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Conserved domains on  [gi|334185789|ref|NP_001190024|]
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Glycosyl hydrolase family protein [Arabidopsis thaliana]

Protein Classification

glycoside hydrolase family 3 protein( domain architecture ID 11444863)

glycoside hydrolase family 3 (GH3) protein catalyzes the hydrolytic removal of nonreducing glycosyl end residues from a broad range of beta-D-glycans and beta-D-glycosides; similar to Wickerhamomyces anomalus beta-glucosidase, which catalyzes the hydrolysis of terminal beta-D-glucosyl residues

CAZY:  GH3
EC:  3.2.1.-
Gene Ontology:  GO:0005975|GO:0004553
SCOP:  4003202

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
BglX COG1472
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism];
28-463 1.49e-120

Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism];


:

Pssm-ID: 441081 [Multi-domain]  Cd Length: 463  Bit Score: 366.33  E-value: 1.49e-120
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334185789  28 MTLPEKIGQMTQIERVVTTPPVITDNFIGSVLNGGgswpfedakTSDWADMIDGYQNAalaSRLGIPIIYGIDAVHGNNN 107
Cdd:COG1472    1 MTLEEKIGQLFQVGVTGEGAELIREGHVGGVILFD---------PAQWAELTNELQRA---TRLGIPLLIGTDAEHGVAN 68
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334185789 108 --VYGATIFPHNIGLGATslvmllhidlepkslgrnkvvvkcdRDADLIRRVGAATALEVRACGAHWAFAPCVAtsIQ-- 183
Cdd:COG1472   69 rpAGGATVFPQAIALAAT-------------------------WDPELAERVGRAIAREARALGINWNLAPVVD--INrd 121
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334185789 184 ---GRIpnkkikkiyMRkelkC--EDPDIICEL-SSLVSGLQGeppkehpngypflagrNNVVACAKHFVGDGGTDKGIN 257
Cdd:COG1472  122 prwGRN---------FE----SfgEDPYLVGRMaAAYVRGLQG----------------NGVAATAKHFAGHGDEETGRH 172
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334185789 258 EGNTIVSYEELEKIHLAPYLNCLAQGVSTVMASYSSWNGSKLHSDYFLLTELLKQKLGFKGFVISDWEALERLSEpFGSN 337
Cdd:COG1472  173 TGPVDVSERELREIYLPPFEAAIKAGVASVMTAYNALNGVPATLSKWLLTDLLRGEWGFDGLVVSDWGAMGGLAE-HYDP 251
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334185789 338 YRNCVKiSVNAGVDMVMVPfkYEQFIKDLTDLVESGEVTMSRIDDAVERILRVKFVAGLFEHPLTDR-SLLGTVGCKEHR 416
Cdd:COG1472  252 AEAAVL-ALNAGLDLEMPG--GKAFIAALLEAVESGELSEERIDEAVRRILRLKFRLGLFDDPYVDPeRAAEVVGSPEHR 328
                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....*..
gi 334185789 417 ELARESVRKSLVLLKNgtnsEKPFLPLDRNVKRILVTGTHADDLGYQ 463
Cdd:COG1472  329 ALAREAARESIVLLKN----DNGLLPLAALAAGGALAADAAAAAAAA 371
Glyco_hydro_3_C pfam01915
Glycosyl hydrolase family 3 C-terminal domain; This domain is involved in catalysis and may be ...
427-638 2.20e-55

Glycosyl hydrolase family 3 C-terminal domain; This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.


:

Pssm-ID: 396478 [Multi-domain]  Cd Length: 216  Bit Score: 187.52  E-value: 2.20e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334185789  427 LVLLKNgtnsEKPFLPLDRNVKRILVTGTHADDLGYQCGGWTkawfglSGRITIGTTLLDAIKEAVGD------------ 494
Cdd:pfam01915   1 IVLLKN----ENGLLPLPKKAKKIAVIGPNADDPPNGGGGSG------TGNPPYLVTPLDGIRARAGDlyadgahltvil 70
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334185789  495 KTEVIYEKTPSEETLASLQRFSYAIVAVGETPYAETLG-DNSELTIPLNGNDIVTALAEK-IPTLVVLFSGRPLVLEPLV 572
Cdd:pfam01915  71 SNGTADDDAGIAEAVAAAKDADVAIVFVGLDPETEGEGyDRTDLALPGNQDALIKAVAAAgKPTVVVLHSGGPVEMEPWA 150
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 334185789  573 LEKAEALVAAWLPGTE-GQGMTDVIFGDYDFEGKLPVSWFKRVDQLPLTADAnSYDPLFPLGFGLNY 638
Cdd:pfam01915 151 EENVDAILAAWYPGQEgGNAIADVLFGDVNPSGKLPVTFPKSLEDLPAEGGP-LLPDLYPEGYGLSY 216
 
Name Accession Description Interval E-value
BglX COG1472
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism];
28-463 1.49e-120

Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism];


Pssm-ID: 441081 [Multi-domain]  Cd Length: 463  Bit Score: 366.33  E-value: 1.49e-120
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334185789  28 MTLPEKIGQMTQIERVVTTPPVITDNFIGSVLNGGgswpfedakTSDWADMIDGYQNAalaSRLGIPIIYGIDAVHGNNN 107
Cdd:COG1472    1 MTLEEKIGQLFQVGVTGEGAELIREGHVGGVILFD---------PAQWAELTNELQRA---TRLGIPLLIGTDAEHGVAN 68
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334185789 108 --VYGATIFPHNIGLGATslvmllhidlepkslgrnkvvvkcdRDADLIRRVGAATALEVRACGAHWAFAPCVAtsIQ-- 183
Cdd:COG1472   69 rpAGGATVFPQAIALAAT-------------------------WDPELAERVGRAIAREARALGINWNLAPVVD--INrd 121
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334185789 184 ---GRIpnkkikkiyMRkelkC--EDPDIICEL-SSLVSGLQGeppkehpngypflagrNNVVACAKHFVGDGGTDKGIN 257
Cdd:COG1472  122 prwGRN---------FE----SfgEDPYLVGRMaAAYVRGLQG----------------NGVAATAKHFAGHGDEETGRH 172
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334185789 258 EGNTIVSYEELEKIHLAPYLNCLAQGVSTVMASYSSWNGSKLHSDYFLLTELLKQKLGFKGFVISDWEALERLSEpFGSN 337
Cdd:COG1472  173 TGPVDVSERELREIYLPPFEAAIKAGVASVMTAYNALNGVPATLSKWLLTDLLRGEWGFDGLVVSDWGAMGGLAE-HYDP 251
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334185789 338 YRNCVKiSVNAGVDMVMVPfkYEQFIKDLTDLVESGEVTMSRIDDAVERILRVKFVAGLFEHPLTDR-SLLGTVGCKEHR 416
Cdd:COG1472  252 AEAAVL-ALNAGLDLEMPG--GKAFIAALLEAVESGELSEERIDEAVRRILRLKFRLGLFDDPYVDPeRAAEVVGSPEHR 328
                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....*..
gi 334185789 417 ELARESVRKSLVLLKNgtnsEKPFLPLDRNVKRILVTGTHADDLGYQ 463
Cdd:COG1472  329 ALAREAARESIVLLKN----DNGLLPLAALAAGGALAADAAAAAAAA 371
PRK15098 PRK15098
beta-glucosidase BglX;
18-640 1.15e-80

beta-glucosidase BglX;


Pssm-ID: 185053 [Multi-domain]  Cd Length: 765  Bit Score: 270.79  E-value: 1.15e-80
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334185789  18 EARVKDLLSRMTLPEKIGQMtqieRVVTTPP---------VITDNFIGSVLNgggswpfedakTSDWADmIDGYQNAALA 88
Cdd:PRK15098  35 DAFVTDLLKKMTLDEKIGQL----RLISVGPdnpkeaireMIKAGQVGAIFN-----------TVTRQD-IRAMQDQVMQ 98
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334185789  89 -SRLGIPIIYGIDAVHGNNnvygaTIFPhnIGLG-ATSLvmllhidlepkslgrnkvvvkcdrDADLIRRVGAATALEVR 166
Cdd:PRK15098  99 lSRLKIPLFFAYDVVHGQR-----TVFP--ISLGlASSW------------------------DLDAVATVGRVSAYEAA 147
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334185789 167 ACGAHWAFAPCVATSIQ---GRIpnkkikkiymrKELKCEDPDIICELS-SLVSGLQGEPPkehpngypflAGRNNVVAC 242
Cdd:PRK15098 148 DDGLNMTWAPMVDISRDprwGRA-----------SEGFGEDTYLTSIMGkTMVKAMQGKSP----------ADRYSVMTS 206
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334185789 243 AKHFVGDGGTDKGiNEGNTI-VSYEELEKIHLAPYLNCLAQGVSTVMASYSSWNGSKLHSDYFLLTELLKQKLGFKGFVI 321
Cdd:PRK15098 207 VKHFALYGAVEGG-RDYNTVdMSPQRMFNDYLPPYKAGLDAGSGGVMVALNSLNGTPATSDSWLLKDLLRDQWGFKGITV 285
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334185789 322 SDWEAL-ERLSEPFGSNYRNCVKISVNAGVDMVMVPfkyEQFIKDLTDLVESGEVTMSRIDDAVERILRVKFVAGLFEHP 400
Cdd:PRK15098 286 SDHGAIkELIKHGVAADPEDAVRLALKSGIDMSMSD---EYYSKYLPGLVKSGKVTMAELDDAVRHVLNVKYDMGLFNDP 362
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334185789 401 LtdrSLLGTVG---------CKEHRELARESVRKSLVLLKNGTNSekpfLPLDRNvKRILVTGTHADDLGYQCGGWTKAw 471
Cdd:PRK15098 363 Y---SHLGPKEsdpvdtnaeSRLHRKEAREVARESLVLLKNRLET----LPLKKS-GTIAVVGPLADSQRDVMGSWSAA- 433
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334185789 472 fglsGRITIGTTLLDAIKEAVGDKTEVIYEK--------------------------TPSE---ETLASLQRFSYAIVAV 522
Cdd:PRK15098 434 ----GVADQSVTVLQGIKNAVGDKAKVLYAKganvtddkgiidflnqyeeavkvdprSPQAmidEAVQAAKQADVVVAVV 509
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334185789 523 GETP-YAETLGDNSELTIPLNGNDIVTAL-AEKIPTLVVLFSGRPLVLeplVLEK--AEALVAAWLPGTEG-QGMTDVIF 597
Cdd:PRK15098 510 GEAQgMAHEASSRTDITIPQSQRDLIAALkATGKPLVLVLMNGRPLAL---VKEDqqADAILETWFAGTEGgNAIADVLF 586
                        650       660       670       680       690       700
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 334185789 598 GDYDFEGKLPVSWFKRVDQLPL-----------TADA-NSYD---------PLFPLGFGLNYNS 640
Cdd:PRK15098 587 GDYNPSGKLPMSFPRSVGQIPVyynhlntgrpyNPDKpNKYTsryfdeangPLYPFGYGLSYTT 650
Glyco_hydro_3 pfam00933
Glycosyl hydrolase family 3 N terminal domain;
29-390 1.99e-64

Glycosyl hydrolase family 3 N terminal domain;


Pssm-ID: 395747 [Multi-domain]  Cd Length: 316  Bit Score: 214.97  E-value: 1.99e-64
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334185789   29 TLPEKIGQMTQIERVVT-----TPPVITDNFIGSVLNGGGSwpFEDAKTSdwADMIDGYQNAALASRLGIPIIYGIDAVH 103
Cdd:pfam00933   1 TLDEKIGQLLQVEVGEGkpsheEAELLKDYHVGGIILFGGN--LEDWVQL--SDLIRYQRQAVEESRLGIPLLVAVDQEG 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334185789  104 GNNNVYGA-TIFPHNIGLGATSlvmllhidlepkslgrnkvvvkcdrDADLIRRVGAATALEVRACGAHWAFAPCVATsi 182
Cdd:pfam00933  77 GRVQRFGEgTMFPSAIALAATS-------------------------DPDLAKQMGWAMAREMRALGIDWDFAPVVDV-- 129
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334185789  183 qGRIPNKKIKKiymrkELKCEDPDIICEL-SSLVSGLQGEPpkehpngypflagrnnVVACAKHFVG--DGGTDKGINEG 259
Cdd:pfam00933 130 -ARDPRWGIGE-----RSFSEDPQLVSALaGAMIEGLQGAG----------------VLATVKHFPGhgHGATDSHKETP 187
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334185789  260 NTIVSYEELEKIHLAPYLNCLAQGVSTVMAS---YSSWNGSKLHSDYFLLTELLKQKLGFKGFVISDWEALERLSEPFGs 336
Cdd:pfam00933 188 TTPRPEQRLRTVDLLPFQAAIEAGVDAVMAAhviYSSLDGTPATGSKYLLTDVLRKKWGFDGIVVSDDLSMKGIADHGG- 266
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....
gi 334185789  337 nYRNCVKISVNAGVDMVMVPfkyEQFIKDLTDLVESGEVTMSRIDDAVERILRV 390
Cdd:pfam00933 267 -PAEAVRRALEAGVDIALVP---EERTKYLKKVVKNGKLPMARIDAAVRRVLRL 316
Glyco_hydro_3_C pfam01915
Glycosyl hydrolase family 3 C-terminal domain; This domain is involved in catalysis and may be ...
427-638 2.20e-55

Glycosyl hydrolase family 3 C-terminal domain; This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.


Pssm-ID: 396478 [Multi-domain]  Cd Length: 216  Bit Score: 187.52  E-value: 2.20e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334185789  427 LVLLKNgtnsEKPFLPLDRNVKRILVTGTHADDLGYQCGGWTkawfglSGRITIGTTLLDAIKEAVGD------------ 494
Cdd:pfam01915   1 IVLLKN----ENGLLPLPKKAKKIAVIGPNADDPPNGGGGSG------TGNPPYLVTPLDGIRARAGDlyadgahltvil 70
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334185789  495 KTEVIYEKTPSEETLASLQRFSYAIVAVGETPYAETLG-DNSELTIPLNGNDIVTALAEK-IPTLVVLFSGRPLVLEPLV 572
Cdd:pfam01915  71 SNGTADDDAGIAEAVAAAKDADVAIVFVGLDPETEGEGyDRTDLALPGNQDALIKAVAAAgKPTVVVLHSGGPVEMEPWA 150
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 334185789  573 LEKAEALVAAWLPGTE-GQGMTDVIFGDYDFEGKLPVSWFKRVDQLPLTADAnSYDPLFPLGFGLNY 638
Cdd:pfam01915 151 EENVDAILAAWYPGQEgGNAIADVLFGDVNPSGKLPVTFPKSLEDLPAEGGP-LLPDLYPEGYGLSY 216
 
Name Accession Description Interval E-value
BglX COG1472
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism];
28-463 1.49e-120

Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism];


Pssm-ID: 441081 [Multi-domain]  Cd Length: 463  Bit Score: 366.33  E-value: 1.49e-120
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334185789  28 MTLPEKIGQMTQIERVVTTPPVITDNFIGSVLNGGgswpfedakTSDWADMIDGYQNAalaSRLGIPIIYGIDAVHGNNN 107
Cdd:COG1472    1 MTLEEKIGQLFQVGVTGEGAELIREGHVGGVILFD---------PAQWAELTNELQRA---TRLGIPLLIGTDAEHGVAN 68
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334185789 108 --VYGATIFPHNIGLGATslvmllhidlepkslgrnkvvvkcdRDADLIRRVGAATALEVRACGAHWAFAPCVAtsIQ-- 183
Cdd:COG1472   69 rpAGGATVFPQAIALAAT-------------------------WDPELAERVGRAIAREARALGINWNLAPVVD--INrd 121
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334185789 184 ---GRIpnkkikkiyMRkelkC--EDPDIICEL-SSLVSGLQGeppkehpngypflagrNNVVACAKHFVGDGGTDKGIN 257
Cdd:COG1472  122 prwGRN---------FE----SfgEDPYLVGRMaAAYVRGLQG----------------NGVAATAKHFAGHGDEETGRH 172
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334185789 258 EGNTIVSYEELEKIHLAPYLNCLAQGVSTVMASYSSWNGSKLHSDYFLLTELLKQKLGFKGFVISDWEALERLSEpFGSN 337
Cdd:COG1472  173 TGPVDVSERELREIYLPPFEAAIKAGVASVMTAYNALNGVPATLSKWLLTDLLRGEWGFDGLVVSDWGAMGGLAE-HYDP 251
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334185789 338 YRNCVKiSVNAGVDMVMVPfkYEQFIKDLTDLVESGEVTMSRIDDAVERILRVKFVAGLFEHPLTDR-SLLGTVGCKEHR 416
Cdd:COG1472  252 AEAAVL-ALNAGLDLEMPG--GKAFIAALLEAVESGELSEERIDEAVRRILRLKFRLGLFDDPYVDPeRAAEVVGSPEHR 328
                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....*..
gi 334185789 417 ELARESVRKSLVLLKNgtnsEKPFLPLDRNVKRILVTGTHADDLGYQ 463
Cdd:COG1472  329 ALAREAARESIVLLKN----DNGLLPLAALAAGGALAADAAAAAAAA 371
PRK15098 PRK15098
beta-glucosidase BglX;
18-640 1.15e-80

beta-glucosidase BglX;


Pssm-ID: 185053 [Multi-domain]  Cd Length: 765  Bit Score: 270.79  E-value: 1.15e-80
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334185789  18 EARVKDLLSRMTLPEKIGQMtqieRVVTTPP---------VITDNFIGSVLNgggswpfedakTSDWADmIDGYQNAALA 88
Cdd:PRK15098  35 DAFVTDLLKKMTLDEKIGQL----RLISVGPdnpkeaireMIKAGQVGAIFN-----------TVTRQD-IRAMQDQVMQ 98
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334185789  89 -SRLGIPIIYGIDAVHGNNnvygaTIFPhnIGLG-ATSLvmllhidlepkslgrnkvvvkcdrDADLIRRVGAATALEVR 166
Cdd:PRK15098  99 lSRLKIPLFFAYDVVHGQR-----TVFP--ISLGlASSW------------------------DLDAVATVGRVSAYEAA 147
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334185789 167 ACGAHWAFAPCVATSIQ---GRIpnkkikkiymrKELKCEDPDIICELS-SLVSGLQGEPPkehpngypflAGRNNVVAC 242
Cdd:PRK15098 148 DDGLNMTWAPMVDISRDprwGRA-----------SEGFGEDTYLTSIMGkTMVKAMQGKSP----------ADRYSVMTS 206
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334185789 243 AKHFVGDGGTDKGiNEGNTI-VSYEELEKIHLAPYLNCLAQGVSTVMASYSSWNGSKLHSDYFLLTELLKQKLGFKGFVI 321
Cdd:PRK15098 207 VKHFALYGAVEGG-RDYNTVdMSPQRMFNDYLPPYKAGLDAGSGGVMVALNSLNGTPATSDSWLLKDLLRDQWGFKGITV 285
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334185789 322 SDWEAL-ERLSEPFGSNYRNCVKISVNAGVDMVMVPfkyEQFIKDLTDLVESGEVTMSRIDDAVERILRVKFVAGLFEHP 400
Cdd:PRK15098 286 SDHGAIkELIKHGVAADPEDAVRLALKSGIDMSMSD---EYYSKYLPGLVKSGKVTMAELDDAVRHVLNVKYDMGLFNDP 362
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334185789 401 LtdrSLLGTVG---------CKEHRELARESVRKSLVLLKNGTNSekpfLPLDRNvKRILVTGTHADDLGYQCGGWTKAw 471
Cdd:PRK15098 363 Y---SHLGPKEsdpvdtnaeSRLHRKEAREVARESLVLLKNRLET----LPLKKS-GTIAVVGPLADSQRDVMGSWSAA- 433
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334185789 472 fglsGRITIGTTLLDAIKEAVGDKTEVIYEK--------------------------TPSE---ETLASLQRFSYAIVAV 522
Cdd:PRK15098 434 ----GVADQSVTVLQGIKNAVGDKAKVLYAKganvtddkgiidflnqyeeavkvdprSPQAmidEAVQAAKQADVVVAVV 509
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334185789 523 GETP-YAETLGDNSELTIPLNGNDIVTAL-AEKIPTLVVLFSGRPLVLeplVLEK--AEALVAAWLPGTEG-QGMTDVIF 597
Cdd:PRK15098 510 GEAQgMAHEASSRTDITIPQSQRDLIAALkATGKPLVLVLMNGRPLAL---VKEDqqADAILETWFAGTEGgNAIADVLF 586
                        650       660       670       680       690       700
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 334185789 598 GDYDFEGKLPVSWFKRVDQLPL-----------TADA-NSYD---------PLFPLGFGLNYNS 640
Cdd:PRK15098 587 GDYNPSGKLPMSFPRSVGQIPVyynhlntgrpyNPDKpNKYTsryfdeangPLYPFGYGLSYTT 650
Glyco_hydro_3 pfam00933
Glycosyl hydrolase family 3 N terminal domain;
29-390 1.99e-64

Glycosyl hydrolase family 3 N terminal domain;


Pssm-ID: 395747 [Multi-domain]  Cd Length: 316  Bit Score: 214.97  E-value: 1.99e-64
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334185789   29 TLPEKIGQMTQIERVVT-----TPPVITDNFIGSVLNGGGSwpFEDAKTSdwADMIDGYQNAALASRLGIPIIYGIDAVH 103
Cdd:pfam00933   1 TLDEKIGQLLQVEVGEGkpsheEAELLKDYHVGGIILFGGN--LEDWVQL--SDLIRYQRQAVEESRLGIPLLVAVDQEG 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334185789  104 GNNNVYGA-TIFPHNIGLGATSlvmllhidlepkslgrnkvvvkcdrDADLIRRVGAATALEVRACGAHWAFAPCVATsi 182
Cdd:pfam00933  77 GRVQRFGEgTMFPSAIALAATS-------------------------DPDLAKQMGWAMAREMRALGIDWDFAPVVDV-- 129
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334185789  183 qGRIPNKKIKKiymrkELKCEDPDIICEL-SSLVSGLQGEPpkehpngypflagrnnVVACAKHFVG--DGGTDKGINEG 259
Cdd:pfam00933 130 -ARDPRWGIGE-----RSFSEDPQLVSALaGAMIEGLQGAG----------------VLATVKHFPGhgHGATDSHKETP 187
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334185789  260 NTIVSYEELEKIHLAPYLNCLAQGVSTVMAS---YSSWNGSKLHSDYFLLTELLKQKLGFKGFVISDWEALERLSEPFGs 336
Cdd:pfam00933 188 TTPRPEQRLRTVDLLPFQAAIEAGVDAVMAAhviYSSLDGTPATGSKYLLTDVLRKKWGFDGIVVSDDLSMKGIADHGG- 266
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....
gi 334185789  337 nYRNCVKISVNAGVDMVMVPfkyEQFIKDLTDLVESGEVTMSRIDDAVERILRV 390
Cdd:pfam00933 267 -PAEAVRRALEAGVDIALVP---EERTKYLKKVVKNGKLPMARIDAAVRRVLRL 316
Glyco_hydro_3_C pfam01915
Glycosyl hydrolase family 3 C-terminal domain; This domain is involved in catalysis and may be ...
427-638 2.20e-55

Glycosyl hydrolase family 3 C-terminal domain; This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.


Pssm-ID: 396478 [Multi-domain]  Cd Length: 216  Bit Score: 187.52  E-value: 2.20e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334185789  427 LVLLKNgtnsEKPFLPLDRNVKRILVTGTHADDLGYQCGGWTkawfglSGRITIGTTLLDAIKEAVGD------------ 494
Cdd:pfam01915   1 IVLLKN----ENGLLPLPKKAKKIAVIGPNADDPPNGGGGSG------TGNPPYLVTPLDGIRARAGDlyadgahltvil 70
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334185789  495 KTEVIYEKTPSEETLASLQRFSYAIVAVGETPYAETLG-DNSELTIPLNGNDIVTALAEK-IPTLVVLFSGRPLVLEPLV 572
Cdd:pfam01915  71 SNGTADDDAGIAEAVAAAKDADVAIVFVGLDPETEGEGyDRTDLALPGNQDALIKAVAAAgKPTVVVLHSGGPVEMEPWA 150
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 334185789  573 LEKAEALVAAWLPGTE-GQGMTDVIFGDYDFEGKLPVSWFKRVDQLPLTADAnSYDPLFPLGFGLNY 638
Cdd:pfam01915 151 EENVDAILAAWYPGQEgGNAIADVLFGDVNPSGKLPVTFPKSLEDLPAEGGP-LLPDLYPEGYGLSY 216
PLN03080 PLN03080
Probable beta-xylosidase; Provisional
12-638 1.75e-34

Probable beta-xylosidase; Provisional


Pssm-ID: 178629 [Multi-domain]  Cd Length: 779  Bit Score: 139.99  E-value: 1.75e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334185789  12 NKDAPVEARVKDLLSRMTLPEKIGQMTQiervvttppvitdnfigsvlngggswpfedaktsdwadmidgyqNAALASRL 91
Cdd:PLN03080  44 NASLPIPARARSLVSLLTLDEKIAQLSN--------------------------------------------TAAGVPRL 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334185789  92 GIPII-YGIDAVHG-----------NNNVYGATIFPHNIglgatslvmllhidLEPKSLGRNkvvvkcdrdadLIRRVGA 159
Cdd:PLN03080  80 GIPPYeWWSESLHGladngpgvsfnSGPVSAATSFPQVI--------------LSAASFNRS-----------LWRAIGS 134
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334185789 160 ATALEVRA------CG-AHWAfapcvatsiqgriPNKKIKK--IYMR-KELKCEDPDIICELS-SLVSGLQGEPPKehpN 228
Cdd:PLN03080 135 AIAVEARAmynagqAGlTFWA-------------PNINIFRdpRWGRgQETPGEDPAVASAYSvEFVKGFQGGKWK---K 198
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334185789 229 GYPFLA-GRNNVVACAKHFVG-D----GGTDKgiNEGNTIVSYEELEKIHLAPYLNCLAQG-VSTVMASYSSWNGSKLHS 301
Cdd:PLN03080 199 VRDDGEdGKLMLSACCKHYTAyDlekwGNFSR--YTFNAVVTEQDMEDTYQPPFKSCIQEGkASCLMCSYNQVNGVPACA 276
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334185789 302 DYFLLTELlKQKLGFKGFVISDWEALERLSE--PFGSNYRNCVKISVNAGVDMVMVPFkyeqFIKDLTDLVESGEVTMSR 379
Cdd:PLN03080 277 RKDLLQKA-RDEWGFQGYITSDCDAVATIFEyqTYTKSPEDAVADVLKAGMDINCGSY----MLRHTQSAIEKGKVQEED 351
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334185789 380 IDDAVERILRVKFVAGLFEHPlTDRSLLGTVG----C-KEHRELARESVRKSLVLLKNgtnsEKPFLPLDRN-VKRILVT 453
Cdd:PLN03080 352 IDRALFNLFSVQLRLGLFDGD-PRNGWYGKLGpnnvCtKEHRELALEAARQGIVLLKN----DKKFLPLNKSeVSSLAII 426
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334185789 454 GTHADDLGYQCGGWTkawfglsGRITIGTTLLDAIKE-------AVGDKTEVIYEKTPSEETLASLQRFSYAIVAVGETP 526
Cdd:PLN03080 427 GPMANDPYNLGGDYT-------GVPCQPTTLFKGLQAyvkktsfAAGCKDVSCNSDTGFGEAIAIAKRADFVVVVAGLDL 499
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334185789 527 YAETLG-DNSELTIPLNGNDIVTALAE--KIPTLVVLFSGRPLvlePLVLEKAEALVAA--WL--PG-TEGQGMTDVIFG 598
Cdd:PLN03080 500 SQETEDhDRVSLLLPGKQMDLISSVASvsKKPVVLVLTGGGPV---DVSFAKQDPRIASilWIgyPGeVGGQALAEIIFG 576
                        650       660       670       680       690
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 334185789 599 DYDFEGKLPVSW----FKRVDQLPLTADANSY-------------DPLFPLGFGLNY 638
Cdd:PLN03080 577 DYNPGGRLPMTWypesFTAVPMTDMNMRADPSrgypgrtyrfytgDVVYGFGYGLSY 633
PRK05337 PRK05337
beta-hexosaminidase; Provisional
203-355 1.56e-05

beta-hexosaminidase; Provisional


Pssm-ID: 235417 [Multi-domain]  Cd Length: 337  Bit Score: 47.46  E-value: 1.56e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334185789 203 EDPDIICEL-SSLVSGLQgeppkehpngypfLAGrnnVVACAKHFVGDGGTdkginEGNTIV-------SYEELEKIHLA 274
Cdd:PRK05337 139 RDPQVVAALaSAFIDGMH-------------AAG---MAATGKHFPGHGAV-----EADSHVetpvderPLEEIRAEDMA 197
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334185789 275 PYLNCLAQGVSTVM-------------ASYSS-WngsklhsdyflLTELLKQKLGFKGFVISDwealeRLS---EPFGSN 337
Cdd:PRK05337 198 PFRALIAAGLDAVMpahviypqvdprpAGFSRyW-----------LQDILRQELGFDGVIFSD-----DLSmegAAVAGD 261
                        170
                 ....*....|....*...
gi 334185789 338 YRNCVKISVNAGVDMVMV 355
Cdd:PRK05337 262 YAERAQAALDAGCDMVLV 279
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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