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Conserved domains on  [gi|334186830|ref|NP_001190806|]
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UDP-galactose transporter 2 [Arabidopsis thaliana]

Protein Classification

nucleotide-sugar transporter family protein( domain architecture ID 706892)

nucleotide-sugar transporter family protein may mediate the transport of nucleotides or sugars or their derivatives; belongs to the drug/metabolite transporter (DMT) superfamily

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
UAA super family cl26745
UAA transporter family; This family includes transporters with a specificity for ...
 22-359 5.39e-77

UAA transporter family; This family includes transporters with a specificity for UDP-N-acetylglucosamine.


The actual alignment was detected with superfamily member pfam08449:

Pssm-ID: 462479 [Multi-domain]  Cd Length: 307  Bit Score: 240.28  E-value: 5.39e-77
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334186830   22 QFLICTSGFFFGYLVNGVCEEYVYNRLQFSFGWYFTFIQ-GFVYLF-----LIYLQGFTTKHIVNPMRTYVKLSAVLMGS 95
Cdd:pfam08449   1 QFLLAVSGVFGGCCSNGVLQELIMKVEPGPFGNLLTFAQfLFYALEglpesIDIFTSKFLKPRKIPLKTYVILVALFFIT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334186830   96 HGLTKGSLAY-LNYPAQIMFKSTKVLPVMIMGAFIPGlrRKYPVHEYISAFLLVLGLILFTL-------ADAQMSPNFSM 167
Cdd:pfam08449  81 SVLNNEALKYdISYPTHIIFRSSKLIPVMIMGILILG--KRYSKLQYLSAFLVTLGIIIFTLfsakdkvADSVVSPNFFL 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334186830  168 IGIMMITGALIMDAFLGNLQEAIFTMNPETTQmEMLFCSTVVGLPFLFVpmvLTGEVFRAWTACAQSSILSEsdkewnll 247
Cdd:pfam08449 159 IGIAMLSGALLLDAFLGNYQEKTYKKYGKHSK-EMLFYSHLLSLPFFLL---LQGDLFSAVQFCSQSPDKAV-------- 226

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334186830  248 fgfestsidltrfmiqtgvglslekkskfvgFLHPYVYGVLVFEAMATFIGQVSVLSLIALFGAATTALITTARKGVTLL 327
Cdd:pfam08449 227 -------------------------------LSLPSMLFYLLLNVLTQYVCIRGVFILISEFGALTVTLVTTLRKFVSLL 275

                         330       340       350
                  ....*....|....*....|....*....|..
gi 334186830  328 LSYLIFTKPLTEQHGSGLLLIAMGIVLKMVPM 359
Cdd:pfam08449 276 LSILLFGNPFTLQHWVGTLLVFLGTFLYSYSK 307
 
Name Accession Description Interval E-value
UAA pfam08449
UAA transporter family; This family includes transporters with a specificity for ...
 22-359 5.39e-77

UAA transporter family; This family includes transporters with a specificity for UDP-N-acetylglucosamine.


Pssm-ID: 462479 [Multi-domain]  Cd Length: 307  Bit Score: 240.28  E-value: 5.39e-77
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334186830   22 QFLICTSGFFFGYLVNGVCEEYVYNRLQFSFGWYFTFIQ-GFVYLF-----LIYLQGFTTKHIVNPMRTYVKLSAVLMGS 95
Cdd:pfam08449   1 QFLLAVSGVFGGCCSNGVLQELIMKVEPGPFGNLLTFAQfLFYALEglpesIDIFTSKFLKPRKIPLKTYVILVALFFIT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334186830   96 HGLTKGSLAY-LNYPAQIMFKSTKVLPVMIMGAFIPGlrRKYPVHEYISAFLLVLGLILFTL-------ADAQMSPNFSM 167
Cdd:pfam08449  81 SVLNNEALKYdISYPTHIIFRSSKLIPVMIMGILILG--KRYSKLQYLSAFLVTLGIIIFTLfsakdkvADSVVSPNFFL 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334186830  168 IGIMMITGALIMDAFLGNLQEAIFTMNPETTQmEMLFCSTVVGLPFLFVpmvLTGEVFRAWTACAQSSILSEsdkewnll 247
Cdd:pfam08449 159 IGIAMLSGALLLDAFLGNYQEKTYKKYGKHSK-EMLFYSHLLSLPFFLL---LQGDLFSAVQFCSQSPDKAV-------- 226

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334186830  248 fgfestsidltrfmiqtgvglslekkskfvgFLHPYVYGVLVFEAMATFIGQVSVLSLIALFGAATTALITTARKGVTLL 327
Cdd:pfam08449 227 -------------------------------LSLPSMLFYLLLNVLTQYVCIRGVFILISEFGALTVTLVTTLRKFVSLL 275

                         330       340       350
                  ....*....|....*....|....*....|..
gi 334186830  328 LSYLIFTKPLTEQHGSGLLLIAMGIVLKMVPM 359
Cdd:pfam08449 276 LSILLFGNPFTLQHWVGTLLVFLGTFLYSYSK 307
 
Name Accession Description Interval E-value
UAA pfam08449
UAA transporter family; This family includes transporters with a specificity for ...
 22-359 5.39e-77

UAA transporter family; This family includes transporters with a specificity for UDP-N-acetylglucosamine.


Pssm-ID: 462479 [Multi-domain]  Cd Length: 307  Bit Score: 240.28  E-value: 5.39e-77
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334186830   22 QFLICTSGFFFGYLVNGVCEEYVYNRLQFSFGWYFTFIQ-GFVYLF-----LIYLQGFTTKHIVNPMRTYVKLSAVLMGS 95
Cdd:pfam08449   1 QFLLAVSGVFGGCCSNGVLQELIMKVEPGPFGNLLTFAQfLFYALEglpesIDIFTSKFLKPRKIPLKTYVILVALFFIT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334186830   96 HGLTKGSLAY-LNYPAQIMFKSTKVLPVMIMGAFIPGlrRKYPVHEYISAFLLVLGLILFTL-------ADAQMSPNFSM 167
Cdd:pfam08449  81 SVLNNEALKYdISYPTHIIFRSSKLIPVMIMGILILG--KRYSKLQYLSAFLVTLGIIIFTLfsakdkvADSVVSPNFFL 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334186830  168 IGIMMITGALIMDAFLGNLQEAIFTMNPETTQmEMLFCSTVVGLPFLFVpmvLTGEVFRAWTACAQSSILSEsdkewnll 247
Cdd:pfam08449 159 IGIAMLSGALLLDAFLGNYQEKTYKKYGKHSK-EMLFYSHLLSLPFFLL---LQGDLFSAVQFCSQSPDKAV-------- 226

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334186830  248 fgfestsidltrfmiqtgvglslekkskfvgFLHPYVYGVLVFEAMATFIGQVSVLSLIALFGAATTALITTARKGVTLL 327
Cdd:pfam08449 227 -------------------------------LSLPSMLFYLLLNVLTQYVCIRGVFILISEFGALTVTLVTTLRKFVSLL 275

                         330       340       350
                  ....*....|....*....|....*....|..
gi 334186830  328 LSYLIFTKPLTEQHGSGLLLIAMGIVLKMVPM 359
Cdd:pfam08449 276 LSILLFGNPFTLQHWVGTLLVFLGTFLYSYSK 307
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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