TBP-associated factor 4 [Arabidopsis thaliana]
TAF4-like domain-containing protein( domain architecture ID 11192536)
TAF4-like domain-containing protein
List of domain hits
Name | Accession | Description | Interval | E-value | ||||||
TAF4 | pfam05236 | Transcription initiation factor TFIID component TAF4 family; This region of similarity is ... |
537-850 | 6.49e-82 | ||||||
Transcription initiation factor TFIID component TAF4 family; This region of similarity is found in Transcription initiation factor TFIID component TAF4. : Pssm-ID: 461598 [Multi-domain] Cd Length: 264 Bit Score: 263.75 E-value: 6.49e-82
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RST | pfam12174 | RCD1-SRO-TAF4 (RST) plant domain; This domain is found in plant RCD1, SRO and TAF4 proteins, ... |
185-251 | 1.05e-20 | ||||||
RCD1-SRO-TAF4 (RST) plant domain; This domain is found in plant RCD1, SRO and TAF4 proteins, hence its name of RST. It is required for interaction with multiple plant transcription factors. Radical-Induced Cell Death1 (RCD1) is an important regulator of stress and hormonal and developmental responses in Arabidopsis thaliana, as is its closest homolog, SRO1 - Similar To RCD-One1. TBP-Associated Factor 4 (TAF4) and TAF4-b are components of the transcription initiation factor complex TFIID. : Pssm-ID: 432383 Cd Length: 67 Bit Score: 86.39 E-value: 1.05e-20
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Name | Accession | Description | Interval | E-value | ||||||
TAF4 | pfam05236 | Transcription initiation factor TFIID component TAF4 family; This region of similarity is ... |
537-850 | 6.49e-82 | ||||||
Transcription initiation factor TFIID component TAF4 family; This region of similarity is found in Transcription initiation factor TFIID component TAF4. Pssm-ID: 461598 [Multi-domain] Cd Length: 264 Bit Score: 263.75 E-value: 6.49e-82
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HFD_TAF4 | cd08045 | histone-fold domain found in transcription initiation factor TFIID subunit 4 (TAF4) and ... |
578-676 | 2.55e-32 | ||||||
histone-fold domain found in transcription initiation factor TFIID subunit 4 (TAF4) and similar proteins; TAF4, also called TATA Binding Protein (TBP) associated factor 4, RNA polymerase II TBP-associated factor subunit C, TBP-associated factor 4, transcription initiation factor TFIID 130 kDa subunit (TAF(II)130, TAFII-130, TAFII130), or transcription initiation factor TFIID 135 kDa subunit (TAF(II)135, TAFII-135, TAFII135), is a component of the TFIID complex that is composed of TATA binding protein (TBP) and a number of TBP-associated factors (TAFs). TFIID is one of the general transcription factors required for accurate and regulated initiation by RNA polymerase II. It plays a central role in mediating promoter responses to various activators and repressors. TAF4 potentiates transcriptional activation by the AF-2S of retinoic acid, vitamin D3 and thyroid hormone. TAF4 also acts as a component of the TFTC-HAT complex and some MLL1/MLL complexes. TAF4 interacts with ATF7 and the interaction inhibits ATF7-mediated transactivation. Pssm-ID: 467027 [Multi-domain] Cd Length: 100 Bit Score: 120.80 E-value: 2.55e-32
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RST | pfam12174 | RCD1-SRO-TAF4 (RST) plant domain; This domain is found in plant RCD1, SRO and TAF4 proteins, ... |
185-251 | 1.05e-20 | ||||||
RCD1-SRO-TAF4 (RST) plant domain; This domain is found in plant RCD1, SRO and TAF4 proteins, hence its name of RST. It is required for interaction with multiple plant transcription factors. Radical-Induced Cell Death1 (RCD1) is an important regulator of stress and hormonal and developmental responses in Arabidopsis thaliana, as is its closest homolog, SRO1 - Similar To RCD-One1. TBP-Associated Factor 4 (TAF4) and TAF4-b are components of the transcription initiation factor complex TFIID. Pssm-ID: 432383 Cd Length: 67 Bit Score: 86.39 E-value: 1.05e-20
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Name | Accession | Description | Interval | E-value | ||||||
TAF4 | pfam05236 | Transcription initiation factor TFIID component TAF4 family; This region of similarity is ... |
537-850 | 6.49e-82 | ||||||
Transcription initiation factor TFIID component TAF4 family; This region of similarity is found in Transcription initiation factor TFIID component TAF4. Pssm-ID: 461598 [Multi-domain] Cd Length: 264 Bit Score: 263.75 E-value: 6.49e-82
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HFD_TAF4 | cd08045 | histone-fold domain found in transcription initiation factor TFIID subunit 4 (TAF4) and ... |
578-676 | 2.55e-32 | ||||||
histone-fold domain found in transcription initiation factor TFIID subunit 4 (TAF4) and similar proteins; TAF4, also called TATA Binding Protein (TBP) associated factor 4, RNA polymerase II TBP-associated factor subunit C, TBP-associated factor 4, transcription initiation factor TFIID 130 kDa subunit (TAF(II)130, TAFII-130, TAFII130), or transcription initiation factor TFIID 135 kDa subunit (TAF(II)135, TAFII-135, TAFII135), is a component of the TFIID complex that is composed of TATA binding protein (TBP) and a number of TBP-associated factors (TAFs). TFIID is one of the general transcription factors required for accurate and regulated initiation by RNA polymerase II. It plays a central role in mediating promoter responses to various activators and repressors. TAF4 potentiates transcriptional activation by the AF-2S of retinoic acid, vitamin D3 and thyroid hormone. TAF4 also acts as a component of the TFTC-HAT complex and some MLL1/MLL complexes. TAF4 interacts with ATF7 and the interaction inhibits ATF7-mediated transactivation. Pssm-ID: 467027 [Multi-domain] Cd Length: 100 Bit Score: 120.80 E-value: 2.55e-32
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RST | pfam12174 | RCD1-SRO-TAF4 (RST) plant domain; This domain is found in plant RCD1, SRO and TAF4 proteins, ... |
185-251 | 1.05e-20 | ||||||
RCD1-SRO-TAF4 (RST) plant domain; This domain is found in plant RCD1, SRO and TAF4 proteins, hence its name of RST. It is required for interaction with multiple plant transcription factors. Radical-Induced Cell Death1 (RCD1) is an important regulator of stress and hormonal and developmental responses in Arabidopsis thaliana, as is its closest homolog, SRO1 - Similar To RCD-One1. TBP-Associated Factor 4 (TAF4) and TAF4-b are components of the transcription initiation factor complex TFIID. Pssm-ID: 432383 Cd Length: 67 Bit Score: 86.39 E-value: 1.05e-20
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Blast search parameters | ||||
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