NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|358248301|ref|NP_001239609|]
View 

submaxillary gland androgen regulated protein 2 isoform 2 precursor [Mus musculus]

Protein Classification

PROL5-SMR domain-containing protein( domain architecture ID 11238768)

PROL5-SMR domain-containing protein

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
PROL5-SMR pfam15621
Proline-rich submaxillary gland androgen-regulated family; SMR is a family of proteins found ...
 1-115 3.19e-18

Proline-rich submaxillary gland androgen-regulated family; SMR is a family of proteins found in eukaryotes. The family of SMR proteins is expressed in the submaxillary gland. SMR members may play a role in protection or detoxification.


:

Pssm-ID: 434817 [Multi-domain]  Cd Length: 103  Bit Score: 74.46  E-value: 3.19e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 358248301    1 MKPLCLVFGLCVLIGCFLSSECQRGFRGqHDPTRPLSPsnpsshfyPQPDPNRVQISQPDNIPifmfeqPHSLNICVPPP 80
Cdd:pfam15621   1 MKPLYLVFGLWALIGCFLSGECHRGPRG-HDPRRPLPP--------SQPPPNGPQIGPPPPPP------PYGPGRIPPPP 65

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 358248301   81 PLYLGeeFEKLPPNTHIPYIL--IRPDIEPPSKYIQP 115
Cdd:pfam15621  66 PPPFG--PGRIPPPPPPPYGPgrILSQSFPPPPDPQP 100
 
Name Accession Description Interval E-value
PROL5-SMR pfam15621
Proline-rich submaxillary gland androgen-regulated family; SMR is a family of proteins found ...
 1-115 3.19e-18

Proline-rich submaxillary gland androgen-regulated family; SMR is a family of proteins found in eukaryotes. The family of SMR proteins is expressed in the submaxillary gland. SMR members may play a role in protection or detoxification.


Pssm-ID: 434817 [Multi-domain]  Cd Length: 103  Bit Score: 74.46  E-value: 3.19e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 358248301    1 MKPLCLVFGLCVLIGCFLSSECQRGFRGqHDPTRPLSPsnpsshfyPQPDPNRVQISQPDNIPifmfeqPHSLNICVPPP 80
Cdd:pfam15621   1 MKPLYLVFGLWALIGCFLSGECHRGPRG-HDPRRPLPP--------SQPPPNGPQIGPPPPPP------PYGPGRIPPPP 65

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 358248301   81 PLYLGeeFEKLPPNTHIPYIL--IRPDIEPPSKYIQP 115
Cdd:pfam15621  66 PPPFG--PGRIPPPPPPPYGPgrILSQSFPPPPDPQP 100
 
Name Accession Description Interval E-value
PROL5-SMR pfam15621
Proline-rich submaxillary gland androgen-regulated family; SMR is a family of proteins found ...
 1-115 3.19e-18

Proline-rich submaxillary gland androgen-regulated family; SMR is a family of proteins found in eukaryotes. The family of SMR proteins is expressed in the submaxillary gland. SMR members may play a role in protection or detoxification.


Pssm-ID: 434817 [Multi-domain]  Cd Length: 103  Bit Score: 74.46  E-value: 3.19e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 358248301    1 MKPLCLVFGLCVLIGCFLSSECQRGFRGqHDPTRPLSPsnpsshfyPQPDPNRVQISQPDNIPifmfeqPHSLNICVPPP 80
Cdd:pfam15621   1 MKPLYLVFGLWALIGCFLSGECHRGPRG-HDPRRPLPP--------SQPPPNGPQIGPPPPPP------PYGPGRIPPPP 65

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 358248301   81 PLYLGeeFEKLPPNTHIPYIL--IRPDIEPPSKYIQP 115
Cdd:pfam15621  66 PPPFG--PGRIPPPPPPPYGPgrILSQSFPPPPDPQP 100
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH