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Conserved domains on  [gi|334184044|ref|NP_001185447|]
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P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana]

Protein Classification

nucleoside/nucleotide kinase family protein; thymidylate kinase( domain architecture ID 10010978)

nucleoside/nucleotide kinase family protein may catalyze the reversible phosphate group transfer from nucleoside triphosphates to nucleosides/nucleotides, nucleoside monophosphates, or sugars| thymidylate kinase with a major facilitator superfamily (MFS) transporter domain may function in the phosphorylation of thymidine monophosphate and the transport across cytoplasmic or internal membranes of various substrates including sugar phosphates

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PLN03046 PLN03046
D-glycerate 3-kinase; Provisional
 1-450 0e+00

D-glycerate 3-kinase; Provisional


:

Pssm-ID: 178608  Cd Length: 460  Bit Score: 916.61  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334184044   1 MAVAISGSSLISSTLQHYNNRIYIRDYPIPCHSS-----NPICNSFNFKRRSFSPSSPKFNDHVVNPSSSYLSSKLSPIR 75
Cdd:PLN03046   1 MAVASSLSSLISSNLQHYMNPIHAADYPIPCASAaafnfNPISNPFNLKRRPYSPSSHKFNDRVAASCSSYPSSKLSSRK 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334184044  76 THSSFAACGCSWIQDNSMVHDYATTtNGTSKRCSALPTTNTVDVSSVSDLFEFICSGPLVNKIGITPQRVGQSIDKWLLY 155
Cdd:PLN03046  81 THLSCPGCGCSWIQDNSMVHDYATT-AATSKRCSSLPTSSPALVSSVQDLYEFICSGPLVDKIGYTPEKIAQSIDKWLLY 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334184044 156 GSQLCRLFQLNELKLTIPQKARLYHYYIPVFIWCEDQIALHNSKFKDGDDVPPLVIGFSAPQGCGKTTLVFALDYLFKTT 235
Cdd:PLN03046 160 GSQLCRLFQLNELKLTEPQKARIYHYYIPVFIWCEDQIAEHRSKFKDGDDIPPLVIGFSAPQGCGKTTLVFALDYLFRVT 239

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334184044 236 KKKSATISVDDFYLTAEGQAELRKKNPGNALLEYRGNAGSHDLKLSVETLEALSKLTKEGLKM------KSAYSGRGDRA 309
Cdd:PLN03046 240 GRKSATLSIDDFYLTAEGQAELRERNPGNALLELRGNAGSHDLQFSVETLEALSKLTKEGIKMkvprydKSAYSGRGDRA 319

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334184044 310 DSSTWPEVEGPLSVILFEGWMLGFKPLPADVVKAVDPQLEVVNKNLEAYYDAWDKYIDAWVVIKIQDPSYVYRWRLQAEI 389
Cdd:PLN03046 320 DPSTWPEVEGPLEVILFEGWMLGFKPLPNEVVKAVDPQLEVVNKNLEAYYDAWDKFIDAWVVIKIQDPSCVYQWRLQAEI 399

                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 334184044 390 AMRQDGQAGMSDEEVNDFVSRYLPAYKAYLPTLYAEGPSGSDPDRVLAIDIDEERNPILAN 450
Cdd:PLN03046 400 AMRADGKPGMSDEEVMDFVSRYLPAYKAYLPTLYAEGPSGSDPDHVLVIDIDEERNPILAN 460
 
Name Accession Description Interval E-value
PLN03046 PLN03046
D-glycerate 3-kinase; Provisional
 1-450 0e+00

D-glycerate 3-kinase; Provisional


Pssm-ID: 178608  Cd Length: 460  Bit Score: 916.61  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334184044   1 MAVAISGSSLISSTLQHYNNRIYIRDYPIPCHSS-----NPICNSFNFKRRSFSPSSPKFNDHVVNPSSSYLSSKLSPIR 75
Cdd:PLN03046   1 MAVASSLSSLISSNLQHYMNPIHAADYPIPCASAaafnfNPISNPFNLKRRPYSPSSHKFNDRVAASCSSYPSSKLSSRK 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334184044  76 THSSFAACGCSWIQDNSMVHDYATTtNGTSKRCSALPTTNTVDVSSVSDLFEFICSGPLVNKIGITPQRVGQSIDKWLLY 155
Cdd:PLN03046  81 THLSCPGCGCSWIQDNSMVHDYATT-AATSKRCSSLPTSSPALVSSVQDLYEFICSGPLVDKIGYTPEKIAQSIDKWLLY 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334184044 156 GSQLCRLFQLNELKLTIPQKARLYHYYIPVFIWCEDQIALHNSKFKDGDDVPPLVIGFSAPQGCGKTTLVFALDYLFKTT 235
Cdd:PLN03046 160 GSQLCRLFQLNELKLTEPQKARIYHYYIPVFIWCEDQIAEHRSKFKDGDDIPPLVIGFSAPQGCGKTTLVFALDYLFRVT 239

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334184044 236 KKKSATISVDDFYLTAEGQAELRKKNPGNALLEYRGNAGSHDLKLSVETLEALSKLTKEGLKM------KSAYSGRGDRA 309
Cdd:PLN03046 240 GRKSATLSIDDFYLTAEGQAELRERNPGNALLELRGNAGSHDLQFSVETLEALSKLTKEGIKMkvprydKSAYSGRGDRA 319

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334184044 310 DSSTWPEVEGPLSVILFEGWMLGFKPLPADVVKAVDPQLEVVNKNLEAYYDAWDKYIDAWVVIKIQDPSYVYRWRLQAEI 389
Cdd:PLN03046 320 DPSTWPEVEGPLEVILFEGWMLGFKPLPNEVVKAVDPQLEVVNKNLEAYYDAWDKFIDAWVVIKIQDPSCVYQWRLQAEI 399

                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 334184044 390 AMRQDGQAGMSDEEVNDFVSRYLPAYKAYLPTLYAEGPSGSDPDRVLAIDIDEERNPILAN 450
Cdd:PLN03046 400 AMRADGKPGMSDEEVMDFVSRYLPAYKAYLPTLYAEGPSGSDPDHVLVIDIDEERNPILAN 460
Tda10 COG4240
Pantothenate kinase-related protein Tda10 (topoisomerase I damage affected protein) [General ...
 157-447 8.31e-50

Pantothenate kinase-related protein Tda10 (topoisomerase I damage affected protein) [General function prediction only];


Pssm-ID: 443382  Cd Length: 298  Bit Score: 171.19  E-value: 8.31e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334184044 157 SQLCRLFQLNELKLTIPQKarlyhYYIPVFIWCEDQIALHNSkfkdgddvpPLVIGFSAPQGCGKTTLVFALDYLFKTTK 236
Cdd:COG4240   10 RQFCQQHQLPEDFLETLWR-----LWLPLAEQLADHRQQLGR---------PLIVGINGGQGSGKSTLAAFLALILEQLG 75

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334184044 237 KKSATISVDDFYLT-AEGQAELRKKNPgnaLLEYRGNAGSHDLKLSVETLEALSKLtKEGLKM------KSAYSGRGDRa 309
Cdd:COG4240   76 LRVAVLSIDDLYLTrAERQALAEQVHP---LLITRGVPGTHDVELGLQVLDQLRAG-KPGQPVslprfdKSADDRAPDR- 150

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334184044 310 dssTWPEVEGPLSVILFEGWMLGFKPLPADVVKAVDPQLEV-----------VNKNLEAYYDA-WDKyIDAWVVIKIQDP 377
Cdd:COG4240  151 ---QWPEIVGPVDIVLFEGWCVGARPQDEAALAQPVNPLEAeedpdgvwrryVNQQLAGDYLPlWER-LDRLIMLKAPDF 226

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 334184044 378 SYVYRWRLQAEIAMRQ--DGQAGMSDEEVNDFVSRYLpayKAYLPTLYAEgPSGSDpdrvLAIDIDEERNPI 447
Cdd:COG4240  227 RLVYQWRLEQEQKLIArgDGKGGMSDAQIERFVQHYQ---RLTHPALFIL-PARAD----LVVELDADHRIT 290
PRK pfam00485
Phosphoribulokinase / Uridine kinase family; This family matches three types of P-loop ...
 210-419 3.37e-05

Phosphoribulokinase / Uridine kinase family; This family matches three types of P-loop containing kinases: phosphoribulokinases, uridine kinases and bacterial pantothenate kinases(CoaA). Arabidopsis and other organizms have a dual uridine kinase/uracil phosphoribosyltransferase protein where the N-terminal region consists of a UK domain and the C-terminal region of a UPRT domain.


Pssm-ID: 425711 [Multi-domain]  Cd Length: 196  Bit Score: 44.70  E-value: 3.37e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334184044  210 VIGFSAPQGCGKTTLVFALDYLFKTTKKKSATI------SVDDFYLTAEGQAELRKKNPGNALLEYRGNagshDLKLSVE 283
Cdd:pfam00485   1 VIGVAGSSGSGKTTVARRIVSIFGREGVPAVGIegdsfhSTDRFYMDLHPEDRKRAGNNGYSFDGPEAN----DFDLLYE 76

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334184044  284 TLEALskltKEGLK-MKSAYSGRGDRADSstWPEVEGPLSVILFEGWMLGF----KPLPaDVVKAVDPQLEVvnknleay 358
Cdd:pfam00485  77 QFKEL----KEGGSvDKPIYNHVTHERDP--TPELIEGADVLVIEGLHALYdervAQLL-DLKIYVDPDIDL-------- 141

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 334184044  359 ydawdKYIdawvvikiqdpsyvyrWRLQAEIAMRqdgqaGMSDEEVNDFVSRYLPAYKAYL 419
Cdd:pfam00485 142 -----ELA----------------RKIQRDMAER-----GHSLEGVTDSILFRKPDYVNYI 176
 
Name Accession Description Interval E-value
PLN03046 PLN03046
D-glycerate 3-kinase; Provisional
 1-450 0e+00

D-glycerate 3-kinase; Provisional


Pssm-ID: 178608  Cd Length: 460  Bit Score: 916.61  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334184044   1 MAVAISGSSLISSTLQHYNNRIYIRDYPIPCHSS-----NPICNSFNFKRRSFSPSSPKFNDHVVNPSSSYLSSKLSPIR 75
Cdd:PLN03046   1 MAVASSLSSLISSNLQHYMNPIHAADYPIPCASAaafnfNPISNPFNLKRRPYSPSSHKFNDRVAASCSSYPSSKLSSRK 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334184044  76 THSSFAACGCSWIQDNSMVHDYATTtNGTSKRCSALPTTNTVDVSSVSDLFEFICSGPLVNKIGITPQRVGQSIDKWLLY 155
Cdd:PLN03046  81 THLSCPGCGCSWIQDNSMVHDYATT-AATSKRCSSLPTSSPALVSSVQDLYEFICSGPLVDKIGYTPEKIAQSIDKWLLY 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334184044 156 GSQLCRLFQLNELKLTIPQKARLYHYYIPVFIWCEDQIALHNSKFKDGDDVPPLVIGFSAPQGCGKTTLVFALDYLFKTT 235
Cdd:PLN03046 160 GSQLCRLFQLNELKLTEPQKARIYHYYIPVFIWCEDQIAEHRSKFKDGDDIPPLVIGFSAPQGCGKTTLVFALDYLFRVT 239

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334184044 236 KKKSATISVDDFYLTAEGQAELRKKNPGNALLEYRGNAGSHDLKLSVETLEALSKLTKEGLKM------KSAYSGRGDRA 309
Cdd:PLN03046 240 GRKSATLSIDDFYLTAEGQAELRERNPGNALLELRGNAGSHDLQFSVETLEALSKLTKEGIKMkvprydKSAYSGRGDRA 319

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334184044 310 DSSTWPEVEGPLSVILFEGWMLGFKPLPADVVKAVDPQLEVVNKNLEAYYDAWDKYIDAWVVIKIQDPSYVYRWRLQAEI 389
Cdd:PLN03046 320 DPSTWPEVEGPLEVILFEGWMLGFKPLPNEVVKAVDPQLEVVNKNLEAYYDAWDKFIDAWVVIKIQDPSCVYQWRLQAEI 399

                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 334184044 390 AMRQDGQAGMSDEEVNDFVSRYLPAYKAYLPTLYAEGPSGSDPDRVLAIDIDEERNPILAN 450
Cdd:PLN03046 400 AMRADGKPGMSDEEVMDFVSRYLPAYKAYLPTLYAEGPSGSDPDHVLVIDIDEERNPILAN 460
PLN02796 PLN02796
D-glycerate 3-kinase
 109-449 0e+00

D-glycerate 3-kinase


Pssm-ID: 215427  Cd Length: 347  Bit Score: 666.83  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334184044 109 SALPTTNTVDVSSVSDLFEFICSGPLVNKIGITPQRVGQSIDKWLLYGSQLCRLFQLNELKLTIPQKARLYHYYIPVFIW 188
Cdd:PLN02796   1 GSLFPSTPPDVSDVADLREFICSGPLISKLGLTAEDVAESIDEWIAHGLRLCRLLQFDELSLSASQKARVYHYYLPVYLW 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334184044 189 CEDQIALHNSKFKDGDDVPPLVIGFSAPQGCGKTTLVFALDYLFKTTKKKSATISVDDFYLTAEGQAELRKKNPGNALLE 268
Cdd:PLN02796  81 CEDQLEAHRSKFKDGDEIPPLVIGISAPQGCGKTTLVFALVYLFNATGRRAASLSIDDFYLTAADQAKLAEANPGNALLE 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334184044 269 YRGNAGSHDLKLSVETLEALSKLTKEGLKM------KSAYSGRGDRADSSTWPEVEGPLSVILFEGWMLGFKPLPADVVK 342
Cdd:PLN02796 161 LRGNAGSHDLALGVETLEALRKLNKEGSKMkvprydKSAYGGRGDRADPSTWPEVEGPLDVVLFEGWMLGFKPLGPDAVK 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334184044 343 AVDPQLEVVNKNLEAYYDAWDKYIDAWVVIKIQDPSYVYRWRLQAEIAMRQDGQAGMSDEEVNDFVSRYLPAYKAYLPTL 422
Cdd:PLN02796 241 AVDPQLEVVNKNLEAYYDAWDKLVDSWIVIKVDDPSWVYEWRLQAEIAMRAKGKPGMSDEEVADFVSRYMPAYKAYLPGL 320

                        330       340
                 ....*....|....*....|....*..
gi 334184044 423 YAEGPSGSDPDRVLAIDIDEERNPILA 449
Cdd:PLN02796 321 YAEGPGGSDPDNVLVIEIDENRNPLGV 347
Tda10 COG4240
Pantothenate kinase-related protein Tda10 (topoisomerase I damage affected protein) [General ...
 157-447 8.31e-50

Pantothenate kinase-related protein Tda10 (topoisomerase I damage affected protein) [General function prediction only];


Pssm-ID: 443382  Cd Length: 298  Bit Score: 171.19  E-value: 8.31e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334184044 157 SQLCRLFQLNELKLTIPQKarlyhYYIPVFIWCEDQIALHNSkfkdgddvpPLVIGFSAPQGCGKTTLVFALDYLFKTTK 236
Cdd:COG4240   10 RQFCQQHQLPEDFLETLWR-----LWLPLAEQLADHRQQLGR---------PLIVGINGGQGSGKSTLAAFLALILEQLG 75

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334184044 237 KKSATISVDDFYLT-AEGQAELRKKNPgnaLLEYRGNAGSHDLKLSVETLEALSKLtKEGLKM------KSAYSGRGDRa 309
Cdd:COG4240   76 LRVAVLSIDDLYLTrAERQALAEQVHP---LLITRGVPGTHDVELGLQVLDQLRAG-KPGQPVslprfdKSADDRAPDR- 150

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334184044 310 dssTWPEVEGPLSVILFEGWMLGFKPLPADVVKAVDPQLEV-----------VNKNLEAYYDA-WDKyIDAWVVIKIQDP 377
Cdd:COG4240  151 ---QWPEIVGPVDIVLFEGWCVGARPQDEAALAQPVNPLEAeedpdgvwrryVNQQLAGDYLPlWER-LDRLIMLKAPDF 226

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 334184044 378 SYVYRWRLQAEIAMRQ--DGQAGMSDEEVNDFVSRYLpayKAYLPTLYAEgPSGSDpdrvLAIDIDEERNPI 447
Cdd:COG4240  227 RLVYQWRLEQEQKLIArgDGKGGMSDAQIERFVQHYQ---RLTHPALFIL-PARAD----LVVELDADHRIT 290
PRK pfam00485
Phosphoribulokinase / Uridine kinase family; This family matches three types of P-loop ...
 210-419 3.37e-05

Phosphoribulokinase / Uridine kinase family; This family matches three types of P-loop containing kinases: phosphoribulokinases, uridine kinases and bacterial pantothenate kinases(CoaA). Arabidopsis and other organizms have a dual uridine kinase/uracil phosphoribosyltransferase protein where the N-terminal region consists of a UK domain and the C-terminal region of a UPRT domain.


Pssm-ID: 425711 [Multi-domain]  Cd Length: 196  Bit Score: 44.70  E-value: 3.37e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334184044  210 VIGFSAPQGCGKTTLVFALDYLFKTTKKKSATI------SVDDFYLTAEGQAELRKKNPGNALLEYRGNagshDLKLSVE 283
Cdd:pfam00485   1 VIGVAGSSGSGKTTVARRIVSIFGREGVPAVGIegdsfhSTDRFYMDLHPEDRKRAGNNGYSFDGPEAN----DFDLLYE 76

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334184044  284 TLEALskltKEGLK-MKSAYSGRGDRADSstWPEVEGPLSVILFEGWMLGF----KPLPaDVVKAVDPQLEVvnknleay 358
Cdd:pfam00485  77 QFKEL----KEGGSvDKPIYNHVTHERDP--TPELIEGADVLVIEGLHALYdervAQLL-DLKIYVDPDIDL-------- 141

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 334184044  359 ydawdKYIdawvvikiqdpsyvyrWRLQAEIAMRqdgqaGMSDEEVNDFVSRYLPAYKAYL 419
Cdd:pfam00485 142 -----ELA----------------RKIQRDMAER-----GHSLEGVTDSILFRKPDYVNYI 176
Udk COG0572
Uridine kinase [Nucleotide transport and metabolism]; Uridine kinase is part of the Pathway ...
 207-419 3.66e-03

Uridine kinase [Nucleotide transport and metabolism]; Uridine kinase is part of the Pathway/BioSystem: Pyrimidine salvage


Pssm-ID: 440337 [Multi-domain]  Cd Length: 206  Bit Score: 38.67  E-value: 3.66e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334184044 207 PPLVIGFSAPQGCGKTTLVFALDYLFKttKKKSATISVDDFYltaegqaelrkKNPGNALLEYRGNAG-----SHDLKLS 281
Cdd:COG0572    6 KPRIIGIAGPSGSGKTTFARRLAEQLG--ADKVVVISLDDYY-----------KDREHLPLDERGKPNfdhpeAFDLDLL 72

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334184044 282 VETLEALSKlTKEGLKMKSAYSgRGDRadSSTWPEVEgPLSVILFEGwMLGFKPlpadvvkavdpqlevvnknlEAYYDA 361
Cdd:COG0572   73 NEHLEPLKA-GESVELPVYDFA-TGTR--SGETVKVE-PADVIIVEG-IHALND--------------------ELLRDL 126

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 334184044 362 WD-K-YIDAwvvikiqDPSYVYRWRLQAEIAMRqdgqaGMSDEEV-NDFVSRYLPAYKAYL 419
Cdd:COG0572  127 LDlKiYVDA-------DTDVRLIRRIVRDGEER-----GRTAESViEQYWATVRPGHEQYI 175
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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