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Conserved domains on  [gi|386768929|ref|NP_001245832|]
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uncharacterized protein Dmel_CG5001, isoform B [Drosophila melanogaster]

Protein Classification

J domain-containing protein( domain architecture ID 1001220)

J domain-containing protein similar to molecular chaperone DnaJ, part of the DnaK-DnaJ-GrpE system, prevents the aggregation of unfolded substrate and acts primarily by stimulating the ATPase activity of Hsp70

CATH:  1.10.287.110
Gene Ontology:  GO:0006457
SCOP:  4000605

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
DnaJ_bact super family cl37091
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
4-347 6.47e-64

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


The actual alignment was detected with superfamily member TIGR02349:

Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 206.68  E-value: 6.47e-64
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929    4 DYYKILGLPKTATDDEIKKAYRKLALRYHPDKNKAANAEDKFKEVAEAYEVLSDKSKREVYDKYGEDGLKSGGtrnggps 83
Cdd:TIGR02349   1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGG------- 73
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929   84 snsftyqfhgdpratFAQFFGNSNPFASFFDMGDnlfdkkvfdldtepDFFSSPFGGIGsrhglGSGFRPSFRShsfnvh 163
Cdd:TIGR02349  74 ---------------GGGGGGFNGFDIGFFGDFG--------------DIFGDFFGGGG-----GSGRRRRSGP------ 113
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929  164 tpfkkeqKQDPPVEHDLYVTLEEIYHGCVKKMKISR---------------------------------------RIVQA 204
Cdd:TIGR02349 114 -------RRGEDLRYDLELTFEEAVFGVEKEIEIPRkescetchgtgakpgtdpktcptcggtgqvrrqqgtpfgFFQQQ 186
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929  205 D--------------------GSSR-KEEKFLAISIKPGWKSGTKVTFQKEGDQAP-GKIPADIVFIIRDKPHAMFKREG 262
Cdd:TIGR02349 187 QtcptcggegkiikepcstckGKGRvKERKTITVKIPAGVDTGQRLRVSGKGNAGEnGGPNGDLYVVIRVKPHKIFERDG 266
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929  263 SDLRYTARLTLKQALCGVVFQVPTMSGD-KLRIstmQEIIKPNTVKRIQGYGLPFPKdTTRKGDLLVAFDIQFPEKLTAA 341
Cdd:TIGR02349 267 NDLYIEVPISFTQAILGGEIEVPTLDGDvKLKI---PAGTQSGTVFRLKGKGVPRLR-GNGRGDLLVTVKVETPKNLSKE 342

                  ....*.
gi 386768929  342 QKEVLK 347
Cdd:TIGR02349 343 QKELLE 348
 
Name Accession Description Interval E-value
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
4-347 6.47e-64

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 206.68  E-value: 6.47e-64
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929    4 DYYKILGLPKTATDDEIKKAYRKLALRYHPDKNKAANAEDKFKEVAEAYEVLSDKSKREVYDKYGEDGLKSGGtrnggps 83
Cdd:TIGR02349   1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGG------- 73
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929   84 snsftyqfhgdpratFAQFFGNSNPFASFFDMGDnlfdkkvfdldtepDFFSSPFGGIGsrhglGSGFRPSFRShsfnvh 163
Cdd:TIGR02349  74 ---------------GGGGGGFNGFDIGFFGDFG--------------DIFGDFFGGGG-----GSGRRRRSGP------ 113
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929  164 tpfkkeqKQDPPVEHDLYVTLEEIYHGCVKKMKISR---------------------------------------RIVQA 204
Cdd:TIGR02349 114 -------RRGEDLRYDLELTFEEAVFGVEKEIEIPRkescetchgtgakpgtdpktcptcggtgqvrrqqgtpfgFFQQQ 186
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929  205 D--------------------GSSR-KEEKFLAISIKPGWKSGTKVTFQKEGDQAP-GKIPADIVFIIRDKPHAMFKREG 262
Cdd:TIGR02349 187 QtcptcggegkiikepcstckGKGRvKERKTITVKIPAGVDTGQRLRVSGKGNAGEnGGPNGDLYVVIRVKPHKIFERDG 266
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929  263 SDLRYTARLTLKQALCGVVFQVPTMSGD-KLRIstmQEIIKPNTVKRIQGYGLPFPKdTTRKGDLLVAFDIQFPEKLTAA 341
Cdd:TIGR02349 267 NDLYIEVPISFTQAILGGEIEVPTLDGDvKLKI---PAGTQSGTVFRLKGKGVPRLR-GNGRGDLLVTVKVETPKNLSKE 342

                  ....*.
gi 386768929  342 QKEVLK 347
Cdd:TIGR02349 343 QKELLE 348
PTZ00037 PTZ00037
DnaJ_C chaperone protein; Provisional
3-350 2.01e-60

DnaJ_C chaperone protein; Provisional


Pssm-ID: 240236 [Multi-domain]  Cd Length: 421  Bit Score: 199.66  E-value: 2.01e-60
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929   3 KDYYKILGLPKTATDDEIKKAYRKLALRYHPDKnkaANAEDKFKEVAEAYEVLSDKSKREVYDKYGEDGLKSGGTrnggp 82
Cdd:PTZ00037  28 EKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDK---GGDPEKFKEISRAYEVLSDPEKRKIYDEYGEEGLEGGEQ----- 99
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929  83 ssnsftyqfHGDPRATFAQFFGNSNPFASFFDMGD----------NLFDKKVFDLDTEPDFFSSPFGGIGSRHGL----- 147
Cdd:PTZ00037 100 ---------PADASDLFDLIFGGGRKPGGKKRGEDivshlkvtleQIYNGAMRKLAINKDVICANCEGHGGPKDAfvdck 170
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 148 ---GSGFRPSFRSHSFNVHtpfkkeQKQDPpvehdlyvtleeiYHGCVKKMKI---SRRIVQADGS-SRKEEKFLAISIK 220
Cdd:PTZ00037 171 lcnGQGIRVQIRQMGSMIH------QTQST-------------CNSCNGQGKIipeSKKCKNCSGKgVKKTRKILEVNID 231
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 221 PGWKSGTKVTFQKEGDQAPGKIPADIVFIIRDKPHAMFKREGSDLRYTARLTLKQALCGVVFQVPTMSGDKLRI-STMQE 299
Cdd:PTZ00037 232 KGVPNQHKITFHGEADEKPNEIPGNVVFILNEKPHDTFKREGGDLFITKKISLYEALTGFVFYITHLDGRKLLVnTPPGE 311
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|...
gi 386768929 300 IIKPNTVKRIQGYGLPFPKDTTRKGDLLVAFDIQFP--EKLTAAQKEVLKDML 350
Cdd:PTZ00037 312 VVKPGDIKVINNEGMPTYKSPFKKGNLYVTFEVIFPvdRKFTNEEKEILKSLF 364
DnaJ_C cd10747
C-terminal substrate binding domain of DnaJ and HSP40; The C-terminal region of the DnaJ/Hsp40 ...
174-338 2.08e-48

C-terminal substrate binding domain of DnaJ and HSP40; The C-terminal region of the DnaJ/Hsp40 protein mediates oligomerization and binding to denatured polypeptide substrate. DnaJ/Hsp40 is a widely conserved heat-shock protein. It prevents the aggregation of unfolded substrate and forms a ternary complex with both substrate and DnaK/Hsp70; the N-terminal J-domain of DnaJ/Hsp40 stimulates the ATPase activity of DnaK/Hsp70.


Pssm-ID: 199909 [Multi-domain]  Cd Length: 158  Bit Score: 160.28  E-value: 2.08e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 174 PPVEHDLYVTLEEIYHGCVKKMKISRRIVQadgssRKEEKFLAISIKPGWKSGTKVTFQKEGDQAP-GKIPADIVFIIRD 252
Cdd:cd10747    1 ADLRYDLELTLEEAYFGKEKEIKIPRKVTR-----VREKKTLTVKIPAGVDDGQRLRLRGEGDAGPnGGPPGDLYVVIRV 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 253 KPHAMFKREGSDLRYTARLTLKQALCGVVFQVPTMSGD-KLRIstmQEIIKPNTVKRIQGYGLPFPKdTTRKGDLLVAFD 331
Cdd:cd10747   76 KPHPVFRRDGNDLYCEVPISLTEALLGGEIEVPTLGGKvKLKI---PPGTQPGTVLRLKGKGMPRLR-GGGRGDLYVEVK 151

                 ....*..
gi 386768929 332 IQFPEKL 338
Cdd:cd10747  152 VEFPKKL 158
DnaJ_C pfam01556
DnaJ C terminal domain; This family consists of the C terminal region of the DnaJ protein. It ...
176-335 2.71e-40

DnaJ C terminal domain; This family consists of the C terminal region of the DnaJ protein. It is always found associated with pfam00226 and pfam00684. DnaJ is a chaperone associated with the Hsp70 heat-shock system involved in protein folding and renaturation after stress. The two C-terminal domains CTDI and CTDII, both incorporated in this family are necessary for maintaining the J-domains in their specific relative positions. Structural analysis of PDB:1nlt shows that PF00684 is nested within this DnaJ C-terminal region.


Pssm-ID: 460251 [Multi-domain]  Cd Length: 213  Bit Score: 140.85  E-value: 2.71e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929  176 VEHDLYVTLEEIYHGCVKKMKISRRIVQAD-------------------------------------------------- 205
Cdd:pfam01556   1 LEYELELTLEEAYFGCTKKIKITRNVICDTcggsgakpgtspktcpccggggqvrrqfgffstctccpccggggkiidkc 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929  206 -----GSSRKEEKFLAISIKPGWKSGTKVTFQKEGDQAP-GKIPADIVFIIRDKPHAMFKREGSDLRYTARLTLKQALCG 279
Cdd:pfam01556  81 ckccgGGGVVEKKTLEVKIPAGVDDGQRIRLRGEGDAGEnGGPPGDLYVVIRVKPHPVFRRDGDDLYCTVPISLTEALLG 160
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 386768929  280 VVFQVPTMSGD-KLRIstmQEIIKPNTVKRIQGYGLPFPKDTTRkGDLLVAFDIQFP 335
Cdd:pfam01556 161 GTIEVPTLDGKvKLKI---PAGTQPGTVLRLKGKGMPRLKGGGR-GDLYVTVKVEVP 213
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
4-82 9.74e-35

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 124.04  E-value: 9.74e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929   4 DYYKILGLPKTATDDEIKKAYRKLALRYHPDKNKA-ANAEDKFKEVAEAYEVLSDKSKREVYDKYGEDGLKSGGTRNGGP 82
Cdd:COG0484    1 DYYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGdPEAEEKFKEINEAYEVLSDPEKRAAYDRFGHAAELLLATELAES 80
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
3-134 3.78e-34

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 130.33  E-value: 3.78e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929   3 KDYYKILGLPKTATDDEIKKAYRKLALRYHPDKNKAANAEDKFKEVAEAYEVLSDKSKREVYDKYGEDGL-KSGGtrngg 81
Cdd:NF037946   5 RDYYEVLGVDRDADDQEIKKAFRKLAKKYHPDRNKAPDAAEIFAEINEAYEVLSNPEKRANYDKYGHDGVdGEGG----- 79
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|...
gi 386768929  82 pssnsftyqFHGDPRATFAQFFGNSNPFASFFdmgDNLFDKKVFDLDTEPDFF 134
Cdd:NF037946  80 ---------FGFDAFDVFSSFFETINKSGAFL---DDSVDESVSADDDLDRLF 120
DnaJ smart00271
DnaJ molecular chaperone homology domain;
3-60 4.19e-27

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 101.54  E-value: 4.19e-27
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929     3 KDYYKILGLPKTATDDEIKKAYRKLALRYHPDKNK--AANAEDKFKEVAEAYEVLSDKSK 60
Cdd:smart00271   1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPgdKEEAEEKFKEINEAYEVLSDPEK 60
 
Name Accession Description Interval E-value
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
4-347 6.47e-64

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 206.68  E-value: 6.47e-64
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929    4 DYYKILGLPKTATDDEIKKAYRKLALRYHPDKNKAANAEDKFKEVAEAYEVLSDKSKREVYDKYGEDGLKSGGtrnggps 83
Cdd:TIGR02349   1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGG------- 73
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929   84 snsftyqfhgdpratFAQFFGNSNPFASFFDMGDnlfdkkvfdldtepDFFSSPFGGIGsrhglGSGFRPSFRShsfnvh 163
Cdd:TIGR02349  74 ---------------GGGGGGFNGFDIGFFGDFG--------------DIFGDFFGGGG-----GSGRRRRSGP------ 113
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929  164 tpfkkeqKQDPPVEHDLYVTLEEIYHGCVKKMKISR---------------------------------------RIVQA 204
Cdd:TIGR02349 114 -------RRGEDLRYDLELTFEEAVFGVEKEIEIPRkescetchgtgakpgtdpktcptcggtgqvrrqqgtpfgFFQQQ 186
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929  205 D--------------------GSSR-KEEKFLAISIKPGWKSGTKVTFQKEGDQAP-GKIPADIVFIIRDKPHAMFKREG 262
Cdd:TIGR02349 187 QtcptcggegkiikepcstckGKGRvKERKTITVKIPAGVDTGQRLRVSGKGNAGEnGGPNGDLYVVIRVKPHKIFERDG 266
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929  263 SDLRYTARLTLKQALCGVVFQVPTMSGD-KLRIstmQEIIKPNTVKRIQGYGLPFPKdTTRKGDLLVAFDIQFPEKLTAA 341
Cdd:TIGR02349 267 NDLYIEVPISFTQAILGGEIEVPTLDGDvKLKI---PAGTQSGTVFRLKGKGVPRLR-GNGRGDLLVTVKVETPKNLSKE 342

                  ....*.
gi 386768929  342 QKEVLK 347
Cdd:TIGR02349 343 QKELLE 348
PTZ00037 PTZ00037
DnaJ_C chaperone protein; Provisional
3-350 2.01e-60

DnaJ_C chaperone protein; Provisional


Pssm-ID: 240236 [Multi-domain]  Cd Length: 421  Bit Score: 199.66  E-value: 2.01e-60
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929   3 KDYYKILGLPKTATDDEIKKAYRKLALRYHPDKnkaANAEDKFKEVAEAYEVLSDKSKREVYDKYGEDGLKSGGTrnggp 82
Cdd:PTZ00037  28 EKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDK---GGDPEKFKEISRAYEVLSDPEKRKIYDEYGEEGLEGGEQ----- 99
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929  83 ssnsftyqfHGDPRATFAQFFGNSNPFASFFDMGD----------NLFDKKVFDLDTEPDFFSSPFGGIGSRHGL----- 147
Cdd:PTZ00037 100 ---------PADASDLFDLIFGGGRKPGGKKRGEDivshlkvtleQIYNGAMRKLAINKDVICANCEGHGGPKDAfvdck 170
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 148 ---GSGFRPSFRSHSFNVHtpfkkeQKQDPpvehdlyvtleeiYHGCVKKMKI---SRRIVQADGS-SRKEEKFLAISIK 220
Cdd:PTZ00037 171 lcnGQGIRVQIRQMGSMIH------QTQST-------------CNSCNGQGKIipeSKKCKNCSGKgVKKTRKILEVNID 231
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 221 PGWKSGTKVTFQKEGDQAPGKIPADIVFIIRDKPHAMFKREGSDLRYTARLTLKQALCGVVFQVPTMSGDKLRI-STMQE 299
Cdd:PTZ00037 232 KGVPNQHKITFHGEADEKPNEIPGNVVFILNEKPHDTFKREGGDLFITKKISLYEALTGFVFYITHLDGRKLLVnTPPGE 311
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|...
gi 386768929 300 IIKPNTVKRIQGYGLPFPKDTTRKGDLLVAFDIQFP--EKLTAAQKEVLKDML 350
Cdd:PTZ00037 312 VVKPGDIKVINNEGMPTYKSPFKKGNLYVTFEVIFPvdRKFTNEEKEILKSLF 364
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
1-347 7.64e-51

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 173.41  E-value: 7.64e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929   1 MGKDYYKILGLPKTATDDEIKKAYRKLALRYHPDKNKA-ANAEDKFKEVAEAYEVLSDKSKREVYDKYGEDGLKSGGTRN 79
Cdd:PRK10767   2 AKRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGdKEAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFEQGGGGG 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929  80 GgpssnsftyqfhgdpratfaqfFGNSNPFASFFDmgdnlfdkkvfdldtepDFFSSPFGGIGSRHGlGSGFRPSfrshs 159
Cdd:PRK10767  82 G----------------------FGGGGGFGDIFG-----------------DIFGDIFGGGRGGGR-QRARRGA----- 116
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 160 fnvhtpfkkeqkqDppVEHDLYVTLEEIYHGCVKKMKISRRI---------------------------VQA-------- 204
Cdd:PRK10767 117 -------------D--LRYNMEITLEEAVRGVTKEIRIPTLVtcdtchgsgakpgtspktcptchgagqVRMqqgfftvq 181
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 205 --------------------DGSSR-KEEKFLAISIKPGWKSGTKVTFQKEGDQAP-GKIPADIVFIIRDKPHAMFKREG 262
Cdd:PRK10767 182 qtcptchgrgkiikdpckkcHGQGRvEKEKTLSVKIPAGVDTGDRIRLSGEGEAGErGGPAGDLYVQIHVKEHPIFERDG 261
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 263 SDLRYTARLTLKQALCGVVFQVPTMSGD-KLRIStmqEIIKPNTVKRIQGYGLPfPKDTTRKGDLLVAFDIQFPEKLTAA 341
Cdd:PRK10767 262 NDLYCEVPISFTTAALGGEIEVPTLDGRvKLKIP---EGTQTGKLFRLRGKGVK-SVRSGARGDLYCQVVVETPVNLTKR 337

                 ....*.
gi 386768929 342 QKEVLK 347
Cdd:PRK10767 338 QKELLE 343
PRK14277 PRK14277
chaperone protein DnaJ; Provisional
1-348 1.58e-50

chaperone protein DnaJ; Provisional


Pssm-ID: 184599 [Multi-domain]  Cd Length: 386  Bit Score: 173.06  E-value: 1.58e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929   1 MGKDYYKILGLPKTATDDEIKKAYRKLALRYHPDKNKA-ANAEDKFKEVAEAYEVLSDKSKREVYDKYGEDGLKSGGTRN 79
Cdd:PRK14277   3 AKKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGdKEAEQKFKEINEAYEILSDPQKRAQYDQFGHAAFDPGGFGQ 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929  80 GGPSSNSFTYQFHGDPRATFAQFFGNSnpFASFFDMGDNLFD---KKVFDL--DTEPDFFSSPFG----------GIGSR 144
Cdd:PRK14277  83 GGFGQGGFGGGGFDFDFGGFGDIFEDI--FGDFFGTGRRRAEtgpQKGADIryDLELTFEEAAFGtekeieverfEKCDV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 145 HGlGSGFRPSFRSHSFNV-HTPFKKEQKQDPPVEHDLYVTLEEIYHGCVKKMKISRRIVQADGSSRKEEKfLAISIKPGW 223
Cdd:PRK14277 161 CK-GSGAKPGSKPVTCPVcHGTGQVRTRQNTPFGRIVNIRTCDRCHGEGKIITDPCNKCGGTGRIRRRRK-IKVNIPAGI 238
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 224 KSGTKVTFQKEGDQA-PGKIPADIVFIIRDKPHAMFKREGSDLRYTARLTLKQALCGVVFQVPTMSGdKLRIsTMQEIIK 302
Cdd:PRK14277 239 DDGQMITLRGEGEPGiKGGPNGDLYIVIKVKPHPLFKREGYNVYLEMPITFTDAALGGEIEIPTLDG-KVKF-TIPEGTQ 316
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*.
gi 386768929 303 PNTVKRIQGYGLPFPKDTTRkGDLLVAFDIQFPEKLTAAQKEVLKD 348
Cdd:PRK14277 317 TGTKFRLRGKGIPHLRGRGR-GDQIVKVYIEVPKKLTEKQKELLRE 361
PRK14281 PRK14281
chaperone protein DnaJ; Provisional
1-349 4.75e-50

chaperone protein DnaJ; Provisional


Pssm-ID: 237657 [Multi-domain]  Cd Length: 397  Bit Score: 171.91  E-value: 4.75e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929   1 MGKDYYKILGLPKTATDDEIKKAYRKLALRYHPDKNKA-ANAEDKFKEVAEAYEVLSDKSKREVYDKYGEDGLKSGGTRN 79
Cdd:PRK14281   1 MKRDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDnKEAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGVGSSAASG 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929  80 GGPSSNSFTYQFhgdpratfaqffgnSNPFASFFDMgdnlfdkkvfdldtepdfFSspfGGIGSRHGLGSGFRPSF---- 155
Cdd:PRK14281  81 GGPGYGGGGGDF--------------NDIFSAFNDM------------------FG---GGARRGGGSPFGFEDVFgggg 125
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 156 --RSHSFNVH-TPFKKEQKqdppvehdlyVTLEEIYHGCVKKMKISRRIV--------------------QADGSSRKEE 212
Cdd:PRK14281 126 rrRRASAGIPgTDLKIRLK----------LTLEEIAKGVEKTLKIKKQVPckecngtgsktgatetcptcHGSGEVRQAS 195
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 213 K-----FLAISIKP----------------------------------GWKSGTKVTFQKEGDQAP-GKIPADIVFIIRD 252
Cdd:PRK14281 196 KtmfgqFVNITACPtcggegrvvkdrcpacygegikqgevtvkvtvpaGVQDGNYLTLRGQGNAGPrGGAPGDLIVVIEE 275
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 253 KPHAMFKREGSDLRYTARLTLKQALCGVVFQVPTMSG-DKLrisTMQEIIKPNTVKRIQGYGLPFPKDTTRkGDLLVAFD 331
Cdd:PRK14281 276 KPHELFVRNGDDVIYNLAVSYPDLVLGTKVEVPTLDGaVKL---TIPAGTQPETMLRIPGKGIGHLRGSGR-GDQYVRVN 351
                        410
                 ....*....|....*...
gi 386768929 332 IQFPEKLTAAQKEVLKDM 349
Cdd:PRK14281 352 VFVPKEVSHQDKELLKEL 369
PRK14298 PRK14298
chaperone protein DnaJ; Provisional
3-349 7.62e-49

chaperone protein DnaJ; Provisional


Pssm-ID: 184612 [Multi-domain]  Cd Length: 377  Bit Score: 168.10  E-value: 7.62e-49
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929   3 KDYYKILGLPKTATDDEIKKAYRKLALRYHPDKNKAANAEDKFKEVAEAYEVLSDKSKREVYDKYGEDGLKS-------- 74
Cdd:PRK14298   5 RDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKEPDAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGIDNqysaedif 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929  75 ----------------GGTRNGGPSSNSFTYQFHGDPRATFAQffgnsnpfASFfdmGDNLfdkkvfDLDTEPDFFSSPF 138
Cdd:PRK14298  85 rgadfggfgdifemffGGGGRRGRMGPRRGSDLRYDLYITLEE--------AAF---GVRK------DIDVPRAERCSTC 147
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 139 GGIGSRHGLGSGFRPSFRSHSFNVHTpfkkeqkQDPPVEHDLYVTLEEIYHGCVKKMKISRRIVQADGSSRKEEKfLAIS 218
Cdd:PRK14298 148 SGTGAKPGTSPKRCPTCGGTGQVTTT-------RSTPLGQFVTTTTCSTCHGRGQVIESPCPVCSGTGKVRKTRK-ITVN 219
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 219 IKPGWKSGTKVTFQKEGDQ-APGKIPADIVFIIRDKPHAMFKREGSDLRYTARLTLKQALCGVVFQVPTMSGD-KLRIST 296
Cdd:PRK14298 220 VPAGADSGLRLKLSGEGEAgSPGAPSGDLYIVLHVKEHDYFERVGDDIISEIPISFTQAALGADIMVPTLYGKvKMNIPP 299
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|...
gi 386768929 297 MQEIikpNTVKRIQGYGLPFpKDTTRKGDLLVAFDIQFPEKLTAAQKEVLKDM 349
Cdd:PRK14298 300 GTQT---HSVFRLKDKGMPR-LHGHGKGDQLVKVIVKTPTKLTQEQKELLREF 348
DnaJ_C cd10747
C-terminal substrate binding domain of DnaJ and HSP40; The C-terminal region of the DnaJ/Hsp40 ...
174-338 2.08e-48

C-terminal substrate binding domain of DnaJ and HSP40; The C-terminal region of the DnaJ/Hsp40 protein mediates oligomerization and binding to denatured polypeptide substrate. DnaJ/Hsp40 is a widely conserved heat-shock protein. It prevents the aggregation of unfolded substrate and forms a ternary complex with both substrate and DnaK/Hsp70; the N-terminal J-domain of DnaJ/Hsp40 stimulates the ATPase activity of DnaK/Hsp70.


Pssm-ID: 199909 [Multi-domain]  Cd Length: 158  Bit Score: 160.28  E-value: 2.08e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 174 PPVEHDLYVTLEEIYHGCVKKMKISRRIVQadgssRKEEKFLAISIKPGWKSGTKVTFQKEGDQAP-GKIPADIVFIIRD 252
Cdd:cd10747    1 ADLRYDLELTLEEAYFGKEKEIKIPRKVTR-----VREKKTLTVKIPAGVDDGQRLRLRGEGDAGPnGGPPGDLYVVIRV 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 253 KPHAMFKREGSDLRYTARLTLKQALCGVVFQVPTMSGD-KLRIstmQEIIKPNTVKRIQGYGLPFPKdTTRKGDLLVAFD 331
Cdd:cd10747   76 KPHPVFRRDGNDLYCEVPISLTEALLGGEIEVPTLGGKvKLKI---PPGTQPGTVLRLKGKGMPRLR-GGGRGDLYVEVK 151

                 ....*..
gi 386768929 332 IQFPEKL 338
Cdd:cd10747  152 VEFPKKL 158
PRK14291 PRK14291
chaperone protein DnaJ; Provisional
1-337 2.65e-48

chaperone protein DnaJ; Provisional


Pssm-ID: 237661 [Multi-domain]  Cd Length: 382  Bit Score: 166.87  E-value: 2.65e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929   1 MGKDYYKILGLPKTATDDEIKKAYRKLALRYHPDKNKAANAEDKFKEVAEAYEVLSDKSKREVYDKYGEDGLKSGGTRNG 80
Cdd:PRK14291   1 AKKDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKNPEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAAFSGSGQQQQ 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929  81 GpssnsftyqfhgdpRATFAQFFGNsnpfasffDMGDNLFDkkVFDldtepDFfssPFGGIGSRHGLGSGFRPSFRShsf 160
Cdd:PRK14291  81 G--------------QEGFSDFGGG--------NIEDILED--VFD-----IF---GFGDIFGRRRATRERRKTYQR--- 125
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 161 nvhtPFKKEqkqdppvehDLY----VTLEEIYHGCVKKMKISRRIV--QADGSSRKEEK-------------------FL 215
Cdd:PRK14291 126 ----PVKGE---------DIYqtveISLEEAYTGTTVSLEVPRYVPceACGGTGYDPGSgekvcptcggsgeiyqrggFF 192
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 216 AIS----------------------------------IKPGWKSGTKVTFQKEGDQAP-GKIPADIVFIIRDKPHAMFKR 260
Cdd:PRK14291 193 RISqtcptcggegvlrepcskcngrglvikketikvrIPPGVDNGSKLRVPGKGHAGRfGGPPGDLYIIVKVKPHPLFER 272
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 261 EGSDLRYTARLTLKQALCGVVFQVPTMSGDKLRIStmqeiIKPNT----VKRIQGYGLPFPKDTTRkGDLLVAFDIQFPE 336
Cdd:PRK14291 273 RGDNLYLDVNITVAEAVLGTELEVPLLDGKKEKVK-----IPPGTkegdKIRVPGKGMPRLKGSGY-GDLVVRVHIDVPK 346

                 .
gi 386768929 337 K 337
Cdd:PRK14291 347 I 347
PRK14286 PRK14286
chaperone protein DnaJ; Provisional
3-348 9.82e-47

chaperone protein DnaJ; Provisional


Pssm-ID: 172774 [Multi-domain]  Cd Length: 372  Bit Score: 162.47  E-value: 9.82e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929   3 KDYYKILGLPKTATDDEIKKAYRKLALRYHPDKNKA-ANAEDKFKEVAEAYEVLSDKSKREVYDKYGEDGLKSGGTRNGG 81
Cdd:PRK14286   4 RSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGnKESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVNAGAGGFGQ 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929  82 PSSNSFTYQFhGDPRATFAQFFGNSNpfASFFDMGDNlfdkkvfdldtepdffSSPFGGIGSRHGLGSGFRPSFRSHSFN 161
Cdd:PRK14286  84 GAYTDFSDIF-GDFGDIFGDFFGGGR--GGGSGGGRR----------------SGPQRGSDLRYNLEVSLEDAALGREYK 144
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 162 VHTPFKK----------EQKQDPPVEHDL-----------YVTLEEIYHGCVKKMKISRRIVQADGSSRKEEKFLAISIK 220
Cdd:PRK14286 145 IEIPRLEscvdcngsgaSKGSSPTTCPDCggsgqirrtqgFFSVATTCPTCRGKGTVISNPCKTCGGQGLQEKRRTINIK 224
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 221 --PGWKSGTKVTFQKEGDQAPGKIP-ADIVFIIRDKPHAMFKREGSDLRYTARLTLKQALCGVVFQVPTMSGDKLRIStM 297
Cdd:PRK14286 225 ipPGVETGSRLKVSGEGEAGPNGGPhGDLYVVTHIKKHELFERQGNDLILVRKISLAQAILGAEIEVPTIDGKKAKMK-I 303
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|.
gi 386768929 298 QEIIKPNTVKRIQGYGLPFpKDTTRKGDLLVAFDIQFPEKLTAAQKEVLKD 348
Cdd:PRK14286 304 PEGTESGQVFRLKGHGMPY-LGAYGKGDQHVIVKIEIPKKITRRQRELIEE 353
PRK14276 PRK14276
chaperone protein DnaJ; Provisional
3-348 5.99e-46

chaperone protein DnaJ; Provisional


Pssm-ID: 237653 [Multi-domain]  Cd Length: 380  Bit Score: 160.64  E-value: 5.99e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929   3 KDYYKILGLPKTATDDEIKKAYRKLALRYHPDKNKAANAEDKFKEVAEAYEVLSDKSKREVYDKYGEDGLKSGGTRNGGP 82
Cdd:PRK14276   4 TEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKEPGAEEKYKEVQEAYETLSDPQKRAAYDQYGAAGANGGFGGGAGG 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929  83 SSNSFTYQFHGDPRATFAQFFG----NSNPFASffDMGDNL-------FDKKVFDLDTEPDFFSSPF----GGIGSRHGL 147
Cdd:PRK14276  84 FGGFDGSGGFGGFEDIFSSFFGgggaRRNPNAP--RQGDDLqyrvnldFEEAIFGKEKEVSYNREATchtcNGSGAKPGT 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 148 ---------GSGFrpsfrshsFNV--HTPFKKEQKQDP-PVEHDLYVTLEEIYHGCvkkmkisrrivqaDGSSRKEEKF- 214
Cdd:PRK14276 162 spvtcgkchGSGV--------ITVdtQTPLGMMRRQVTcDVCHGTGKEIKEPCQTC-------------HGTGHEKQAHt 220
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 215 LAISIKPGWKSGTKVTFQKEGDQAPGKIP-ADIVFIIRDKPHAMFKREGSDLRYTARLTLKQALCGVVFQVPTMSGD-KL 292
Cdd:PRK14276 221 VSVKIPAGVETGQQIRLQGQGEAGFNGGPyGDLYVVFRVEPSKKFERDGSTIYYTLPISFVQAALGDTVEVPTVHGDvEL 300
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 386768929 293 RIStmqEIIKPNTVKRIQGYGLPFPKDTTrKGDLLVAFDIQFPEKLTAAQKEVLKD 348
Cdd:PRK14276 301 KIP---AGTQTGKKFRLRGKGAPKLRGGG-NGDQHVTVNIVTPTKLNDAQKEALKA 352
PRK14299 PRK14299
chaperone protein DnaJ; Provisional
3-349 1.19e-45

chaperone protein DnaJ; Provisional


Pssm-ID: 237667 [Multi-domain]  Cd Length: 291  Bit Score: 157.41  E-value: 1.19e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929   3 KDYYKILGLPKTATDDEIKKAYRKLALRYHPDKNKAANAEDKFKEVAEAYEVLSDKSKREVYDKYGEDGLKSGGtrNGGP 82
Cdd:PRK14299   4 KDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKSPGAEEKFKEINEAYTVLSDPEKRRIYDTYGTTAASAGW--QGPP 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929  83 SSNSFTYQFHGdpratfaqffgnsnpfasfFDMGDnlFDkkvfdldtepDFFSSPFGGIGSRHGLGSGFRPSFRshsfnv 162
Cdd:PRK14299  82 PGPPGGGDFSG-------------------FNVGD--FS----------DFFQQLFGGRGGFGGFGDLFGSVGR------ 124
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 163 htpfKKEQKQDppVEHDLYVTLEEIYHGcvkkmkiSRRIVQADGSSrkeekfLAISIKPGWKSGTKVTFQKEGDQApgki 242
Cdd:PRK14299 125 ----RARKGRD--LEAELPLTLEEAYRG-------GEKVVEVAGER------LSVRIPPGVREGQVIRLAGKGRQG---- 181
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 243 pADIVFIIRDKPHAMFKREGSDLRYTARLTLKQALCGVVFQVPTMSGdklrisTMQEIIKPNTVK----RIQGYGlpFPK 318
Cdd:PRK14299 182 -GDLYLVVRLLPHPVFRLEGDDLYATVDVPAPIAVVGGKVRVMTLDG------PVEVTIPPRTQAgrklRLKGKG--WPR 252
                        330       340       350
                 ....*....|....*....|....*....|.
gi 386768929 319 DTTRKGDLLVAFDIQFPEKLTAAQKEVLKDM 349
Cdd:PRK14299 253 GPAGRGDQYAEVRITIPTRPTPEEERLYKQL 283
PRK14284 PRK14284
chaperone protein DnaJ; Provisional
4-347 1.44e-45

chaperone protein DnaJ; Provisional


Pssm-ID: 237658 [Multi-domain]  Cd Length: 391  Bit Score: 160.01  E-value: 1.44e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929   4 DYYKILGLPKTATDDEIKKAYRKLALRYHPDKNKA-ANAEDKFKEVAEAYEVLSDKSKREVYDKYGEDGLKSGGTRNGGP 82
Cdd:PRK14284   2 DYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGdAEAEKRFKEVSEAYEVLSDAQKRESYDRYGKDGPFAGAGGFGGA 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929  83 SSNSFTyqfhgDPRATFAQFFGNsnpfasffDMGDNlfdkkvfdldtePDFFSSPFGGIGSRHGLGSGFRPSFRSHSFNV 162
Cdd:PRK14284  82 GMGNME-----DALRTFMGAFGG--------EFGGG------------GSFFEGLFGGLGEAFGMRGGPAGARQGASKKV 136
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 163 HTPFKKEQKQDpPVEHDLYVTLEEIYHGC-------------VKKMKISRRIVQADG----------------------- 206
Cdd:PRK14284 137 HITLSFEEAAK-GVEKELLVSGYKSCDACsgsganssqgikvCDRCKGSGQVVQSRGffsmastcpecggegrvitdpcs 215
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 207 -----SSRKEEKFLAISIKPGWKSGTKVTFQKEGDQAPGKIPA-DIVFIIRDKPHAMFKREGSDLRYTARLTLKQALCGV 280
Cdd:PRK14284 216 vcrgqGRIKDKRSVHVHIPAGVDSGMRLKMEGYGDAGQNGAPAgDLYVFIDVEPHPVFERRGDDLILELPIGFVDAALGM 295
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 386768929 281 VFQVPTMSGDKLRISTMQEIIKPNTVKRIQGYGLPFPKDTTRkGDLLVAFDIQFPEKLTAAQKEVLK 347
Cdd:PRK14284 296 KKEIPTLLKEGTCRLTIPEGIQSGTILKVRGQGFPNVHGKGR-GDLLVRISVETPQNLSEEQKELLR 361
PRK14289 PRK14289
molecular chaperone DnaJ;
3-349 3.84e-45

molecular chaperone DnaJ;


Pssm-ID: 237660 [Multi-domain]  Cd Length: 386  Bit Score: 158.84  E-value: 3.84e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929   3 KDYYKILGLPKTATDDEIKKAYRKLALRYHPDKNKA-ANAEDKFKEVAEAYEVLSDKSKREVYDKYGEDGLkSGGTRNGG 81
Cdd:PRK14289   5 RDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGdKEAEEKFKEAAEAYDVLSDPDKRSRYDQFGHAGV-GGAAGGGG 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929  82 PSSNSFTYQfhgDPRATFAQFFGNsnpfasffdmgdnlfdkkvfdldtepdfFSSPFGGIGSRHGlGSGFRPSFRSHSFN 161
Cdd:PRK14289  84 FSGEGMSME---DIFSMFGDIFGG----------------------------HGGGFGGFGGFGG-GGSQQRVFRGSDLR 131
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 162 VHtpfkkeqkqdppvehdLYVTLEEIYHGCVKKMKISRRIV-------QADGSSRKE----------------------- 211
Cdd:PRK14289 132 VK----------------VKLNLKEISTGVEKKFKVKKYVPcshchgtGAEGNNGSEtcptckgsgsvtrvqntilgtmq 195
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 212 ------------------------------EKFLAISIKPGWKSGTKVTFQKEGDQAP-GKIPADIVFIIRDKPHAMFKR 260
Cdd:PRK14289 196 tqstcptcngegkiikkkckkcggegivygEEVITVKIPAGVAEGMQLSMNGKGNAGKhGGVNGDLLVVIEEEPHPELIR 275
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 261 EGSDLRYTARLTLKQALCGVVFQVPTMSGD-KLRISTMQEiikPNTVKRIQGYGLPfPKDTTRKGDLLVAFDIQFPEKLT 339
Cdd:PRK14289 276 DENDLIYNLLLSVPTAALGGAVEVPTIDGKaKVKIEAGTQ---PGKVLRLRNKGLP-SVNGYGTGDLLVNVSVYIPETLS 351
                        410
                 ....*....|
gi 386768929 340 AAQKEVLKDM 349
Cdd:PRK14289 352 KEEKQTLEKM 361
PRK14280 PRK14280
molecular chaperone DnaJ;
1-348 1.20e-43

molecular chaperone DnaJ;


Pssm-ID: 237656 [Multi-domain]  Cd Length: 376  Bit Score: 154.49  E-value: 1.20e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929   1 MGK-DYYKILGLPKTATDDEIKKAYRKLALRYHPDKNKAANAEDKFKEVAEAYEVLSDKSKREVYDKYGEDGLKSGGTRN 79
Cdd:PRK14280   1 MAKrDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDQKRAQYDQFGHAGPNQGFGGG 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929  80 GGPSSNsftyqfhgdpratFAQFFGNSNPFASFFDMGDNLFD----KKVFDLD--TEPDFFSSPFGG-----------IG 142
Cdd:PRK14280  81 GFGGGD-------------FGGGFGFEDIFSSFFGGGGRRRDpnapRQGADLQytMTLTFEEAVFGKekeieipkeetCD 147
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 143 SRHGLGS--GFRPSFRSH-----SFNV--HTPFKKEQKQDPPveHDLYVTLEEIYHGCvkkmkisrRIVQADGSSRKEEK 213
Cdd:PRK14280 148 TCHGSGAkpGTSKETCSHcggsgQVSVeqNTPFGRVVNRQTC--PHCNGTGQEIKEKC--------PTCHGKGKVRKRKK 217
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 214 fLAISIKPGWKSGTKVTFQKEGDQA-PGKIPADIVFIIRDKPHAMFKREGSDLRYTARLTLKQALCGVVFQVPTMSGD-K 291
Cdd:PRK14280 218 -INVKIPAGVDNGQQIRVSGEGEPGvNGGPAGDLYVVFRVRPHEFFERDGDDIYCEMPLTFAQAALGDEIEVPTLHGKvK 296
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 386768929 292 LRI-----STMQEIIKPNTVKRIQGYGlpfpkdttrKGDLLVAFDIQFPEKLTAAQKEVLKD 348
Cdd:PRK14280 297 LKIpagtqTGTQFRLKGKGVPNVRGYG---------QGDQYVVVRVVTPTKLTDRQKELLRE 349
PRK14295 PRK14295
molecular chaperone DnaJ;
3-347 1.83e-43

molecular chaperone DnaJ;


Pssm-ID: 237665 [Multi-domain]  Cd Length: 389  Bit Score: 154.24  E-value: 1.83e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929   3 KDYYKILGLPKTATDDEIKKAYRKLALRYHPDKNKA-ANAEDKFKEVAEAYEVLSDKSKREVYDK----YGEDGLKSGGt 77
Cdd:PRK14295   9 KDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGdAKAEERFKEISEAYDVLSDEKKRKEYDEarslFGNGGFRPGP- 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929  78 rnGGPSSNSFTYQFhGDpratfaqFFGNSNPFASFFDMGDNLfdkkvfdldtePDFFSSPFGGIG----SRHG--LGSGF 151
Cdd:PRK14295  88 --GGGGGGGFNFDL-GD-------LFGGGAQGGGGAGGGGGL-----------GDVFGGLFNRGGrrtqPRRGadVESEV 146
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 152 RPSFRSHSFNVHTPFKKEQKQDPPVEH---DLYVTLEEIYHGCVKKMKISR----------------RIVQAD------- 205
Cdd:PRK14295 147 TLSFTEAIDGATVPLRLTSQAPCPACSgtgAKNGTTPRVCPTCSGTGQVSRnsggfslsepcpdckgRGLIADdpclvck 226
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 206 GSSR-KEEKFLAISIKPGWKSGTKVTFQKEGdqAPGKI--PA-DIVFIIRDKPHAMFKREGSDLRYTARLTLKQALCGVV 281
Cdd:PRK14295 227 GSGRaKSSRTMQVRIPAGVSDGQRIRLRGKG--APGERggPAgDLYVVVHVDPHPVFGRSGDNLTVTVPVTFPEAALGAE 304
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 282 FQVPTMSGDKLRIStmqeiIKPNT----VKRIQGYGLPfPKDTTRkGDLLVAFDIQFPEKLTAAQKEVLK 347
Cdd:PRK14295 305 VRVPTLGGPPVTVK-----LPPGTpngrVLRVRGKGAV-RKDGTR-GDLLVTVEVAVPKDLSGKAREALE 367
PRK14293 PRK14293
molecular chaperone DnaJ;
1-349 1.77e-42

molecular chaperone DnaJ;


Pssm-ID: 237663 [Multi-domain]  Cd Length: 374  Bit Score: 151.30  E-value: 1.77e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929   1 MGKDYYKILGLPKTATDDEIKKAYRKLALRYHPDKNKAANAEDKFKEVAEAYEVLSDKSKREVYDKYGEDGLkSGGtrnG 80
Cdd:PRK14293   1 MAADYYEILGVSRDADKDELKRAYRRLARKYHPDVNKEPGAEDRFKEINRAYEVLSDPETRARYDQFGEAGV-SGA---A 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929  81 GPSSNSFTYQFhGDPRATFAQFFGNSNPFASFF-----DMGDNL-FDKKVfdldtepDFFSSPFGG---IGSRHgL---- 147
Cdd:PRK14293  77 GFPDMGDMGGF-ADIFETFFSGFGGAGGQGGRRrrrgpQRGDDLrYDLKL-------DFREAIFGGekeIRIPH-Letce 147
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 148 ---GSGFRPSFRSHSFN-----------VHTPFKK-EQKQDPPVEHDLYVTLEEIYHGCvkkmkisrrivqaDGSSRKEE 212
Cdd:PRK14293 148 tcrGSGAKPGTGPTTCStcggagqvrraTRTPFGSfTQVSECPTCNGTGQVIEDPCDAC-------------GGQGVKQV 214
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 213 -KFLAISIKPGWKSGTKVTFQKEGDQAP-GKIPADIVFIIRDKPHAMFKREGSDLRYTARLTLKQALCGVVFQVPTMSGD 290
Cdd:PRK14293 215 tKKLKINIPAGVDTGTRLRVSGEGDAGLrGGPPGDLYVYLFVKNDPEFRRDGINILSEIKISYLQAILGDTLEVDTVDGP 294
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 386768929 291 klristmQEII-----KPNTVKRIQGYGLPFPKDTTRKGDLLVAFDIQFPEKLTAAQKEVLKDM 349
Cdd:PRK14293 295 -------VELTipagtQPNTVLTLENKGVPRLGNPVARGDHLITVKVKIPTRISDEERELLEKL 351
PRK14301 PRK14301
chaperone protein DnaJ; Provisional
1-348 4.92e-42

chaperone protein DnaJ; Provisional


Pssm-ID: 237668 [Multi-domain]  Cd Length: 373  Bit Score: 150.28  E-value: 4.92e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929   1 MGKDYYKILGLPKTATDDEIKKAYRKLALRYHPDKNKA-ANAEDKFKEVAEAYEVLSDKSKREVYDKYGEDGLKSGGTrn 79
Cdd:PRK14301   2 SQRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDnPEAEQKFKEAAEAYEVLRDAEKRARYDRFGHAGVNGNGG-- 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929  80 ggpssnsftyqFHGdpratfaqFFGNSNPFASFFDMGDNLFDkkvfdldtepdfFSSPFGGIGSRHGLGSGFRpsfrshs 159
Cdd:PRK14301  80 -----------FGG--------FSSAEDIFSHFSDIFGDLFG------------FSGGGSRRGPRPQAGSDLR------- 121
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 160 FNVHTPFKKEQKQDppvEHDLYVTLEEIYHGC-------------VKKMKISRRIVQADGSSR----------------- 209
Cdd:PRK14301 122 YNLTVSFRQAAKGD---EVTLRIPKNVTCDDCggsgaapgtspetCRHCGGSGQVRQSQGFFQiavpcpvcrgegrvith 198
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 210 -----------KEEKFLAISIKPGWKSGTKVTFQKEGDQAP-GKIPADIVFIIRDKPHAMFKREGSDLRYTARLTLKQAL 277
Cdd:PRK14301 199 pcpkckgsgivQQTRELKVRIPAGVDTGSRLRLRGEGEPGVhGGPPGDLYVVITVEDDKIFQRQGQDLVVTQEISFVQAA 278
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 386768929 278 CGVVFQVPTMSGDklriSTMqEIIK---PNTVKRIQGYGLPFPkDTTRKGDLLVAFDIQFPEKLTAAQKEVLKD 348
Cdd:PRK14301 279 LGDRIEVPTLDDP----VTL-DIPKgtqSGEVFRLRGKGLPYL-GSSQKGDLLVEVSVVTPTKLTKRQEELLRE 346
PRK14283 PRK14283
chaperone protein DnaJ; Provisional
3-348 6.17e-42

chaperone protein DnaJ; Provisional


Pssm-ID: 184604 [Multi-domain]  Cd Length: 378  Bit Score: 149.97  E-value: 6.17e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929   3 KDYYKILGLPKTATDDEIKKAYRKLALRYHPDKNKAANAEDKFKEVAEAYEVLSDKSKREVYDKYGEDGLKSggtrnggp 82
Cdd:PRK14283   5 RDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEEEGAEEKFKEISEAYAVLSDDEKRQRYDQFGHAGMDG-------- 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929  83 ssnsftyqfhgdpratFAQ--FFGNSN---PFASF-FDMGDnlfdkkVFDLdtepdffsSPFGGiGSRHGLGSGfrpsfr 156
Cdd:PRK14283  77 ----------------FSQedIFNNINfedIFQGFgFGIGN------IFDM--------FGFGG-GSRHGPQRG------ 119
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 157 shsfnvhtpfkkeqkQDppVEHDLYVTLEEIYHGCVKKMKISRRIV-------------------QADGSSR-------- 209
Cdd:PRK14283 120 ---------------AD--IYTEVEITLEEAASGVEKDIKVRHTKKcpvcngsraepgsevktcpTCGGTGQvkqvrnti 182
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 210 ---------------------------------KEEKFLAISIKPGWKSGTKVTFQKEGDQA-PGKIPADIVFIIRDKPH 255
Cdd:PRK14283 183 lgqmmnvttcpdcqgegkivekpcsnchgkgvvRETKTISVKIPAGVETGSRLRVSGEGEMGdRGGEPGDLYVVIKVKPH 262
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 256 AMFKREGSDLRYTARLTLKQALCGVVFQVPTMSGD-KLRISTMQEiikPNTVKRIQGYGLPFPKDTTrKGDLLVAFDIQF 334
Cdd:PRK14283 263 KIFRREGANLYYEKPISFVQAALGDTVDVPTIDGPvELKIPAGTQ---SGTTFRLKGHGMPSLRWSG-KGNLYVKVKVVV 338
                        410
                 ....*....|....
gi 386768929 335 PEKLTAAQKEVLKD 348
Cdd:PRK14283 339 PKKLSPKQKELLRE 352
PRK14294 PRK14294
chaperone protein DnaJ; Provisional
3-348 1.55e-40

chaperone protein DnaJ; Provisional


Pssm-ID: 237664 [Multi-domain]  Cd Length: 366  Bit Score: 146.06  E-value: 1.55e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929   3 KDYYKILGLPKTATDDEIKKAYRKLALRYHPDKNKA-ANAEDKFKEVAEAYEVLSDKSKREVYDKYGEDGLKSGGTRNGG 81
Cdd:PRK14294   4 RDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGdKEAEELFKEAAEAYEVLSDPKKRGIYDQYGHEGLSGTGFSGFS 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929  82 PSSNSFTyQFhGDpraTFAQFFGNSNPF----ASFFDMGDNL-------FDKKVFDLDTEPDFFSSPFGGIGSRHGLGSG 150
Cdd:PRK14294  84 GFDDIFS-SF-GD---IFEDFFGFGGGRrgrsRTAVRAGADLrydltlpFLEAAFGTEKEIRIQKLETCEECHGSGCEPG 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 151 FRPSFRSHSfnvhtpfkkeQKQDPPVEHDLYVTLEEIYHGCVKKMK-ISRRIVQADGSSRKE-EKFLAISIKPGWKSGTK 228
Cdd:PRK14294 159 TSPTTCPQC----------GGSGQVTQSQGFFSIRTTCPRCRGMGKvIVSPCKTCHGQGRVRvSKTVQVKIPAGVDTGSR 228
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 229 VTFQKEGDQA-PGKIPADIVFIIRDKPHAMFKREGSDLRYTARLTLKQALCGVVFQVPTMSGD-KLRIstmQEIIKPNTV 306
Cdd:PRK14294 229 LRLRGEGEAGvRGGPPGDLYVFLTVEPHEFFERDGNDVHCKVPISFVQAALGAQIEVPTLEGErELKI---PKGTQPGDI 305
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|..
gi 386768929 307 KRIQGYGLPFPKDTTRkGDLLVAFDIQFPEKLTAAQKEVLKD 348
Cdd:PRK14294 306 FRFKGKGIPSLRGGGR-GDQIIEVEVKVPTRLTKKQEELLTE 346
DnaJ_C pfam01556
DnaJ C terminal domain; This family consists of the C terminal region of the DnaJ protein. It ...
176-335 2.71e-40

DnaJ C terminal domain; This family consists of the C terminal region of the DnaJ protein. It is always found associated with pfam00226 and pfam00684. DnaJ is a chaperone associated with the Hsp70 heat-shock system involved in protein folding and renaturation after stress. The two C-terminal domains CTDI and CTDII, both incorporated in this family are necessary for maintaining the J-domains in their specific relative positions. Structural analysis of PDB:1nlt shows that PF00684 is nested within this DnaJ C-terminal region.


Pssm-ID: 460251 [Multi-domain]  Cd Length: 213  Bit Score: 140.85  E-value: 2.71e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929  176 VEHDLYVTLEEIYHGCVKKMKISRRIVQAD-------------------------------------------------- 205
Cdd:pfam01556   1 LEYELELTLEEAYFGCTKKIKITRNVICDTcggsgakpgtspktcpccggggqvrrqfgffstctccpccggggkiidkc 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929  206 -----GSSRKEEKFLAISIKPGWKSGTKVTFQKEGDQAP-GKIPADIVFIIRDKPHAMFKREGSDLRYTARLTLKQALCG 279
Cdd:pfam01556  81 ckccgGGGVVEKKTLEVKIPAGVDDGQRIRLRGEGDAGEnGGPPGDLYVVIRVKPHPVFRRDGDDLYCTVPISLTEALLG 160
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 386768929  280 VVFQVPTMSGD-KLRIstmQEIIKPNTVKRIQGYGLPFPKDTTRkGDLLVAFDIQFP 335
Cdd:pfam01556 161 GTIEVPTLDGKvKLKI---PAGTQPGTVLRLKGKGMPRLKGGGR-GDLYVTVKVEVP 213
PRK14278 PRK14278
chaperone protein DnaJ; Provisional
1-349 8.51e-39

chaperone protein DnaJ; Provisional


Pssm-ID: 237654 [Multi-domain]  Cd Length: 378  Bit Score: 141.73  E-value: 8.51e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929   1 MGKDYYKILGLPKTATDDEIKKAYRKLALRYHPDKNKAANAEDKFKEVAEAYEVLSDKSKREVYDkYGEDGLKSGGTRNG 80
Cdd:PRK14278   1 MARDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPDEEAQEKFKEISVAYEVLSDPEKRRIVD-LGGDPLESAGGGGG 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929  81 GpssnsftyqfhgdpratFAQFFGNsnpfasffdMGDnlfdkkVFDldtepDFFSspfGGIGSRhGLGSGFRPSfrshsf 160
Cdd:PRK14278  80 G-----------------FGGGFGG---------LGD------VFE-----AFFG---GGAASR-GPRGRVRPG------ 112
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 161 nvhtpfkkeqkQDPPVEhdLYVTLEEIYHGCVKKMKISRRI------------------------------VQ------- 203
Cdd:PRK14278 113 -----------SDSLLR--MRLDLEECATGVTKQVTVDTAVlcdrchgkgtagdskpvtcdtcggrgevqtVQrsflgqv 179
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 204 ------------------------ADGSSRKEEKfLAISIKPGWKSGTKVTFQKEGDQAPGKIPADIVFI-IRDKPHAMF 258
Cdd:PRK14278 180 mtsrpcptcrgvgevipdpchecaGDGRVRARRE-ITVKIPAGVGDGMRIRLAAQGEVGPGGGPAGDLYVeVHEQPHDVF 258
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 259 KREGSDLRYTARLTLKQALCGVVFQVPTMSGDKLRIsTMQEIIKPNTVKRIQGYGLPFPKDTTRkGDLLVAFDIQFPEKL 338
Cdd:PRK14278 259 VRDGDDLHCTVSVPMVDAALGTTVTVEAILDGPSEI-TIPPGTQPGSVITLRGRGMPHLRSGGR-GDLHAHVEVVVPTRL 336
                        410
                 ....*....|.
gi 386768929 339 TAAQKEVLKDM 349
Cdd:PRK14278 337 DHEDIELLREL 347
PRK14297 PRK14297
molecular chaperone DnaJ;
3-350 6.76e-38

molecular chaperone DnaJ;


Pssm-ID: 184611 [Multi-domain]  Cd Length: 380  Bit Score: 139.15  E-value: 6.76e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929   3 KDYYKILGLPKTATDDEIKKAYRKLALRYHPDKNKA-ANAEDKFKEVAEAYEVLSDKSKREVYDKYGE-DGLKSGGTRNG 80
Cdd:PRK14297   4 KDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGnKEAEEKFKEINEAYQVLSDPQKKAQYDQFGTaDFNGAGGFGSG 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929  81 GpssnsftyqfhgdpratFAQFfgnsnpfaSFFDMGDnlfdkkvfdldtEPDFFSSPFGGigsrhGLGSGFRPsfrshsf 160
Cdd:PRK14297  84 G-----------------FGGF--------DFSDMGG------------FGDIFDSFFGG-----GFGSSSRR------- 114
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 161 nvhtpfKKEQKQDPPVEHDLYVTLEEIYHGCVKKMKISR------------------------------RI--------- 201
Cdd:PRK14297 115 ------RNGPQRGADIEYTINLTFEEAVFGVEKEISVTRnencetcngtgakpgtspktcdkcggtgqiRVqrntplgsf 188
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 202 ----------------------VQADGSSRKEEKfLAISIKPGWKSGTKVTFQKEGDQ-APGKIPADIVFIIRDKPHAMF 258
Cdd:PRK14297 189 vstttcdkcggsgkviedpcnkCHGKGKVRKNRK-IKVNVPAGVDTGNVIPLRGQGEHgKNGGPTGDLYINIRVAPHKTF 267
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 259 KREGSDLRYTARLTLKQALCGVVFQVPTMSGD-KLRISTMQEiikPNTVKRIQGYGLPFpKDTTRKGDLLVAFDIQFPEK 337
Cdd:PRK14297 268 KRKGFDIYIDKHISFAKAALGTEIKVPTVDGEvKYEVPAGTQ---PGTVFRLKGKGVPR-VNSTGRGNQYVTVIVDIPKK 343
                        410
                 ....*....|...
gi 386768929 338 LTAAQKEVLKDML 350
Cdd:PRK14297 344 LNSKQKEALTMFM 356
PRK14287 PRK14287
chaperone protein DnaJ; Provisional
3-348 9.63e-38

chaperone protein DnaJ; Provisional


Pssm-ID: 237659 [Multi-domain]  Cd Length: 371  Bit Score: 138.60  E-value: 9.63e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929   3 KDYYKILGLPKTATDDEIKKAYRKLALRYHPDKNKAANAEDKFKEVAEAYEVLSDKSKREVYDKYGE----DGLKSGGTR 78
Cdd:PRK14287   4 RDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKAPDAEDKFKEVKEAYDTLSDPQKKAHYDQFGHtdpnQGFGGGGAG 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929  79 NGGPSSNSFTYQFHGDPratfaqffGNSNPFASffDMGDNL-------FDKKVFDLDTEPDFFSSPFGGIGSRHGLGSGF 151
Cdd:PRK14287  84 DFGGFSDIFDMFFGGGG--------GRRNPNAP--RQGADLqytmtleFKEAVFGKETEIEIPREETCGTCHGSGAKPGT 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 152 RPSFRSH-----SFNV--HTPFKKeqkqdppvehdlyVTLEEIYHGCVKKMKISRR---IVQADGSSRKEEKfLAISIKP 221
Cdd:PRK14287 154 KPETCSHcggsgQLNVeqNTPFGR-------------VVNRRVCHHCEGTGKIIKQkcaTCGGKGKVRKRKK-INVKVPA 219
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 222 GWKSGTKVTFQKEGDQ-APGKIPADIVFIIRDKPHAMFKREGSDLRYTARLTLKQALCGVVFQVPTMSGD-KLRISTMQE 299
Cdd:PRK14287 220 GIDHGQQLRVSGQGEAgVNGGPPGDLYVVFNVKPHEFFERDGDDIYCEMPLTFPQVALGDEIEVPTLNGKvKLKIPAGTQ 299
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*....
gi 386768929 300 IikpNTVKRIQGYGLPFPKDTTrKGDLLVAFDIQFPEKLTAAQKEVLKD 348
Cdd:PRK14287 300 T---GTSFRLRGKGVPNVHGRG-QGDQHVQVRVVTPKNLTEKEKELMRE 344
PRK14282 PRK14282
chaperone protein DnaJ; Provisional
3-349 1.21e-37

chaperone protein DnaJ; Provisional


Pssm-ID: 184603 [Multi-domain]  Cd Length: 369  Bit Score: 138.39  E-value: 1.21e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929   3 KDYYKILGLPKTATDDEIKKAYRKLALRYHPDKN--KAANAEDKFKEVAEAYEVLSDKSKREVYDKYGE--DGLKSGGTR 78
Cdd:PRK14282   4 KDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHpeNRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYvgEQPPYQETE 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929  79 NGGpssnsftyQFHGDPRATFAQFFGNsNPFASFFdmGDNL-------FDKKVFDLDTEPDF-FSSPFGGI--------- 141
Cdd:PRK14282  84 SGG--------GFFEDIFKDFENIFNR-DIFDIFF--GERRtqeeqreYARRGEDIRYEIEVtLSDLINGAeipveydry 152
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 142 -------GSRHGLGSGFRPSFRSHSfnvhTPFKKEQKQDPPVehdlYVTLEEIYHGCVKKMKISRRIVQ-ADGSSRKEEK 213
Cdd:PRK14282 153 etcphcgGTGVEPGSGYVTCPKCHG----TGRIREERRSFFG----VFVSERTCERCGGTGKIPGEYCHeCGGSGRIRRR 224
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 214 F-LAISIKPGWKSGTKVTFQKEGDQAPGKIP-ADIVFIIRDKPHAMFKREGSDLRYTARLTLKQALCGVVFQVPTMSGDk 291
Cdd:PRK14282 225 VrTTVKIPAGVEDGTVLRITGGGNAGYYGGPyGDLYVIVRVRPDPRFKRSGSDLIYDVTIDYLQAILGTTVEVPLPEGG- 303
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 386768929 292 lriSTMQEI---IKPNTVKRIQGYGLPFPKdTTRKGDLLVAFDIQFPEKLTAAQKEVLKDM 349
Cdd:PRK14282 304 ---TTMLKIppgTQPETVFRLKGKGLPNMR-YGRRGDLIVNVHVEIPKRLSREERKLLKEL 360
PRK14292 PRK14292
chaperone protein DnaJ; Provisional
4-346 1.14e-36

chaperone protein DnaJ; Provisional


Pssm-ID: 237662 [Multi-domain]  Cd Length: 371  Bit Score: 135.79  E-value: 1.14e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929   4 DYYKILGLPKTATDDEIKKAYRKLALRYHPDKNKAANAEDKFKEVAEAYEVLSDKSKREVYDKYGEdglksgGTRNGGPS 83
Cdd:PRK14292   3 DYYELLGVSRTASADEIKSAYRKLALKYHPDRNKEKGAAEKFAQINEAYAVLSDAEKRAHYDRFGT------APGAGMPG 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929  84 SNSFTyQFHGDPRATFAQFFGNSNPFASFFDMGDNLFDkkvfDLDTEP-----------------DFFSSPFGGIGSRHG 146
Cdd:PRK14292  77 GDPFG-GMGFDPMDIFEQLFGGAGFGGGRGRRGPARGD----DLETEAritleqarageevevevDRLTECEHCHGSRTE 151
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 147 LGSGFRPS---------FRSHSfnvHTPFKKEQKQDP-PVEHDLYVTLEEIYHGCvkkmkisrrivQADGSSRKEEKfLA 216
Cdd:PRK14292 152 PGGKPPKTcptcrgagaVRAQA---RTIFGVVETQQPcPTCRGEGQIITDPCTVC-----------RGRGRTLKAET-VK 216
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 217 ISIKPGWKSGTKVTFQKEGDQAPGKiPADIVFIIRDKPHAMFKREGSDLRYTARLTLKQALCGVVFQVPTMSGDklrist 296
Cdd:PRK14292 217 VKLPRGIDEGYRIRVAGMGNEGPGG-NGDLYVHIEMEPHPELRREQEHLIYEARIGFAKAALGGQITVPTLDGP------ 289
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 386768929 297 mQEI-IKPNT----VKRIQGYGLPFPKDTTrKGDLLVAFDIQFPEKLTAAQKEVL 346
Cdd:PRK14292 290 -QVIeVKPGTqhgdLHRLRGQGMPRLQGAG-TGDLIVEYEIAVPKQLSPEAREAL 342
PRK14300 PRK14300
chaperone protein DnaJ; Provisional
1-349 1.18e-36

chaperone protein DnaJ; Provisional


Pssm-ID: 172788 [Multi-domain]  Cd Length: 372  Bit Score: 135.91  E-value: 1.18e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929   1 MGKDYYKILGLPKTATDDEIKKAYRKLALRYHPDKNKAANAEDKFKEVAEAYEVLSDKSKREVYDKYGEDGLKSGGTRNG 80
Cdd:PRK14300   1 MSQDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTDAKDAEKKFKEINAAYDVLKDEQKRAAYDRFGHDAFQNQQSRGG 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929  81 GPSSNSftyqFHGDPRATFAQFF-------GNSNPFASFFDMGDNLFDkkvFDLDTEPDF--------FSSPFgGIGSRH 145
Cdd:PRK14300  81 GGNHGG----FHPDINDIFGDFFsdfmggsRRSRPTSSKVRGSDLKYN---LTINLEEAFhgieknisFSSEV-KCDTCH 152
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 146 GLGSGFRPSFRSHSFNVHTPFKKEQKQdppvehdlYVTLEEIYHGCVKKMKISRR-IVQADGSSR-KEEKFLAISIKPGW 223
Cdd:PRK14300 153 GSGSEKGETVTTCDACSGVGATRMQQG--------FFTIEQACHKCQGNGQIIKNpCKKCHGMGRyHKQRNLSVNIPAGV 224
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 224 KSGTKVTFQKEGDQA-PGKIPADIVFIIRDKPHAMFKREGSDLRYTARLTLKQALCGVVFQVPTMSGDKLRIsTMQEIIK 302
Cdd:PRK14300 225 ENGTRIRHTGEGEAGiRGGNSGDLYVDIAIKPHDIYKVDGANLHCKLPISFVNAALGGEIEVPVIEGGKVNL-TIPAGTQ 303
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*..
gi 386768929 303 PNTVKRIQGYGLPFPKDTTRkGDLLVAFDIQFPEKLTAAQKEVLKDM 349
Cdd:PRK14300 304 NGDQLRLRSKGMSKMRSTIR-GDMLTHIHVEVPKNLSKRQRELLEEF 349
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
4-82 9.74e-35

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 124.04  E-value: 9.74e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929   4 DYYKILGLPKTATDDEIKKAYRKLALRYHPDKNKA-ANAEDKFKEVAEAYEVLSDKSKREVYDKYGEDGLKSGGTRNGGP 82
Cdd:COG0484    1 DYYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGdPEAEEKFKEINEAYEVLSDPEKRAAYDRFGHAAELLLATELAES 80
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
4-65 1.06e-34

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 121.43  E-value: 1.06e-34
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 386768929    4 DYYKILGLPKTATDDEIKKAYRKLALRYHPDKN-KAANAEDKFKEVAEAYEVLSDKSKREVYD 65
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNpGDPEAEEKFKEINEAYEVLSDPEKRAIYD 63
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
3-134 3.78e-34

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 130.33  E-value: 3.78e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929   3 KDYYKILGLPKTATDDEIKKAYRKLALRYHPDKNKAANAEDKFKEVAEAYEVLSDKSKREVYDKYGEDGL-KSGGtrngg 81
Cdd:NF037946   5 RDYYEVLGVDRDADDQEIKKAFRKLAKKYHPDRNKAPDAAEIFAEINEAYEVLSNPEKRANYDKYGHDGVdGEGG----- 79
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|...
gi 386768929  82 pssnsftyqFHGDPRATFAQFFGNSNPFASFFdmgDNLFDKKVFDLDTEPDFF 134
Cdd:NF037946  80 ---------FGFDAFDVFSSFFETINKSGAFL---DDSVDESVSADDDLDRLF 120
PRK14290 PRK14290
chaperone protein DnaJ; Provisional
1-349 3.39e-33

chaperone protein DnaJ; Provisional


Pssm-ID: 172778 [Multi-domain]  Cd Length: 365  Bit Score: 126.20  E-value: 3.39e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929   1 MGKDYYKILGLPKTATDDEIKKAYRKLALRYHPDKN--KAANAEDKFKEVAEAYEVLSDKSKREVYDKYGEDGLKSGGTr 78
Cdd:PRK14290   1 MAKDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHpgNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTVDFGAGGS- 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929  79 ngGPSSNSFTYqfHGDPRATFAQFFGNSnpFASffdmgdnlfdkkvfdldtepDFFSspfggigsrhglGSGFRPSFRSH 158
Cdd:PRK14290  80 --NFNWDNFTH--FSDINDIFNQIFGGN--FGS--------------------DFFS------------GFGNQQSTRNI 121
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 159 SFNVHTpfkkeqkqdppvehDLYVTLEEIYHGCVKKMKISR-----------------------------RIVQADGSSR 209
Cdd:PRK14290 122 DLDIYT--------------NLDISLEDAYYGTEKRIKYRRnamcpdcsgtgakngklitcptchgtgqqRIVRGQGFFR 187
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 210 ----------------KEEKF--------------LAISIKPGWKSGTKVTFQKEGdQAPGKIPADIVFIIRDKPHAMFK 259
Cdd:PRK14290 188 mvtvttcrtcggrgriPEEKCprcngtgtvvvnedISVKIPKGATDNLRLRVKGKG-QSYGGRTGDLYVVLRVNNDPNIQ 266
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 260 REGSDLRYTARLTLKQALCGVVFQVPTMSGD-KLRIStmqEIIKPNTVKRIQGYGLPFpKDTTRKGDLLVAFDIQFPEKL 338
Cdd:PRK14290 267 RINDDLYVDQKINFPQAALGGEIEIKLFREKyNLKIP---EGTQPGEVLKIKGAGMPH-LNGHGSGDLLVRINVEVPKRL 342
                        410
                 ....*....|.
gi 386768929 339 TAAQKEVLKDM 349
Cdd:PRK14290 343 TSKQKELIREF 353
PRK10266 PRK10266
curved DNA-binding protein;
3-337 1.52e-32

curved DNA-binding protein;


Pssm-ID: 182347 [Multi-domain]  Cd Length: 306  Bit Score: 123.39  E-value: 1.52e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929   3 KDYYKILGLPKTATDDEIKKAYRKLALRYHPDKNKAANAEDKFKEVAEAYEVLSDKSKREVYDKYgedglksggtrnggp 82
Cdd:PRK10266   4 KDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQL--------------- 68
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929  83 ssnsftYQFHGDPRatFAQFFGNSNpfASFFDMGDnlFDkkvfdldtepDFFSSPFGgigsRHGLGSGFRPSFRSHSfnv 162
Cdd:PRK10266  69 ------WQHRNDPQ--FNRQFQHGD--GQSFNAED--FD----------DIFSSIFG----QHARQSRQRPAARGHD--- 119
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 163 htpfkkeqkqdppVEHDLYVTLEEIYHGCVKKMKISRRIVQADGSSRKE-EKFLAISIKPGWKSGTKVTFQKEGdqAPGK 241
Cdd:PRK10266 120 -------------IEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEiPKTLNVKIPAGVGNGQRIRLKGQG--TPGE 184
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 242 IPA---DIVFIIRDKPHAMFKREGSDLRYTARLTLKQALCGVVFQVPTMSGDKLRisTMQEIIKPNTVKRIQGYGLPFPK 318
Cdd:PRK10266 185 NGGpngDLWLVIHIAPHPLFDIVGQDLEIVVPLAPWEAALGAKVTVPTLKESILL--TIPPGSQAGQRLRVKGKGLVSKK 262
                        330
                 ....*....|....*....
gi 386768929 319 DTtrkGDLLVAFDIQFPEK 337
Cdd:PRK10266 263 QT---GDLYAVLKIVMPPK 278
PRK14279 PRK14279
molecular chaperone DnaJ;
3-347 7.37e-32

molecular chaperone DnaJ;


Pssm-ID: 237655 [Multi-domain]  Cd Length: 392  Bit Score: 123.30  E-value: 7.37e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929   3 KDYYKILGLPKTATDDEIKKAYRKLALRYHPDKNKA-ANAEDKFKEVAEAYEVLSDKSKREVYDK---------YGEdGL 72
Cdd:PRK14279   9 KDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGdPAAEERFKAVSEAHDVLSDPAKRKEYDEtrrlfagggFGG-RR 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929  73 KSGGTRNGGPSSNSFTYQFHgdpratFAQFFGNSNPF--ASFFDMGDNLFDK-----------KVFDLDTEP--DFFSSP 137
Cdd:PRK14279  88 FDGGGGFGGFGTGGDGAEFN------LNDLFDAAGRGggGGIGDLFGGLFNRgggsarpsrprRGNDLETETtlDFVEAA 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 138 FG-----------------GIGSRHGL---------GSGFrPSFRSHSFNVHTPFKkeqkqdppvehDLYVTLEEIYHGC 191
Cdd:PRK14279 162 KGvtmplrltspapcttchGSGARPGTspkvcptcnGSGV-ISRNQGAFGFSEPCT-----------DCRGTGSIIEDPC 229
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 192 VKkmkisrriVQADGSSRKeEKFLAISIKPGWKSGTKVTFQKEGDQAPGKIPA-DIVFIIRDKPHAMFKREGSDLRYTAR 270
Cdd:PRK14279 230 EE--------CKGTGVTTR-TRTINVRIPPGVEDGQRIRLAGQGEAGLRGAPSgDLYVTVHVRPDKVFGRDGDDLTVTVP 300
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 271 LTLKQALCGVVFQVPTMSGdKLRIStmqeiIKPNT----VKRIQGYGLpfPKDTTRKGDLLVAFDIQFPEKLTAAQKEVL 346
Cdd:PRK14279 301 VSFTELALGSTLSVPTLDG-PVGVK-----VPAGTadgrILRVRGRGV--PKRSGGAGDLLVTVKVAVPPNLDGAAAEAL 372

                 .
gi 386768929 347 K 347
Cdd:PRK14279 373 E 373
PRK14285 PRK14285
chaperone protein DnaJ; Provisional
1-349 1.96e-30

chaperone protein DnaJ; Provisional


Pssm-ID: 172773 [Multi-domain]  Cd Length: 365  Bit Score: 118.94  E-value: 1.96e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929   1 MGKDYYKILGLPKTATDDEIKKAYRKLALRYHPDKNKA-ANAEDKFKEVAEAYEVLSDKSKREVYDKYGEDGLKSGGTRN 79
Cdd:PRK14285   1 MKRDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGnKEAESIFKEATEAYEVLIDDNKRAQYDRFGHTAFEGGGGFE 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929  80 GgpssnsFTYQFHGdpratfaqffgnsnpFASFF-DMGDnlfdkkVFDldtepDFFSSPFGGIGSRhglgsgfrpsfrsh 158
Cdd:PRK14285  81 G------FSGGFSG---------------FSDIFeDFGD------IFD-----SFFTGNRGQDKNR-------------- 114
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 159 sfnvhtpfKKEQKQDppVEHDLYVTLEEIYHGCVKKMKISR----------------------------RIVQADGSSR- 209
Cdd:PRK14285 115 --------KHEKGQD--LTYQIEISLEDAYLGYKNNINITRnmlcesclgkksekgtspsicnmcngsgRVMQGGGFFRv 184
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 210 ---------------------------KEEKFLAISIKPGWKSGTKVTFQKEGDQAP-GKIPADIVFIIRDKPHAMFKRE 261
Cdd:PRK14285 185 tttcpkcygngkiisnpcksckgkgslKKKETIELKIPAGIDDNQQIKMRGKGSVNPdNQQYGDLYIKILIKPHKIFKRN 264
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 262 GSDLRYTARLTLKQALCGVVFQVPTMSGDKLRISTMQEIIKPNTVKrIQGYGLPFPKdTTRKGDLLVAFDIQFPEKLTAA 341
Cdd:PRK14285 265 GKDLYATLPISFTQAALGKEIKIQTIASKKIKIKIPKGTENDEQII-IKNEGMPILH-TEKFGNLILIIKIKTPKNLNSN 342

                 ....*...
gi 386768929 342 QKEVLKDM 349
Cdd:PRK14285 343 AIKLLENL 350
DnaJ smart00271
DnaJ molecular chaperone homology domain;
3-60 4.19e-27

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 101.54  E-value: 4.19e-27
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929     3 KDYYKILGLPKTATDDEIKKAYRKLALRYHPDKNK--AANAEDKFKEVAEAYEVLSDKSK 60
Cdd:smart00271   1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPgdKEEAEEKFKEINEAYEVLSDPEK 60
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
4-57 5.10e-27

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 101.08  E-value: 5.10e-27
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 386768929   4 DYYKILGLPKTATDDEIKKAYRKLALRYHPDKNKA-ANAEDKFKEVAEAYEVLSD 57
Cdd:cd06257    1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDdPEAEEKFKEINEAYEVLSD 55
SEC63 COG5407
Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular ...
4-62 2.62e-26

Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 444165 [Multi-domain]  Cd Length: 61  Bit Score: 99.30  E-value: 2.62e-26
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929   4 DYYKILGLPKTATDDEIKKAYRKLALRYHPDKNKA-ANAEDKFKEVAEAYEVLSDKSKRE 62
Cdd:COG5407    1 DPYEVLGVAKTASADEIKKAYRKLAKKYHPDRNKGdPKAEERFKEINEAYELLSDAEKRA 60
PRK14296 PRK14296
chaperone protein DnaJ; Provisional
3-349 4.04e-26

chaperone protein DnaJ; Provisional


Pssm-ID: 237666 [Multi-domain]  Cd Length: 372  Bit Score: 106.95  E-value: 4.04e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929   3 KDYYKILGLPKTATDDEIKKAYRKLALRYHPDKNKAANAEDKFKEVAEAYEVLSDKSKREVYDKYGEdglksggtrNGGP 82
Cdd:PRK14296   4 KDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSPDAHDKMVEINEAADVLLDKDKRKQYDQFGH---------AAFD 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929  83 SSNSFTYQFHGdpratFAQFFGN--SNPFASFFDMGDNLFDKKVFD-----------LDTEPDFFSSPFG---------- 139
Cdd:PRK14296  75 GSSGFSSNFGD-----FEDLFSNmgSSGFSSFTNIFSDFFGSNKSDyqrstkgqsvsLDIYLTFKELLFGvdkiieldll 149
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 140 -------GIGSRHglgsgfrPSFRSHSFNVH-TPFKKEQKQDPPVEHDLYVTLeEIYHGCVKKMKISRRIVQADGSSRKE 211
Cdd:PRK14296 150 tncskcfGSGAES-------NSDIHICNNCHgTGEVLVQKNMGFFQFQQSAKC-NVCNGAGKIIKNKCKNCKGKGKYLER 221
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 212 EKfLAISIKPGWKSGTKVTFQKEGDQA-PGKIPADIVFIIRDKPHAMFKREGS-DLRYTARLTLKQALCGVVFQVPTMSG 289
Cdd:PRK14296 222 KK-IEVNIPKGIRPNQQIKLSQKGHASlNNGVNGDLIIDIYLKESKVFEIINNnDILMTYNISYLDAILGNEIIIKTLDG 300
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 386768929 290 D-KLRIStmqEIIKPNTVKRIQGYGLPFPKDTTRKGDLLVAFDIQFPEKLTAAQKEVLKDM 349
Cdd:PRK14296 301 DiKYKLP---KSINSNELIIINNKGLYKSINKDKRGDLIIKVNIVVPKNLSKKEKELIEQI 358
termin_org_DnaJ TIGR03835
terminal organelle assembly protein TopJ; This model describes TopJ (MG_200, CbpA), a DnaJ ...
3-72 8.38e-25

terminal organelle assembly protein TopJ; This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility. [Cellular processes, Chemotaxis and motility]


Pssm-ID: 274808 [Multi-domain]  Cd Length: 871  Bit Score: 105.67  E-value: 8.38e-25
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929    3 KDYYKILGLPKTATDDEIKKAYRKLALRYHPDKNKAANAEDKFKEVAEAYEVLSDKSKREVYDKYGEDGL 72
Cdd:TIGR03835   2 RDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKAPDAASIFAEINEANDVLSNPKKRANYDKYGHDGV 71
CbpA COG2214
Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];
3-65 1.12e-22

Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];


Pssm-ID: 441816 [Multi-domain]  Cd Length: 91  Bit Score: 90.55  E-value: 1.12e-22
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 386768929   3 KDYYKILGLPKTATDDEIKKAYRKLALRYHPDKNKA--ANAEDKFKEVAEAYEVLSDKSKREVYD 65
Cdd:COG2214    5 KDHYAVLGVPPDASLEEIRQAYRRLAKLLHPDRGGElkALAEELFQRLNEAYEVLSDPERRAEYD 69
PRK14288 PRK14288
molecular chaperone DnaJ;
1-349 4.21e-21

molecular chaperone DnaJ;


Pssm-ID: 172776 [Multi-domain]  Cd Length: 369  Bit Score: 92.83  E-value: 4.21e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929   1 MGKDYYKILGLPKTATDDEIKKAYRKLALRYHPDKNKA-ANAEDKFKEVAEAYEVLSDKSKREVYDKYGEDGLKSGGTRn 79
Cdd:PRK14288   1 MELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGdKEAEEKFKLINEAYGVLSDEKKRALYDRYGKKGLNQAGAS- 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929  80 ggpssnsftyqfhgdpRATFAQFFGNsnpFASFFD--MGDNLFDKKVFDLDTEPDFFSSpfggigsrhglgsgFRPSFRS 157
Cdd:PRK14288  80 ----------------QSDFSDFFED---LGSFFEdaFGFGARGSKRQKSSIAPDYLQT--------------IELSFKE 126
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 158 HSFNVHTPFKKEQK-----------QDPPVE-------------HDLYVTLEEIYHGCVKKMKISRRIVQADGSSR---K 210
Cdd:PRK14288 127 AVFGCKKTIKVQYQsvcescdgtgaKDKALEtckqcngqgqvfmRQGFMSFAQTCGACQGKGKIIKTPCQACKGKTyilK 206
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929 211 EEKFLAIsIKPGWKSGTKVTFQKEGDQAPGKIPADIVFIIRDKPHAMFKREGSDLRYTARLTLKQALCGVVFQVPTMSGD 290
Cdd:PRK14288 207 DEEIDAI-IPEGIDDQNRMVLKNKGNEYEKGKRGDLYLEARVKEDEHFKREGCDLFIEAPVFFTTIALGHTIKVPSLKGD 285
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 386768929 291 KLristmqEIIKPNTVKRIQGY-----GLPFPKDTTRkGDLLVAFDIQFPEKLTAAQKEVLKDM 349
Cdd:PRK14288 286 EL------ELKIPRNARDRQTFafrneGVKHPESSYR-GSLIVELQVIYPKSLNKEQQELLEKL 342
DjlA COG1076
DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];
4-57 2.64e-14

DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440694 [Multi-domain]  Cd Length: 75  Bit Score: 67.13  E-value: 2.64e-14
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 386768929   4 DYYKILGLPKTATDDEIKKAYRKLALRYHPDKnKAANAEDKFKEVA--------EAYEVLSD 57
Cdd:COG1076    5 DAFELLGLPPDADDAELKRAYRKLQREHHPDR-LAAGLPEEEQRLAlqkaaainEAYETLKD 65
PTZ00341 PTZ00341
Ring-infected erythrocyte surface antigen; Provisional
5-139 6.09e-14

Ring-infected erythrocyte surface antigen; Provisional


Pssm-ID: 173534 [Multi-domain]  Cd Length: 1136  Bit Score: 73.28  E-value: 6.09e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386768929    5 YYKILGLPKTATDDEIKKAYRKLALRYHPDKNKAANAEDKFKEVAEAYEVLSDKSKREVYDKYGEDGLKSGGTRNGG--- 81
Cdd:PTZ00341  575 FYDILGVGVNADMKEISERYFKLAENYYPPKRSGNEGFHKFKKINEAYQILGDIDKKKMYNKFGYDGIKGVNFIHPSify 654
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 386768929   82 --PSSNSFTYqFHGDPR-ATFAQFFgnsnpfasffdmgdnlFDKK--VFDLDTEPDFFSSPFG 139
Cdd:PTZ00341  655 llASLEKFAD-FTGSPQiVTLLKFF----------------FEKKlsMNDLDNKSEHLLKFME 700
djlA PRK09430
co-chaperone DjlA;
3-61 1.58e-08

co-chaperone DjlA;


Pssm-ID: 236512 [Multi-domain]  Cd Length: 267  Bit Score: 54.82  E-value: 1.58e-08
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 386768929   3 KDYYKILGLPKTATDDEIKKAYRKLALRYHPDKNKA--------ANAEDKFKEVAEAYEVLsdKSKR 61
Cdd:PRK09430 200 EDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAkglppemmEMAKEKAQEIQAAYELI--KKQK 264
ZUO1 COG5269
Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / ...
4-70 9.04e-08

Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 227594 [Multi-domain]  Cd Length: 379  Bit Score: 53.11  E-value: 9.04e-08
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 386768929   4 DYYKILGLPK---TATDDEIKKAYRKLALRYHPDKNKAANAEDK---FKEVAEAYEVLSDKSKREVYDKYGED 70
Cdd:COG5269   44 DLYALLGLSKyrtKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCdefFKLIQKAREVLGDRKLRLQYDSNDFD 116
PHA03102 PHA03102
Small T antigen; Reviewed
7-57 7.73e-05

Small T antigen; Reviewed


Pssm-ID: 222986 [Multi-domain]  Cd Length: 153  Bit Score: 42.35  E-value: 7.73e-05
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|...
gi 386768929   7 KILGLPKTATDDE--IKKAYRKLALRYHPDKnkaANAEDKFKEVAEAYEVLSD 57
Cdd:PHA03102   9 DLLGLPRSAWGNLplMRKAYLRKCLEFHPDK---GGDEEKMKELNTLYKKFRE 58
hscB PRK01356
co-chaperone HscB; Provisional
4-64 7.79e-05

co-chaperone HscB; Provisional


Pssm-ID: 167217 [Multi-domain]  Cd Length: 166  Bit Score: 42.56  E-value: 7.79e-05
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 386768929   4 DYYKILGLPKTATDD--EIKKAYRKLALRYHPDKNKAANAEDKFKEVA----EAYEVLSDKSKREVY 64
Cdd:PRK01356   3 NYFQLLGLPQEYNIDlkILEKQYFAMQVKYHPDKAKTLQEKEQNLIIAselnNAYSTLKDALKRAEY 69
PTZ00100 PTZ00100
DnaJ chaperone protein; Provisional
6-55 1.59e-04

DnaJ chaperone protein; Provisional


Pssm-ID: 240265  Cd Length: 116  Bit Score: 40.60  E-value: 1.59e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|
gi 386768929   6 YKILGLPKTATDDEIKKAYRKLALRYHPDKNKAANAEDKfkeVAEAYEVL 55
Cdd:PTZ00100  68 YKILNISPTASKERIREAHKQLMLRNHPDNGGSTYIASK---VNEAKDLL 114
hscB PRK03578
Fe-S protein assembly co-chaperone HscB;
4-64 1.62e-04

Fe-S protein assembly co-chaperone HscB;


Pssm-ID: 235133 [Multi-domain]  Cd Length: 176  Bit Score: 41.93  E-value: 1.62e-04
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 386768929   4 DYYKILGLP-KTATDDE-IKKAYRKLALRYHPDknKAANAEDKFKEVA--------EAYEVLSDKSKREVY 64
Cdd:PRK03578   7 DHFSLFGLPaRFALDEAaLDAAYRTVQAQVHPD--RFAAAGDAEKRVAmqwatranEAYQTLRDPLKRARY 75
PHA02624 PHA02624
large T antigen; Provisional
9-77 4.44e-04

large T antigen; Provisional


Pssm-ID: 222912 [Multi-domain]  Cd Length: 647  Bit Score: 41.89  E-value: 4.44e-04
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 386768929   9 LGLPKTATDDE--IKKAYRKLALRYHPDKnkaANAEDKFKEVAEAYEVL--SDKSKREVYDKYGEDGLKSGGT 77
Cdd:PHA02624  17 LGLPMAAWGNLplMRKAYLRKCKEYHPDK---GGDEEKMKRLNSLYKKLqeGVKSARQSFGTQDSSEIPTYGT 86
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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