|
Name |
Accession |
Description |
Interval |
E-value |
| SecA |
COG0653 |
Preprotein translocase subunit SecA (ATPase, RNA helicase) [Intracellular trafficking, ... |
83-1043 |
0e+00 |
|
Preprotein translocase subunit SecA (ATPase, RNA helicase) [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 440418 [Multi-domain] Cd Length: 876 Bit Score: 1007.25 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 83 VRDYYRLVESVNSLEPQIQSLSDEQLKAKTAEFRERLARGESLADMQAEAFAVVREAAKRTIGMRHFDVQIIGGGVLHDG 162
Cdd:COG0653 17 LKRLRKIVDKINALEPEMEALSDEELRAKTDEFKERLANGETLDDLLPEAFAVVREASKRVLGMRHFDVQLIGGIVLHQG 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 163 SIAEMKTGEGKTLVSTLAAYLNALTGEGVHVVTVNDYLAQRDAEWMGRVHRFLGLSVGLIQRGMKAEERKFNYSCDITYT 242
Cdd:COG0653 97 KIAEMKTGEGKTLVATLPAYLNALTGKGVHVVTVNDYLAKRDAEWMGRLYRFLGLSVGVIVHGMDPEERRAAYAADITYG 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 243 NNSELGFDYLRDNLTSNREQLVMRwpkPFHFAIVDEVDSVLIDEGRNPLLISGEANENAARYPVAAKVAELLVKDSHYKV 322
Cdd:COG0653 177 TNNEFGFDYLRDNMVFSLEDMVQR---GLNYAIVDEVDSILIDEARTPLIISGPAEDSTDLYYRINKLVPRLKRDGDYTV 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 323 ELKENSVELTEEGISLAEMALETGDLWD-ENDPWARFVMNALKAKEFYKRDVQYIVRDGKALIINELTGRVEDKRRWSEG 401
Cdd:COG0653 254 DEKARTVTLTEEGIEKVEKLLGIDNLYDpENIELVHHLNQALRAHALFKRDVDYIVKDGEVVIVDEFTGRLMPGRRYSDG 333
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 402 VHQAVEAKEGLEIQADSIVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQIPVIEVPTNLSNIRIDLPIQAFATAR 481
Cdd:COG0653 334 LHQAIEAKEGVKIQNENQTLASITFQNYFRMYEKLAGMTGTADTEAEEFREIYGLDVVVIPTNRPMIRKDEPDLVYKTEE 413
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 482 GKWEHVRREVEDMFGQGRPVLVGTTSVENSEYLSELLKEWGIPHNVLNArpKYAAREADFIAQAGRKYAITISTNMAGRG 561
Cdd:COG0653 414 EKFNAVVEDIKERHEKGQPVLVGTTSIEKSELLSKLLKKEGIPHNVLNA--KQHEREAEIVAQAGRPGAVTIATNMAGRG 491
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 562 TDIILGGNPKMLAREIIEDSILSYltsevladnidddelsQKVLSKIKvgpsslallaraslmakyvgkseskswtrkka 641
Cdd:COG0653 492 TDIVLGGNPEFLAAAELADRGLEW----------------EEAIAKIK-------------------------------- 523
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 642 ksvvtesleksqtmdpmelqnlineqsemyplgpaialaylsvlKDCEAhcLHEgsEVKRLGGLHVIGTSLHESRRIDNQ 721
Cdd:COG0653 524 --------------------------------------------AEWQA--EHE--EVLEAGGLHVIGTERHESRRIDNQ 555
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 722 LRGRAGRQGDPGSTRFMISLQDEMFQKFNfdTEWAVRLISKITNDEDLPIEGDTIVKQLLALQINAEKYFFGIRKSLVEF 801
Cdd:COG0653 556 LRGRSGRQGDPGSSRFYLSLEDDLMRIFG--SDRIKGMMDKLGMEEGEPIEHKMVSKAIENAQKKVEGRNFDIRKNLLEY 633
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 802 DEVLEVQRKHVYDLRQLLLTGENesCSQHIFQYMQAVVDEIVVGNSNPQKHPRYWSLAKLLKEFMAISGnlLDESFSGIT 881
Cdd:COG0653 634 DDVMNDQRKVIYEQRREILEGED--LSETILDMREDVIEDLVDEYIPEGSYPEQWDLEGLEEALKELFG--LDLPIEEWL 709
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 882 EEtmlqslENLHEgssiemEDlslphlpkppnafrgirrknsslrrwldicsdnltgsgsyrtlinlLRKFLGDYLIASY 961
Cdd:COG0653 710 DE------EGLDE------EE----------------------------------------------LRERLLEAADEAY 731
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 962 LNvvQESGFDDGYIKEIERAVLLKTLDCYWRDHLVNMNKLSSAVNVRSFAHRNPLEEYKIDGCRFFISMLSATRRLTVES 1041
Cdd:COG0653 732 EE--KEEELGPEVMRELERVVLLQVLDRKWREHLDAMDHLRQGIGLRGYAQKDPLVEYKREAFELFEEMLDSIKEEVVRY 809
|
..
gi 334182752 1042 IL 1043
Cdd:COG0653 810 LF 811
|
|
| PRK12904 |
PRK12904 |
preprotein translocase subunit SecA; Reviewed |
75-1044 |
0e+00 |
|
preprotein translocase subunit SecA; Reviewed
Pssm-ID: 237259 [Multi-domain] Cd Length: 830 Bit Score: 997.67 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 75 FTSMNYWVVRDYYRLVESVNSLEPQIQSLSDEQLKAKTAEFRERLARGESLADMQAEAFAVVREAAKRTIGMRHFDVQII 154
Cdd:PRK12904 9 FGSRNDRELKRLRKIVDKINALEPEMEKLSDEELKAKTAEFKERLAKGETLDDLLPEAFAVVREASKRVLGMRHFDVQLI 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 155 GGGVLHDGSIAEMKTGEGKTLVSTLAAYLNALTGEGVHVVTVNDYLAQRDAEWMGRVHRFLGLSVGLIQRGMKAEERKFN 234
Cdd:PRK12904 89 GGMVLHEGKIAEMKTGEGKTLVATLPAYLNALTGKGVHVVTVNDYLAKRDAEWMGPLYEFLGLSVGVILSGMSPEERREA 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 235 YSCDITYTNNSELGFDYLRDNLTSNREQLVMRwpkPFHFAIVDEVDSVLIDEGRNPLLISGEANENAARYPVAAKVAELL 314
Cdd:PRK12904 169 YAADITYGTNNEFGFDYLRDNMVFSLEERVQR---GLNYAIVDEVDSILIDEARTPLIISGPAEDSSELYKRANKIVPTL 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 315 VKDSHYKVELKENSVELTEEGISLAEMALETGDLWD-ENDPWARFVMNALKAKEFYKRDVQYIVRDGKALIINELTGRVE 393
Cdd:PRK12904 246 EKEGDYTVDEKSRTVGLTEEGIEKAEKLLGIENLYDpENIALVHHLNQALRAHELFKRDVDYIVKDGEVVIVDEFTGRLM 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 394 DKRRWSEGVHQAVEAKEGLEIQADSIVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQIPVIEVPTNLSNIRIDLP 473
Cdd:PRK12904 326 PGRRYSDGLHQAIEAKEGVKIQNENQTLASITFQNYFRMYEKLAGMTGTADTEAEEFREIYNLDVVVIPTNRPMIRIDHP 405
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 474 IQAFATARGKWEHVRREVEDMFGQGRPVLVGTTSVENSEYLSELLKEWGIPHNVLNArpKYAAREADFIAQAGRKYAITI 553
Cdd:PRK12904 406 DLIYKTEKEKFDAVVEDIKERHKKGQPVLVGTVSIEKSELLSKLLKKAGIPHNVLNA--KNHEREAEIIAQAGRPGAVTI 483
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 554 STNMAGRGTDIILGGNPKMLAREIIEdsilsyltsevladnidddELSQKVLSKIKvgpsslallaraslmakyvgkses 633
Cdd:PRK12904 484 ATNMAGRGTDIKLGGNPEMLAAALLE-------------------EETEEQIAKIK------------------------ 520
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 634 kswtrkkaksvvtesleksqtmdpmelqnlineqsemyplgpaialaylsvlKDCEAhcLHEgsEVKRLGGLHVIGTSLH 713
Cdd:PRK12904 521 ----------------------------------------------------AEWQE--EHE--EVLEAGGLHVIGTERH 544
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 714 ESRRIDNQLRGRAGRQGDPGSTRFMISLQDEMFQKFNfdTEWAVRLISKITNDEDLPIEGDTIVKQLLALQINAEKYFFG 793
Cdd:PRK12904 545 ESRRIDNQLRGRSGRQGDPGSSRFYLSLEDDLMRIFG--SDRVKGMMDRLGMKEGEAIEHKMVTRAIENAQKKVEGRNFD 622
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 794 IRKSLVEFDEVLEVQRKHVYDLRQLLLTGENesCSQHIFQYMQAVVDEIVVGNSNPQKHPRYWSLAKL---LKEFMAISG 870
Cdd:PRK12904 623 IRKQLLEYDDVMNDQRKVIYAQRNEILEGED--LSETILDMREDVIEDLVDAYIPPGSYEEDWDLEGLeeaLKTDFGLEL 700
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 871 NLLDESFSGITEETMLQSLENLhegssiemedlslphlpkppnafrgirrknsslrrwldicsdnltgsgsyrtlinllr 950
Cdd:PRK12904 701 PIEEWLEEGLDEEELRERILEA---------------------------------------------------------- 722
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 951 kflgdyLIASYLNvvQESGFDDGYIKEIERAVLLKTLDCYWRDHLVNMNKLSSAVNVRSFAHRNPLEEYKIDGCRFFISM 1030
Cdd:PRK12904 723 ------AEEAYEE--KEEELGEEQMREFERVVMLQVLDTKWREHLAAMDHLRQGIGLRGYAQKDPLQEYKREGFELFEEM 794
|
970
....*....|....
gi 334182752 1031 LSATRRLTVESILQ 1044
Cdd:PRK12904 795 LDSIKEEVVRTLMK 808
|
|
| secA |
TIGR00963 |
preprotein translocase, SecA subunit; The proteins SecA-F and SecY, not all of which are ... |
93-1031 |
0e+00 |
|
preprotein translocase, SecA subunit; The proteins SecA-F and SecY, not all of which are necessary, comprise the standard prokaryotic protein translocation apparatus. Other, specialized translocation systems also exist but are not as broadly distributed. This model describes SecA, an essential member of the apparatus. This model excludes SecA2 of the accessory secretory system. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 273366 [Multi-domain] Cd Length: 742 Bit Score: 907.40 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 93 VNSLEPQIQSLSDEQLKAKTAEFRERLA-RGESLADMQAEAFAVVREAAKRTIGMRHFDVQIIGGGVLHDGSIAEMKTGE 171
Cdd:TIGR00963 1 INALEEDYEKLSDEELRNKTNEFKDRLAkQGETLDDLLPEAFAVVREASKRVLGMRPFDVQLIGGIALHKGKIAEMKTGE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 172 GKTLVSTLAAYLNALTGEGVHVVTVNDYLAQRDAEWMGRVHRFLGLSVGLIQRGMKAEERKFNYSCDITYTNNSELGFDY 251
Cdd:TIGR00963 81 GKTLTATLPAYLNALTGKGVHVVTVNDYLAQRDAEWMGQVYRFLGLSVGLILSGMSPEERREAYACDITYGTNNELGFDY 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 252 LRDNLTSNREQLVMRwpkPFHFAIVDEVDSVLIDEGRNPLLISGEANENAARYPVAAKVAELLVKDSHYKVELKENSVEL 331
Cdd:TIGR00963 161 LRDNMAHSKEEKVQR---PFHFAIIDEVDSILIDEARTPLIISGPAEKSTELYVQANKFAKALEKEVDYEVDEKNRAVLL 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 332 TEEGISLAEMALETGDLWD-ENDPWARFVMNALKAKEFYKRDVQYIVRDGKALIINELTGRVEDKRRWSEGVHQAVEAKE 410
Cdd:TIGR00963 238 TEQGMKKAEDLLGVDNLYDlENSPLIHYINNALKAKELFQKDVDYIVRDGEVVIVDEFTGRIMEGRRWSDGLHQAIEAKE 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 411 GLEIQADSIVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQIPVIEVPTNLSNIRIDLPIQAFATARGKWEHVRRE 490
Cdd:TIGR00963 318 GVEIQNENQTLATITYQNFFRLYEKLSGMTGTAKTEEEEFRKIYNLEVVVVPTNRPVIRKDRPDLVYKTEEEKWKAVVEE 397
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 491 VEDMFGQGRPVLVGTTSVENSEYLSELLKEWGIPHNVLNArpKYAAREADFIAQAGRKYAITISTNMAGRGTDIILggnp 570
Cdd:TIGR00963 398 IKERHAKGQPVLVGTTSVEKSELLSNLLKERGIPHNVLNA--KNHEREAEIIAQAGRKGAVTIATNMAGRGTDIKL---- 471
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 571 kmlareiiedsilsyltsevladnidddelsqkvlskikvgpsslallaraslmakyvgkseskswtrkkaksvvtesle 650
Cdd:TIGR00963 --------------------------------------------------------------------------------
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 651 ksqtmdpmelqnlineqsemyplgpaialaylsvlkdceahclhegSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQG 730
Cdd:TIGR00963 472 ----------------------------------------------EEVKELGGLYVIGTERHESRRIDNQLRGRSGRQG 505
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 731 DPGSTRFMISLQDEMFQKFNFDTewAVRLISKITNDEDLPIEGDTIVKQLLALQINAEKYFFGIRKSLVEFDEVLEVQRK 810
Cdd:TIGR00963 506 DPGSSRFFLSLEDNLMRIFGGDR--LEGLMRRLGMDDDEPIESKMVSRALESAQKRVEGRNFDIRKQLLEYDDVLNKQRE 583
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 811 HVYDLRQLLLTGENesCSQHIFQYMQAVVDEIVVGNSNPQKHPRYWSLAKL---LKEFMAISGNLLDESFSGITEETmlq 887
Cdd:TIGR00963 584 VIYAERRRVLESED--LSELILQMLESTLDRIVDAYINEEKLSEEWDLEGLiekLKTLFLLDGDLTPEDLENLTSED--- 658
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 888 slenlhegssiemedlslphlpkppnafrgirrknsslrrwldicsdnltgsgsyrtlinlLRKFLGDYLIASYLnvVQE 967
Cdd:TIGR00963 659 -------------------------------------------------------------LKELLLEKIRAAYD--EKE 675
|
890 900 910 920 930 940
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 334182752 968 SGFDDGYIKEIERAVLLKTLDCYWRDHLVNMNKLSSAVNVRSFAHRNPLEEYKIDGCRFFISML 1031
Cdd:TIGR00963 676 EQLESERMREFERYVLLQSIDRKWKEHLDAMDLLREGIGLRSYGQKDPLIEYKNEGFNLFEEML 739
|
|
| SecA_DEAD |
smart00957 |
SecA DEAD-like domain; SecA protein binds to the plasma membrane where it interacts with ... |
75-451 |
0e+00 |
|
SecA DEAD-like domain; SecA protein binds to the plasma membrane where it interacts with proOmpA to support translocation of proOmpA through the membrane. SecA protein achieves this translocation, in association with SecY protein, in an ATP dependent manner. This domain represents the N-terminal ATP-dependent helicase domain, which is related to the.
Pssm-ID: 214937 [Multi-domain] Cd Length: 380 Bit Score: 661.43 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 75 FTSMNYWVVRDYYRLVESVNSLEPQIQSLSDEQLKAKTAEFRERLARGESLADMQAEAFAVVREAAKRTIGMRHFDVQII 154
Cdd:smart00957 5 FGSKNDRELKRLRKIVDQINALEPEMEALSDEELRAKTAEFKERLAEGESLDDLLPEAFAVVREAAKRVLGMRHFDVQLI 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 155 GGGVLHDGSIAEMKTGEGKTLVSTLAAYLNALTGEGVHVVTVNDYLAQRDAEWMGRVHRFLGLSVGLIQRGMKAEERKFN 234
Cdd:smart00957 85 GGIVLHEGKIAEMKTGEGKTLVATLPAYLNALTGKGVHVVTVNDYLAKRDAEWMGPLYEFLGLTVGVIVSGMSPEERRAA 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 235 YSCDITYTNNSELGFDYLRDNLTSNREQLVMRwpkPFHFAIVDEVDSVLIDEGRNPLLISGEA-NENAARYPVAAKVAEL 313
Cdd:smart00957 165 YAADITYGTNNEFGFDYLRDNMAFSKEDKVQR---GLNYAIVDEVDSILIDEARTPLIISGPAeDESSDLYHRADKFVPR 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 314 LVKDSHYKVELKENSVELTEEGISLAEMALETGDLWD-ENDPWARFVMNALKAKEFYKRDVQYIVRDGKALIINELTGRV 392
Cdd:smart00957 242 LKEDEDYTVDEKSRTVELTEEGIEKAEKLLGIDNLYDpENIELLHHVNQALRAHYLFKRDVDYIVRDGEVVIVDEFTGRV 321
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 334182752 393 EDKRRWSEGVHQAVEAKEGLEIQADSIVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFL 451
Cdd:smart00957 322 MEGRRYSDGLHQAIEAKEGVEIQEENQTLATITFQNYFRMYKKLSGMTGTAKTEAEEFR 380
|
|
| SecA_DEAD |
pfam07517 |
SecA DEAD-like domain; SecA protein binds to the plasma membrane where it interacts with ... |
75-451 |
0e+00 |
|
SecA DEAD-like domain; SecA protein binds to the plasma membrane where it interacts with proOmpA to support translocation of proOmpA through the membrane. SecA protein achieves this translocation, in association with SecY protein, in an ATP dependent manner. This domain represents the N-terminal ATP-dependent helicase domain, which is related to the pfam00270.
Pssm-ID: 462190 [Multi-domain] Cd Length: 379 Bit Score: 629.14 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 75 FTSMNYWVVRDYYRLVESVNSLEPQIQSLSDEQLKAKTAEFRERLARGESLADMQAEAFAVVREAAKRTIGMRHFDVQII 154
Cdd:pfam07517 5 FGSPNERDLKRLRKIVDQINALEEELKALSDEELRAKTDELRERLREGESLDDILPEAFALVREAAKRVLGMRHYDVQLI 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 155 GGGVLHDGSIAEMKTGEGKTLVSTLAAYLNALTGEGVHVVTVNDYLAQRDAEWMGRVHRFLGLSVGLIQRGMKAEERKFN 234
Cdd:pfam07517 85 GGLVLHEGKIAEMKTGEGKTLTATLPAYLNALSGKGVHVVTVNDYLAKRDAEWMGPLYEFLGLTVGVITSDMDPEERRAA 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 235 YSCDITYTNNSELGFDYLRDNLTSNREQLVMRwpkPFHFAIVDEVDSVLIDEGRNPLLISGEANENAARYPVAAKVAELL 314
Cdd:pfam07517 165 YNADITYGTNNELGFDYLRDNMATSKEDKVQR---GLNFAIVDEVDSILIDEARTPLIISGPSEDDSELYREADRLVKSL 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 315 VKDSHYKVELKENSVELTEEGISLAEMALETGDLWD-ENDPWARFVMNALKAKEFYKRDVQYIVRDGKALIINELTGRVE 393
Cdd:pfam07517 242 EEDGDYEIDEKSKNVELTEKGIEKIEKLLGIDNLYDpENVELLHHINQALKAHHLFKRDVDYIVRDGEVVIVDEFTGRVM 321
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 334182752 394 DKRRWSEGVHQAVEAKEGLEIQADSIVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFL 451
Cdd:pfam07517 322 PGRRWSDGLHQAIEAKEGVEITPESQTLASITYQNFFRLYPKLSGMTGTAKTEAEEFR 379
|
|
| DEXDc_SecA |
cd17928 |
DEXD-box helicase domain of SecA; SecA is a part of the Sec translocase that transports the ... |
107-463 |
2.06e-125 |
|
DEXD-box helicase domain of SecA; SecA is a part of the Sec translocase that transports the vast majority of bacterial and ER-exported proteins. SecA binds both the signal sequence and the mature domain of the preprotein emerging from the ribosome. SecA belongs to the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
Pssm-ID: 350686 [Multi-domain] Cd Length: 230 Bit Score: 381.50 E-value: 2.06e-125
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 107 QLKAKTAEFRERLARGESLADMQAEAFAVVREAAKRTIGMRHFDVQIIGGGVLHDGSIAEMKTGEGKTLVSTLAAYLNAL 186
Cdd:cd17928 1 ELRAKTDELRERLAKGETLDDLLPEAFALVREAARRVLGMRPFDVQLIGGLVLHEGKIAEMKTGEGKTLTATLPAYLNAL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 187 TGEGVHVVTVNDYLAQRDAEWMGRVHRFLGLSVGLIQRGMKAEERKFNYSCDITYTNNSELGFDYLRDNLTSNREQLVMR 266
Cdd:cd17928 81 TGKGVHVVTVNDYLARRDAEWMGPLYEFLGLTVGVILSDMSPDERREAYAADITYGTNNELGFDYLRDNMVTSKEDLVQR 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 267 wpkPFHFAIVDEVDSVLIDEGRNPLLISGeanenaarypvaakvaellvkdshykvelkensvelteegislaemaletg 346
Cdd:cd17928 161 ---GLNFAIVDEVDSILIDEARTPLIISG--------------------------------------------------- 186
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 347 dlwdendpwarfvmnalkakefykrdvqyivrdgkaliineltgrvedkrrwsegvhqaveakegleiqadsiVVAQITY 426
Cdd:cd17928 187 -------------------------------------------------------------------------TLATITF 193
|
330 340 350
....*....|....*....|....*....|....*..
gi 334182752 427 QSLFKLYPKLSGMTGTAKTEEKEFLKMFQIPVIEVPT 463
Cdd:cd17928 194 QNYFRLYPKLAGMTGTAKTEAEEFREIYNLDVVVIPT 230
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| SecA |
COG0653 |
Preprotein translocase subunit SecA (ATPase, RNA helicase) [Intracellular trafficking, ... |
83-1043 |
0e+00 |
|
Preprotein translocase subunit SecA (ATPase, RNA helicase) [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 440418 [Multi-domain] Cd Length: 876 Bit Score: 1007.25 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 83 VRDYYRLVESVNSLEPQIQSLSDEQLKAKTAEFRERLARGESLADMQAEAFAVVREAAKRTIGMRHFDVQIIGGGVLHDG 162
Cdd:COG0653 17 LKRLRKIVDKINALEPEMEALSDEELRAKTDEFKERLANGETLDDLLPEAFAVVREASKRVLGMRHFDVQLIGGIVLHQG 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 163 SIAEMKTGEGKTLVSTLAAYLNALTGEGVHVVTVNDYLAQRDAEWMGRVHRFLGLSVGLIQRGMKAEERKFNYSCDITYT 242
Cdd:COG0653 97 KIAEMKTGEGKTLVATLPAYLNALTGKGVHVVTVNDYLAKRDAEWMGRLYRFLGLSVGVIVHGMDPEERRAAYAADITYG 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 243 NNSELGFDYLRDNLTSNREQLVMRwpkPFHFAIVDEVDSVLIDEGRNPLLISGEANENAARYPVAAKVAELLVKDSHYKV 322
Cdd:COG0653 177 TNNEFGFDYLRDNMVFSLEDMVQR---GLNYAIVDEVDSILIDEARTPLIISGPAEDSTDLYYRINKLVPRLKRDGDYTV 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 323 ELKENSVELTEEGISLAEMALETGDLWD-ENDPWARFVMNALKAKEFYKRDVQYIVRDGKALIINELTGRVEDKRRWSEG 401
Cdd:COG0653 254 DEKARTVTLTEEGIEKVEKLLGIDNLYDpENIELVHHLNQALRAHALFKRDVDYIVKDGEVVIVDEFTGRLMPGRRYSDG 333
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 402 VHQAVEAKEGLEIQADSIVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQIPVIEVPTNLSNIRIDLPIQAFATAR 481
Cdd:COG0653 334 LHQAIEAKEGVKIQNENQTLASITFQNYFRMYEKLAGMTGTADTEAEEFREIYGLDVVVIPTNRPMIRKDEPDLVYKTEE 413
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 482 GKWEHVRREVEDMFGQGRPVLVGTTSVENSEYLSELLKEWGIPHNVLNArpKYAAREADFIAQAGRKYAITISTNMAGRG 561
Cdd:COG0653 414 EKFNAVVEDIKERHEKGQPVLVGTTSIEKSELLSKLLKKEGIPHNVLNA--KQHEREAEIVAQAGRPGAVTIATNMAGRG 491
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 562 TDIILGGNPKMLAREIIEDSILSYltsevladnidddelsQKVLSKIKvgpsslallaraslmakyvgkseskswtrkka 641
Cdd:COG0653 492 TDIVLGGNPEFLAAAELADRGLEW----------------EEAIAKIK-------------------------------- 523
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 642 ksvvtesleksqtmdpmelqnlineqsemyplgpaialaylsvlKDCEAhcLHEgsEVKRLGGLHVIGTSLHESRRIDNQ 721
Cdd:COG0653 524 --------------------------------------------AEWQA--EHE--EVLEAGGLHVIGTERHESRRIDNQ 555
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 722 LRGRAGRQGDPGSTRFMISLQDEMFQKFNfdTEWAVRLISKITNDEDLPIEGDTIVKQLLALQINAEKYFFGIRKSLVEF 801
Cdd:COG0653 556 LRGRSGRQGDPGSSRFYLSLEDDLMRIFG--SDRIKGMMDKLGMEEGEPIEHKMVSKAIENAQKKVEGRNFDIRKNLLEY 633
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 802 DEVLEVQRKHVYDLRQLLLTGENesCSQHIFQYMQAVVDEIVVGNSNPQKHPRYWSLAKLLKEFMAISGnlLDESFSGIT 881
Cdd:COG0653 634 DDVMNDQRKVIYEQRREILEGED--LSETILDMREDVIEDLVDEYIPEGSYPEQWDLEGLEEALKELFG--LDLPIEEWL 709
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 882 EEtmlqslENLHEgssiemEDlslphlpkppnafrgirrknsslrrwldicsdnltgsgsyrtlinlLRKFLGDYLIASY 961
Cdd:COG0653 710 DE------EGLDE------EE----------------------------------------------LRERLLEAADEAY 731
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 962 LNvvQESGFDDGYIKEIERAVLLKTLDCYWRDHLVNMNKLSSAVNVRSFAHRNPLEEYKIDGCRFFISMLSATRRLTVES 1041
Cdd:COG0653 732 EE--KEEELGPEVMRELERVVLLQVLDRKWREHLDAMDHLRQGIGLRGYAQKDPLVEYKREAFELFEEMLDSIKEEVVRY 809
|
..
gi 334182752 1042 IL 1043
Cdd:COG0653 810 LF 811
|
|
| PRK12904 |
PRK12904 |
preprotein translocase subunit SecA; Reviewed |
75-1044 |
0e+00 |
|
preprotein translocase subunit SecA; Reviewed
Pssm-ID: 237259 [Multi-domain] Cd Length: 830 Bit Score: 997.67 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 75 FTSMNYWVVRDYYRLVESVNSLEPQIQSLSDEQLKAKTAEFRERLARGESLADMQAEAFAVVREAAKRTIGMRHFDVQII 154
Cdd:PRK12904 9 FGSRNDRELKRLRKIVDKINALEPEMEKLSDEELKAKTAEFKERLAKGETLDDLLPEAFAVVREASKRVLGMRHFDVQLI 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 155 GGGVLHDGSIAEMKTGEGKTLVSTLAAYLNALTGEGVHVVTVNDYLAQRDAEWMGRVHRFLGLSVGLIQRGMKAEERKFN 234
Cdd:PRK12904 89 GGMVLHEGKIAEMKTGEGKTLVATLPAYLNALTGKGVHVVTVNDYLAKRDAEWMGPLYEFLGLSVGVILSGMSPEERREA 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 235 YSCDITYTNNSELGFDYLRDNLTSNREQLVMRwpkPFHFAIVDEVDSVLIDEGRNPLLISGEANENAARYPVAAKVAELL 314
Cdd:PRK12904 169 YAADITYGTNNEFGFDYLRDNMVFSLEERVQR---GLNYAIVDEVDSILIDEARTPLIISGPAEDSSELYKRANKIVPTL 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 315 VKDSHYKVELKENSVELTEEGISLAEMALETGDLWD-ENDPWARFVMNALKAKEFYKRDVQYIVRDGKALIINELTGRVE 393
Cdd:PRK12904 246 EKEGDYTVDEKSRTVGLTEEGIEKAEKLLGIENLYDpENIALVHHLNQALRAHELFKRDVDYIVKDGEVVIVDEFTGRLM 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 394 DKRRWSEGVHQAVEAKEGLEIQADSIVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQIPVIEVPTNLSNIRIDLP 473
Cdd:PRK12904 326 PGRRYSDGLHQAIEAKEGVKIQNENQTLASITFQNYFRMYEKLAGMTGTADTEAEEFREIYNLDVVVIPTNRPMIRIDHP 405
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 474 IQAFATARGKWEHVRREVEDMFGQGRPVLVGTTSVENSEYLSELLKEWGIPHNVLNArpKYAAREADFIAQAGRKYAITI 553
Cdd:PRK12904 406 DLIYKTEKEKFDAVVEDIKERHKKGQPVLVGTVSIEKSELLSKLLKKAGIPHNVLNA--KNHEREAEIIAQAGRPGAVTI 483
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 554 STNMAGRGTDIILGGNPKMLAREIIEdsilsyltsevladnidddELSQKVLSKIKvgpsslallaraslmakyvgkses 633
Cdd:PRK12904 484 ATNMAGRGTDIKLGGNPEMLAAALLE-------------------EETEEQIAKIK------------------------ 520
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 634 kswtrkkaksvvtesleksqtmdpmelqnlineqsemyplgpaialaylsvlKDCEAhcLHEgsEVKRLGGLHVIGTSLH 713
Cdd:PRK12904 521 ----------------------------------------------------AEWQE--EHE--EVLEAGGLHVIGTERH 544
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 714 ESRRIDNQLRGRAGRQGDPGSTRFMISLQDEMFQKFNfdTEWAVRLISKITNDEDLPIEGDTIVKQLLALQINAEKYFFG 793
Cdd:PRK12904 545 ESRRIDNQLRGRSGRQGDPGSSRFYLSLEDDLMRIFG--SDRVKGMMDRLGMKEGEAIEHKMVTRAIENAQKKVEGRNFD 622
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 794 IRKSLVEFDEVLEVQRKHVYDLRQLLLTGENesCSQHIFQYMQAVVDEIVVGNSNPQKHPRYWSLAKL---LKEFMAISG 870
Cdd:PRK12904 623 IRKQLLEYDDVMNDQRKVIYAQRNEILEGED--LSETILDMREDVIEDLVDAYIPPGSYEEDWDLEGLeeaLKTDFGLEL 700
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 871 NLLDESFSGITEETMLQSLENLhegssiemedlslphlpkppnafrgirrknsslrrwldicsdnltgsgsyrtlinllr 950
Cdd:PRK12904 701 PIEEWLEEGLDEEELRERILEA---------------------------------------------------------- 722
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 951 kflgdyLIASYLNvvQESGFDDGYIKEIERAVLLKTLDCYWRDHLVNMNKLSSAVNVRSFAHRNPLEEYKIDGCRFFISM 1030
Cdd:PRK12904 723 ------AEEAYEE--KEEELGEEQMREFERVVMLQVLDTKWREHLAAMDHLRQGIGLRGYAQKDPLQEYKREGFELFEEM 794
|
970
....*....|....
gi 334182752 1031 LSATRRLTVESILQ 1044
Cdd:PRK12904 795 LDSIKEEVVRTLMK 808
|
|
| secA |
CHL00122 |
preprotein translocase subunit SecA; Validated |
79-1043 |
0e+00 |
|
preprotein translocase subunit SecA; Validated
Pssm-ID: 214371 [Multi-domain] Cd Length: 870 Bit Score: 911.30 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 79 NYWVVRDYYRLVESVNSLEPQIQSLSDEQLKAKTAEFRERLARGESLADMQAEAFAVVREAAKRTIGMRHFDVQIIGGGV 158
Cdd:CHL00122 8 NKSKLNKYQTLVNQINLLEEELKNLTDTELRSKTNKLKKRLSNGQNLNKIIPESFALTREASFRTLGLRHFDVQLIGGLV 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 159 LHDGSIAEMKTGEGKTLVSTLAAYLNALTGEGVHVVTVNDYLAQRDAEWMGRVHRFLGLSVGLIQRGMKAEERKFNYSCD 238
Cdd:CHL00122 88 LNDGKIAEMKTGEGKTLVATLPAYLNALTGKGVHIVTVNDYLAKRDQEWMGQIYRFLGLTVGLIQEGMSSEERKKNYLKD 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 239 ITYTNNSELGFDYLRDNLTSNREQLVMRwpkPFHFAIVDEVDSVLIDEGRNPLLISGEANENAARYPVAAKVAELLVKDS 318
Cdd:CHL00122 168 ITYVTNSELGFDYLRDNMALSLSDVVQR---PFNYCIIDEVDSILIDEARTPLIISGQSKTNIDKYIVADELAKYLEKNV 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 319 HYKVELKENSVELTEEGISLAEMALETGDLWDENDPWARFVMNALKAKEFYKRDVQYIVRDGKALIINELTGRVEDKRRW 398
Cdd:CHL00122 245 HYEVDEKNKNVILTEQGILFIEKILKIEDLYSANDPWIPYILNALKAKELFFKNVHYIVRNNEIIIVDEFTGRIMPGRRW 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 399 SEGVHQAVEAKEGLEIQADSIVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQIPVIEVPTNLSNIRIDLPIQAFA 478
Cdd:CHL00122 325 SDGLHQAIEAKENLPIRQETETLASITYQNFFLLYPKLSGMTGTAKTEELEFEKIYNLEVVCIPTHRPMLRKDLPDLIYK 404
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 479 TARGKWEHVRREVEDMFGQGRPVLVGTTSVENSEYLSELLKEWGIPHNVLNARPKYAAREADFIAQAGRKYAITISTNMA 558
Cdd:CHL00122 405 DELSKWRAIADECLQMHQTGRPILIGTTTIEKSELLSQLLKEYRLPHQLLNAKPENVRRESEIVAQAGRKGSITIATNMA 484
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 559 GRGTDIILGGNPKMLAReiiedSILSYLTSEVLADNiDDDELSQKVLSKIKvgpsslaLLARASLMAKYVGKSESKSWTR 638
Cdd:CHL00122 485 GRGTDIILGGNPEFKLK-----KELYDLLLSYKSNE-KISTISQNFLNILN-------SLKNDLKFLSLSDFENLKILNE 551
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 639 KKAKSVVTESLEKSqtmdpmeLQNLINEQSEMYplgpaialaylsvlkdcEAHCLHEGSEVKRLGGLHVIGTSLHESRRI 718
Cdd:CHL00122 552 ASEISIPKNSYQLS-------LRFLYNELLEKY-----------------KKLQEKEKKIVKKLGGLYVIGTERHESRRI 607
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 719 DNQLRGRAGRQGDPGSTRFMISLQDEMFQKFNFDtewAVRLISKITNDEDLPIEGDTIVKQLLALQINAEKYFFGIRKSL 798
Cdd:CHL00122 608 DNQLRGRAGRQGDPGSSRFFLSLEDNLLRIFGGD---KIQNLMQTLNLDDEPLESKLLSKSLDSAQKKVEEYYYDQRKQL 684
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 799 VEFDEVLEVQRKHVYDLRQLLLtgENESCSQHIFQYMQAVVDEIVvgnsnpqkhprywslakllkefmaisgNLLDESfs 878
Cdd:CHL00122 685 FEYDQVLNKQRKAIYSERRKIL--ESQSLRDWILAYGEQVIDDII---------------------------TFLKSR-- 733
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 879 giteetmlqslenlhegssiemedlslphlPKPPNAFRGIRRKNSSLRRwLDICSDNLTGSGSYRtliNLLRKFLGDYLI 958
Cdd:CHL00122 734 ------------------------------KNPNNKFINLINKFKELLK-LPLCFNKSDLNTLNS---GELKKFLYQQFW 779
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 959 ASY-LNVVQESGFDDGYIKEIERAVLLKTLDCYWRDHLVNMNKLSSAVNVRSFAHRNPLEEYKIDGCRFFISMLSATRRL 1037
Cdd:CHL00122 780 ISYdLKELYLEQIGTGLMRELERSLLLQQIDKSWKEHLQKMSLLREAIGWRSYGQKDPLIEYKNEAFNLFINMINHIRHL 859
|
....*.
gi 334182752 1038 TVESIL 1043
Cdd:CHL00122 860 VIYDLF 865
|
|
| secA |
TIGR00963 |
preprotein translocase, SecA subunit; The proteins SecA-F and SecY, not all of which are ... |
93-1031 |
0e+00 |
|
preprotein translocase, SecA subunit; The proteins SecA-F and SecY, not all of which are necessary, comprise the standard prokaryotic protein translocation apparatus. Other, specialized translocation systems also exist but are not as broadly distributed. This model describes SecA, an essential member of the apparatus. This model excludes SecA2 of the accessory secretory system. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 273366 [Multi-domain] Cd Length: 742 Bit Score: 907.40 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 93 VNSLEPQIQSLSDEQLKAKTAEFRERLA-RGESLADMQAEAFAVVREAAKRTIGMRHFDVQIIGGGVLHDGSIAEMKTGE 171
Cdd:TIGR00963 1 INALEEDYEKLSDEELRNKTNEFKDRLAkQGETLDDLLPEAFAVVREASKRVLGMRPFDVQLIGGIALHKGKIAEMKTGE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 172 GKTLVSTLAAYLNALTGEGVHVVTVNDYLAQRDAEWMGRVHRFLGLSVGLIQRGMKAEERKFNYSCDITYTNNSELGFDY 251
Cdd:TIGR00963 81 GKTLTATLPAYLNALTGKGVHVVTVNDYLAQRDAEWMGQVYRFLGLSVGLILSGMSPEERREAYACDITYGTNNELGFDY 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 252 LRDNLTSNREQLVMRwpkPFHFAIVDEVDSVLIDEGRNPLLISGEANENAARYPVAAKVAELLVKDSHYKVELKENSVEL 331
Cdd:TIGR00963 161 LRDNMAHSKEEKVQR---PFHFAIIDEVDSILIDEARTPLIISGPAEKSTELYVQANKFAKALEKEVDYEVDEKNRAVLL 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 332 TEEGISLAEMALETGDLWD-ENDPWARFVMNALKAKEFYKRDVQYIVRDGKALIINELTGRVEDKRRWSEGVHQAVEAKE 410
Cdd:TIGR00963 238 TEQGMKKAEDLLGVDNLYDlENSPLIHYINNALKAKELFQKDVDYIVRDGEVVIVDEFTGRIMEGRRWSDGLHQAIEAKE 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 411 GLEIQADSIVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQIPVIEVPTNLSNIRIDLPIQAFATARGKWEHVRRE 490
Cdd:TIGR00963 318 GVEIQNENQTLATITYQNFFRLYEKLSGMTGTAKTEEEEFRKIYNLEVVVVPTNRPVIRKDRPDLVYKTEEEKWKAVVEE 397
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 491 VEDMFGQGRPVLVGTTSVENSEYLSELLKEWGIPHNVLNArpKYAAREADFIAQAGRKYAITISTNMAGRGTDIILggnp 570
Cdd:TIGR00963 398 IKERHAKGQPVLVGTTSVEKSELLSNLLKERGIPHNVLNA--KNHEREAEIIAQAGRKGAVTIATNMAGRGTDIKL---- 471
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 571 kmlareiiedsilsyltsevladnidddelsqkvlskikvgpsslallaraslmakyvgkseskswtrkkaksvvtesle 650
Cdd:TIGR00963 --------------------------------------------------------------------------------
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 651 ksqtmdpmelqnlineqsemyplgpaialaylsvlkdceahclhegSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQG 730
Cdd:TIGR00963 472 ----------------------------------------------EEVKELGGLYVIGTERHESRRIDNQLRGRSGRQG 505
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 731 DPGSTRFMISLQDEMFQKFNFDTewAVRLISKITNDEDLPIEGDTIVKQLLALQINAEKYFFGIRKSLVEFDEVLEVQRK 810
Cdd:TIGR00963 506 DPGSSRFFLSLEDNLMRIFGGDR--LEGLMRRLGMDDDEPIESKMVSRALESAQKRVEGRNFDIRKQLLEYDDVLNKQRE 583
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 811 HVYDLRQLLLTGENesCSQHIFQYMQAVVDEIVVGNSNPQKHPRYWSLAKL---LKEFMAISGNLLDESFSGITEETmlq 887
Cdd:TIGR00963 584 VIYAERRRVLESED--LSELILQMLESTLDRIVDAYINEEKLSEEWDLEGLiekLKTLFLLDGDLTPEDLENLTSED--- 658
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 888 slenlhegssiemedlslphlpkppnafrgirrknsslrrwldicsdnltgsgsyrtlinlLRKFLGDYLIASYLnvVQE 967
Cdd:TIGR00963 659 -------------------------------------------------------------LKELLLEKIRAAYD--EKE 675
|
890 900 910 920 930 940
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 334182752 968 SGFDDGYIKEIERAVLLKTLDCYWRDHLVNMNKLSSAVNVRSFAHRNPLEEYKIDGCRFFISML 1031
Cdd:TIGR00963 676 EQLESERMREFERYVLLQSIDRKWKEHLDAMDLLREGIGLRSYGQKDPLIEYKNEGFNLFEEML 739
|
|
| secA |
PRK12906 |
preprotein translocase subunit SecA; Reviewed |
83-1033 |
0e+00 |
|
preprotein translocase subunit SecA; Reviewed
Pssm-ID: 237260 [Multi-domain] Cd Length: 796 Bit Score: 800.46 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 83 VRDYYRLVESVNSLEPQIQSLSDEQLKAKTAEFRERLARGESLADMQAEAFAVVREAAKRTIGMRHFDVQIIGGGVLHDG 162
Cdd:PRK12906 16 LKRLEKIADKVNALEDEYEKLSDEQLQAKTPEFRDRIKDGESLDDLLPEAFAVAREGAKRVLGLRPFDVQIIGGIVLHEG 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 163 SIAEMKTGEGKTLVSTLAAYLNALTGEGVHVVTVNDYLAQRDAEWMGRVHRFLGLSVGLIQRGMKAEERKFNYSCDITYT 242
Cdd:PRK12906 96 NIAEMKTGEGKTLTATLPVYLNALTGKGVHVVTVNEYLSSRDATEMGELYRWLGLTVGLNLNSMSPDEKRAAYNCDITYS 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 243 NNSELGFDYLRDNLTSNREQLVMRwpkPFHFAIVDEVDSVLIDEGRNPLLISGEANENAARYPVAAKVAELLVKD----- 317
Cdd:PRK12906 176 TNSELGFDYLRDNMVVYKEQMVQR---PLNYAIVDEVDSILIDEARTPLIISGQAEKATDLYIRADRFVKTLIKDeaedg 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 318 ------SHYKVELKENSVELTEEGISLAEMALETGDLWD-ENDPWARFVMNALKAKEFYKRDVQYIVRDGKALIINELTG 390
Cdd:PRK12906 253 dddedtGDYKIDEKTKTISLTEQGIRKAEKLFGLDNLYDsENTALAHHIDQALRANYIMLKDIDYVVQDGEVLIVDEFTG 332
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 391 RVEDKRRWSEGVHQAVEAKEGLEIQADSIVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQIPVIEVPTNLSNIRI 470
Cdd:PRK12906 333 RVMEGRRYSDGLHQAIEAKEGVKIQEENQTLATITYQNFFRMYKKLSGMTGTAKTEEEEFREIYNMEVITIPTNRPVIRK 412
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 471 DLPIQAFATARGKWEHVRREVEDMFGQGRPVLVGTTSVENSEYLSELLKEWGIPHNVLNArpKYAAREADFIAQAGRKYA 550
Cdd:PRK12906 413 DSPDLLYPTLDSKFNAVVKEIKERHAKGQPVLVGTVAIESSERLSHLLDEAGIPHAVLNA--KNHAKEAEIIMNAGQRGA 490
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 551 ITISTNMAGRGTDIILGGNpkmlareiiedsilsyltsevladnidddelsqkvlskikvgpsslallaraslmakyvgk 630
Cdd:PRK12906 491 VTIATNMAGRGTDIKLGPG------------------------------------------------------------- 509
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 631 seskswtrkkaksvvtesleksqtmdpmelqnlineqsemyplgpaialaylsvlkdceahclhegseVKRLGGLHVIGT 710
Cdd:PRK12906 510 --------------------------------------------------------------------VKELGGLAVIGT 521
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 711 SLHESRRIDNQLRGRAGRQGDPGSTRFMISLQDEMFQKFNFDtewavRLISKI----TNDEDLPIEGDTIVKQLLALQIN 786
Cdd:PRK12906 522 ERHESRRIDNQLRGRSGRQGDPGSSRFYLSLEDDLMRRFGSD-----RVKAFLdrlgMNDDDQVIESRMITRQVESAQKR 596
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 787 AEKYFFGIRKSLVEFDEVLEVQRKHVYDLRQLLLTGEnESCSQHIFQYMQAVVDEIVvgNSNPQKHPRYWSLaKLLKEFM 866
Cdd:PRK12906 597 VEGNNYDTRKQLLQYDDVMREQREVIYKQRMQVINED-KDLKEVLMPMIKRTVDRQV--QMYTQGDKKDWDL-DALRDFI 672
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 867 AIsgnlldesfSGITEETMlqSLENLHEGSSIEMEDlslphlpkppnafrgirrknsslrRWLDICSDNltgsgsyrtli 946
Cdd:PRK12906 673 VS---------AMPDEETF--DFEDLKGKSPEELKK------------------------RLLDIVEDN----------- 706
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 947 nllrkflgdyliasyLNVVQESGFDDGYIKEIERAVLLKTLDCYWRDHLVNMNKLSSAVNVRSFAHRNPLEEYKIDGCRF 1026
Cdd:PRK12906 707 ---------------YAEKEKQLGDPTQMLEFEKVVILRVVDSHWTDHIDAMDQLRQSIGLRGYGQLNPLVEYQEEGYRM 771
|
....*..
gi 334182752 1027 FISMLSA 1033
Cdd:PRK12906 772 FEEMISN 778
|
|
| PRK09200 |
PRK09200 |
preprotein translocase subunit SecA; Reviewed |
83-1058 |
0e+00 |
|
preprotein translocase subunit SecA; Reviewed
Pssm-ID: 236408 [Multi-domain] Cd Length: 790 Bit Score: 772.18 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 83 VRDYYRLVESVNSLEPQIQSLSDEQLKAKTAEFRERLARGESLADMQAEAFAVVREAAKRTIGMRHFDVQIIGGGVLHDG 162
Cdd:PRK09200 14 LKKYRKIVKQINKLEGKMSSLSDEELRQKTIEFKERLASGKTLDDILPEAFAVVREAAKRVLGMRPYDVQLIGALVLHEG 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 163 SIAEMKTGEGKTLVSTLAAYLNALTGEGVHVVTVNDYLAQRDAEWMGRVHRFLGLSVGLIQRGM-KAEERKFNYSCDITY 241
Cdd:PRK09200 94 NIAEMQTGEGKTLTATMPLYLNALEGKGVHLITVNDYLAKRDAEEMGQVYEFLGLTVGLNFSDIdDASEKKAIYEADIIY 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 242 TNNSELGFDYLRDNLTSNREQLVMRwpkPFHFAIVDEVDSVLIDEGRNPLLISGEANENAARYPVAAKVAELLVKDSHYK 321
Cdd:PRK09200 174 TTNSELGFDYLRDNLADSKEDKVQR---PLNYAIIDEIDSILLDEAQTPLIISGKPRVQSNLYHIAAKFVKTLEEDVDYE 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 322 VELKENSVELTEEGISLAEMALETGDLWD-ENDPWARFVMNALKAKEFYKRDVQYIVRDGKALIINELTGRVEDKRRWSE 400
Cdd:PRK09200 251 FDEEKKEVWLTDQGIEKAESYFGIDNLYSlEHQVLYRHIILALRAHVLFKRDVDYIVYDGEIVLVDRFTGRVLPGRKLQD 330
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 401 GVHQAVEAKEGLEIQADSIVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQIPVIEVPTNLSNIRIDLPIQAFATA 480
Cdd:PRK09200 331 GLHQAIEAKEGVEITEENRTMASITIQNLFRMFPKLSGMTGTAKTEEKEFFEVYNMEVVQIPTNRPIIRIDYPDKVFVTL 410
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 481 RGKWEHVRREVEDMFGQGRPVLVGTTSVENSEYLSELLKEWGIPHNVLNArpKYAAREADFIAQAGRKYAITISTNMAGR 560
Cdd:PRK09200 411 DEKYKAVIEEVKERHETGRPVLIGTGSIEQSETFSKLLDEAGIPHNLLNA--KNAAKEAQIIAEAGQKGAVTVATNMAGR 488
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 561 GTDIILGgnpkmlareiiedsilsyltsevladnidddelsqkvlskikvgpsslallaraslmakyvgkseskswtrkk 640
Cdd:PRK09200 489 GTDIKLG------------------------------------------------------------------------- 495
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 641 aksvvtesleksqtmdpmelqnlineqsemyplgpaialaylsvlkdceahclhEGseVKRLGGLHVIGTSLHESRRIDN 720
Cdd:PRK09200 496 ------------------------------------------------------EG--VHELGGLAVIGTERMESRRVDL 519
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 721 QLRGRAGRQGDPGSTRFMISLQDEMFQKFNfdTEWAVRLISKITNDEDL---PIEGDTIVKQLLALQINAEKYFFGIRKS 797
Cdd:PRK09200 520 QLRGRSGRQGDPGSSQFFISLEDDLLKRFA--PEELEKLKKKLKTDAQRltgLLFNRKVHKIVVKAQRISEGAGYSAREY 597
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 798 LVEFDEVLEVQRKHVYDLRQLLLTGE---NESCSQHIFQ-YMQAVVDEIVVGNSNPQkhprYWSLAKLLKEFMAISGNll 873
Cdd:PRK09200 598 ALELDDVINIQRDVVYKERNRLLEEDdrdLIDIVILMIDvYLEAVAEEYLLEKSLLE----EWIYENLSFQLNEILSN-- 671
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 874 desFSGITEETMLQSLENLhegssiemedlslphlpkppnafrgirrknsslrrwldicsdnltgsgSYRTLINLLRKFL 953
Cdd:PRK09200 672 ---TNFPDKKEVVQFLLEE------------------------------------------------AEKQLKEKRNKLP 700
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 954 GDYLIAsylnvvqesgfddgyikEIERAVLLKTLDCYWRDHLVNMNKLSSAVNVRSFAHRNPLEEYKIDGCRFFISMLSA 1033
Cdd:PRK09200 701 SATLYN-----------------QFLRKVALKAIDQNWVEQVDALQQLKEGIGLRQYGQRNPIREYQKEALESFEYMYEN 763
|
970 980
....*....|....*....|....*
gi 334182752 1034 TRRLTVESILQYWSSPMESQELFIS 1058
Cdd:PRK09200 764 IKKDMVRNLLLSLLVFDKEGEIVIH 788
|
|
| secA |
PRK12903 |
preprotein translocase subunit SecA; Reviewed |
84-1058 |
0e+00 |
|
preprotein translocase subunit SecA; Reviewed
Pssm-ID: 237258 [Multi-domain] Cd Length: 925 Bit Score: 734.55 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 84 RDYYRLVESVNSLEPQIQSLSDEQLKAKTAEFRERLARGESLADMQAEAFAVVREAAKRTIGMRHFDVQIIGGGVLHDGS 163
Cdd:PRK12903 15 RIAEKILKQINDLEPYYRNLTDEELANKTNEFKDRLKNGETLEDIRVEAFAVAREATKRVLGKRPYDVQIIGGIILDLGS 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 164 IAEMKTGEGKTLVSTLAAYLNALTGEGVHVVTVNDYLAQRDAEWMGRVHRFLGLSVGLIQRGMKAEERKFNYSCDITYTN 243
Cdd:PRK12903 95 VAEMKTGEGKTITSIAPVYLNALTGKGVIVSTVNEYLAERDAEEMGKVFNFLGLSVGINKANMDPNLKREAYACDITYSV 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 244 NSELGFDYLRDNLTSNREQLVMRwpkPFHFAIVDEVDSVLIDEGRNPLLISGEANENAARYPVAAKVAELLvKDSHYKVE 323
Cdd:PRK12903 175 HSELGFDYLRDNMVSSKEEKVQR---GLNFCLIDEVDSILIDEAKTPLIISGGQSNDSNLYLAADQFVRTL-KEDDYKID 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 324 LKENSVELTEEGISLAEMALETGDLWD-ENDPWARFVMNALKAKEFYKRDVQYIVRDGKALIINELTGRVEDKRRWSEGV 402
Cdd:PRK12903 251 EETKAISLTEKGIKKANKFFKLKNLYDiENSELVHRIQNALRAHKVMKEDVEYIVRDGKIELVDQFTGRIMEGRSYSEGL 330
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 403 HQAVEAKEGLEIQADSIVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQIPVIEVPTNLSNIRIDLPIQAFATARG 482
Cdd:PRK12903 331 QQAIQAKEMVEIEPETKTLATITYQNFFRLFKKLSGMTGTAKTEEQEFIDIYNMRVNVVPTNKPVIRKDEPDSIFGTKHA 410
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 483 KWEHVRREVEDMFGQGRPVLVGTTSVENSEYLSELLKEWGIPHNVLNArpKYAAREADFIAQAGRKYAITISTNMAGRGT 562
Cdd:PRK12903 411 KWKAVVKEVKRVHKKGQPILIGTAQVEDSETLHELLLEANIPHTVLNA--KQNAREAEIIAKAGQKGAITIATNMAGRGT 488
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 563 DIILggnpkmlareiiedsilsyltsevladnidddelsqkvlskikvgpsslallaraslmakyvgkseskswtrkkak 642
Cdd:PRK12903 489 DIKL---------------------------------------------------------------------------- 492
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 643 svvtesleksqtmdpmelqnlineqsemyplgpaialaylsvlkdceahclheGSEVKRLGGLHVIGTSLHESRRIDNQL 722
Cdd:PRK12903 493 -----------------------------------------------------SKEVLELGGLYVLGTDKAESRRIDNQL 519
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 723 RGRAGRQGDPGSTRFMISLQDEMFQKF-NFDtewavRLISKITNDEDLPIEGDTIVKQLLALQINAEKYFFGIRKSLVEF 801
Cdd:PRK12903 520 RGRSGRQGDVGESRFFISLDDQLFRRFsNFD-----KIKEAFKKLGDDEIKSKFFSKALLNAQKKIEGFNFDTRKNVLDY 594
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 802 DEVLEVQRKHVYDLRQLLLTGENEScsqHIFQYMQAVVDEIVVGNSN---PQKHPRYWSLAKLL-KEFMAISGNLLDES- 876
Cdd:PRK12903 595 DDVIRQQRDLIYAQRDLILIADDLS---HVIEKMISRAVEQILKNSFiilKNNTINYKELVEFLnDNLLRITHFKFSEKd 671
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 877 FSGITEETMLQSLENLhegssiemedlslphlpkppnafrgirrknsslrrWLDICSDnltgsgsyrTLINLLRKFLGDY 956
Cdd:PRK12903 672 FENYHKEELAQYLIEA-----------------------------------LNEIYFK---------KRQVILDKIALNT 707
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 957 LIASylnvvqesgfddgyikeiERAVLLKTLDCYWRDHLVNMNKLSSAVNVRSFAHRNPLEEYKIDGCRFFISMLSatrR 1036
Cdd:PRK12903 708 FFES------------------ERYIILSALDKYWQNHIDTMDKLRSGVNLVQYSQKNPYQVYTEEGTKKFNILLQ---E 766
|
970 980
....*....|....*....|..
gi 334182752 1037 LTVESILQYWSSPMESQELFIS 1058
Cdd:PRK12903 767 IAYDVIVSLFNNPNAEKILIIT 788
|
|
| SecA_DEAD |
smart00957 |
SecA DEAD-like domain; SecA protein binds to the plasma membrane where it interacts with ... |
75-451 |
0e+00 |
|
SecA DEAD-like domain; SecA protein binds to the plasma membrane where it interacts with proOmpA to support translocation of proOmpA through the membrane. SecA protein achieves this translocation, in association with SecY protein, in an ATP dependent manner. This domain represents the N-terminal ATP-dependent helicase domain, which is related to the.
Pssm-ID: 214937 [Multi-domain] Cd Length: 380 Bit Score: 661.43 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 75 FTSMNYWVVRDYYRLVESVNSLEPQIQSLSDEQLKAKTAEFRERLARGESLADMQAEAFAVVREAAKRTIGMRHFDVQII 154
Cdd:smart00957 5 FGSKNDRELKRLRKIVDQINALEPEMEALSDEELRAKTAEFKERLAEGESLDDLLPEAFAVVREAAKRVLGMRHFDVQLI 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 155 GGGVLHDGSIAEMKTGEGKTLVSTLAAYLNALTGEGVHVVTVNDYLAQRDAEWMGRVHRFLGLSVGLIQRGMKAEERKFN 234
Cdd:smart00957 85 GGIVLHEGKIAEMKTGEGKTLVATLPAYLNALTGKGVHVVTVNDYLAKRDAEWMGPLYEFLGLTVGVIVSGMSPEERRAA 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 235 YSCDITYTNNSELGFDYLRDNLTSNREQLVMRwpkPFHFAIVDEVDSVLIDEGRNPLLISGEA-NENAARYPVAAKVAEL 313
Cdd:smart00957 165 YAADITYGTNNEFGFDYLRDNMAFSKEDKVQR---GLNYAIVDEVDSILIDEARTPLIISGPAeDESSDLYHRADKFVPR 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 314 LVKDSHYKVELKENSVELTEEGISLAEMALETGDLWD-ENDPWARFVMNALKAKEFYKRDVQYIVRDGKALIINELTGRV 392
Cdd:smart00957 242 LKEDEDYTVDEKSRTVELTEEGIEKAEKLLGIDNLYDpENIELLHHVNQALRAHYLFKRDVDYIVRDGEVVIVDEFTGRV 321
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 334182752 393 EDKRRWSEGVHQAVEAKEGLEIQADSIVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFL 451
Cdd:smart00957 322 MEGRRYSDGLHQAIEAKEGVEIQEENQTLATITFQNYFRMYKKLSGMTGTAKTEAEEFR 380
|
|
| SecA_DEAD |
pfam07517 |
SecA DEAD-like domain; SecA protein binds to the plasma membrane where it interacts with ... |
75-451 |
0e+00 |
|
SecA DEAD-like domain; SecA protein binds to the plasma membrane where it interacts with proOmpA to support translocation of proOmpA through the membrane. SecA protein achieves this translocation, in association with SecY protein, in an ATP dependent manner. This domain represents the N-terminal ATP-dependent helicase domain, which is related to the pfam00270.
Pssm-ID: 462190 [Multi-domain] Cd Length: 379 Bit Score: 629.14 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 75 FTSMNYWVVRDYYRLVESVNSLEPQIQSLSDEQLKAKTAEFRERLARGESLADMQAEAFAVVREAAKRTIGMRHFDVQII 154
Cdd:pfam07517 5 FGSPNERDLKRLRKIVDQINALEEELKALSDEELRAKTDELRERLREGESLDDILPEAFALVREAAKRVLGMRHYDVQLI 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 155 GGGVLHDGSIAEMKTGEGKTLVSTLAAYLNALTGEGVHVVTVNDYLAQRDAEWMGRVHRFLGLSVGLIQRGMKAEERKFN 234
Cdd:pfam07517 85 GGLVLHEGKIAEMKTGEGKTLTATLPAYLNALSGKGVHVVTVNDYLAKRDAEWMGPLYEFLGLTVGVITSDMDPEERRAA 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 235 YSCDITYTNNSELGFDYLRDNLTSNREQLVMRwpkPFHFAIVDEVDSVLIDEGRNPLLISGEANENAARYPVAAKVAELL 314
Cdd:pfam07517 165 YNADITYGTNNELGFDYLRDNMATSKEDKVQR---GLNFAIVDEVDSILIDEARTPLIISGPSEDDSELYREADRLVKSL 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 315 VKDSHYKVELKENSVELTEEGISLAEMALETGDLWD-ENDPWARFVMNALKAKEFYKRDVQYIVRDGKALIINELTGRVE 393
Cdd:pfam07517 242 EEDGDYEIDEKSKNVELTEKGIEKIEKLLGIDNLYDpENVELLHHINQALKAHHLFKRDVDYIVRDGEVVIVDEFTGRVM 321
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 334182752 394 DKRRWSEGVHQAVEAKEGLEIQADSIVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFL 451
Cdd:pfam07517 322 PGRRWSDGLHQAIEAKEGVEITPESQTLASITYQNFFRLYPKLSGMTGTAKTEAEEFR 379
|
|
| secA2 |
TIGR03714 |
accessory Sec system translocase SecA2; Members of this protein family are homologous to SecA ... |
84-1019 |
0e+00 |
|
accessory Sec system translocase SecA2; Members of this protein family are homologous to SecA and part of the accessory Sec system. This system, including both five core proteins for export and a variable number of proteins for glycosylation, operates in certain Gram-positive pathogens for the maturation and delivery of serine-rich glycoproteins such as the cell surface glycoprotein GspB in Streptococcus gordonii. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 163426 [Multi-domain] Cd Length: 762 Bit Score: 608.58 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 84 RDYYRLVESVNSLEPQIQSLSDEQLKAKTAEFRERLARGESLADMQAEAFAVVREAAKRTIGMRHFDVQIIGGGVLHDGS 163
Cdd:TIGR03714 7 KKLRKILNKINALKGKMATLSDEELQAKTAEFKNRLVEGESLDDILPEAYAVVREADKRVLGMFPYDVQVLGAIVLHQGN 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 164 IAEMKTGEGKTLVSTLAAYLNALTGEGVHVVTVNDYLAQRDAEWMGRVHRFLGLSVGL-----IQRGMKAEERKFNYSCD 238
Cdd:TIGR03714 87 IAEMKTGEGKTLTATMPLYLNALTGKGAMLVTTNDYLAKRDAEEMGPVYEWLGLTVSLgvvddPDEEYDANEKRKIYNSD 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 239 ITYTNNSELGFDYLRDNLTSNREQLVMRwpkPFHFAIVDEVDSVLIDEGRNPLLISGEANENAARYPVAAKVAELLVKDS 318
Cdd:TIGR03714 167 IVYTTNSALGFDYLIDNLASNKEGKFLR---PFNYVIVDEVDSVLLDSAQTPLVISGAPRVQSNLYHIADTFVRTLKEDV 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 319 HYKVELKENSVELTEEGISLAEMALETGDLW-DENDPWARFVMNALKAKEFYKRDVQYIVRDGKALIINELTGRVEDKRR 397
Cdd:TIGR03714 244 DYIFKKDKKEVWLTDKGIEKAEQYFKIDNLYsEEYFELVRHINLALRAHYLFKRNKDYVVTNGEVVLLDRITGRLLEGTK 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 398 WSEGVHQAVEAKEGLEIQADSIVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQIPVIEVPTNLSNIRIDLPIQAF 477
Cdd:TIGR03714 324 LQSGIHQAIEAKEHVELSKETRAMASITYQNLFKMFNKLSGMTGTGKVAEKEFIETYSLSVVKIPTNKPIIRIDYPDKIY 403
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 478 ATARGKWEHVRREVEDMFGQGRPVLVGTTSVENSEYLSELLKEWGIPHNVLNArpKYAAREADFIAQAGRKYAITISTNM 557
Cdd:TIGR03714 404 ATLPEKLMATLEDVKEYHETGQPVLLITGSVEMSEIYSELLLREGIPHNLLNA--QNAAKEAQIIAEAGQKGAVTVATSM 481
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 558 AGRGTDIILggnpkmlareiiedsilsyltsevladnidddelsqkvlskikvgpsslallaraslmakyvgkseskswt 637
Cdd:TIGR03714 482 AGRGTDIKL----------------------------------------------------------------------- 490
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 638 rkkaksvvtesleksqtmdpmelqnlineqsemyplgpaialaylsvlkdceahclheGSEVKRLGGLHVIGTSLHESRR 717
Cdd:TIGR03714 491 ----------------------------------------------------------GKGVAELGGLAVIGTERMENSR 512
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 718 IDNQLRGRAGRQGDPGSTRFMISLQDEMFQKFNfdTEWAVRLISKITNDE----DLPIEGDTIVKQLLALQINAEKYFFG 793
Cdd:TIGR03714 513 VDLQLRGRSGRQGDPGSSQFFVSLEDDLIKRWS--PSWLKKYYKKYSVKDsklkPSALFKRRFRKIVEKAQRASEDKGES 590
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 794 IRKSLVEFDEVLEVQRKHVYDLRQLLLTGE---NESCSQHIFQYMQAVVDEIVVGNSNpqkhprywslakLLKEFMaisg 870
Cdd:TIGR03714 591 AREQTNEFEESLSIQRENIYAERNRLIEGSdflDDDVDQIIDDVFNMYAEEQDLSNKS------------LLKRFI---- 654
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 871 nlldesfsgiteetmlqsLENLhegssiemeDLSLPHLPKPpnafrgirrknsslrrwLDICSDnltgsgsyRTLINLLR 950
Cdd:TIGR03714 655 ------------------LENL---------SYQFKNDPDE-----------------FDLKNK--------EAIKDFLK 682
|
890 900 910 920 930 940
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 334182752 951 KfLGDYLIASYLNVVQesgfDDGYIKEIERAVLLKTLDCYWRDHLVNMNKLSSAVNVRSFAHRNPLEEY 1019
Cdd:TIGR03714 683 E-IADKELSEKKKVLN----NDYLFNDFERLSILKAIDENWIEQVDYLQQLKTVVTNRQNGQRNPIFEY 746
|
|
| secA |
PRK12898 |
preprotein translocase subunit SecA; Reviewed |
61-806 |
0e+00 |
|
preprotein translocase subunit SecA; Reviewed
Pssm-ID: 237253 [Multi-domain] Cd Length: 656 Bit Score: 604.31 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 61 LTGNLGRLKRNVQDftsmnyWVVRDYYRLVESVNSLEPQIQSLSDEQLKAKTAEFRERL-ARGESLADMQAEAFAVVREA 139
Cdd:PRK12898 22 LERVLGRLAGRVRG------RAARRQRLLADRVLAAAEALAGLSEEALRARSLALRARLrARDGFRDALLAEAFALVREA 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 140 AKRTIGMRHFDVQIIGGGVLHDGSIAEMKTGEGKTLVSTLAAYLNALTGEGVHVVTVNDYLAQRDAEWMGRVHRFLGLSV 219
Cdd:PRK12898 96 SGRVLGQRHFDVQLMGGLALLSGRLAEMQTGEGKTLTATLPAGTAALAGLPVHVITVNDYLAERDAELMRPLYEALGLTV 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 220 GLIQRGMKAEERKFNYSCDITYTNNSELGFDYLRDNLTSNR-------------------EQLVMRwpkPFHFAIVDEVD 280
Cdd:PRK12898 176 GCVVEDQSPDERRAAYGADITYCTNKELVFDYLRDRLALGQrasdarlaleslhgrssrsTQLLLR---GLHFAIVDEAD 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 281 SVLIDEGRNPLLISGEANE--NAARYPVAAKVAELLVKDSHYKVELKENSVELTEEGIS-LAEMALETGDLWdeNDPWAR 357
Cdd:PRK12898 253 SVLIDEARTPLIISAPAKEadEAEVYRQALELAAQLKEGEDYTIDAAEKRIELTEAGRArIAELAESLPPAW--RGAVRR 330
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 358 F--VMNALKAKEFYKRDVQYIVRDGKALIINELTGRVEDKRRWSEGVHQAVEAKEGLEIQADSIVVAQITYQSLFKLYPK 435
Cdd:PRK12898 331 EelVRQALSALHLFRRDEHYIVRDGKVVIVDEFTGRVMPDRSWEDGLHQMIEAKEGCELTDPRETLARITYQRFFRRYLR 410
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 436 LSGMTGTAKTEEKEFLKMFQIPVIEVPTNLSNIRIDLPIQAFATARGKWEHVRREVEDMFGQGRPVLVGTTSVENSEYLS 515
Cdd:PRK12898 411 LAGMTGTAREVAGELWSVYGLPVVRIPTNRPSQRRHLPDEVFLTAAAKWAAVAARVRELHAQGRPVLVGTRSVAASERLS 490
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 516 ELLKEWGIPHNVLNARpkYAAREADFIAQAGRKYAITISTNMAGRGTDIILggnpkmlareiiedsilsyltsevladni 595
Cdd:PRK12898 491 ALLREAGLPHQVLNAK--QDAEEAAIVARAGQRGRITVATNMAGRGTDIKL----------------------------- 539
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 596 dddelsqkvlskikvgpsslallaraslmakyvgkseskswtrkkaksvvtesleksqtmdpmelqnlineqsemyplgp 675
Cdd:PRK12898 --------------------------------------------------------------------------------
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 676 aialaylsvlkdceahclheGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMISLQDEMFQKFnfdteW 755
Cdd:PRK12898 540 --------------------EPGVAARGGLHVILTERHDSARIDRQLAGRCGRQGDPGSYEAILSLEDDLLQSF-----L 594
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|..
gi 334182752 756 AVRLISKITNDEDLPIEGDTIVKQLLAL-QINAEKYFFGIRKSLVEFDEVLE 806
Cdd:PRK12898 595 GSRGLAIRRMELLGPRGGRALGALLLRRaQRRAERLHARARRALLHADEQLD 646
|
|
| secA |
PRK12901 |
preprotein translocase subunit SecA; Reviewed |
89-1043 |
0e+00 |
|
preprotein translocase subunit SecA; Reviewed
Pssm-ID: 237256 [Multi-domain] Cd Length: 1112 Bit Score: 577.74 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 89 LVESVNSLEPQIQSLSDEQLKAKTAEFRERLArgESLADMQA-------------------------------------- 130
Cdd:PRK12901 23 IVEKIKAEYPELEALSNDELRAKTDEFKQYIK--EAVADIDAkieelkaeaiesldiderediyaqidklekeayeilek 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 131 -------EAFAVVREAAKR---------------------------------------------TIGMRHFDVQIIGGGV 158
Cdd:PRK12901 101 vldeilpEAFAIVKETARRfaeneeievtatdfdrelaatkdfvtiegdkaiwknhwdaggneiTWDMVHYDVQLIGGVV 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 159 LHDGSIAEMKTGEGKTLVSTLAAYLNALTGEGVHVVTVNDYLAQRDAEWMGRVHRFLGLSVGLIQRGM-KAEERKFNYSC 237
Cdd:PRK12901 181 LHQGKIAEMATGEGKTLVATLPVYLNALTGNGVHVVTVNDYLAKRDSEWMGPLYEFHGLSVDCIDKHQpNSEARRKAYNA 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 238 DITYTNNSELGFDYLRDNLTSNREQLVMRwpkPFHFAIVDEVDSVLIDEGRNPLLISG--------EANE---------- 299
Cdd:PRK12901 261 DITYGTNNEFGFDYLRDNMAHSPEDLVQR---KHNYAIVDEVDSVLIDDARTPLIISGpvpkgddqEFEElkprverlve 337
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 300 ----------NAARYPVAAK------------------------------VAELLVK-DSHY-----------------K 321
Cdd:PRK12901 338 aqrklatqflAEAKKLIAEGdkkegglallrayrglpknkalikflseegIKALLQKtENFYmqdnnrempevdeelyfV 417
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 322 VELKENSVELTEEGIS-------------LAEMALETGDLWDENDP------------WARFVMNA---------LKAKE 367
Cdd:PRK12901 418 IDEKNNSVELTDKGIDyitgndedpdffvLPDIGTELAEIENEGGLdeeeeaekkeelFQDYSVKServhtlnqlLKAYT 497
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 368 FYKRDVQYIVRDGKALIINELTGRVEDKRRWSEGVHQAVEAKEGLEIQADSIVVAQITYQSLFKLYPKLSGMTGTAKTEE 447
Cdd:PRK12901 498 LFEKDDEYVVMDGKVKIVDEQTGRIMEGRRYSDGLHQAIEAKENVKIEAATQTFATITLQNYFRMYHKLAGMTGTAETEA 577
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 448 KEFLKMFQIPVIEVPTNLSNIRIDLPIQAFATARGKWEHVRREVEDMFGQGRPVLVGTTSVENSEYLSELLKEWGIPHNV 527
Cdd:PRK12901 578 GEFWDIYKLDVVVIPTNRPIARKDKEDLVYKTKREKYNAVIEEITELSEAGRPVLVGTTSVEISELLSRMLKMRKIPHNV 657
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 528 LNArpKYAAREADFIAQAGRKYAITISTNMAGRGTDiilggnpkmlareiiedsilsyltsevladnidddelsqkvlsk 607
Cdd:PRK12901 658 LNA--KLHQKEAEIVAEAGQPGTVTIATNMAGRGTD-------------------------------------------- 691
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 608 IKVGPsslallaraslmakyvgkseskswtrkkaksvvtesleksqtmdpmelqnlineqsemyplgpaialaylsvlkd 687
Cdd:PRK12901 692 IKLSP--------------------------------------------------------------------------- 696
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 688 ceahclhegsEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMISLQDEMFQKFNfdTEWAVRLISKITNDE 767
Cdd:PRK12901 697 ----------EVKAAGGLAIIGTERHESRRVDRQLRGRAGRQGDPGSSQFYVSLEDNLMRLFG--SERIAKVMDRMGLKE 764
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 768 DLPIEGDTIVKQLLALQINAEKYFFGIRKSLVEFDEVLEVQRKHVYDLRQLLLTGENES--CSQHIFQYMQAVVDEIVVG 845
Cdd:PRK12901 765 GEVIQHSMISKSIERAQKKVEENNFGIRKRLLEYDDVMNSQREVIYKRRRHALMGERLGmdIANMIYDVCEAIVENNKVA 844
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 846 NSnpqkhprYWSLA-KLLKEFmAISGNLLDESF-----SGITEETMLQSLENLHEgssiEMEDLSLPHLPKPPNAF--RG 917
Cdd:PRK12901 845 ND-------YKGFKfELIRTL-AMESPITEEEFnklkkDELTDKLYDAALENYQR----KMERIAEIAFPVIKQVYeeQG 912
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 918 IRRKNsslrrwldICSDNLTGSGSYRTLINlLRKFLgdyliasylnvvqESGFDDgYIKEIERAVLLKTLDCYWRDHLVN 997
Cdd:PRK12901 913 NMYER--------IVVPFTDGKRTLNVVTN-LKEAY-------------ETEGKE-IVKDFEKNITLHIIDEAWKEHLRE 969
|
1130 1140 1150 1160
....*....|....*....|....*....|....*....|....*.
gi 334182752 998 MNKLSSAVNVRSFAHRNPLEEYKIDGCRFFISMLSATRRLTVeSIL 1043
Cdd:PRK12901 970 MDELKQSVQNASYEQKDPLLIYKFESFELFKNMVDKVNREVI-SFL 1014
|
|
| SecA2_Mycobac |
TIGR04221 |
accessory Sec system translocase SecA2, Actinobacterial type; Members of this family are the ... |
89-821 |
1.77e-150 |
|
accessory Sec system translocase SecA2, Actinobacterial type; Members of this family are the SecA2 subunit of the Mycobacterial type of accessory secretory system. This family is quite different SecA2 of the Staph/Strep type (TIGR03714).
Pssm-ID: 275062 [Multi-domain] Cd Length: 762 Bit Score: 467.00 E-value: 1.77e-150
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 89 LVESVNSLEPQIQSLSDEQLkakTAEFRERLARGEslADMQAEAFAVVREAAKRTIGMRHFDVQIIGGGVLHDGSIAEMK 168
Cdd:TIGR04221 23 IVPAAASRMKELSALDDEEL---TKAARDLVLSGE--AADAAQFLAILREAAERTLGMRPFDVQLLGALRLLAGDVIEMA 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 169 TGEGKTLVSTLAAYLNALTGEGVHVVTVNDYLAQRDAEWMGRVHRFLGLSVGLIQRGMKAEERKFNYSCDITYTNNSELG 248
Cdd:TIGR04221 98 TGEGKTLAGAMAATGFALLGKRVHVVTVNDYLARRDAEWMGPLVDFFGLTVGWVTEDSTPDERRAAYACDVTYASVNEIG 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 249 FDYLRDNLTSNREQLVMRWPKpfhFAIVDEVDSVLIDEGRNPLLISGEANENAARYPVAAKVAElLVKDSHYKVELKENS 328
Cdd:TIGR04221 178 FDVLRDQLVTDRADLVQPAAD---VALIDEADSVLVDEALVPLVLAGNEPGEAPRGRITDLVRR-LREDKHYTVDEDGRN 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 329 VELTEEGISLAEMALETGDLWDENDPWARFV-MN-ALKAKEFYKRDVQYIVRDGKALIINELTGRVEDKRRWSEGVHQAV 406
Cdd:TIGR04221 254 VHLTEDGARAVEAELGIDDLYSEEHVGTTLVqVNvALHAHALLIRDVHYIVRDGKVALIDASRGRVAQLQRWPDGLQAAV 333
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 407 EAKEGLEIQADSIVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQIPVIEVPTNLSNIRIDLPIQAFATARGKWEH 486
Cdd:TIGR04221 334 EAKEGLEVTEGGEVLDTITVQALIGRYPTVCGMTGTAVAAGEQLRQFYDLGVSVIPPNTPNIRFDEADRVYATAAEKNDA 413
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 487 VRREVEDMFGQGRPVLVGTTSVENSEYLSELLKEWGIPHNVLNArpKYAAREADFIAQAGRKYAITISTNMAGRGTDIIL 566
Cdd:TIGR04221 414 IVEEIAEVHKTGQPVLVGTQDVAESEELAEALLEAGVPCNVLNA--KNDAEEAAIIAEAGDIGAVTVSTQMAGRGTDIRL 491
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 567 GGnpkmlareiiedsilsyltsevlADNIDDDelsqkvlskikvgpsslallaraslmakyvgkseskswtrkkaksvvt 646
Cdd:TIGR04221 492 GG-----------------------SDEADHD------------------------------------------------ 500
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 647 esleksqtmdpmelqnlineqsemyplgpaialaylsvlkdceahclhegsEVKRLGGLHVIGTSLHESRRIDNQLRGRA 726
Cdd:TIGR04221 501 ---------------------------------------------------RVAELGGLHVIGTGRHRTARLDNQLRGRA 529
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 727 GRQGDPGSTRFMISLQDEMFQKFNFDTEWAVRliskitNDEDLPIEGDTIVKQLLALQINAEKYFFGIRKSLVEFDEVLE 806
Cdd:TIGR04221 530 GRQGDPGSSVFFVSLEDDVVAVGGAGETVPAQ------PAEDGRIESPRVQDFVDHAQRVAEGQLLEIHANTWRYNQLIA 603
|
730
....*....|....*
gi 334182752 807 VQRKHVYDLRQLLLT 821
Cdd:TIGR04221 604 QQRDIIDERRETLLD 618
|
|
| DEXDc_SecA |
cd17928 |
DEXD-box helicase domain of SecA; SecA is a part of the Sec translocase that transports the ... |
107-463 |
2.06e-125 |
|
DEXD-box helicase domain of SecA; SecA is a part of the Sec translocase that transports the vast majority of bacterial and ER-exported proteins. SecA binds both the signal sequence and the mature domain of the preprotein emerging from the ribosome. SecA belongs to the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
Pssm-ID: 350686 [Multi-domain] Cd Length: 230 Bit Score: 381.50 E-value: 2.06e-125
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 107 QLKAKTAEFRERLARGESLADMQAEAFAVVREAAKRTIGMRHFDVQIIGGGVLHDGSIAEMKTGEGKTLVSTLAAYLNAL 186
Cdd:cd17928 1 ELRAKTDELRERLAKGETLDDLLPEAFALVREAARRVLGMRPFDVQLIGGLVLHEGKIAEMKTGEGKTLTATLPAYLNAL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 187 TGEGVHVVTVNDYLAQRDAEWMGRVHRFLGLSVGLIQRGMKAEERKFNYSCDITYTNNSELGFDYLRDNLTSNREQLVMR 266
Cdd:cd17928 81 TGKGVHVVTVNDYLARRDAEWMGPLYEFLGLTVGVILSDMSPDERREAYAADITYGTNNELGFDYLRDNMVTSKEDLVQR 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 267 wpkPFHFAIVDEVDSVLIDEGRNPLLISGeanenaarypvaakvaellvkdshykvelkensvelteegislaemaletg 346
Cdd:cd17928 161 ---GLNFAIVDEVDSILIDEARTPLIISG--------------------------------------------------- 186
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 347 dlwdendpwarfvmnalkakefykrdvqyivrdgkaliineltgrvedkrrwsegvhqaveakegleiqadsiVVAQITY 426
Cdd:cd17928 187 -------------------------------------------------------------------------TLATITF 193
|
330 340 350
....*....|....*....|....*....|....*..
gi 334182752 427 QSLFKLYPKLSGMTGTAKTEEKEFLKMFQIPVIEVPT 463
Cdd:cd17928 194 QNYFRLYPKLAGMTGTAKTEAEEFREIYNLDVVVIPT 230
|
|
| SF2_C_secA |
cd18803 |
C-terminal helicase domain of the protein translocase subunit secA; SecA is a component of the ... |
469-740 |
1.07e-60 |
|
C-terminal helicase domain of the protein translocase subunit secA; SecA is a component of the Sec translocase that transports the vast majority of bacterial and ER-exported proteins. SecA binds both the signal sequence and the mature domain of the preprotein emerging from the ribosome. SecA is a DEAD-like helicase belonging to superfamily (SF)2, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. Similar to SF1 helicases, SF2 helicases do not form toroidal structures like SF3-6 helicases. Their helicase core consists of two similar protein domains that resemble the fold of the recombination protein RecA. This model describes the C-terminal domain, also called HelicC.
Pssm-ID: 350190 [Multi-domain] Cd Length: 141 Bit Score: 203.55 E-value: 1.07e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 469 RIDLPIQAFATARGKWEHVRREVEDMFGQGRPVLVGTTSVENSEYLSELLKEWGIPHNVLNArpKYAAREADFIAQAGRK 548
Cdd:cd18803 1 RKDLPDLVYKTEEEKWKAIVEEVKELHAKGQPVLVGTRSVEKSELLSALLKEEGIPHNVLNA--KNHAREAEIIAEAGQK 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 549 YAITISTNMAGRGTDIILGGNpkmlareiiedsilsyltsevladnidddelsqkvlskikvgpsslallaraslmakyv 628
Cdd:cd18803 79 GAVTIATNMAGRGTDIKLGGN----------------------------------------------------------- 99
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 629 gkseskswtrkkaksvvtesleksqtmdpmelqnlineqsemyplgpaialaylsvlkdceahclhegseVKRLGGLHVI 708
Cdd:cd18803 100 ----------------------------------------------------------------------VEELGGLHVI 109
|
250 260 270
....*....|....*....|....*....|..
gi 334182752 709 GTSLHESRRIDNQLRGRAGRQGDPGSTRFMIS 740
Cdd:cd18803 110 GTERHESRRIDNQLRGRAGRQGDPGSSRFYLS 141
|
|
| SecA_SW |
pfam07516 |
SecA Wing and Scaffold domain; SecA protein binds to the plasma membrane where it interacts ... |
770-1046 |
1.44e-46 |
|
SecA Wing and Scaffold domain; SecA protein binds to the plasma membrane where it interacts with proOmpA to support translocation of proOmpA through the membrane. SecA protein achieves this translocation, in association with SecY protein, in an ATP dependent manner. This family is composed of two C-terminal alpha helical subdomains: the wing and scaffold subdomains.
Pssm-ID: 462189 [Multi-domain] Cd Length: 213 Bit Score: 166.13 E-value: 1.44e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 770 PIEGDTIVKQLLALQINAEKYFFGIRKSLVEFDEVLEVQRKHVYDLRQLLLTGENesCSQHIFQYMQAVVDEIVVGNSNP 849
Cdd:pfam07516 1 PIEHKMVSKAIENAQKKVEGRNFDIRKNLLEYDDVMNQQREVIYAQRREILEGED--LKEDILEMIEDVVDDIVDEYIPP 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 850 QKHPRYWSLAKLLKEFMAISGnlLDESFSGITEETmlqslenlhegssiemedlslphlpkppnafrgirrknsslrrwl 929
Cdd:pfam07516 79 EESPEEWDLEGLKEALNEIFG--LELPISEWEEEE--------------------------------------------- 111
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 930 dicsdnltgsgsyrtliNLLRKFLGDYLIASYLNVVQ--ESGFDDGYIKEIERAVLLKTLDCYWRDHLVNMNKLSSAVNV 1007
Cdd:pfam07516 112 -----------------DLDKEELKERLLEAAEEAYEekEEEIGPELMRELERVVLLQVIDSKWKEHLDAMDQLRQGIGL 174
|
250 260 270
....*....|....*....|....*....|....*....
gi 334182752 1008 RSFAHRNPLEEYKIDGCRFFISMLSATRRLTVESILQYW 1046
Cdd:pfam07516 175 RAYGQKDPLVEYKREGFELFEEMLDAIREEVVRYLFRVQ 213
|
|
| SecA_PP_bind |
pfam01043 |
SecA preprotein cross-linking domain; The SecA ATPase is involved in the insertion and ... |
299-407 |
4.07e-42 |
|
SecA preprotein cross-linking domain; The SecA ATPase is involved in the insertion and retraction of preproteins through the plasma membrane. This domain has been found to cross-link to preproteins, thought to indicate a role in preprotein binding. The pre-protein cross-linking domain is comprised of two sub domains that are inserted within the ATPase domain.
Pssm-ID: 460039 [Multi-domain] Cd Length: 110 Bit Score: 149.49 E-value: 4.07e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 299 ENAARYPVAAKVAELLVKDSHYKVELKENSVELTEEGISLAEMALETGDLWD-ENDPWARFVMNALKAKEFYKRDVQYIV 377
Cdd:pfam01043 1 KSTELYRQADKFVKQLKEDEDYEVDEKAKTVELTEEGIEKAEKLLGIDNLYDpENIELVHHINQALKAHHLFKRDVDYIV 80
|
90 100 110
....*....|....*....|....*....|
gi 334182752 378 RDGKALIINELTGRVEDKRRWSEGVHQAVE 407
Cdd:pfam01043 81 KDGEVVIVDEFTGRLMPGRRYSDGLHQAIE 110
|
|
| SecA_PP_bind |
smart00958 |
SecA preprotein cross-linking domain; The SecA ATPase is involved in the insertion and ... |
297-407 |
2.57e-41 |
|
SecA preprotein cross-linking domain; The SecA ATPase is involved in the insertion and retraction of preproteins through the plasma membrane. This domain has been found to cross-link to preproteins, thought to indicate a role in preprotein binding. The pre-protein cross-linking domain is comprised of two sub domains that are inserted within the ATPase domain.
Pssm-ID: 214938 [Multi-domain] Cd Length: 114 Bit Score: 147.21 E-value: 2.57e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 297 ANENAARYPVAAKVAELLVKD-SHYKVELKENSVELTEEGISLAEMALETGDLWD-ENDPWARFVMNALKAKEFYKRDVQ 374
Cdd:smart00958 2 AEDSSELYKRADELVPTLKKDeEDYEVDEKSRQVALTEEGIEKAEKLLGIDNLYDpENIELVHHVNQALRAHKLFKRDVD 81
|
90 100 110
....*....|....*....|....*....|...
gi 334182752 375 YIVRDGKALIINELTGRVEDKRRWSEGVHQAVE 407
Cdd:smart00958 82 YIVRDGEVVIVDEFTGRVMPGRRWSDGLHQAIE 114
|
|
| SF2-N |
cd00046 |
N-terminal DEAD/H-box helicase domain of superfamily 2 helicases; The DEAD/H-like superfamily ... |
164-306 |
5.51e-19 |
|
N-terminal DEAD/H-box helicase domain of superfamily 2 helicases; The DEAD/H-like superfamily 2 helicases comprise a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This N-terminal domain contains the ATP-binding region.
Pssm-ID: 350668 [Multi-domain] Cd Length: 146 Bit Score: 84.76 E-value: 5.51e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334182752 164 IAEMKTGEGKTLVSTLAAYLNALT-GEGVHVVTVNDYLAQRDAEWMGRVhRFLGLSVGLIQRGMKAEER--KFNYSCDIT 240
Cdd:cd00046 5 LITAPTGSGKTLAALLAALLLLLKkGKKVLVLVPTKALALQTAERLREL-FGPGIRVAVLVGGSSAEERekNKLGDADII 83
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 334182752 241 YTNNSELGFDYLRDNLtsnreqlvmRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEANENAARYPV 306
Cdd:cd00046 84 IATPDMLLNLLLREDR---------LFLKDLKLIIVDEAHALLIDSRGALILDLAVRKAGLKNAQV 140
|
|
| DEAD-like_helicase_N |
cd17912 |
N-terminal helicase domain of the DEAD-box helicase superfamily; The DEAD-like helicase ... |
162-226 |
1.90e-08 |
|
N-terminal helicase domain of the DEAD-box helicase superfamily; The DEAD-like helicase superfamily is a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. The N-terminal domain contains the ATP-binding region.
Pssm-ID: 350670 [Multi-domain] Cd Length: 81 Bit Score: 52.52 E-value: 1.90e-08
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 334182752 162 GSIAEMKTGEGKTLVSTLAAYLNALTGEGVHVVTVNDYLAQRDAEWMGRVHRFLGlsvglIQRGM 226
Cdd:cd17912 1 NILHLGPTGSGKTLVAIQKIASAMSSGKSVLVVTPTKLLAHEILIVIDEIQ*ILD-----PAAGW 60
|
|
| DEAD-like_helicase_C |
cd09300 |
C-terminal helicase domain of the DEAD-like helicases; This hierarchy of DEAD-like helicases ... |
702-737 |
8.90e-06 |
|
C-terminal helicase domain of the DEAD-like helicases; This hierarchy of DEAD-like helicases is composed of two superfamilies, SF1 and SF2, that share almost identical folds and extensive structural similarity in their catalytic core. Helicases are involved in ATP-dependent RNA or DNA unwinding. Two distinct types of helicases exist, those forming toroidal, predominantly hexameric structures, and those that do not. SF1 and SF2 helicases do not form toroidal structures, while SF3-6 helicases do. Their conserved helicase core consists of two similar protein domains that resemble the fold of the recombination protein RecA. This model describes the C-terminal domain, also called HelicC.
Pssm-ID: 350171 [Multi-domain] Cd Length: 59 Bit Score: 44.08 E-value: 8.90e-06
10 20 30
....*....|....*....|....*....|....*.
gi 334182752 702 LGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRF 737
Cdd:cd09300 22 PELNTIIVDKNLRSYRGLNQAFGRANRIYTFGGIVT 57
|
|
| HepA |
COG0553 |
Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination, ... |
474-539 |
7.37e-04 |
|
Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination, and repair];
Pssm-ID: 440319 [Multi-domain] Cd Length: 682 Bit Score: 43.68 E-value: 7.37e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 334182752 474 IQAFATARGKWEHVRREVEDMFGQGRPVLVGTTSVENSEYLSELLKEWGIPHNVLNARPKYAAREA 539
Cdd:COG0553 525 GAELSGRSAKLEALLELLEELLAEGEKVLVFSQFTDTLDLLEERLEERGIEYAYLHGGTSAEERDE 590
|
|
| L-arabinose_isomerase |
cd03557 |
L-Arabinose isomerase (AI) catalyzes the isomerization of L-arabinose to L-ribulose, the first ... |
77-149 |
6.65e-03 |
|
L-Arabinose isomerase (AI) catalyzes the isomerization of L-arabinose to L-ribulose, the first reaction in its conversion into D-xylulose-5-phosphate, an intermediate in the pentose phosphate pathway, which allows L-arabinose to be used as a carbon source. AI can also convert D-galactose to D-tagatose at elevated temperatures in the presence of divalent metal ions. D-tagatose, rarely found in nature, is of commercial interest as a low-calorie sugar substitute.
Pssm-ID: 239619 Cd Length: 484 Bit Score: 40.35 E-value: 6.65e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 334182752 77 SMNYWVVRDyyrLVESVNSLepqiqslSDEQLKAKTAEFRERLARGESLADmQAEAFAVVREAAKRTIGMRHF 149
Cdd:cd03557 199 SVNGYGVGD---LVARVDAV-------SDSDVDALVDEYEALYDLAPELKD-GGERRASLREAARIELGLRRF 260
|
|
| |
