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Conserved domains on  [gi|368711324|ref|NP_001243042|]
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testis development-related protein isoform 2 [Homo sapiens]

Protein Classification

TDRP domain-containing protein( domain architecture ID 11238878)

TDRP domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
TDRP pfam15683
Testis development-related protein; TDRP is a family of proteins found in chordates. It is ...
 41-167 2.63e-81

Testis development-related protein; TDRP is a family of proteins found in chordates. It is predominantly expressed in the testis. distributed in both cytoplasm and the nuclei of spermatogenic cells. It may act as a nuclear factor with an important role in spermatogenesis.


:

Pssm-ID: 464801  Cd Length: 147  Bit Score: 238.17  E-value: 2.63e-81
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 368711324   41 SFRGWKEVTSLFNKDDEQHLLERCKSPKSKGTNLRLKEELKAEKKSGFWDNLVLKQNIQSKKPDEIEGWEPPKLALEDIS 120
Cdd:pfam15683   3 SFRGWKEVTSLFNKDDEQQLLTGVKSPKSKGTNLRLKEELKTEKKSGFWDSLVLKQNTQSKKPDEIEGWEPPQLALEDVA 82

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 368711324  121 ADPEDTVGGHPSWSGWEDDAKGSTKYTSLASSANSSRWSLRAAGRLI 167
Cdd:pfam15683  83 ADAGDAVSDLPSWPGWEDDTKGSSKYTNLASSGNSSRWSLRSAGKLV 129
 
Name Accession Description Interval E-value
TDRP pfam15683
Testis development-related protein; TDRP is a family of proteins found in chordates. It is ...
 41-167 2.63e-81

Testis development-related protein; TDRP is a family of proteins found in chordates. It is predominantly expressed in the testis. distributed in both cytoplasm and the nuclei of spermatogenic cells. It may act as a nuclear factor with an important role in spermatogenesis.


Pssm-ID: 464801  Cd Length: 147  Bit Score: 238.17  E-value: 2.63e-81
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 368711324   41 SFRGWKEVTSLFNKDDEQHLLERCKSPKSKGTNLRLKEELKAEKKSGFWDNLVLKQNIQSKKPDEIEGWEPPKLALEDIS 120
Cdd:pfam15683   3 SFRGWKEVTSLFNKDDEQQLLTGVKSPKSKGTNLRLKEELKTEKKSGFWDSLVLKQNTQSKKPDEIEGWEPPQLALEDVA 82

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 368711324  121 ADPEDTVGGHPSWSGWEDDAKGSTKYTSLASSANSSRWSLRAAGRLI 167
Cdd:pfam15683  83 ADAGDAVSDLPSWPGWEDDTKGSSKYTNLASSGNSSRWSLRSAGKLV 129
 
Name Accession Description Interval E-value
TDRP pfam15683
Testis development-related protein; TDRP is a family of proteins found in chordates. It is ...
 41-167 2.63e-81

Testis development-related protein; TDRP is a family of proteins found in chordates. It is predominantly expressed in the testis. distributed in both cytoplasm and the nuclei of spermatogenic cells. It may act as a nuclear factor with an important role in spermatogenesis.


Pssm-ID: 464801  Cd Length: 147  Bit Score: 238.17  E-value: 2.63e-81
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 368711324   41 SFRGWKEVTSLFNKDDEQHLLERCKSPKSKGTNLRLKEELKAEKKSGFWDNLVLKQNIQSKKPDEIEGWEPPKLALEDIS 120
Cdd:pfam15683   3 SFRGWKEVTSLFNKDDEQQLLTGVKSPKSKGTNLRLKEELKTEKKSGFWDSLVLKQNTQSKKPDEIEGWEPPQLALEDVA 82

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 368711324  121 ADPEDTVGGHPSWSGWEDDAKGSTKYTSLASSANSSRWSLRAAGRLI 167
Cdd:pfam15683  83 ADAGDAVSDLPSWPGWEDDTKGSSKYTNLASSGNSSRWSLRSAGKLV 129
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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