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Conserved domains on  [gi|334187494|ref|NP_001190251|]
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Actin-binding FH2 protein [Arabidopsis thaliana]

Protein Classification

FH2 domain-containing protein( domain architecture ID 10490182)

FH2 domain-containing protein similar to formin homology proteins that control rearrangements of the actin cytoskeleton, especially in the context of cytokinesis and cell polarization

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
FH2 pfam02181
Formin Homology 2 Domain;
179-519 8.60e-129

Formin Homology 2 Domain;


:

Pssm-ID: 396655  Cd Length: 372  Bit Score: 385.86  E-value: 8.60e-129
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187494  179 GSLWDELQiqygESQTAIELDVPEIETLFSVGAKPRPKPKPEKVP----------LIDLKRANNTIVNLKILKMPLPDMM 248
Cdd:pfam02181  26 GTVWDKLD----DESFELDGDLSELEELFSAKAKTKKNKKSEDKSsskkkpkevsLLDPKRAQNIAILLRKLKLPPEEII 101
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187494  249 AAVMAMDESVLDVDQIENLIQLCPTKEEMELLKNYTGDKATLGKSEQCLLELMKVPRFEAKLRVLSFKIPFGTKITKFRK 328
Cdd:pfam02181 102 QAILEGDEDALDLELLENLLKMAPTKEELKKLKEYKGDPSELGRAEQFLLELSKIPRLEARLRALLFKSTFEEEIEELKP 181
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187494  329 MLNVVNSACEEVRSSQMLKEIMKIILFLGNTLNQGTARGSAVGFRLDSLLILSETRADNNKMTLMHYLCKVLASKAADLL 408
Cdd:pfam02181 182 SLEALEAASEELRNSRKFKKLLELILALGNYMNDGTRRGQAKGFKLSSLLKLSDTKSTDNKTTLLHYLVKIIREKFPEVL 261
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187494  409 DFHKDLQSLESTLEINLKSLAEEIHAITKGLEKLKQELTASETDGPVSQVFRKLLKDFISSAETQVATVSTLYSSARINA 488
Cdd:pfam02181 262 DFSSELSHVKKAAKVNLEQLEKDVKQLERGLKKLERELELSALDEHPDDKFREVLKEFLKSAEEKLDKLESLLREALELF 341
                         330       340       350
                  ....*....|....*....|....*....|.
gi 334187494  489 DALAHYFGEDPNHYPFEKVSATLLSFIRLFK 519
Cdd:pfam02181 342 KELVEYFGEDPKETSPEEFFKILRDFLKEFK 372
 
Name Accession Description Interval E-value
FH2 pfam02181
Formin Homology 2 Domain;
179-519 8.60e-129

Formin Homology 2 Domain;


Pssm-ID: 396655  Cd Length: 372  Bit Score: 385.86  E-value: 8.60e-129
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187494  179 GSLWDELQiqygESQTAIELDVPEIETLFSVGAKPRPKPKPEKVP----------LIDLKRANNTIVNLKILKMPLPDMM 248
Cdd:pfam02181  26 GTVWDKLD----DESFELDGDLSELEELFSAKAKTKKNKKSEDKSsskkkpkevsLLDPKRAQNIAILLRKLKLPPEEII 101
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187494  249 AAVMAMDESVLDVDQIENLIQLCPTKEEMELLKNYTGDKATLGKSEQCLLELMKVPRFEAKLRVLSFKIPFGTKITKFRK 328
Cdd:pfam02181 102 QAILEGDEDALDLELLENLLKMAPTKEELKKLKEYKGDPSELGRAEQFLLELSKIPRLEARLRALLFKSTFEEEIEELKP 181
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187494  329 MLNVVNSACEEVRSSQMLKEIMKIILFLGNTLNQGTARGSAVGFRLDSLLILSETRADNNKMTLMHYLCKVLASKAADLL 408
Cdd:pfam02181 182 SLEALEAASEELRNSRKFKKLLELILALGNYMNDGTRRGQAKGFKLSSLLKLSDTKSTDNKTTLLHYLVKIIREKFPEVL 261
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187494  409 DFHKDLQSLESTLEINLKSLAEEIHAITKGLEKLKQELTASETDGPVSQVFRKLLKDFISSAETQVATVSTLYSSARINA 488
Cdd:pfam02181 262 DFSSELSHVKKAAKVNLEQLEKDVKQLERGLKKLERELELSALDEHPDDKFREVLKEFLKSAEEKLDKLESLLREALELF 341
                         330       340       350
                  ....*....|....*....|....*....|.
gi 334187494  489 DALAHYFGEDPNHYPFEKVSATLLSFIRLFK 519
Cdd:pfam02181 342 KELVEYFGEDPKETSPEEFFKILRDFLKEFK 372
FH2 smart00498
Formin Homology 2 Domain; FH proteins control rearrangements of the actin cytoskeleton, ...
179-539 3.91e-56

Formin Homology 2 Domain; FH proteins control rearrangements of the actin cytoskeleton, especially in the context of cytokinesis and cell polarisation. Members of this family have been found to interact with Rho-GTPases, profilin and other actin-assoziated proteins. These interactions are mediated by the proline-rich FH1 domain, usually located in front of FH2 (but not listed in SMART). Despite this cytosolic function, vertebrate formins have been assigned functions within the nucleus. A set of Formin-Binding Proteins (FBPs) has been shown to bind FH1 with their WW domain.


Pssm-ID: 214697 [Multi-domain]  Cd Length: 392  Bit Score: 196.42  E-value: 3.91e-56
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187494   179 GSLWDELQiqygESQtaiELDVPEIETLFSVGAKPRPKPKPEKVP-------------LIDLKRANNTIVNLKILKMPLP 245
Cdd:smart00498  25 GTVWDKID----EES---EGDLDELEELFSAKEKTKSASKDVSEKksilkkkasqefkILDPKRSQNLAILLRKLHMSYE 97
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187494   246 DMMAAVMAMDESVLDVDQIENLIQLCPTKEEMELLKNYTGDKAT-LGKSEQCLLELMKVPRFEAKLRVLSFKIPFGTKIT 324
Cdd:smart00498  98 EIKEAILEGDEDVLSVDLLEQLLKYAPTKEELKKLREYKEEDPEeLARAEQFLLLISNIPYLEERLNALLFKANFEEEVE 177
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187494   325 KFRKMLNVVNSACEEVRSSQMLKEIMKIILFLGNTLNQGTARGSAVGFRLDSLLILSETRADNNKMTLMHYLCKVLaska 404
Cdd:smart00498 178 DLKPQIEKVEAACEELRESKKFRKLLELILAIGNYMNGGSRRGQAYGFKLSSLLKLSDVKSADNKTTLLHFLVKII---- 253
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187494   405 adlldfhkdlqslestleinlkslaeeihaitkgLEKLKQELTASEtdgPVSQVFRKLLKDFISSAETQVATVSTLYSSA 484
Cdd:smart00498 254 ----------------------------------RKKYLGGLSDPE---NLDDKFIEVMKPFLKAAKEKYDKLQKDLSDL 296
                          330       340       350       360       370
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 334187494   485 RINADALAHYFGEDPNHYPFEKVSATLLSFIRLFKKAHQENVKQEDLEKKKAATE 539
Cdd:smart00498 297 KTRFEKLVEYYGEDPKDTSPEEFFKDFNEFLKEFSKAAEENIKKEEEEEERRKKL 351
 
Name Accession Description Interval E-value
FH2 pfam02181
Formin Homology 2 Domain;
179-519 8.60e-129

Formin Homology 2 Domain;


Pssm-ID: 396655  Cd Length: 372  Bit Score: 385.86  E-value: 8.60e-129
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187494  179 GSLWDELQiqygESQTAIELDVPEIETLFSVGAKPRPKPKPEKVP----------LIDLKRANNTIVNLKILKMPLPDMM 248
Cdd:pfam02181  26 GTVWDKLD----DESFELDGDLSELEELFSAKAKTKKNKKSEDKSsskkkpkevsLLDPKRAQNIAILLRKLKLPPEEII 101
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187494  249 AAVMAMDESVLDVDQIENLIQLCPTKEEMELLKNYTGDKATLGKSEQCLLELMKVPRFEAKLRVLSFKIPFGTKITKFRK 328
Cdd:pfam02181 102 QAILEGDEDALDLELLENLLKMAPTKEELKKLKEYKGDPSELGRAEQFLLELSKIPRLEARLRALLFKSTFEEEIEELKP 181
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187494  329 MLNVVNSACEEVRSSQMLKEIMKIILFLGNTLNQGTARGSAVGFRLDSLLILSETRADNNKMTLMHYLCKVLASKAADLL 408
Cdd:pfam02181 182 SLEALEAASEELRNSRKFKKLLELILALGNYMNDGTRRGQAKGFKLSSLLKLSDTKSTDNKTTLLHYLVKIIREKFPEVL 261
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187494  409 DFHKDLQSLESTLEINLKSLAEEIHAITKGLEKLKQELTASETDGPVSQVFRKLLKDFISSAETQVATVSTLYSSARINA 488
Cdd:pfam02181 262 DFSSELSHVKKAAKVNLEQLEKDVKQLERGLKKLERELELSALDEHPDDKFREVLKEFLKSAEEKLDKLESLLREALELF 341
                         330       340       350
                  ....*....|....*....|....*....|.
gi 334187494  489 DALAHYFGEDPNHYPFEKVSATLLSFIRLFK 519
Cdd:pfam02181 342 KELVEYFGEDPKETSPEEFFKILRDFLKEFK 372
FH2 smart00498
Formin Homology 2 Domain; FH proteins control rearrangements of the actin cytoskeleton, ...
179-539 3.91e-56

Formin Homology 2 Domain; FH proteins control rearrangements of the actin cytoskeleton, especially in the context of cytokinesis and cell polarisation. Members of this family have been found to interact with Rho-GTPases, profilin and other actin-assoziated proteins. These interactions are mediated by the proline-rich FH1 domain, usually located in front of FH2 (but not listed in SMART). Despite this cytosolic function, vertebrate formins have been assigned functions within the nucleus. A set of Formin-Binding Proteins (FBPs) has been shown to bind FH1 with their WW domain.


Pssm-ID: 214697 [Multi-domain]  Cd Length: 392  Bit Score: 196.42  E-value: 3.91e-56
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187494   179 GSLWDELQiqygESQtaiELDVPEIETLFSVGAKPRPKPKPEKVP-------------LIDLKRANNTIVNLKILKMPLP 245
Cdd:smart00498  25 GTVWDKID----EES---EGDLDELEELFSAKEKTKSASKDVSEKksilkkkasqefkILDPKRSQNLAILLRKLHMSYE 97
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187494   246 DMMAAVMAMDESVLDVDQIENLIQLCPTKEEMELLKNYTGDKAT-LGKSEQCLLELMKVPRFEAKLRVLSFKIPFGTKIT 324
Cdd:smart00498  98 EIKEAILEGDEDVLSVDLLEQLLKYAPTKEELKKLREYKEEDPEeLARAEQFLLLISNIPYLEERLNALLFKANFEEEVE 177
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187494   325 KFRKMLNVVNSACEEVRSSQMLKEIMKIILFLGNTLNQGTARGSAVGFRLDSLLILSETRADNNKMTLMHYLCKVLaska 404
Cdd:smart00498 178 DLKPQIEKVEAACEELRESKKFRKLLELILAIGNYMNGGSRRGQAYGFKLSSLLKLSDVKSADNKTTLLHFLVKII---- 253
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187494   405 adlldfhkdlqslestleinlkslaeeihaitkgLEKLKQELTASEtdgPVSQVFRKLLKDFISSAETQVATVSTLYSSA 484
Cdd:smart00498 254 ----------------------------------RKKYLGGLSDPE---NLDDKFIEVMKPFLKAAKEKYDKLQKDLSDL 296
                          330       340       350       360       370
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 334187494   485 RINADALAHYFGEDPNHYPFEKVSATLLSFIRLFKKAHQENVKQEDLEKKKAATE 539
Cdd:smart00498 297 KTRFEKLVEYYGEDPKDTSPEEFFKDFNEFLKEFSKAAEENIKKEEEEEERRKKL 351
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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