvvVVLKELSDEVEEELKKLGFERLELEE 209
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 386769744 321 EIHLNE-LKKLEKQLESMESEKTHLTANLREaqtSLDKSQNELQNFMSRLALLAAHVDALVQLKK 384
Cdd:PRK05771 210 EGTPSElIREIKEELEEIEKERESLLEELKE---LAKKYLEELLALYEYLEIELERAEALSKFLK 271
|
|
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