NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|302564612|ref|NP_001180809|]
View 

olfactory receptor 10Q1 [Macaca mulatta]

Protein Classification

olfactory receptor( domain architecture ID 11607024)

olfactory receptor plays a central role in olfaction or the sense of smell, similar to human family 10, subfamily A olfactory receptors; belongs to the class A rhodopsin-like family of G protein-coupled receptors; binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf)

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
7tmA_OR10A-like cd15225
olfactory receptor subfamily 10A and related proteins, member of the class A family of ...
41-306 7.27e-159

olfactory receptor subfamily 10A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10A, 10C, 10H, 10J, 10V, 10R, 10J, 10W, among others, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


:

Pssm-ID: 320353  Cd Length: 277  Bit Score: 444.59  E-value: 7.27e-159
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  41 MILCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLA 120
Cdd:cd15225   13 VTLLGNLLIILITKVDPALHTPMYFFLRNLSFLEICYTSVIVPKMLVNLLSEDKTISFLGCATQMFFFLFLGGTECFLLA 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 121 IMAYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGHRqEINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15225   93 AMAYDRYVAICNPLRYTLIMNRRVCLQLVAGSWLSGILVSLGQTTLIFSLPFCGSN-EINHFFCDIPPVLKLACADTSLN 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 201 QAVLYVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIA 280
Cdd:cd15225  172 EIAIFVASVLVILVPFLLILVSYIFIISTILKIPSAEGRRKAFSTCSSHLIVVTLFYGCASFTYLRPKSSYSPETDKLLS 251
                        250       260
                 ....*....|....*....|....*.
gi 302564612 281 LVYTFVTPLLNPLIYTLRNKDVKDAL 306
Cdd:cd15225  252 LFYTVVTPMLNPIIYSLRNKEVKGAL 277
 
Name Accession Description Interval E-value
7tmA_OR10A-like cd15225
olfactory receptor subfamily 10A and related proteins, member of the class A family of ...
41-306 7.27e-159

olfactory receptor subfamily 10A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10A, 10C, 10H, 10J, 10V, 10R, 10J, 10W, among others, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320353  Cd Length: 277  Bit Score: 444.59  E-value: 7.27e-159
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  41 MILCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLA 120
Cdd:cd15225   13 VTLLGNLLIILITKVDPALHTPMYFFLRNLSFLEICYTSVIVPKMLVNLLSEDKTISFLGCATQMFFFLFLGGTECFLLA 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 121 IMAYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGHRqEINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15225   93 AMAYDRYVAICNPLRYTLIMNRRVCLQLVAGSWLSGILVSLGQTTLIFSLPFCGSN-EINHFFCDIPPVLKLACADTSLN 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 201 QAVLYVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIA 280
Cdd:cd15225  172 EIAIFVASVLVILVPFLLILVSYIFIISTILKIPSAEGRRKAFSTCSSHLIVVTLFYGCASFTYLRPKSSYSPETDKLLS 251
                        250       260
                 ....*....|....*....|....*.
gi 302564612 281 LVYTFVTPLLNPLIYTLRNKDVKDAL 306
Cdd:cd15225  252 LFYTVVTPMLNPIIYSLRNKEVKGAL 277
7tm_4 pfam13853
Olfactory receptor; The members of this family are transmembrane olfactory receptors.
41-310 4.72e-41

Olfactory receptor; The members of this family are transmembrane olfactory receptors.


Pssm-ID: 404695  Cd Length: 278  Bit Score: 144.18  E-value: 4.72e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612   41 MILCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLA 120
Cdd:pfam13853   7 IIFLGNGTILFVIKTESSLHQPMYLFLAMLALIDLGLSASTLPTVLGIFWFGLREISFEACLTQMFFIHKFSIMESAVLL 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  121 IMAYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGHrQEINHFLCDVPPVLRLACADIHVH 200
Cdd:pfam13853  87 AMAVDRFVAICSPLRYTTILTNPVISRIGLGVSVRSFILVLPLPFLLRRLPFCGH-HVLSHSYCLHMGLARLSCADIKVN 165
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  201 QAVLYVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQI- 279
Cdd:pfam13853 166 NIYGLFVVTSTFGIDSLLIVLSYGLILRTVLGIASREGRLKALNTCGSHVCAVLAFYTPMIGLSMVHRFGHNVPPLLQIm 245
                         250       260       270
                  ....*....|....*....|....*....|..
gi 302564612  280 -ALVYTFVTPLLNPLIYTLRNKDVKDALRNAI 310
Cdd:pfam13853 246 mANAYLFFPPVLNPIVYSVKTKQIRDCVKRML 277
PHA03087 PHA03087
G protein-coupled chemokine receptor-like protein; Provisional
43-143 5.12e-03

G protein-coupled chemokine receptor-like protein; Provisional


Pssm-ID: 222976 [Multi-domain]  Cd Length: 335  Bit Score: 38.22  E-value: 5.12e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  43 LCGNTAIIwVVCTRSTLRTPMYFFLSNLSFLEICYTtAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLAIM 122
Cdd:PHA03087  55 LVGNIIVI-YVLTKTKIKTPMDIYLLNLAVSDLLFV-MTLPFQIYYYILFQWSFGEFACKIVSGLYYIGFYNSMNFITVM 132
                         90       100
                 ....*....|....*....|.
gi 302564612 123 AYDRYVAICHPLHYTLIMTRK 143
Cdd:PHA03087 133 SVDRYIAIVHPVKSNKINTVK 153
 
Name Accession Description Interval E-value
7tmA_OR10A-like cd15225
olfactory receptor subfamily 10A and related proteins, member of the class A family of ...
41-306 7.27e-159

olfactory receptor subfamily 10A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10A, 10C, 10H, 10J, 10V, 10R, 10J, 10W, among others, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320353  Cd Length: 277  Bit Score: 444.59  E-value: 7.27e-159
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  41 MILCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLA 120
Cdd:cd15225   13 VTLLGNLLIILITKVDPALHTPMYFFLRNLSFLEICYTSVIVPKMLVNLLSEDKTISFLGCATQMFFFLFLGGTECFLLA 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 121 IMAYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGHRqEINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15225   93 AMAYDRYVAICNPLRYTLIMNRRVCLQLVAGSWLSGILVSLGQTTLIFSLPFCGSN-EINHFFCDIPPVLKLACADTSLN 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 201 QAVLYVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIA 280
Cdd:cd15225  172 EIAIFVASVLVILVPFLLILVSYIFIISTILKIPSAEGRRKAFSTCSSHLIVVTLFYGCASFTYLRPKSSYSPETDKLLS 251
                        250       260
                 ....*....|....*....|....*.
gi 302564612 281 LVYTFVTPLLNPLIYTLRNKDVKDAL 306
Cdd:cd15225  252 LFYTVVTPMLNPIIYSLRNKEVKGAL 277
7tmA_OR cd13954
olfactory receptors, member of the class A family of seven-transmembrane G protein-coupled ...
41-299 5.18e-129

olfactory receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320092 [Multi-domain]  Cd Length: 270  Bit Score: 368.73  E-value: 5.18e-129
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  41 MILCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLA 120
Cdd:cd13954   13 LTLLGNLLIILLVRLDSRLHTPMYFFLSNLSFLDICYTSVTVPKMLANLLSGDKTISFSGCLTQLYFFFSLGGTECFLLA 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 121 IMAYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGHRqEINHFLCDVPPVLRLACADIHVH 200
Cdd:cd13954   93 VMAYDRYVAICHPLHYPTIMNKRVCILLAAGSWLIGFLNSLIHTVLISQLPFCGSN-VINHFFCDIPPLLKLSCSDTSLN 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 201 QAVLYVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIA 280
Cdd:cd13954  172 ELVIFILAGFVGLGSFLLTLVSYIYIISTILKIPSAEGRQKAFSTCASHLTVVSLFYGTIIFMYVRPSSSYSSDLDKVVS 251
                        250
                 ....*....|....*....
gi 302564612 281 LVYTFVTPLLNPLIYTLRN 299
Cdd:cd13954  252 VFYTVVTPMLNPIIYSLRN 270
7tmA_OR5V1-like cd15231
olfactory receptor subfamily 5V1 and related proteins, member of the class A family of ...
41-306 3.89e-117

olfactory receptor subfamily 5V1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5V1 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320359 [Multi-domain]  Cd Length: 277  Bit Score: 338.86  E-value: 3.89e-117
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  41 MILCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLA 120
Cdd:cd15231   13 VTLLGNLLIITLVLLDSHLHTPMYFFLSNLSFLDICYTSVTVPKMLVNLLRERKTISYIGCLAQLFFFVSFVGTECLLLA 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 121 IMAYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGHRQeINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15231   93 VMAYDRYVAICNPLHYAVIMSRKVCLQLAAASWLCGFLNSAVHTVLTFRLSFCGSNQ-ISHFFCDIPPLLKLSCSDTSLN 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 201 QAVLYVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIA 280
Cdd:cd15231  172 EVLLLVASVFIGLTPFLFIVISYVYIISTILKIRSAEGRRKAFSTCASHLTVVTLFYGTAIFNYNRPSSGYSLDKDTLIS 251
                        250       260
                 ....*....|....*....|....*.
gi 302564612 281 LVYTFVTPLLNPLIYTLRNKDVKDAL 306
Cdd:cd15231  252 VLYSIVTPMLNPIIYSLRNKEVKGAL 277
7tmA_OR5-like cd15230
olfactory receptor family 5 and related proteins, member of the class A family of ...
41-299 3.77e-116

olfactory receptor family 5 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 5, some subfamilies from families 8 and 9, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320358  Cd Length: 270  Bit Score: 336.02  E-value: 3.77e-116
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  41 MILCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLA 120
Cdd:cd15230   13 ITLVGNLGMIVLIRIDSRLHTPMYFFLSNLSFVDICYSSVITPKMLVNFLSEKKTISFAGCAAQFFFFAVFGTTECFLLA 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 121 IMAYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGHRQeINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15230   93 AMAYDRYVAICNPLLYTVIMSKRVCIQLVAGSYLCGFVNSIVHTSSTFSLSFCGSNV-INHFFCDIPPLLKLSCSDTHIN 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 201 QAVLYVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIA 280
Cdd:cd15230  172 ELVLFAFSGFIGLSTLLIILISYLYILITILRIRSAEGRRKAFSTCASHLTAVSLFYGTLIFMYLRPSSSYSLDQDKVVS 251
                        250
                 ....*....|....*....
gi 302564612 281 LVYTFVTPLLNPLIYTLRN 299
Cdd:cd15230  252 VFYTVVIPMLNPLIYSLRN 270
7tmA_OR2-like cd15237
olfactory receptor family 2 and related proteins, member of the class A family of ...
41-299 6.18e-116

olfactory receptor family 2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor families 2 and 13, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320365 [Multi-domain]  Cd Length: 270  Bit Score: 335.40  E-value: 6.18e-116
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  41 MILCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLA 120
Cdd:cd15237   13 LTLLGNGLIILLIWLDSRLHTPMYFFLSNLSLLDICYTTSTVPQMLVHLLSEHKTISFVGCAAQMFFFLALGVTECVLLA 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 121 IMAYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGHRqEINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15237   93 VMAYDRYVAICNPLRYSVIMSRRVCVRLAATSWASGFLNSLVLTSLTLRLPFCGPN-HINHFFCEAPAVLKLACADTSLN 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 201 QAVLYVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIA 280
Cdd:cd15237  172 EAVIFVTSVLVLLIPFSLILASYIRILATILRIQSAEGRKKAFSTCASHLTVVTLFYGTAIFMYMRPHSTHSPDQDKMIS 251
                        250
                 ....*....|....*....
gi 302564612 281 LVYTFVTPLLNPLIYTLRN 299
Cdd:cd15237  252 VFYTIVTPMLNPLIYSLRN 270
7tmA_OR2T-like cd15421
olfactory receptor subfamily 2T and related proteins, member of the class A family of ...
41-306 1.89e-115

olfactory receptor subfamily 2T and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamilies 2T, 2M, 2L, 2V, 2Z, 2AE, 2AG, 2AK, 2AJ, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320543  Cd Length: 277  Bit Score: 334.52  E-value: 1.89e-115
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  41 MILCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLA 120
Cdd:cd15421   13 VALTGNALLILLIWLDSRLHTPMYFLLSQLSLMDLMLISTTVPKMATNFLSGRKSISFVGCGTQIFFFLTLGGAECLLLA 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 121 IMAYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGHRqEINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15421   93 LMAYDRYVAICHPLRYPVLMSPRVCLLMAAGSWLGGSLNSLIHTVYTMHFPYCGSR-EIHHFFCEVPALLKLSCADTSAY 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 201 QAVLYVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIA 280
Cdd:cd15421  172 ETVVYVSGVLFLLIPFSLILASYALILLTVLRMRSAEGRKKALATCSSHLTVVSLYYGPAIFTYMRPGSYHSPEQDKVVS 251
                        250       260
                 ....*....|....*....|....*.
gi 302564612 281 LVYTFVTPLLNPLIYTLRNKDVKDAL 306
Cdd:cd15421  252 VFYTILTPMLNPLIYSLRNKEVLGAL 277
7tmA_OR1A-like cd15235
olfactory receptor subfamily 1A and related proteins, member of the class A family of ...
43-306 2.14e-113

olfactory receptor subfamily 1A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 1A, 1B, 1K, 1L, 1Q and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320363 [Multi-domain]  Cd Length: 278  Bit Score: 329.18  E-value: 2.14e-113
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  43 LCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLAIM 122
Cdd:cd15235   16 LLGNLLIVLLIRSDPRLHTPMYFFLSHLSLVDICFTSTTVPKMLANLLSGSKTISYAGCLAQMYFFIAFGNTDSFLLAVM 95
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 123 AYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGHRqEINHFLCDVPPVLRLACADIHVHQA 202
Cdd:cd15235   96 AYDRYVAICHPLHYATVMSPKRCLLLVAGSWLLSHLHSLLHTLLMSRLSFCGSN-EIPHFFCDLQPLLKLSCSDTSLNEL 174
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 203 VLYVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIALV 282
Cdd:cd15235  175 LIFTEGAVVVLGPFLLIVLSYARILAAVLKVPSAAGRRKAFSTCGSHLTVVALFYGTIIGVYFQPSSSYSADKDRVATVM 254
                        250       260
                 ....*....|....*....|....
gi 302564612 283 YTFVTPLLNPLIYTLRNKDVKDAL 306
Cdd:cd15235  255 YTVVTPMLNPFIYSLRNKDVKGAL 278
7tmA_OR8S1-like cd15229
olfactory receptor subfamily 8S1 and related proteins, member of the class A family of ...
41-306 1.31e-109

olfactory receptor subfamily 8S1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 8S1 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320357 [Multi-domain]  Cd Length: 277  Bit Score: 319.54  E-value: 1.31e-109
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  41 MILCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLA 120
Cdd:cd15229   13 LTLLGNLLIMLVIRADSHLHTPMYFFLSHLSFLDICYSSVTVPKMLENLLSERKTISVEGCIAQIFFFFFFAGTEAFLLS 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 121 IMAYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGHrQEINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15229   93 AMAYDRYAAICHPLHYVQIMSKQVCVQLVGGAWALGFLYALINTLLLLNLHFCGP-NEINHFSCELPSLLPLSCSDTFAN 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 201 QAVLYVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIA 280
Cdd:cd15229  172 KMVLLTSSVIFGLGSFLLTLVSYIHIISTILRIRSAEGRSKAFSTCSSHLTVVGLFYGTGFFRYLRPNSASSSVLDRVFS 251
                        250       260
                 ....*....|....*....|....*.
gi 302564612 281 LVYTFVTPLLNPLIYTLRNKDVKDAL 306
Cdd:cd15229  252 IQYSILTPMLNPIIYSLKNKEVKAAL 277
7tmA_OR6C-like cd15912
olfactory receptor subfamily 6C and related proteins, member of the class A family of ...
41-299 1.52e-109

olfactory receptor subfamily 6C and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 6C, 6X, 6J, 6T, 6V, 6M, 9A, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320578  Cd Length: 270  Bit Score: 319.43  E-value: 1.52e-109
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  41 MILCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLA 120
Cdd:cd15912   13 LTLLGNLLIITITLVDHRLHTPMYFFLRNFSFLEILFTSVVIPKMLANLLSGKKTISFAGCFAQSFFYFFLGTTEFFLLA 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 121 IMAYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGHRQeINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15912   93 VMSFDRYVAICNPLHYPTIMNSRVCLQLVLGSWVGGFLLILPPTILVFQLPFCGPNV-INHFFCDSGPLLKLSCSDTRLI 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 201 QAVLYVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIA 280
Cdd:cd15912  172 ELLDFILASVVLLGSLLLTIVSYIYIISTILRIPSASGRQKAFSTCASHLTVVSIFYGSCIFMYVRPSQSSSLDLNKVVA 251
                        250
                 ....*....|....*....
gi 302564612 281 LVYTFVTPLLNPLIYTLRN 299
Cdd:cd15912  252 LLNTVVTPLLNPFIYTLRN 270
7tmA_OR5A1-like cd15417
olfactory receptor subfamily 5A1 and related proteins, member of the class A family of ...
41-307 1.85e-109

olfactory receptor subfamily 5A1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5A1, 5A2, 5AN1, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320539  Cd Length: 279  Bit Score: 319.59  E-value: 1.85e-109
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  41 MILCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLA 120
Cdd:cd15417   13 VTLLWNLGLIILIRMDSHLHTPMYFFLSNLSFVDICYSSSITPKMLSDFFREQKTISFVGCATQYFVFSGMGLTECFLLA 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 121 IMAYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGHRQeINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15417   93 AMAYDRYVAICNPLLYSVIMSPRLCVQLVAGAYLGGFLNSLIQTVSMFQLSFCGPNV-IDHFFCDIPPLLSLSCSDTFIS 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 201 QAVLYVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIA 280
Cdd:cd15417  172 QVVLFLVAVLFGVFSVLVVLISYGYIISTILKIRSAKGRSKAFNTCASHLTAVTLFYGTGLFVYLRPSSSHSQDQDKVAS 251
                        250       260
                 ....*....|....*....|....*..
gi 302564612 281 LVYTFVTPLLNPLIYTLRNKDVKDALR 307
Cdd:cd15417  252 VFYTVVIPMLNPLIYSLRNKEIKDALK 278
7tmA_OR13H-like cd15431
olfactory receptor subfamily 13H and related proteins, member of the class A family of ...
43-299 2.06e-109

olfactory receptor subfamily 13H and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 13H and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320548 [Multi-domain]  Cd Length: 269  Bit Score: 318.78  E-value: 2.06e-109
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  43 LCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLAIM 122
Cdd:cd15431   15 LLGNGLIILLIRVDSQLHTPMYFFLSNLSFLDICYTTSSVPQMLVNCLSDRPTISYSRCLAQMYISLFLGITECLLLAVM 94
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 123 AYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLqLTALIFTLPFCGHrQEINHFLCDVPPVLRLACADIHVHQA 202
Cdd:cd15431   95 AYDRFVAICNPLRYTLIMSWRVCIQLAAGSWVSAFLLTV-IPVLTMPLHFCGP-NVINHFFCEVQALLKLACSDTSLNEI 172
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 203 VLYVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIALV 282
Cdd:cd15431  173 LMFATSIFTLLLPFSFILVSYIRIGVAVLRIRSAEGRRKAFSTCGSHLTVVTIFYGTAIFMYLRPQSKSSSDQDKIISVF 252
                        250
                 ....*....|....*..
gi 302564612 283 YTFVTPLLNPLIYTLRN 299
Cdd:cd15431  253 YGVVTPMLNPLIYSLRN 269
7tmA_OR2B-like cd15947
olfactory receptor subfamily 2B and related proteins, member of the class A family of ...
41-299 3.37e-109

olfactory receptor subfamily 2B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 2 (subfamilies 2B, 2C, 2G, 2H, 2I, 2J, 2W, 2Y) and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320613 [Multi-domain]  Cd Length: 270  Bit Score: 318.41  E-value: 3.37e-109
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  41 MILCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLA 120
Cdd:cd15947   13 LTLLGNTAIILLSLLDPRLHTPMYFFLSNLSFLDLCFTTSIVPQMLVNLWGPDKTISYGGCVTQLYIFLWLGSTECVLLA 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 121 IMAYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGHRQeINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15947   93 VMAFDRYVAVCRPLHYTVIMHPRLCVQLAALSWLSGLANSLLQTTLTLQLPLCGHHT-LDHFFCEVPALIKLACVDTTFN 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 201 QAVLYVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIA 280
Cdd:cd15947  172 ELELFVASVFFLLVPLSLILVSYGFIARAVLRIKSAEGRRKAFGTCSSHLLVVSLFYGTAIYMYLQPPSSYSQDQGKFIS 251
                        250
                 ....*....|....*....
gi 302564612 281 LVYTFVTPLLNPLIYTLRN 299
Cdd:cd15947  252 LFYTVVTPTLNPLIYTLRN 270
7tmA_OR1_7-like cd15918
olfactory receptor families 1, 7, and related proteins, member of the class A family of ...
45-299 4.86e-109

olfactory receptor families 1, 7, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor families 1 and 7, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320584 [Multi-domain]  Cd Length: 270  Bit Score: 318.02  E-value: 4.86e-109
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  45 GNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLAIMAY 124
Cdd:cd15918   17 GNLLIILAIGSDSHLHTPMYFFLANLSLVDICFTSTTVPKMLVNIQTQSKSISYAGCLTQMYFFLLFGDLDNFLLAVMAY 96
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 125 DRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGHRqEINHFLCDVPPVLRLACADIHVHQAVL 204
Cdd:cd15918   97 DRYVAICHPLHYTTIMSPRLCILLVAASWVITNLHSLLHTLLMARLSFCASN-EIPHFFCDLNPLLKLSCSDTHLNELVI 175
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 205 YVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIALVYT 284
Cdd:cd15918  176 LVLGGLVGLVPFLCILVSYVRIVSAVLRIPSAGGKWKAFSTCGSHLSVVSLFYGTVIGVYLSPPSSHSASKDSVAAVMYT 255
                        250
                 ....*....|....*
gi 302564612 285 FVTPLLNPLIYTLRN 299
Cdd:cd15918  256 VVTPMLNPFIYSLRN 270
7tmA_OR5AP2-like cd15943
olfactory receptor subfamily 5AP2 and related proteins, member of the class A family of ...
15-310 1.19e-108

olfactory receptor subfamily 5AP2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5AP2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320609 [Multi-domain]  Cd Length: 295  Bit Score: 318.15  E-value: 1.19e-108
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  15 EFVFRVFTTATEFQVLLFLLFLLLYLMILCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQK 94
Cdd:cd15943    1 EFILLGLTDNPELQVILFAVFLVIYLITLVGNLGMIVLIRLDSRLHTPMYFFLSHLSFLDLCYSSAITPKMLVNFLAENK 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  95 TISLAGCGAQMFFFVTLGSTDCFLLAIMAYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCG 174
Cdd:cd15943   81 TISFTGCAAQMYFFVAFATTECFLLAVMAYDRYVAICNPLLYTVIMSPRVCIQLVAGSYLIGFVNALIQTICTFRLPFCG 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 175 HRQeINHFLCDVPPVLRLACADIHVHQAVLYVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVL 254
Cdd:cd15943  161 SNV-INHFFCDVPPLLKLSCSDTHVNEIVLFAFAIFLGIFTSLEILVSYVYILSAILRIHSSEGRRKAFSTCASHLMAVT 239
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 302564612 255 LQYGCCSLVYLRPRSSTSEDEDRQIALVYTFVTPLLNPLIYTLRNKDVKDALRNAI 310
Cdd:cd15943  240 IFYGTTLFMYLRPSSSYSLDQDKVVSVFYTVVIPMLNPLIYSLRNKEVKDALRRIL 295
7tmA_OR8H-like cd15411
olfactory receptor subfamily 8H and related proteins, member of the class A family of ...
43-308 1.41e-107

olfactory receptor subfamily 8H and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8H, 8I, 5F and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320533 [Multi-domain]  Cd Length: 279  Bit Score: 314.64  E-value: 1.41e-107
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  43 LCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLAIM 122
Cdd:cd15411   15 VMGNLGMILLIRADSQLHTPMYFFLSNLSFVDFCYSSTITPKALENFLSGRKAISFAGCFVQMYFFIALATTECFLLGLM 94
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 123 AYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGHRQeINHFLCDVPPVLRLACADIHVHQA 202
Cdd:cd15411   95 AYDRYVAICNPLLYTVVMSRRVCLKLAAGSYAAGFLNSLIHTTLISRLSFCGSNV-INHFFCDTPPLLKLSCSDTHVNEM 173
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 203 VLYVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIALV 282
Cdd:cd15411  174 LIFILAGLTLVGSLLIILVSYTYILSTILKIRSAEGRRKAFSTCASHLTAVTIFYGTGIFTYLRPSSSYSLGQDKVASVF 253
                        250       260
                 ....*....|....*....|....*.
gi 302564612 283 YTFVTPLLNPLIYTLRNKDVKDALRN 308
Cdd:cd15411  254 YTVVIPMLNPLIYSLRNKEVKNALRR 279
7tmA_OR2W-like cd15434
olfactory receptor subfamily 2W and related proteins, member of the class A family of ...
41-306 4.32e-106

olfactory receptor subfamily 2W and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2W and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320551 [Multi-domain]  Cd Length: 277  Bit Score: 310.85  E-value: 4.32e-106
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  41 MILCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLA 120
Cdd:cd15434   13 LTLVGNTTIILVSCLDSRLHTPMYFFLANLSFLDLCFTTSIIPQMLVNLWGPDKTISYVGCAIQLFIALGLGGTECVLLA 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 121 IMAYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGHRqEINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15434   93 VMAYDRYAAVCQPLHYTVVMHPRLCWKLVAMSWLIGFGNSLVLSPLTLSLPRCGHH-RVDHFFCEMPALIKLACVDTTAY 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 201 QAVLYVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIA 280
Cdd:cd15434  172 EATIFALGVFILLFPLSLILVSYGYIARAVLKIKSAAGRKKAFGTCGSHLTVVSLFYGTIIYMYLQPKNSVSQDQGKFLT 251
                        250       260
                 ....*....|....*....|....*.
gi 302564612 281 LVYTFVTPLLNPLIYTLRNKDVKDAL 306
Cdd:cd15434  252 LFYTIVTPSLNPLIYTLRNKDVKGAL 277
7tmA_OR2A-like cd15420
olfactory receptor subfamily 2A and related proteins, member of the class A family of ...
42-306 8.35e-106

olfactory receptor subfamily 2A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2A and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320542 [Multi-domain]  Cd Length: 277  Bit Score: 310.03  E-value: 8.35e-106
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  42 ILCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLAI 121
Cdd:cd15420   14 TLLGNGLILGLIWLDSRLHTPMYFFLSHLAVVDICYASSTVPHMLGNLLKQRKTISFAGCGTQMYLFLALAHTECVLLAV 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 122 MAYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGhRQEINHFLCDVPPVLRLACADIHVHQ 201
Cdd:cd15420   94 MSYDRYVAICHPLRYTVIMNWRVCTTLAATSWACGFLLALVHVVLLLRLPFCG-PNEVNHFFCEILAVLKLACADTWINE 172
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 202 AVLYVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIAL 281
Cdd:cd15420  173 ILIFAGCVFILLGPFSLILISYLHILAAILKIQSAEGRRKAFSTCSSHLCVVGLFYGTAMFMYMVPGSSNSAEQEKILSL 252
                        250       260
                 ....*....|....*....|....*
gi 302564612 282 VYTFVTPLLNPLIYTLRNKDVKDAL 306
Cdd:cd15420  253 FYSLFNPMLNPLIYSLRNKQVKGAL 277
7tmA_OR5AK3-like cd15408
olfactory receptor subfamily 5AK3, 5AU1, and related proteins, member of the class A family of ...
16-303 3.10e-105

olfactory receptor subfamily 5AK3, 5AU1, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5AK3, 5AU1, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320530  Cd Length: 287  Bit Score: 308.87  E-value: 3.10e-105
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  16 FVFRVFTTATEFQVLLFLLFLLLYLMILCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKT 95
Cdd:cd15408    1 FILLGFTDQPELQVLLFVVFLLIYVITLVGNLGMILLIRLDSRLHTPMYFFLSHLSFLDICYSSTITPKTLLNLLAERKV 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  96 ISLAGCGAQMFFFVTLGSTDCFLLAIMAYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGH 175
Cdd:cd15408   81 ISFTGCLTQLYFYAVFATTECYLLAAMAYDRYVAICNPLLYTVIMSQRVCVSLVAGSYLAGFLNSTVHTGFILRLSFCGS 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 176 RQeINHFLCDVPPVLRLACADIHVHQAVLYVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLL 255
Cdd:cd15408  161 NV-INHFFCDGPPLLALSCSDTSLNEMLLFAFVGFNVLTTTLVILISYTYILATILRMRSAEGRHKAFSTCASHLTAVTL 239
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*...
gi 302564612 256 QYGCCSLVYLRPRSSTSEDEDRQIALVYTFVTPLLNPLIYTLRNKDVK 303
Cdd:cd15408  240 FYGSLAFMYLRPSSRYSLDLDKVASVFYTVVIPMLNPLIYSLRNKEVK 287
7tmA_OR5D-like cd15410
olfactory receptor subfamily 5D and related proteins, member of the class A family of ...
16-310 8.51e-105

olfactory receptor subfamily 5D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5D, 5L, 5W, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320532  Cd Length: 294  Bit Score: 308.05  E-value: 8.51e-105
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  16 FVFRVFTTATEFQVLLFLLFLLLYLMILCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKT 95
Cdd:cd15410    1 FILLGFTDYPELQVPLFLVFLAIYGITLLGNLGMIVLIKIDPKLHTPMYFFLSHLSFVDFCYSSVIAPKMLVNFLAEDKA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  96 ISLAGCGAQMFFFVTLGSTDCFLLAIMAYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGh 175
Cdd:cd15410   81 ISYSGCMLQFFFFCTFVVTESFLLAVMAYDRYVAICNPLLYTVIMSRKLCVLLVAGSYLWGIVCSLIHTCGLLRLSFCG- 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 176 RQEINHFLCDVPPVLRLACADIHVHQAVLYVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLL 255
Cdd:cd15410  160 SNVINHFFCDLPPLLSLSCSDTYLNELLLFIFGSLNEASTLLIILTSYVFIIVTILRIRSAEGRQKAFSTCASHLTAITI 239
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 302564612 256 QYGCCSLVYLRPRSSTSEDEDRQIALVYTFVTPLLNPLIYTLRNKDVKDALRNAI 310
Cdd:cd15410  240 FHGTILFMYCRPSSSYSLDTDKVASVFYTVVIPMLNPLIYSLRNKDVKDALRKLI 294
7tmA_OR11A-like cd15911
olfactory receptor subfamily 11A and related proteins, member of the class A family of ...
41-299 1.14e-104

olfactory receptor subfamily 11A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 11A and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320577  Cd Length: 270  Bit Score: 306.72  E-value: 1.14e-104
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  41 MILCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLA 120
Cdd:cd15911   13 VTMAGNILIIVLVVADRHLHTPMYFFLGNLSCLEICYTSTILPRMLASLLTGDRTISVSGCIVQFYFFGSLAATECYLLA 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 121 IMAYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGhRQEINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15911   93 VMSYDRYLAICKPLHYASLMNGRLCLQLAAGSWISGFLASTITVILMSQLTFCG-PNEIDHFFCDFAPLLKLSCSDTSLV 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 201 QAVLYVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIA 280
Cdd:cd15911  172 ELVTFILSSIVTLPPFLLTLTSYICIISTILRIPSTTGRQKAFSTCSSHLIVVTIFYGTLIIVYVVPSTNTSRDLNKVFS 251
                        250
                 ....*....|....*....
gi 302564612 281 LVYTFVTPLLNPLIYTLRN 299
Cdd:cd15911  252 LFYTVLTPLVNPLIYSLRN 270
7tmA_OR2F-like cd15429
olfactory receptor subfamily 2F and related proteins, member of the class A family of ...
41-306 3.42e-104

olfactory receptor subfamily 2F and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2F and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320546 [Multi-domain]  Cd Length: 277  Bit Score: 305.86  E-value: 3.42e-104
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  41 MILCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLA 120
Cdd:cd15429   13 LTLLGNFLIILLIRLDPRLHTPMYFFLSHLSFLDICYTTSVVPQMLAHFLAEHKTISFASCVAQLFISLALGGTEFILLA 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 121 IMAYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGHRQeINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15429   93 VMAYDRYVAVCHPLRYTVIMSGGLCIQLAAASWTSGFLNSLVQTAFTFRLPFCGHNT-INHFSCELLAVVRLACVDTSLN 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 201 QAVLYVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIA 280
Cdd:cd15429  172 EVAILVSSVVVLLTPCFLVLLSYIHIISAILRIRSSEGRHKAFSTCASHLTVVSLCYGTAIFTYMRPRSGSSALQEKMIS 251
                        250       260
                 ....*....|....*....|....*.
gi 302564612 281 LVYTFVTPLLNPLIYTLRNKDVKDAL 306
Cdd:cd15429  252 LFYAVVTPMLNPLIYSLRNKEVKGAL 277
7tmA_OR9K2-like cd15419
olfactory receptor subfamily 9K2 and related proteins, member of the class A family of ...
41-307 1.35e-102

olfactory receptor subfamily 9K2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes transmembrane olfactory receptor subfamily 9K2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320541  Cd Length: 279  Bit Score: 301.92  E-value: 1.35e-102
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  41 MILCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLA 120
Cdd:cd15419   13 VTVLGNIGMIIIISTDSRLHTPMYFFLMNLSFLDLCYSSVIAPKALANFLSESKTISYNGCAAQFFFFSLFGTTEGFLLA 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 121 IMAYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGHRqEINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15419   93 AMAYDRFIAICNPLLYPVIMSRRVCVQLVAGSYLCGCINSIIQTSFTFSLSFCGSN-EIDHFFCDVPPLLKLSCSDTFIN 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 201 QAVLYVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIA 280
Cdd:cd15419  172 ELVMFVLCGLIIVSTILVILVSYAYILSTILRIPSAEGRKKAFSTCASHLTAVSLFYGTVFFMYAQPGAVSSPEQSKVVS 251
                        250       260
                 ....*....|....*....|....*..
gi 302564612 281 LVYTFVTPLLNPLIYTLRNKDVKDALR 307
Cdd:cd15419  252 VFYTLVIPMLNPLIYSLRNKDVKEALK 278
7tmA_OR13-like cd15430
olfactory receptor family 13 and related proteins, member of the class A family of ...
41-299 1.07e-100

olfactory receptor family 13 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 13 (subfamilies 13C, 13D, 13F, and 13J), some subfamilies from OR family 2 (2K and 2S), and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320547 [Multi-domain]  Cd Length: 270  Bit Score: 296.97  E-value: 1.07e-100
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  41 MILCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLA 120
Cdd:cd15430   13 VILLGNGVLIIITILDSHLHTPMYFFLGNLSFLDICYTSSSVPLMLVNFLSERKTISFSGCAVQMYLSLAMGSTECVLLA 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 121 IMAYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGHrQEINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15430   93 VMAYDRYVAICNPLRYPIIMNKRLCVQMAAGSWVTGFLNSLVETVLAMQLPFCGN-NVINHFTCEILAVLKLACVDISLN 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 201 QAVLYVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIA 280
Cdd:cd15430  172 EIIMLVGNIIFLVIPLLLICISYIFILSTILRINSAEGRKKAFSTCSAHLTVVIIFYGTILFMYMKPKSKNAQISDKLIT 251
                        250
                 ....*....|....*....
gi 302564612 281 LVYTFVTPLLNPLIYTLRN 299
Cdd:cd15430  252 LFYGVVTPMLNPIIYSLRN 270
7tmA_OR14-like cd15227
olfactory receptor family 14 and related proteins, member of the class A family of ...
41-299 1.74e-99

olfactory receptor family 14 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 14 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320355  Cd Length: 270  Bit Score: 293.59  E-value: 1.74e-99
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  41 MILCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLA 120
Cdd:cd15227   13 AALTGNLLIITVVTLDHHLHTPMYFFLKNLSFLDLCYISVTVPKSIANSLTNTRSISFLGCVAQVFLFIFFAASELALLT 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 121 IMAYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGHRqEINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15227   93 VMAYDRYVAICHPLHYEVIMNRGACVQMAAASWLSGLLYGALHTANTFSLPFCGSN-VIHQFFCDIPQLLKLSCSDTYLN 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 201 QAVLYVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIA 280
Cdd:cd15227  172 EIGVLVLSVCLGLGCFVFIIVSYVHIFSTVLRIPSAQGRSKAFSTCLPHLIVVSLFLSTGSFAYLKPPSDSPSLLDLLLS 251
                        250
                 ....*....|....*....
gi 302564612 281 LVYTFVTPLLNPLIYTLRN 299
Cdd:cd15227  252 VFYSVVPPTLNPIIYSLRN 270
7tmA_OR5G-like cd15414
olfactory receptor subfamily 5G and related proteins, member of the class A family of ...
41-313 1.08e-97

olfactory receptor subfamily 5G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5G and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320536 [Multi-domain]  Cd Length: 285  Bit Score: 289.71  E-value: 1.08e-97
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  41 MILCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLA 120
Cdd:cd15414   13 ITLLGNLGMIILIQVDSRLHTPMYFFLSHLSFVDLCYSSVVTPKMLSDFFVEKKAISFLGCAAQMWFFGLFVAAECFLLA 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 121 IMAYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGHRQeINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15414   93 SMAYDRYVAICNPLLYTVIMSQRVCVQLVVGPYVVGLLNTTTHTTAAFFLPFCGPNV-INHFFCDIPPLLSLSCADTQIN 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 201 QAVLYVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIA 280
Cdd:cd15414  172 KWVLFIMAGALGVLSGLIILVSYIYILIAILRIRSAEGRRKAFSTCSSHLTAVSILYGTLFFIYVRPSSSSSLDLDKVVS 251
                        250       260       270
                 ....*....|....*....|....*....|...
gi 302564612 281 LVYTFVTPLLNPLIYTLRNKDVKDALRNAIIHK 313
Cdd:cd15414  252 VFYTAVIPMLNPLIYSLRNKEVKDALRRTIRRK 284
7tmA_OR2B2-like cd15432
olfactory receptor subfamily 2B2 and related proteins, member of the class A family of ...
41-306 1.31e-97

olfactory receptor subfamily 2B2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes transmembrane olfactory receptor subfamily 2B2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320549 [Multi-domain]  Cd Length: 277  Bit Score: 289.38  E-value: 1.31e-97
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  41 MILCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLA 120
Cdd:cd15432   13 LTLLGNLAIILVSRLDPQLHTPMYFFLSNLSLLDLCYTTSTVPQMLVNLRSPQKTISYGGCVAQLFIFLGLGSTECVLLA 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 121 IMAYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGHRQeINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15432   93 VMAFDRFAAICQPLHYSVIMHQRLCQQLAAGAWISGFANSLVQSTLTLKMPRCGRRR-VDHFFCEVPALLKLSCVDTTAN 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 201 QAVLYVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIA 280
Cdd:cd15432  172 EAELFVISVLLLLIPLGLILISYIFIVRAVLRIRSAEGRRKAFNTCGSHLLVVSLFYGTAISMYLQPPSNSSHDRGKMVA 251
                        250       260
                 ....*....|....*....|....*.
gi 302564612 281 LVYTFVTPLLNPLIYTLRNKDVKDAL 306
Cdd:cd15432  252 LFYGIITPMLNPLIYTLRNKDVKEAL 277
7tmA_OR5M-like cd15412
olfactory receptor subfamily 5M and related proteins, member of the class A family of ...
43-308 1.55e-96

olfactory receptor subfamily 5M and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5M and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320534  Cd Length: 279  Bit Score: 286.60  E-value: 1.55e-96
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  43 LCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLAIM 122
Cdd:cd15412   15 LLGNLGMILLIRLDSRLHTPMYFFLSHLSFVDLCYSSNVTPKMLVNFLSEKKTISFAGCFTQCYFFIALVITEYYMLAVM 94
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 123 AYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGhRQEINHFLCDVPPVLRLACADIHVHQA 202
Cdd:cd15412   95 AYDRYMAICNPLLYSVKMSRRVCISLVTFPYIYGFLNGLIQTILTFRLSFCG-SNVINHFYCADPPLIKLSCSDTYVKET 173
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 203 VLYVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIALV 282
Cdd:cd15412  174 AMFIVAGFNLSSSLLIILISYLFILIAILRIRSAEGRCKAFSTCGSHLTAVTIFYGTLFCMYLRPPSEESVEQSKIVAVF 253
                        250       260
                 ....*....|....*....|....*.
gi 302564612 283 YTFVTPLLNPLIYTLRNKDVKDALRN 308
Cdd:cd15412  254 YTFVSPMLNPLIYSLRNKDVKQALKK 279
7tmA_OR5C1-like cd15945
olfactory receptor subfamily 5C1 and related proteins, member of the class A family of ...
16-307 2.30e-96

olfactory receptor subfamily 5C1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5C1 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320611  Cd Length: 292  Bit Score: 286.64  E-value: 2.30e-96
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  16 FVFRVFTTATEFQVLLFLLFLLLYLMILCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKT 95
Cdd:cd15945    1 FILLGFTDYLSLKVTLFLVFLLVYLLTLVGNVGMIILIRMDSQLHTPMYYFLSNLSFLDLCYSTAIGPKMLVDLLAKRKS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  96 ISLAGCGAQMFFFVTLGSTDCFLLAIMAYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGH 175
Cdd:cd15945   81 IPFYGCALQMFFFAAFADAECLLLAVMAYDRYVAICNPLLYTTAMSRRVCYLLLVGAYLSGMATSLVHTTLTFRLSFCGS 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 176 RqEINHFLCDVPPVLRLACADIHVHQAVLYVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLL 255
Cdd:cd15945  161 N-TINHFFCDIPPLLALSCSDTQINELLLFALCGFIQTSTFLAIIISYCYIIITVLKIRSAEGRFKAFSTCASHLTAVGL 239
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 302564612 256 QYGCCSLVYLRPRSSTSEDEDRQIALVYTFVTPLLNPLIYTLRNKDVKDALR 307
Cdd:cd15945  240 FYGTLLFMYLRPSSSYSLDTDKMTSVFYTLVIPMLNPLIYSLRNKDVKEALK 291
7tmA_OR5H-like cd15409
olfactory receptor subfamily 5H and related proteins, member of the class A family of ...
43-307 2.41e-96

olfactory receptor subfamily 5H and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5H, 5K, 5AC, 5T and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320531 [Multi-domain]  Cd Length: 279  Bit Score: 286.23  E-value: 2.41e-96
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  43 LCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLAIM 122
Cdd:cd15409   15 LVGNLGLIALIWKDSHLHTPMYFFLGNLAFADACTSSSVTPKMLVNFLSKNKMISFSGCAAQFFFFGFSATTECFLLAAM 94
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 123 AYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGhRQEINHFLCDVPPVLRLACADIHVHQA 202
Cdd:cd15409   95 AYDRYVAICNPLLYPVVMSNRLCVQLITASYIGGFLHSMIHVGLTFRLSFCG-SNEINHFFCDIPPLLKISCTDPSINEL 173
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 203 VLYVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIALV 282
Cdd:cd15409  174 VLFIFSGSIQVFTILTVLISYSYILFTILKMKSAEGRRKAFSTCGSHLLSVSLFYGSLFFMYVRPSSLYALDQDMMDSLF 253
                        250       260
                 ....*....|....*....|....*
gi 302564612 283 YTFVTPLLNPLIYTLRNKDVKDALR 307
Cdd:cd15409  254 YTIVIPLLNPFIYSLRNKEVIDALR 278
7tmA_OR2_unk cd15424
olfactory receptor family 2, unknown subfamily, member of the class A family of ...
43-306 4.19e-96

olfactory receptor family 2, unknown subfamily, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents an unknown subfamily, conserved in some mammalia and sauropsids, in family 2 of olfactory receptors. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320544 [Multi-domain]  Cd Length: 277  Bit Score: 285.48  E-value: 4.19e-96
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  43 LCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLAIM 122
Cdd:cd15424   15 ILGNLVIIILVQTDSRLHTPMYFFLSHLAGLEICYVTSTLPQMLAHLLAGNGAISFARCTTQMYIALSLGSTECLLLGAM 94
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 123 AYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGHRQeINHFLCDVPPVLRLACADIHVHQA 202
Cdd:cd15424   95 AYDRYLAICHPLLYAAAMGRWRQLQLALSCWAIGFLLSVINVGCTLRHPFCGPNH-INHFFCELPVVLKLACADTHITEA 173
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 203 VLYVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIALV 282
Cdd:cd15424  174 IVFGAGVLILLVPLSVILTSYGLILASVLQMQSAAGRHKAFSTCASHLAVVTLFYGTVISMYMRPRSGSTPDRDKQIAVF 253
                        250       260
                 ....*....|....*....|....
gi 302564612 283 YTFVTPLLNPLIYTLRNKDVKDAL 306
Cdd:cd15424  254 YIVITPLLNPIIYTLRNKDVHGAA 277
7tmA_OR13-like cd15232
olfactory receptor family 13 and related proteins, member of the class A family of ...
41-299 8.83e-96

olfactory receptor family 13 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 13 (subfamilies 13A1 and 13G1) and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320360 [Multi-domain]  Cd Length: 270  Bit Score: 284.15  E-value: 8.83e-96
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  41 MILCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLA 120
Cdd:cd15232   13 AALTGNSLIILAISTSPKLHTPMYFFLVNLSLVDIICTSTVVPKLLQNLLTERKTISFGGCMAQLYFFTWSLGSELLLLT 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 121 IMAYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGHRQeINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15232   93 AMAYDRYVAICHPLHYSTIMRKEVCVGLATGVWAIGMLNSAVHTGLMLRLSFCGPNI-INHFFCEIPPLLLLSCSDTSLN 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 201 QAVLYVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIA 280
Cdd:cd15232  172 EIMAFVADVFFGVGNFLLTLTSYGFIIRSILRIRSTEGKKKAFSTCSSHLIVVSLYYSTVIYTYIRPSSSYSPEKDKVVA 251
                        250
                 ....*....|....*....
gi 302564612 281 LVYTFVTPLLNPLIYTLRN 299
Cdd:cd15232  252 VLYSVVTPTLNPLIYSLRN 270
7tmA_OR6N-like cd15914
olfactory receptor OR6N and related proteins, member of the class A family of ...
41-299 1.60e-95

olfactory receptor OR6N and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 6N, 6K, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320580 [Multi-domain]  Cd Length: 270  Bit Score: 283.49  E-value: 1.60e-95
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  41 MILCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLA 120
Cdd:cd15914   13 FIITGNLLIFTVVRLDTHLHTPMYFFISILSFLEIWYTTVTIPKMLSNLLSEEKTISFNGCLLQMYFFHSLGITECYLLT 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 121 IMAYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGHRQeINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15914   93 AMAYDRYLAICNPLHYPSIMTPKLCTQLAAGCWLCGFLGPVPEIILISTLPFCGPNQ-IQHIFCDFPPLLSLACTDTSLN 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 201 QAVLYVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIA 280
Cdd:cd15914  172 VLVDFVIHAVIILLTFLLILLSYVKIISVVLKIPSAEGRQKAFSTCAAHLTVVLLFFGSVSFMYLRLSKSYSLDYDRAIA 251
                        250
                 ....*....|....*....
gi 302564612 281 LVYTFVTPLLNPLIYTLRN 299
Cdd:cd15914  252 VVYAVLTPFFNPIIYSLRN 270
7tmA_OR5P-like cd15416
olfactory receptor subfamily 5P and related proteins, member of the class A family of ...
42-307 2.00e-94

olfactory receptor subfamily 5P and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5P and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320538 [Multi-domain]  Cd Length: 279  Bit Score: 281.18  E-value: 2.00e-94
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  42 ILCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLAI 121
Cdd:cd15416   14 TLLGNLSIILLIRISSQLHTPMYFFLSHLAFSDICYSSSVTPKMLVNFLVEKTTISYPGCAAQLCSAATFGTVECFLLAA 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 122 MAYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGhRQEINHFLCDVPPVLRLACADIHVHQ 201
Cdd:cd15416   94 MAYDRYVAICNPLLYSTIMSQKVCVLLVAASYLGGCLNALVFTTCVFSLSFCG-PNEINHFFCDFPPLLKLSCSDIRLAK 172
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 202 AVLYVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIAL 281
Cdd:cd15416  173 ILPSISSGIIILVTVLTIIISYLYILIAILRIRSTEGRHKAFSTCASHLTAVTLFYGTITFIYVMPNSSYSMDQNKVVSV 252
                        250       260
                 ....*....|....*....|....*.
gi 302564612 282 VYTFVTPLLNPLIYTLRNKDVKDALR 307
Cdd:cd15416  253 FYMVVIPMLNPLIYSLRNKEVKGALK 278
7tmA_OR12D-like cd15915
olfactory receptor subfamily 12D and related proteins, member of the class A family of ...
41-299 4.27e-94

olfactory receptor subfamily 12D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 12D and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320581 [Multi-domain]  Cd Length: 271  Bit Score: 279.96  E-value: 4.27e-94
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  41 MILCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLA 120
Cdd:cd15915   13 ASLLGNGAILAVVIAEPRLHSPMYFFLGNLSCLDIFYSSVTVPKMLAGLLSEHKTISFQGCISQLHFFHFLGSSEAMLLA 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 121 IMAYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGHrQEINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15915   93 VMAYDRYVAICNPLRYTVIMNPQVCLLLAVACWVTGFFHALMHTVMTSRLPFCGP-NKINHFFCDIKPLLKLACGDTSLN 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 201 QAVLYVVGILVLTIPFLLICVSYVFITCAILCI-RSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQI 279
Cdd:cd15915  172 LWLLNIVTGSIALGTFILTLLSYIYIISFLLLKvRSKEGRHKAFSTCASHLTVVLLLYGPALFTYIRPSSGDSLEQDRIV 251
                        250       260
                 ....*....|....*....|
gi 302564612 280 ALVYTFVTPLLNPLIYTLRN 299
Cdd:cd15915  252 ALLYTVVTPVLNPLIYTLRN 271
7tmA_OR6B-like cd15224
olfactory receptor subfamily 6B and related proteins, member of the class A family of ...
46-299 4.84e-94

olfactory receptor subfamily 6B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 6B, 6A, 6Y, 6P, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320352  Cd Length: 270  Bit Score: 279.94  E-value: 4.84e-94
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  46 NTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLAIMAYD 125
Cdd:cd15224   18 NLLIILTIWLNSQLHKPMYFFLSNLSFLEIWYISVTVPKLLAGFLSQNKSISFVGCMTQLYFFLSLACTECVLLAVMAYD 97
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 126 RYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGHRQeINHFLCDVPPVLRLACADIHVHQAVLY 205
Cdd:cd15224   98 RYVAICHPLRYPVIMTHQLCVQLAAGSWLSGFLISMIKVYFISQLSFCGPNV-INHFFCDISPLLNLSCTDMSLAELVDF 176
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 206 VVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIALVYTF 285
Cdd:cd15224  177 ILALIILLVPLLVTVASYICIISTVLRIPSATGRQKAFSTCASHLTVVIIFYSATLFMYARPKAISSFDSNKLVSVLYTV 256
                        250
                 ....*....|....
gi 302564612 286 VTPLLNPLIYTLRN 299
Cdd:cd15224  257 VTPLLNPIIYCLRN 270
7tmA_OR5J-like cd15415
olfactory receptor subfamily 5J and related proteins, member of the class A family of ...
43-307 9.20e-92

olfactory receptor subfamily 5J and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5J and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320537 [Multi-domain]  Cd Length: 279  Bit Score: 274.29  E-value: 9.20e-92
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  43 LCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLAIM 122
Cdd:cd15415   15 LLGNLGMIVLIRINPQLHTPMYFFLSNLSFVDLCYSSVFAPRLLVNFLVEKKTISYSACIAQHFFFAVFVTTEGFLLAVM 94
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 123 AYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGhRQEINHFLCDVPPVLRLACADIHVHQA 202
Cdd:cd15415   95 AYDRYVAICNPLLYTVAMTKRVCVQLVAGSYLGGLINSLTHTIGLLKLSFCG-PNVINHYFCDIPPLLKLSCSDTHINEL 173
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 203 VLYVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIALV 282
Cdd:cd15415  174 LLLTFSGVIAMSTLLTIIISYIFILFAILRIRSAEGRRKAFSTCASHLTAVTLFYGSVSFSYIQPSSQYSLEQEKVSAVF 253
                        250       260
                 ....*....|....*....|....*
gi 302564612 283 YTFVTPLLNPLIYTLRNKDVKDALR 307
Cdd:cd15415  254 YTLVIPMLNPLIYSLRNKDVKDALK 278
7tmA_OR5AR1-like cd15944
olfactory receptor subfamily 5AR1 and related proteins, member of the class A family of ...
16-310 2.08e-91

olfactory receptor subfamily 5AR1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5AR1 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320610 [Multi-domain]  Cd Length: 294  Bit Score: 273.97  E-value: 2.08e-91
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  16 FVFRVFTTATEFQVLLFLLFLLLYLMILCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKT 95
Cdd:cd15944    1 FILLGFTQDPQMQIILFVVFLIIYLVNVVGNLGMIILITTDSQLHTPMYFFLCNLSFCDLGYSSAIAPRMLADFLTKHKV 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  96 ISLAGCGAQMFFFVTLGSTDCFLLAIMAYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGH 175
Cdd:cd15944   81 ISFSGCATQFAFFVGFVDAECYVLAAMAYDRYVAICNPLLYSTLMSKRVCLQLMAGSYLAGLVNLVIHTTATFSLSFCGS 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 176 RqEINHFLCDVPPVLRLACADIHVHQAVLYVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLL 255
Cdd:cd15944  161 N-IINHFFCDVPPLLALSCSDTHINEILLYVFCGFVEMSSLSIILISYLFILVAILRMRSAEGRRKAFSTCASHFTGVTL 239
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 302564612 256 QYGCCSLVYLRPRSSTSEDEDRQIALVYTFVTPLLNPLIYTLRNKDVKDALRNAI 310
Cdd:cd15944  240 FYGTVIFMYLRPTSVYSLDQDKWASVFYTVVIPMLNPLIYSLRNKDVKEAFKKLI 294
7tmA_OR8K-like cd15413
olfactory receptor subfamily 8K and related proteins, member of the class A family of ...
45-307 1.77e-90

olfactory receptor subfamily 8K and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8K, 8U, 8J, 5R, 5AL and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320535  Cd Length: 279  Bit Score: 271.12  E-value: 1.77e-90
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  45 GNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLAIMAY 124
Cdd:cd15413   17 GNLGMIILTRLDSRLQTPMYFFLRHLAFVDLGYSTAVTPKMLVNFVVEQNTISFYACATQLAFFLTFIISELFLLSAMAY 96
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 125 DRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGHrQEINHFLCDVPPVLRLACADIHVHQAVL 204
Cdd:cd15413   97 DRYVAICNPLLYTVIMSQRVCIVLVAIPYLYSFFVALFHTIKTFRLSFCGS-NVINHFYCDDLPLLALSCSDTHEKELII 175
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 205 YVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIALVYT 284
Cdd:cd15413  176 LIFAGFNLISSLLIVLVSYLFILSAILRIRSAEGRQKAFSTCGSHLTVVTIFYGTLIFMYLQPKSSHSLDTDKMASVFYT 255
                        250       260
                 ....*....|....*....|...
gi 302564612 285 FVTPLLNPLIYTLRNKDVKDALR 307
Cdd:cd15413  256 LVIPMLNPLIYSLRNKEVKDALK 278
7tmA_OR10D-like cd15228
olfactory receptor subfamily 10D and related proteins, member of the class A family of ...
43-306 2.05e-89

olfactory receptor subfamily 10D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 10D and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320356 [Multi-domain]  Cd Length: 275  Bit Score: 268.15  E-value: 2.05e-89
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  43 LCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLAIM 122
Cdd:cd15228   15 LLGNLLILSAILSDPRLHTPMYFFLCNLSVFDIGFSSVSTPKMLAYLWGQSRVISLGGCMSQVFFYHFLGSTECLLYTVM 94
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 123 AYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGhRQEINHFLCDVPPVLRLACADIHVHQA 202
Cdd:cd15228   95 AYDRYVAICHPLRYLLIMNRRVCALLAAGTWITSSFHATILTSLTFTLPYCG-SNVVDYFFCDIFPVLKLACADTSIAET 173
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 203 VLYVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIalV 282
Cdd:cd15228  174 VSFTNVGLVPLTCFLLILASYVRIVISILKMRSAEGRRKAFSTCSSHLTVVTLFFGPCALIYTQPTPSPVLVTPVQI--F 251
                        250       260
                 ....*....|....*....|....
gi 302564612 283 YTFVTPLLNPLIYTLRNKDVKDAL 306
Cdd:cd15228  252 NNVVTPMLNPLIYTLRNKEVKAAL 275
7tmA_OR5B-like cd15407
olfactory receptor subfamily 5B and related proteins, member of the class A family of ...
43-308 1.42e-88

olfactory receptor subfamily 5B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5B and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320529  Cd Length: 279  Bit Score: 266.21  E-value: 1.42e-88
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  43 LCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLAIM 122
Cdd:cd15407   15 LVGNLGMILLILLDSRLHTPMYFFLSNLSLVDIGYSSAVTPKVMAGLLTGDKVISYNACAAQMFFFVVFATVENFLLASM 94
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 123 AYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCgHRQEINHFLCDVPPVLRLACADIHVHQA 202
Cdd:cd15407   95 AYDRHAAVCKPLHYTTTMTTKVCACLTIGCYVCGFLNASIHTGNTFRLSFC-KSNVINHFFCDIPPVLALSCSDIHISEI 173
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 203 VLYVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIALV 282
Cdd:cd15407  174 VLFFLASFNVFFALLVILISYLFIFITILRMRSAEGHQKAFSTCASHLTAVSIFYGTVIFMYLQPSSSHSMDTDKMASVF 253
                        250       260
                 ....*....|....*....|....*.
gi 302564612 283 YTFVTPLLNPLIYTLRNKDVKDALRN 308
Cdd:cd15407  254 YTMVIPMLNPLVYSLRNKEVKSAFKK 279
7tmA_OR4A-like cd15939
olfactory receptor 4A and related proteins, member of the class A family of ...
42-299 2.15e-88

olfactory receptor 4A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4A, 4C, 4P, 4S, 4X and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320605 [Multi-domain]  Cd Length: 267  Bit Score: 265.23  E-value: 2.15e-88
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  42 ILCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLAI 121
Cdd:cd15939   14 TVLGNLLIVVTIKASQTLGSPMYFFLSYLSFIDICYSSTTAPKLIVDLLSERKTISFNGCMTQLFAEHFFGGAEIFLLTV 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 122 MAYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGhRQEINHFLCDVPPVLRLACADIHvhq 201
Cdd:cd15939   94 MAYDRYVAICKPLHYTTIMNRRVCGLLVGVAWVGGFLHSTIQILLTLQLPFCG-PNVIDHFFCDLFPLLKLACTDTY--- 169
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 202 avlyVVGILVL-------TIPFLLICVSYVFITCAiLCIRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPrsSTSED 274
Cdd:cd15939  170 ----VIGLLVVansglicLLSFLILLISYIVILYS-LRTHSSEGRRKALSTCGSHITVVVLFFVPCIFIYMRP--VTTFP 242
                        250       260
                 ....*....|....*....|....*
gi 302564612 275 EDRQIALVYTFVTPLLNPLIYTLRN 299
Cdd:cd15939  243 IDKVVAVFYTIITPMLNPLIYTLRN 267
7tmA_OR9G-like cd15418
olfactory receptor subfamily 9G and related proteins, member of the class A family of ...
43-309 2.38e-88

olfactory receptor subfamily 9G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 9G and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320540 [Multi-domain]  Cd Length: 281  Bit Score: 265.88  E-value: 2.38e-88
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  43 LCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLAIM 122
Cdd:cd15418   16 LVGNLTLIALICLDSRLHTPMYFFVGNLSFLDLWYSSVYTPKILADCISKDKSISFAGCAAQFFFSAGLAYSECFLLAAM 95
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 123 AYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGhRQEINHFLCDVPPVLRLACADIHVHQA 202
Cdd:cd15418   96 AYDRYVAICNPLLYSSAMSKKLCMGLVAASYLGGFANAIIHTSNTFRLHFCG-DNIIDHFFCDLPPLVKLACDDTRVYEL 174
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 203 VLYVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIALV 282
Cdd:cd15418  175 ILYFILGFNVIAPTALILASYTFILAAILRIHSASGRHKAFSTCSAHLTSVTLYYGSILFIYSRPSSSHTPDRDKVVALF 254
                        250       260
                 ....*....|....*....|....*..
gi 302564612 283 YTFVTPLLNPLIYTLRNKDVKDALRNA 309
Cdd:cd15418  255 YTVVNPLLNPLIYSLRNKDVKEALKKL 281
7tmA_OR1330-like cd15946
olfactory receptor 1330 and related proteins, member of the class A family of ...
42-299 2.68e-88

olfactory receptor 1330 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes olfactory receptors 1330 from mouse, Olr859 from rat, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320612  Cd Length: 270  Bit Score: 265.50  E-value: 2.68e-88
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  42 ILCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLAI 121
Cdd:cd15946   14 ILLGNGLIITLICLDSRLHTPMYFFLSVLSLLDMSYVTTTVPQMLVHLLSHKKTISFTGCVAQMYIFLALGITECTLFSV 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 122 MAYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGhRQEINHFLCDVPPVLRLACADIHVHQ 201
Cdd:cd15946   94 MAYDRYVAICHPLRYKVIMSWGLCILMVAGSWVCGVFSSLLHTFFTMRLPYCG-PNEINHYFCEVPAVLKLACADTSLNE 172
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 202 AVLYVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIAL 281
Cdd:cd15946  173 MVDFVLGVIVLVVPLSLILASYVNIFKAILKIRSTQGRCKAFSTCASHITVVTMFYGPAMFMYMRPGSNYSPERDKKISL 252
                        250
                 ....*....|....*...
gi 302564612 282 VYTFVTPLLNPLIYTLRN 299
Cdd:cd15946  253 FYNVFTALLNPVIYSLRN 270
7tmA_OR7-like cd15234
olfactory receptor family 7 and related proteins, member of the class A family of ...
45-306 4.99e-88

olfactory receptor family 7 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 7 and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320362 [Multi-domain]  Cd Length: 277  Bit Score: 264.82  E-value: 4.99e-88
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  45 GNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLAIMAY 124
Cdd:cd15234   17 GNLLIILAVSSDSHLHTPMYFFLSNLSFADICFSSTTVPKMLVNIQTQSKSISYTGCLTQMCFFLLFGGLDNFLLAVMAY 96
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 125 DRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGHrQEINHFLCDVPPVLRLACADIHVHQAVL 204
Cdd:cd15234   97 DRYVAICHPLHYTVIMNPCLCGLLVLLSLLISILDSLLHSLMVLQLSFCTD-VEIPHFFCELAQVLKLACSDTLINNILI 175
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 205 YVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLrprSSTSEDEDRQIA---L 281
Cdd:cd15234  176 YLATVIFGGIPLSGIIFSYYKIVSSILRIPSSGGKYKAFSTCGSHLSVVSLFYGTGLGVYI---SSAVTHSSRKTAvasV 252
                        250       260
                 ....*....|....*....|....*
gi 302564612 282 VYTFVTPLLNPLIYTLRNKDVKDAL 306
Cdd:cd15234  253 MYTVVTPMLNPFIYSLRNKDMKGAL 277
7tmA_OR8D-like cd15406
olfactory receptor subfamily 8D and related proteins, member of the class A family of ...
45-310 4.01e-87

olfactory receptor subfamily 8D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8D and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320528 [Multi-domain]  Cd Length: 290  Bit Score: 263.07  E-value: 4.01e-87
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  45 GNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLAIMAY 124
Cdd:cd15406   26 GNLGMILLITLSSQLHTPMYYFLSNLSFIDLCYSSVITPKMLVNFVSEKNIISYPECMTQLFFFCVFAIAECYMLTAMAY 105
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 125 DRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGHrQEINHFLCDVPPVLRLACADIHVHQAVL 204
Cdd:cd15406  106 DRYVAICNPLLYNVTMSPRVCSLLVAGVYIMGLIGATVHTSCMLRLSFCGD-NVINHYFCDILPLLKLSCSSTYINELLL 184
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 205 YVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIALVYT 284
Cdd:cd15406  185 FIVGGFNVLATTLAILISYAFILSSILRIRSAEGRSKAFSTCSSHLAAVGVFYGSIIFMYLKPSSSSSMTQEKVSSVFYT 264
                        250       260
                 ....*....|....*....|....*.
gi 302564612 285 FVTPLLNPLIYTLRNKDVKDALRNAI 310
Cdd:cd15406  265 TVIPMLNPLIYSLRNKDVKNALKKVL 290
7tmA_OR2D-like cd15428
olfactory receptor subfamily 2D and related proteins, member of the class A family of ...
41-306 1.99e-86

olfactory receptor subfamily 2D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2D and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320545 [Multi-domain]  Cd Length: 277  Bit Score: 260.87  E-value: 1.99e-86
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  41 MILCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLA 120
Cdd:cd15428   13 MTVLGNLLLVLLVIVDSHLHTPMYFFLSNLSVLELCYTTTVVPQMLVHLLSERKIISFIRCAAQLYFFLSFGITECALLS 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 121 IMAYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGHrQEINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15428   93 VMSYDRYVAICLPLRYSLIMTWKVCISLATGSWVGGLLVSAVDTAFTLNLSFGGH-NKINHFLCEMPALLKLASTDTHQA 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 201 QAVLYVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIA 280
Cdd:cd15428  172 EMAMFIMCVFTLVLPVLLILASYTRIIYTVFGMQSLTGRLKAFSTCSSHLMVVSLFYGSVLSTYMRPKSSTSKEYDKMIS 251
                        250       260
                 ....*....|....*....|....*.
gi 302564612 281 LVYTFVTPLLNPLIYTLRNKDVKDAL 306
Cdd:cd15428  252 VFYIIVTPMLNPLIYSLRNKEVKHAL 277
7tmA_OR11G-like cd15913
olfactory receptor OR11G and related proteins, member of the class A family of ...
43-299 1.60e-85

olfactory receptor OR11G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 11G, 11H, and related proteins in other mammals, and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320579  Cd Length: 270  Bit Score: 258.40  E-value: 1.60e-85
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  43 LCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLAIM 122
Cdd:cd15913   15 LLGNGAIICAVWWDRRLHTPMYILLGNFSFLEICYVTSTVPNMLVNFLSETKTISFSGCFLQFYFFFSLGTTECFFLSVM 94
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 123 AYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGHRQeINHFLCDVPPVLRLACADIHVHQA 202
Cdd:cd15913   95 AFDRYLAICRPLHYPTIMTGQLCGKLVAFCWVCGFLWFLIPVVLISQLPFCGPNI-IDHFLCDPGPLLALSCVPAPGTEL 173
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 203 VLYVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIALV 282
Cdd:cd15913  174 ICYTLSSLIIFGTFLFILGSYTLVLRAVLRVPSAAGRHKAFSTCGSHLAVVSLFYGSVMVMYVSPGSGNSTGMQKIVTLF 253
                        250
                 ....*....|....*..
gi 302564612 283 YTFVTPLLNPLIYTLRN 299
Cdd:cd15913  254 YSVVTPLLNPLIYSLRN 270
7tmA_OR10G-like cd15916
olfactory receptor subfamily 10G and related proteins, member of the class A family of ...
45-306 2.95e-84

olfactory receptor subfamily 10G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 10G, 10S, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320582 [Multi-domain]  Cd Length: 276  Bit Score: 255.07  E-value: 2.95e-84
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  45 GNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQ-KTISLAGCGAQMFFFVTLGSTDCFLLAIMA 123
Cdd:cd15916   17 GNLLILLTVWVDSHLHRPMYIFLGHLSFLDMWLSTVTVPKMLAGFLEPGgKVISFGGCVAQLYFFHFLGSTECFLYTLMA 96
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 124 YDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGHRQeINHFLCDVPPVLRLACADIHVHQAV 203
Cdd:cd15916   97 YDRYLAICHPLHYPTIMTGRLCTRLATGTWVAGSLHSAIHTSLTFRLPFCGPNR-IDYFFCDIPPLLKLACADTTINELV 175
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 204 LYVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSedEDRQIALVY 283
Cdd:cd15916  176 IFASIGVVALGCFILILLSYGNIVRAILRIRTAEGRRRAFSTCASHLIVVLCFYVPCVFIYLRPGSKEA--LDGVIAVFY 253
                        250       260
                 ....*....|....*....|...
gi 302564612 284 TFVTPLLNPLIYTLRNKDVKDAL 306
Cdd:cd15916  254 TVVTPLLNPLIYTLRNKEVKTAL 276
7tmA_OR2Y-like cd15433
olfactory receptor subfamily 2Y and related proteins, member of the class A family of ...
41-306 2.02e-81

olfactory receptor subfamily 2Y and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2Y, 2I, and related protein in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320550 [Multi-domain]  Cd Length: 277  Bit Score: 248.17  E-value: 2.02e-81
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  41 MILCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLA 120
Cdd:cd15433   13 LTLVGNTIIILLSVRDLRLHTPMYYFLCHLSFVDLCFTTSTVPQLLANLRGPALTITRGGCVAQLFISLALGSAECVLLA 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 121 IMAYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGHRQeINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15433   93 VMAFDRYAAVCRPLHYAALMSPRLCQTLASISWLSGFVNSVAQTGLLAERPLCGHRL-LDHFFCEMPVFLKLACGDDETT 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 201 QAVLYVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIA 280
Cdd:cd15433  172 EVQMFVARVVILLLPAALILGSYGHVAHAVLRIKSSAGRRRAFGTCGSHLMVVFLFYGSAIYTYLQPIHRYSQAHGKFVS 251
                        250       260
                 ....*....|....*....|....*.
gi 302564612 281 LVYTFVTPLLNPLIYTLRNKDVKDAL 306
Cdd:cd15433  252 LFYTVMTPALNPLIYTLRNKDVKGAL 277
7tmA_OR4-like cd15226
olfactory receptor family 4 and related proteins, member of the class A family of ...
42-299 6.42e-81

olfactory receptor family 4 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 4 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320354 [Multi-domain]  Cd Length: 267  Bit Score: 246.35  E-value: 6.42e-81
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  42 ILCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLAI 121
Cdd:cd15226   14 TVLGNLLIVVTVTSDPHLHSPMYFLLANLSFIDLCLSSFATPKMICDLLREHKTISFGGCMAQIFFLHFFGGSEMVLLIA 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 122 MAYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGHRqEINHFLCDVPPVLRLACADIhvhq 201
Cdd:cd15226   94 MAFDRYVAICKPLHYLTIMSPRMCILLVVASWIIGFIHSLSQLAFVVNLPFCGPN-VVDSFFCDLPLVIKLACTDT---- 168
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 202 avlYVVGILVLT-------IPFLLICVSYVFITCAIlCIRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSed 274
Cdd:cd15226  169 ---YVLELMVVAnsglislVCFLLLLISYIVILVTV-RKHSSGGSSKALSTCSAHITVVVLFFGPCIFIYVWPFSTFP-- 242
                        250       260
                 ....*....|....*....|....*
gi 302564612 275 EDRQIALVYTFVTPLLNPLIYTLRN 299
Cdd:cd15226  243 VDKFLAVFYTVITPLLNPIIYTLRN 267
7tmA_OR4E-like cd15940
olfactory receptor 4E and related proteins, member of the class A family of ...
41-299 3.16e-79

olfactory receptor 4E and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4E and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320606 [Multi-domain]  Cd Length: 267  Bit Score: 241.96  E-value: 3.16e-79
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  41 MILCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLA 120
Cdd:cd15940   13 LTLSGNILIMITIVMDPRLHTPMYFFLSNLSFIDICHSSVTVPKMLSDLLSEEKTISFNGCVTQLFFLHLFACTEIFLLT 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 121 IMAYDRYVAICHPLHYTLIMTRKLCAQMlVGALGLALFL-SLQLTALIFTLPFCGHRqEINHFLCDVPPVLRLACADIHV 199
Cdd:cd15940   93 IMAYDRYVAICNPLHYPTVMNHKVCLWL-VAALWLGGTVhSLAQTFLTIRLPYCGPN-EIDSFFCDVPPVIKLACTDTYL 170
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 200 HQAVLYVVGILVLTIPFLLICVSYVFITCAILCiRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPrsSTSEDEDRQI 279
Cdd:cd15940  171 IDILIVSNSGLISLVCFVALLGSYIVILVSLRK-RSTEGRRKALSTCASHLTVVTLFFGPCIFIYTRP--STSFSEDKVV 247
                        250       260
                 ....*....|....*....|
gi 302564612 280 ALVYTFVTPLLNPLIYTLRN 299
Cdd:cd15940  248 SVFYTVVTPLLNPIIYTLRN 267
7tmA_OR1E-like cd15236
olfactory receptor subfamily 1E and related proteins, member of the class A family of ...
45-306 4.63e-79

olfactory receptor subfamily 1E and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 1E, 1J, and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320364 [Multi-domain]  Cd Length: 277  Bit Score: 241.98  E-value: 4.63e-79
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  45 GNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLAIMAY 124
Cdd:cd15236   17 GNLLIILLIRLDSHLHTPMYFFLSHLAFTDVSFSSVTVPKMLMNMQTQDQSIPYAGCISQMYFFIFFGCLDSFLLAVMAY 96
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 125 DRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGHrQEINHFLCDVPPVLRLACADIHVHQAVL 204
Cdd:cd15236   97 DRYVAICHPLHYTAIMRPELCVLLVAGSWVLTCFHALLHTLLLARLSFCAD-NVIPHFFCDLVALLKLSCSSTSLNELVI 175
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 205 YVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIALVYT 284
Cdd:cd15236  176 FTEGGLLFVLPLLLILGSYIRIAATILKVPSTKGICKAFSTCGSHLSVVFLYYGTIIGVYFFPSSNNSSDKDIVASVMYT 255
                        250       260
                 ....*....|....*....|..
gi 302564612 285 FVTPLLNPLIYTLRNKDVKDAL 306
Cdd:cd15236  256 VVTPMLNPFIYSLRNRDIKGAL 277
7tmA_OR3A-like cd15233
olfactory receptor subfamily 3A3 and related proteins, member of the class A family of ...
45-306 2.08e-78

olfactory receptor subfamily 3A3 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 3A3 and 3A4, and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320361 [Multi-domain]  Cd Length: 277  Bit Score: 240.46  E-value: 2.08e-78
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  45 GNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLAIMAY 124
Cdd:cd15233   17 GNLSILAAILLEPKLHTPMYFFLGNLSLLDIGCISVTVPQMLVHLLSHKRTISYAACLSQLFFFHLLAGADCFLLTAMAY 96
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 125 DRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGHRqEINHFLCDVPPVLRLACADIHVHQAVL 204
Cdd:cd15233   97 DRYLAICQPLTYSVRMSWRVQTALVGISCACAFTNALTHTVAMSTLKFCGPN-VINHFFCDLPPLFQLSCSSTHLNELLL 175
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 205 YVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIALVYT 284
Cdd:cd15233  176 FVFAFFMALAPCVLIVVSYAHVVAAVLRIRSAEGRRKAFSTCGSHLTVVCIFYGTGVFSYMRLGSVYSSDKDKVIGILNT 255
                        250       260
                 ....*....|....*....|..
gi 302564612 285 FVTPLLNPLIYTLRNKDVKDAL 306
Cdd:cd15233  256 VLSPMLNPLIYSLRNKDVKGAL 277
7tmA_OR10S1-like cd15941
olfactory receptor subfamily 10S1 and related proteins, member of the class A family of ...
41-306 2.83e-77

olfactory receptor subfamily 10S1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10S1 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320607 [Multi-domain]  Cd Length: 277  Bit Score: 237.44  E-value: 2.83e-77
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  41 MILCGNTAIIWVVCTRSTLRT-PMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQ-KTISLAGCGAQMFFFVTLGSTDCFL 118
Cdd:cd15941   13 LTVLGNLLILLTIGSDPHLHGlPMYHFLGHLSFLDACLSSVTVPKVLAGLLTLSgRTISFEGCVVQLYAFHFLASTECFL 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 119 LAIMAYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGHRQeINHFLCDVPPVLRLACADIH 198
Cdd:cd15941   93 YTVMAYDRYLAICHPLHYPTAMNRRMCAGLAGGTWATGATHAAIHTSLTFRLPYCGPCQ-IAYFFCDIPPVLKLACADTT 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 199 VHQAVLYVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPRSstSEDEDRQ 278
Cdd:cd15941  172 INELVILANIGIVAAGCFLLIVISYIYIVAAVLRIRTAEGRQRAFSTCSAHLTGVLLYYVPSVFIYLQPSS--SQAGAGA 249
                        250       260
                 ....*....|....*....|....*...
gi 302564612 279 IALVYTFVTPLLNPLIYTLRNKDVKDAL 306
Cdd:cd15941  250 PAVFYTIVTPMLNPFIYTLRNKEVKRAL 277
7tmA_OR8B-like cd15405
olfactory receptor subfamily 8B and related proteins, member of the class A family of ...
45-306 1.47e-76

olfactory receptor subfamily 8B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8B and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320527 [Multi-domain]  Cd Length: 277  Bit Score: 235.77  E-value: 1.47e-76
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  45 GNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLAIMAY 124
Cdd:cd15405   17 GNLGLITLICLNSHLHTPMYFFLFNLSFIDLCYSSVFTPKMLMNFVSEKNTISYAGCMTQLFFFCFFVISECYVLTAMAY 96
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 125 DRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGHRQeINHFLCDVPPVLRLACADIHVHQAVL 204
Cdd:cd15405   97 DRYVAICNPLLYTVTMSPQVCSLLMLGSYVMGFAGAMAHTGCMLRLTFCDSNI-INHYMCDILPLLQLSCTSTYVNELVV 175
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 205 YVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIALVYT 284
Cdd:cd15405  176 FVVVGINIIVPSVTIFISYALILSNILHISSTEGRSKAFSTCSSHIIAVSLFFGSGAFMYLKPSSVGSVNQGKVSSVFYT 255
                        250       260
                 ....*....|....*....|..
gi 302564612 285 FVTPLLNPLIYTLRNKDVKDAL 306
Cdd:cd15405  256 NVVPMLNPLIYSLRNKDVKLAL 277
7tmA_OR4D-like cd15936
olfactory receptor 4D and related proteins, member of the class A family of ...
41-299 1.75e-75

olfactory receptor 4D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4D and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320602 [Multi-domain]  Cd Length: 267  Bit Score: 232.61  E-value: 1.75e-75
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  41 MILCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLA 120
Cdd:cd15936   13 TTWLGNLLIIITVISDPHLHTPMYFLLANLAFLDISFSSVTAPKMLSDLLSQTKTISFNGCMAQMFFFHFTGGAEVFLLS 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 121 IMAYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGhRQEINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15936   93 VMAYDRYIAIHKPLHYLTIMNQGVCTGLVAGSWLGGFAHSIVQVALLLQLPFCG-PNVLDNFYCDVPQVIKLACTDTFLL 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 201 QAVLYVVGILVLTIPFLLICVSYVFITCAILcIRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSedEDRQIA 280
Cdd:cd15936  172 ELLMVSNSGLVTLLIFFILLISYTVILVKIR-THVTEGKRKALSTCASQITVVTLIFVPCIYIYARPFQTFP--MDKAVS 248
                        250
                 ....*....|....*....
gi 302564612 281 LVYTFVTPLLNPLIYTLRN 299
Cdd:cd15936  249 VLYTVITPMLNPMIYTLRN 267
7tmA_OR10G6-like cd15942
olfactory receptor subfamily 10G6 and related proteins, member of the class A family of ...
43-306 7.32e-75

olfactory receptor subfamily 10G6 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10G6 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320608  Cd Length: 275  Bit Score: 231.17  E-value: 7.32e-75
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  43 LCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLAIM 122
Cdd:cd15942   15 LSGNSLIILVVISDLQLHKPMYWFLCHLSILDMAVSTVVVPKVIAGFLSGGRIISFGGCVTQLFFFHFLGCAECFLYTVM 94
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 123 AYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGhRQEINHFLCDVPPVLRLACADIHVHQA 202
Cdd:cd15942   95 AYDRFLAICKPLHYSTIMNHRACLCLSLGTWLGGCLHSTFQTSLTFRLPYGQ-KNEVDYIFCDIPAMLKLACADTAFNEL 173
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 203 VLYV-VGILVLTIpFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPrsSTSEDEDRQIAL 281
Cdd:cd15942  174 VTFIdIGLVAMTC-FLLILMSYVYIVSAILKIPSAEGQRRAFSTCTAHLTVVVIYYVPLTFIYLRP--GSQDPLDGVVAV 250
                        250       260
                 ....*....|....*....|....*
gi 302564612 282 VYTFVTPLLNPLIYTLRNKDVKDAL 306
Cdd:cd15942  251 FYTTVTPLLNPVIYTLRNKEMKDAL 275
7tmA_OR4Q2-like cd15938
olfactory receptor 4Q2 and related proteins, member of the class A family of ...
41-299 5.40e-71

olfactory receptor 4Q2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 4Q2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320604 [Multi-domain]  Cd Length: 265  Bit Score: 220.90  E-value: 5.40e-71
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  41 MILCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLA 120
Cdd:cd15938   13 MVLVGNLLIMVTVRSDPKLSSPMYFLLGNLSFLDLCYSTVTCPKMLVDFLSQRKAISYEACIAQLFFLHFVGAAEMFLLT 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 121 IMAYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGHRQeINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15938   93 VMAYDRYVAICKPLHYTTIMSRRLCWVLVAASWAGGFLHSIVQTLLTIQLPFCGPNQ-VNNFFCDVPPVIKLACTDTCVT 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 201 QAVLYVVGILVLTIPFLLICVSYVFItcaILCIRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSedEDRQIA 280
Cdd:cd15938  172 ELLMVSNSGLISTVCFVVLVTSYTTI---LVTIRSTEGRRKALSTCASHLMVVTLFFGPCIFIYARPFSTFP--VDKHVS 246
                        250
                 ....*....|....*....
gi 302564612 281 LVYTFVTPLLNPLIYTLRN 299
Cdd:cd15938  247 VLYNVITPMLNPLIYTLRN 265
7tmA_OR4N-like cd15937
olfactory receptor 4N, 4M, and related proteins, member of the class A family of ...
41-299 6.81e-62

olfactory receptor 4N, 4M, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4N, 4M, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320603  Cd Length: 267  Bit Score: 197.65  E-value: 6.81e-62
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  41 MILCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLA 120
Cdd:cd15937   13 IILPGNILIILTIQGDPQLGSPMYFFLANLALLDICYSSITPPKMLADFFSERKTISYGGCMAQLFFLHFLGAAEMFLLV 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 121 IMAYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGhRQEINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15937   93 AMAYDRYVAICKPLHYTTVVNRRVCCVLVGASWAGGFIHSIIQVALIIRLPFCG-PNVLDNFFCDITQVIKLACTNTYTV 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 201 QAVLYVVGILVLTIPFLLICVSYVFITCAiLCIRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSedEDRQIA 280
Cdd:cd15937  172 ELLMFSNSGLVILLCFLLLLISYAFLLAK-LRTHSSKGKSKAASTCITHIIIVFVMFGPAIYIYARPFRSFP--MDKVVA 248
                        250
                 ....*....|....*....
gi 302564612 281 LVYTFVTPLLNPLIYTLRN 299
Cdd:cd15937  249 VFHTVIFPLLNPMIYTLRN 267
7tmA_OR4Q3-like cd15935
olfactory receptor 4Q3 and related proteins, member of the class A family of ...
42-299 3.59e-61

olfactory receptor 4Q3 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 4Q3 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320601 [Multi-domain]  Cd Length: 268  Bit Score: 195.75  E-value: 3.59e-61
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  42 ILCGNTAIIWVVCTRSTLR-TPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLA 120
Cdd:cd15935   14 ILLGNLLIVVTVHADPHLLqSPMYFFLANLSLIDMTLGSVAVPKVLADLLTCGRTISFGGCMAQLFFLHFLGGSEMLLLT 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 121 IMAYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGhRQEINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15935   94 LMAYDRYVAICHPLRYLAVMNRQLCIKLLAACWAGGFLHSATQAALVLRLPFCG-PNELDNFYCDVPQVIKLACMDTYVV 172
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 201 QAVLYVVGILVLTIPFLLICVSYVFITcAILCIRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSedEDRQIA 280
Cdd:cd15935  173 EVLMVANSGLLSLVCFLVLLVSYGIIL-TTLRGRFREGGGKALSTCSSHLTVVSLIFVPCIFVYLRPFSSSS--VDKVAS 249
                        250
                 ....*....|....*....
gi 302564612 281 LVYTFVTPLLNPLIYTLRN 299
Cdd:cd15935  250 VFYTLITPALNPLIYTLRN 268
7tmA_OR56-like cd15223
olfactory receptor family 56 and related proteins, member of the class A family of ...
42-306 9.03e-58

olfactory receptor family 56 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 56 and related proteins in other mammals, sauropsids, and fishes. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320351 [Multi-domain]  Cd Length: 279  Bit Score: 187.50  E-value: 9.03e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  42 ILCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLAI 121
Cdd:cd15223   14 ALVANSLLLLIIKLERSLHQPMYILLGILAAVDIVLATTILPKMLAIFWFDANTISLPGCFAQMFFIHFFTAMESSILLV 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 122 MAYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGhRQEINHFLCDVPPVLRLACADIHVHQ 201
Cdd:cd15223   94 MALDRYVAICKPLRYPSIITKSFILKLVLFALIRSGLLVLPIVVLASQLSYCS-SNVIEHCYCDHMALVSLACGDTTINS 172
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 202 AVLYVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLLQY--GCCSLVYLRPRSSTSEDEDRQI 279
Cdd:cd15223  173 IYGLAVAWLIVGSDIILIFFSYALILRAVLRLASGEARSKALNTCGSHLIVILFFYtaVLVSSLTYRFGKTIPPDVHVLL 252
                        250       260
                 ....*....|....*....|....*..
gi 302564612 280 ALVYTFVTPLLNPLIYTLRNKDVKDAL 306
Cdd:cd15223  253 SVLYILIPPALNPIIYGVRTKEIRQGF 279
7tmA_OR51-like cd15222
olfactory receptor family 51 and related proteins, member of the class A family of ...
41-300 2.20e-53

olfactory receptor family 51 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 51 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320350  Cd Length: 275  Bit Score: 176.15  E-value: 2.20e-53
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  41 MILCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLA 120
Cdd:cd15222   13 VALLGNSTILFVIKTEPSLHEPMYYFLSMLAVTDLGLSLSTLPTVLGIFWFNAREISFDACLAQMFFIHTFSFMESSVLL 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 121 IMAYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCgHRQEINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15222   93 AMAFDRFVAICNPLRYASILTNSRIAKIGLAIVLRSVLLLLPLPFLLKRLPFC-HSNVLSHSYCLHQDVMKLACSDTRVN 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 201 QAVLYVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLLQYG---CCSLVYlRPRSSTSEDEDR 277
Cdd:cd15222  172 SIYGLFVVLSTMGLDSLLILLSYVLILKTVLGIASREERLKALNTCVSHICAVLIFYVpmiGLSMVH-RFGKHASPLVHV 250
                        250       260
                 ....*....|....*....|...
gi 302564612 278 QIALVYTFVTPLLNPLIYTLRNK 300
Cdd:cd15222  251 LMANVYLLVPPVLNPIIYSVKTK 273
7tmA_OR51_52-like cd15917
olfactory receptor family 51, 52, 56 and related proteins, member of the class A family of ...
43-300 1.26e-52

olfactory receptor family 51, 52, 56 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor families 51, 52, 56, and related proteins in other mammals, sauropsids, amphibians, and fishes. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 341351  Cd Length: 275  Bit Score: 174.01  E-value: 1.26e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  43 LCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLAIM 122
Cdd:cd15917   15 LLGNITILFVIKIESSLHEPMYLFLAMLAATDLVLSTSTVPKMLGIFWFNAREISFDACLAQMFFIHSFTAMESGVLLAM 94
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 123 AYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGHRQeINHFLCDVPPVLRLACADIHVHQA 202
Cdd:cd15917   95 AFDRYVAICYPLRYTTILTNTVVGKIGLAILLRAVALIIPLPLLVRRLPYCGSNV-ISHSYCEHMAVVKLACGDTRVNSI 173
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 203 VLYVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIAL- 281
Cdd:cd15917  174 YGLFVALLIVGFDLLFIALSYVLILRAVLQLPSKEARLKALSTCGSHICVILIFYTPALFSFLTHRFGHHVPPHVHILLa 253
                        250       260
                 ....*....|....*....|
gi 302564612 282 -VYTFVTPLLNPLIYTLRNK 300
Cdd:cd15917  254 nLYLLLPPMLNPIVYGVRTK 273
7tmA_OR52I-like cd15950
olfactory receptor subfamily 52I and related proteins, member of the class A family of ...
41-302 2.83e-51

olfactory receptor subfamily 52I and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52I and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320616  Cd Length: 275  Bit Score: 170.67  E-value: 2.83e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  41 MILCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLA 120
Cdd:cd15950   13 IALLGNGTILLVIKLDPSLHEPMYYFLCMLAVIDLVMSTSIVPKMLSIFWLGSAEISFEACFTQMFFVHSFTAVESGVLL 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 121 IMAYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGHRQeINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15950   93 AMAFDRYVAICHPLRYSAILTSQVIAQIGLAIVLRALLFMTPLTCLVTSLPYCGSRV-VPHSYCEHMAVVKLACADPRPS 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 201 QAVLYVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLLQY--GCCSLVYLRPRSSTSEDEDRQ 278
Cdd:cd15950  172 SLYSITGSTLVVGTDSAFIAVSYGLILRAVLGLSSKEARLKAFSTCGSHVCVILLFYipGLLSIYTQRFGQGVPPHTQVL 251
                        250       260
                 ....*....|....*....|....
gi 302564612 279 IALVYTFVTPLLNPLIYTLRNKDV 302
Cdd:cd15950  252 LADLYLLVPPMLNPIIYGMRTKQI 275
7tmA_OR52E-like cd15952
olfactory receptor subfamily 52E and related proteins, member of the class A family of ...
43-302 4.06e-51

olfactory receptor subfamily 52E and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52E and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320618  Cd Length: 274  Bit Score: 170.25  E-value: 4.06e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  43 LCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLAIM 122
Cdd:cd15952   15 LLGNCTILFVIKTEQSLHQPMFYFLAMLSTIDLGLSTATIPKMLGIFWFNLREISFGGCLAQMFFIHTFTGMESAVLVAM 94
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 123 AYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGHRQeINHFLCDVPPVLRLACADIHVHqa 202
Cdd:cd15952   95 AFDRYVAICNPLRYTTILTNKVISVIALGIVLRPLLLVLPFVFLILRLPFCGHNI-IPHTYCEHMGIAKLACASIRIN-- 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 203 VLYVVG-ILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQI-- 279
Cdd:cd15952  172 IIYGLFaISVLVLDVILIALSYVLILRAVFRLPSHDARLKALSTCGSHVCVILAFYTPALFSFLTHRFGHNIPRYIHIll 251
                        250       260
                 ....*....|....*....|...
gi 302564612 280 ALVYTFVTPLLNPLIYTLRNKDV 302
Cdd:cd15952  252 ANLYVVLPPMLNPVIYGVRTKQI 274
7tmA_OR52B-like cd15221
olfactory receptor subfamily 52B and related proteins, member of the class A family of ...
43-300 6.39e-51

olfactory receptor subfamily 52B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor (OR) subfamilies 52B, 52D, 52H and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320349  Cd Length: 275  Bit Score: 169.78  E-value: 6.39e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  43 LCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLAIM 122
Cdd:cd15221   15 LLGNSLLLFVIVTERSLHEPMYLFLSMLAVTDLLLSTTTVPKMLAIFWFGAGEISFDGCLTQMFFVHFVFVTESAILLAM 94
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 123 AYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGHRQeINHFLCDVPPVLRLACADIHVHQA 202
Cdd:cd15221   95 AFDRYVAICYPLRYTTILTHSVIGKIGVAAVARSFCIVFPFVFLLKRLPYCGHNV-IPHTYCEHMGIARLACADITVNIW 173
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 203 VLYVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIAL- 281
Cdd:cd15221  174 YGLTVALLTVGLDVVLIAVSYALILRAVFRLPSKDARLKALSTCGSHVCVILMFYTPAFFSFLTHRFGRHIPRHVHILLa 253
                        250       260
                 ....*....|....*....|
gi 302564612 282 -VYTFVTPLLNPLIYTLRNK 300
Cdd:cd15221  254 nLYVLVPPMLNPIVYGVKTK 273
7tmA_OR52P-like cd15953
olfactory receptor subfamily 52P and related proteins, member of the class A family of ...
42-300 5.55e-50

olfactory receptor subfamily 52P and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52P and related proteins in other mammals, sauropsids and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 341354  Cd Length: 275  Bit Score: 167.06  E-value: 5.55e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  42 ILCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLAI 121
Cdd:cd15953   14 TLLGNCTILFVVGKEQSLHKPMYLLLCMLALTDLVLSTSVVPKALCIFWFNLKEITFSGCLTQMFFIHTLSIMESAVLVA 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 122 MAYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGHRQeINHFLCDVPPVLRLACADIHVHQ 201
Cdd:cd15953   94 MAFDRYVAICNPLRYATILTNSRIAKLGLVGLIRGVLLILPLPLLLSRLPFCANRI-IPHTYCEHMAVVKLACGDTTINR 172
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 202 AVLYVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIAL 281
Cdd:cd15953  173 IYGLVVALLVVGLDLLLIALSYALIIRAVLRLSSKKARQKALNTCTAHICVILMSYTPALFSFLTHRFGQGIAPHIHIIL 252
                        250       260
                 ....*....|....*....|.
gi 302564612 282 --VYTFVTPLLNPLIYTLRNK 300
Cdd:cd15953  253 anLYLLVPPMLNPIIYGVKTK 273
7tmA_OR52R_52L-like cd15951
olfactory receptor subfamily 52R, 52L, and related proteins, member of the class A family of ...
43-302 1.19e-43

olfactory receptor subfamily 52R, 52L, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamilies 52R, 52L and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320617  Cd Length: 275  Bit Score: 150.96  E-value: 1.19e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  43 LCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLAIM 122
Cdd:cd15951   15 LLGNFTILFIVKTEPSLHEPMYLFLCMLAITDLVLSTSTLPKMLSIFWFNSREIDFSACLTQMFFIHSFSTMESGIFVAM 94
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 123 AYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGHRQeINHFLCDVPPVLRLACADIHVHQA 202
Cdd:cd15951   95 ALDRYVAICNPLRHSTILTNSVVAKIGLAVVLRGGILVSPHPFLLRRLPYCRTNI-IPHTYCEHMAVVKLACADTRVSRA 173
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 203 VLYVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQI--A 280
Cdd:cd15951  174 YGLSVAFLVGGLDVIFIAVSYIQILRAVFKLPSKEARLKTFGTCGSHICVILVFYIPALFSFLTHRFGHNVPPHVHIliA 253
                        250       260
                 ....*....|....*....|..
gi 302564612 281 LVYTFVTPLLNPLIYTLRNKDV 302
Cdd:cd15951  254 NVYLLVPPMLNPIIYGVRTKQI 275
7tm_4 pfam13853
Olfactory receptor; The members of this family are transmembrane olfactory receptors.
41-310 4.72e-41

Olfactory receptor; The members of this family are transmembrane olfactory receptors.


Pssm-ID: 404695  Cd Length: 278  Bit Score: 144.18  E-value: 4.72e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612   41 MILCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLA 120
Cdd:pfam13853   7 IIFLGNGTILFVIKTESSLHQPMYLFLAMLALIDLGLSASTLPTVLGIFWFGLREISFEACLTQMFFIHKFSIMESAVLL 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  121 IMAYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGHrQEINHFLCDVPPVLRLACADIHVH 200
Cdd:pfam13853  87 AMAVDRFVAICSPLRYTTILTNPVISRIGLGVSVRSFILVLPLPFLLRRLPFCGH-HVLSHSYCLHMGLARLSCADIKVN 165
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  201 QAVLYVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQI- 279
Cdd:pfam13853 166 NIYGLFVVTSTFGIDSLLIVLSYGLILRTVLGIASREGRLKALNTCGSHVCAVLAFYTPMIGLSMVHRFGHNVPPLLQIm 245
                         250       260       270
                  ....*....|....*....|....*....|..
gi 302564612  280 -ALVYTFVTPLLNPLIYTLRNKDVKDALRNAI 310
Cdd:pfam13853 246 mANAYLFFPPVLNPIVYSVKTKQIRDCVKRML 277
7tmA_OR52K-like cd15948
olfactory receptor subfamily 52K and related proteins, member of the class A family of ...
43-303 3.33e-40

olfactory receptor subfamily 52K and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52K and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320614 [Multi-domain]  Cd Length: 277  Bit Score: 141.97  E-value: 3.33e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  43 LCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLAIM 122
Cdd:cd15948   16 LLGNCTLLYVIKTEPSLHEPMFYFLAMLAVIDLVLSTTTVPKILSIFWFNSREINFNACLVQMFFLHSFSIMESAVLLAM 95
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 123 AYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGHrQEINHFLCDVPPVLRLACADIHVHQA 202
Cdd:cd15948   96 AFDRYVAICNPLRYATILTNSVITKIGLAALARAVTLMTPLPFLLRRLPYCRS-HVIAHCYCEHMAVVKLACGDTRFNNI 174
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 203 VLYVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLLQYG--CCSLVYLRPRSSTSEDEDRQIA 280
Cdd:cd15948  175 YGIAVALFIVGLDLMFIILSYVFILRAVLSLASKEEQLKAFGTCGSHICAILVFYTpvVLSSTMHRFARHVAPHVHILLA 254
                        250       260
                 ....*....|....*....|...
gi 302564612 281 LVYTFVTPLLNPLIYTLRNKDVK 303
Cdd:cd15948  255 NFYLLFPPMMNPIVYGVKTKQIR 277
7tm_1 pfam00001
7 transmembrane receptor (rhodopsin family); This family contains, amongst other ...
45-295 9.20e-39

7 transmembrane receptor (rhodopsin family); This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GCPRs of the rhodopsin superfamily. All opsins bind a chromophore, such as 11-cis-retinal. The function of most opsins other than the photoisomerases is split into two steps: light absorption and G-protein activation. Photoisomerases, on the other hand, are not coupled to G-proteins - they are thought to generate and supply the chromophore that is used by visual opsins.


Pssm-ID: 459624 [Multi-domain]  Cd Length: 256  Bit Score: 137.43  E-value: 9.20e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612   45 GNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLML-SNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLAIMA 123
Cdd:pfam00001   1 GNLLVILVILRNKKLRTPTNIFLLNLAVADLLFSLLTLPFWLvYYLNHGDWPFGSALCKIVGALFVVNGYASILLLTAIS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  124 YDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLqltaLIFTLPFCGHRQEINHFLCDVPPVLRLACadihvHQAV 203
Cdd:pfam00001  81 IDRYLAIVHPLRYKRRRTPRRAKVLILVIWVLALLLSL----PPLLFGWTLTVPEGNVTVCFIDFPEDLSK-----PVSY 151
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  204 LYVVGILVLTIPFLLICVSYVFITCAILCIRSAEGR-------RRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDED 276
Cdd:pfam00001 152 TLLISVLGFLLPLLVILVCYTLIIRTLRKSASKQKSsertqrrRKALKTLAVVVVVFILCWLPYHIVNLLDSLALDCELS 231
                         250       260
                  ....*....|....*....|....*
gi 302564612  277 R------QIALVYTFVTPLLNPLIY 295
Cdd:pfam00001 232 RlldkalSVTLWLAYVNSCLNPIIY 256
7tmA_OR52W-like cd15956
olfactory receptor subfamily 52W and related proteins, member of the class A family of ...
43-302 2.61e-36

olfactory receptor subfamily 52W and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52W and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320622 [Multi-domain]  Cd Length: 275  Bit Score: 131.52  E-value: 2.61e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  43 LCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLAIM 122
Cdd:cd15956   15 LLGNGVLLSVVWKEHRLHQPMFLFLAMLAATDLVLALSTAPKLLAILWFGATAISSYVCLSQMFLVHAFSAMESGVLVAM 94
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 123 AYDRYVAICHPLHYTLIMTRKLCAQ--MLVGALGLALFLSLQLtaLIFTLPFCGHRQeINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15956   95 ALDRFVAICNPLHYATILTLEVVAKagLLLALRGVAIVIPFPL--LVCRLSFCASHT-IAHTYCEHMAVVKLACGATTVD 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 201 QAVLYVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLLQY--GCCSLVYLRPRSSTSEDEDRQ 278
Cdd:cd15956  172 SLYGLALALFIGGGDVLFIAYSYGLIVKTVLRLPSPEARGKAFSTCSAHICVILFFYipGLLSVLMHRFGHSVPSAAHVL 251
                        250       260
                 ....*....|....*....|....
gi 302564612 279 IALVYTFVTPLLNPLIYTLRNKDV 302
Cdd:cd15956  252 LSNLYLLLPPALNPIVYGIRTKQI 275
7tmA_OR52N-like cd15954
olfactory receptor subfamily 52N and related proteins, member of the class A family of ...
43-302 1.09e-35

olfactory receptor subfamily 52N and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52N and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320620  Cd Length: 276  Bit Score: 129.94  E-value: 1.09e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  43 LCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLAIM 122
Cdd:cd15954   15 MVGNCGLLYLIWIEEALHRPMYYFLSMLSFTDITLCTTMVPKAMCIFWFNLKEISFNACLVQMFFVHTFTGMESGVLMLM 94
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 123 AYDRYVAICHPLHYTLIMTRKlcaqmLVGALGLALFLSLQLTALIFTL----PFCGHRQEINHFLCDVPPVLRLACADIH 198
Cdd:cd15954   95 ALDRYVAICYPLRYATILTNP-----VITKAGLATFLRGVMLIIPFPLltkrLPYCRGNFIPHTYCDHMSVVKLACANIR 169
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 199 VHQAVLYVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQ 278
Cdd:cd15954  170 VDAIYGLMVALLIGGFDILCISVSYAMILRAVVSLSSKEARSKAFSTCTAHICAIVITYTPAFFTFFAHRFGGHHITPHI 249
                        250       260
                 ....*....|....*....|....*..
gi 302564612 279 ---IALVYTFVTPLLNPLIYTLRNKDV 302
Cdd:cd15954  250 hiiMANLYLLLPPMMNPIVYGVKTKQI 276
7tmA_OR52M-like cd15949
olfactory receptor subfamily 52M and related proteins, member of the class A family of ...
41-303 7.09e-34

olfactory receptor subfamily 52M and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52M and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320615  Cd Length: 292  Bit Score: 125.66  E-value: 7.09e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  41 MILCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLA 120
Cdd:cd15949   29 IAVLGNCTILFIIKSEPSLHQPMYFFLSMLAIIDLVLSTSTMPKLLAIFWFSSNEIPLHACLLQMFLIHSFSAIESGIFL 108
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 121 IMAYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCgHRQEINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15949  109 AMAFDRYVAICNPLRHKTILTNTTVIRIGLAAVIRGVLYISPLPLLVRRLPWY-RTNIIAHSYCEHMAVVGLACGDVSIN 187
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 201 QAVLYVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLLQY---GCCSLVYlRPRSSTSEDEDR 277
Cdd:cd15949  188 NHYGLTIGFLVLIMDSLFIVLSYIMILRVVQRLATSEARLKTFGTCVSHVCAILAFYvpiAVSSLIH-RFGQNVPPPTHI 266
                        250       260
                 ....*....|....*....|....*.
gi 302564612 278 QIALVYTFVTPLLNPLIYTLRNKDVK 303
Cdd:cd15949  267 LLANFYLLIPPMLNPIVYGVRTKQIQ 292
7tmA_OR52A-like cd15955
olfactory receptor subfamily 52A and related proteins, member of the class A family of ...
45-302 1.20e-30

olfactory receptor subfamily 52A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52A and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320621 [Multi-domain]  Cd Length: 276  Bit Score: 116.79  E-value: 1.20e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  45 GNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLAIMAY 124
Cdd:cd15955   17 GNCTLLIVIKRERSLHQPMYIFLAMLAATDLGLCPCILPKMLAIFWFQLREISFNACLAQMFFIHTLQAFESGILLAMAL 96
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 125 DRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGHRQEINHFLCDVPPVLRLACADIHVHQAVL 204
Cdd:cd15955   97 DRYVAICHPLRHSSILTPQVLLGIGVLVVVRAVVLIIPCPLLIKLRLHHFRSTVISHSYCEHMAVVKLAADDVRVNKIYG 176
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 205 YVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIAL--V 282
Cdd:cd15955  177 LFVAFSILGFDIIFITTSYALIFRAVFRLPQKEARLKAFNTCTAHIFVFLLFYTLAFFSFFAHRFGHHVAPYVHILLsnL 256
                        250       260
                 ....*....|....*....|
gi 302564612 283 YTFVTPLLNPLIYTLRNKDV 302
Cdd:cd15955  257 YLLVPPVLNPIVYGVKTKQI 276
7tm_classA_rhodopsin-like cd00637
rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor ...
42-299 4.69e-24

rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor superfamily; Class A rhodopsin-like receptors constitute about 90% of all GPCRs. The class A GPCRs include the light-sensitive rhodopsin as well as receptors for biogenic amines, lipids, nucleotides, odorants, peptide hormones, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes. Based on sequence similarity, GPCRs can be divided into six major classes: class A (rhodopsin-like family), class B (Methuselah-like, adhesion and secretin-like receptor family), class C (metabotropic glutamate receptor family), class D (fungal mating pheromone receptors), class E (cAMP receptor family), and class F (frizzled/smoothened receptor family). Nearly 800 human GPCR genes have been identified and are involved essentially in all major physiological processes. Approximately 40% of clinically marketed drugs mediate their effects through modulation of GPCR function for the treatment of a variety of human diseases including bacterial infections.


Pssm-ID: 410626 [Multi-domain]  Cd Length: 275  Bit Score: 98.90  E-value: 4.69e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  42 ILCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLAI 121
Cdd:cd00637   12 GLVGNLLVILVILRNRRLRTVTNYFILNLAVADLLVGLLVIPFSLVSLLLGRWWFGDALCKLLGFLQSVSLLASILTLTA 91
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 122 MAYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLqltaliftLPFCGHRQEINHFLCDVPPVlrlaCADIHVHQ 201
Cdd:cd00637   92 ISVDRYLAIVHPLRYRRRFTRRRAKLLIALIWLLSLLLAL--------PPLLGWGVYDYGGYCCCCLC----WPDLTLSK 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 202 AVLYVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTCSSH----------LTVVLLQYGCC--------SLV 263
Cdd:cd00637  160 AYTIFLFVLLFLLPLLVIIVCYVRIFRKLRRHRRRIRSSSSNSSRRRRrrrerkvtktLLIVVVVFLLCwlpyfillLLD 239
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 302564612 264 YLRPRSSTSEDEDRQIALVYTFVTPLLNPLIYTLRN 299
Cdd:cd00637  240 VFGPDPSPLPRILYFLALLLAYLNSAINPIIYAFFN 275
7tmA_amine_R-like cd14967
amine receptors and similar proteins, member of the class A family of seven-transmembrane G ...
41-306 6.76e-15

amine receptors and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; Amine receptors of the class A family of GPCRs include adrenoceptors, 5-HT (serotonin) receptors, muscarinic cholinergic receptors, dopamine receptors, histamine receptors, and trace amine receptors. The receptors of amine subfamily are major therapeutic targets for the treatment of neurological disorders and psychiatric diseases. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320098 [Multi-domain]  Cd Length: 259  Bit Score: 72.98  E-value: 6.76e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  41 MILCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLA 120
Cdd:cd14967   12 VTVFGNLLVILAVYRNRRLRTVTNYFIVSLAVADLLVALLVMPFSAVYTLLGYWPFGPVLCRFWIALDVLCCTASILNLC 91
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 121 IMAYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLqltaliftLPFCGHRQEINHFLCDVppvlrlaCADIHVH 200
Cdd:cd14967   92 AISLDRYLAITRPLRYRQLMTKKRALIMIAAVWVYSLLISL--------PPLVGWRDETQPSVVDC-------ECEFTPN 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 201 QAVLYVVGILVLTIPFLLICVSYVFitcaILCIRSAEgrRRAFSTcsshLTVVLLQYGCC----SLVYLRprsSTSEDED 276
Cdd:cd14967  157 KIYVLVSSVISFFIPLLIMIVLYAR----IFRVARRE--LKAAKT----LAIIVGAFLLCwlpfFIIYLV---SAFCPPD 223
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 302564612 277 RQIALVYTFVTPL------LNPLIYTLRNKDVKDAL 306
Cdd:cd14967  224 CVPPILYAVFFWLgylnsaLNPIIYALFNRDFRRAF 259
7tmA_Opsins_type2_animals cd14969
type 2 opsins in animals, member of the class A family of seven-transmembrane G ...
43-306 6.57e-10

type 2 opsins in animals, member of the class A family of seven-transmembrane G protein-coupled receptors; This rhodopsin family represents the type 2 opsins found in vertebrates and invertebrates except sponge. Type 2 opsins primarily function as G protein coupled receptors and are responsible for vision as well as for circadian rhythm and pigment regulation. On the contrary, type 1 opsins such as bacteriorhodopsin and proteorhodopsin are found in both prokaryotic and eukaryotic microbes, functioning as light-gated ion channels, proton pumps, sensory receptors and in other unknown functions. Although these two opsin types share seven-transmembrane domain topology and a conserved lysine reside in the seventh helix, type 1 opsins do not activate G-proteins and are not evolutionarily related to type 2. Type 2 opsins can be classified into six distinct subfamilies including the vertebrate opsins/encephalopsins, the G(o) opsins, the G(s) opsins, the invertebrate G(q) opsins, the photoisomerases, and the neuropsins.


Pssm-ID: 381741 [Multi-domain]  Cd Length: 284  Bit Score: 58.76  E-value: 6.57e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  43 LCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLAIM 122
Cdd:cd14969   15 VVLNGLVIIVFLKKKKLRTPLNLFLLNLALADLLMSVVGYPLSFYSNLSGRWSFGDPGCVIYGFAVTFLGLVSISTLAAL 94
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 123 AYDRYVAICHPLHYTLIMTRKLCAqMLVGALGLALFLSlqltalifTLPFCGhrqeINHFlcdVPPVLRLACA---DIHV 199
Cdd:cd14969   95 AFERYLVIVRPLKAFRLSKRRALI-LIAFIWLYGLFWA--------LPPLFG----WSSY---VPEGGGTSCSvdwYSKD 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 200 HQAVLYVVGILVLT--IPFLLICVSYVFITCAI-------LCIRSAEGRRRAFSTCSSHLTVVLLQ----------YGCC 260
Cdd:cd14969  159 PNSLSYIVSLFVFCffLPLAIIIFCYYKIYRTLrkmskraARRKNSAITKRTKKAEKKVAKMVLVMivafliawtpYAVV 238
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|...
gi 302564612 261 SLVylrprssTSEDEDRQIALVYTFVTPLL-------NPLIYTLRNKDVKDAL 306
Cdd:cd14969  239 SLY-------VSFGGESTIPPLLATIPALFaksstiyNPIIYVFMNKQFRRAL 284
7tmA_CCKR-like cd14993
cholecystokinin receptors and related proteins, member of the class A family of ...
43-300 1.89e-09

cholecystokinin receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents four G-protein coupled receptors that are members of the RFamide receptor family, including cholecystokinin receptors (CCK-AR and CCK-BR), orexin receptors (OXR), neuropeptide FF receptors (NPFFR), and pyroglutamylated RFamide peptide receptor (QRFPR). These RFamide receptors are activated by their endogenous peptide ligands that share a common C-terminal arginine (R) and an amidated phenylanine (F) motif. CCK-AR (type A, alimentary; also known as CCK1R) is found abundantly on pancreatic acinar cells and binds only sulfated CCK-peptides with very high affinity, whereas CCK-BR (type B, brain; also known as CCK2R), the predominant form in the brain and stomach, binds CCK or gastrin and discriminates poorly between sulfated and non-sulfated peptides. CCK is implicated in regulation of digestion, appetite control, and body weight, and is involved in neurogenesis via CCK-AR. There is some evidence to support that CCK and gastrin, via their receptors, are involved in promoting cancer development and progression, acting as growth and invasion factors. Orexins (OXs; also referred to as hypocretins) are neuropeptide hormones that regulate the sleep-wake cycle and potently influence homeostatic systems regulating appetite and feeding behavior or modulating emotional responses such as anxiety or panic. OXs are synthesized as prepro-orexin (PPO) in the hypothalamus and then proteolytically cleaved into two forms of isoforms: orexin-A (OX-A) and orexin-B (OX-B). OXA is a 33 amino-acid peptide with N-terminal pyroglutamyl residue and two intramolecular disulfide bonds, whereas OXB is a 28 amino-acid linear peptide with no disulfide bonds. OX-A binds orexin receptor 1 (OX1R) with high-affinity, but also binds with somewhat low-affinity to OX2R, and signals primarily to Gq coupling, whereas OX-B shows a strong preference for the orexin receptor 2 (OX2R) and signals through Gq or Gi/o coupling. The 26RFa, also known as QRFP (Pyroglutamylated RFamide peptide), is a 26-amino acid residue peptide that exerts similar orexigenic activity including the regulation of feeding behavior in mammals. It is the ligand for G-protein coupled receptor 103 (GPR103), which is predominantly expressed in paraventricular (PVN) and ventromedial (VMH) nuclei of the hypothalamus. GPR103 shares significant protein sequence homology with orexin receptors (OX1R and OX2R), which have recently shown to produce a neuroprotective effect in Alzheimer's disease by forming a functional heterodimer with GPR103. Neuropeptide FF (NPFF) is a mammalian octapeptide that has been implicated in a wide range of physiological functions in the brain including pain sensitivity, insulin release, food intake, memory, blood pressure, and opioid-induced tolerance and hyperalgesia. The effects of NPFF are mediated through neuropeptide FF1 and FF2 receptors (NPFF1-R and NPFF2-R) which are predominantly expressed in the brain. NPFF induces pro-nociceptive effects, mainly through the NPFF1-R, and anti-nociceptive effects, mainly through the NPFF2-R.


Pssm-ID: 320124 [Multi-domain]  Cd Length: 296  Bit Score: 57.61  E-value: 1.89e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  43 LCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLAIM 122
Cdd:cd14993   15 LVGNSLVIAVVLRNKHMRTVTNYFLVNLAVADLLVSLFCMPLTLLENVYRPWVFGEVLCKAVPYLQGVSVSASVLTLVAI 94
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 123 AYDRYVAICHPLHYTLIMTRKLCAQMLVGalglalflsLQLTALIFTLPFCGHRQEINHFLCDVPPVLRLACADIHVHQA 202
Cdd:cd14993   95 SIDRYLAICYPLKARRVSTKRRARIIIVA---------IWVIAIIIMLPLLVVYELEEIISSEPGTITIYICTEDWPSPE 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 203 V--LYVVGILVL--TIPFLLICVSYVFITCAiLCIRSAEGRRRAFSTCSSH------------LTVVLLQYGCCSL---- 262
Cdd:cd14993  166 LrkAYNVALFVVlyVLPLLIISVAYSLIGRR-LWRRKPPGDRGSANSTSSRrilrskkkvarmLIVVVVLFALSWLpyyv 244
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*.
gi 302564612 263 --VYLRPRSSTSEDEDRQIALVYTFVTPL------LNPLIYTLRNK 300
Cdd:cd14993  245 lsILLDFGPLSSEESDENFLLILPFAQLLgysnsaINPIIYCFMSK 290
7tmA_EDG-like cd14972
endothelial differentiation gene family, member of the class A family of seven-transmembrane G ...
59-306 2.69e-09

endothelial differentiation gene family, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents the endothelial differentiation gene (Edg) family of G-protein coupled receptors, melanocortin/ACTH receptors, and cannabinoid receptors as well as their closely related receptors. The Edg GPCRs bind blood borne lysophospholipids including sphingosine-1-phosphate (S1P) and lysophosphatidic acid (LPA), which are involved in the regulation of cell proliferation, survival, migration, invasion, endothelial cell shape change and cytoskeletal remodeling. The Edg receptors are classified into two subfamilies: the lysophosphatidic acid subfamily that includes LPA1 (Edg2), LPA2 (Edg4), and LPA3 (Edg7); and the S1P subfamily that includes S1P1 (Edg1), S1P2 (Edg5), S1P3 (Edg3), S1P4 (Edg6), and S1P5 (Edg8). Melanocortin receptors bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. Two types of cannabinoid receptors, CB1 and CB2, are activated by naturally occurring endocannabinoids, cannabis plant-derived cannabinoids such as tetrahydrocannabinol, or synthetic cannabinoids. The CB receptors are involved in the various physiological processes such as appetite, mood, memory, and pain sensation. CB1 receptor is expressed predominantly in central and peripheral neurons, while CB2 receptor is found mainly in the immune system.


Pssm-ID: 341317 [Multi-domain]  Cd Length: 275  Bit Score: 56.92  E-value: 2.69e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  59 LRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLAImAYDRYVAICHPLHYTL 138
Cdd:cd14972   29 LHKPMYILIANLAAADLLAGIAFVFTFLSVLLVSLTPSPATWLLRKGSLVLSLLASAYSLLAI-AVDRYISIVHGLTYVN 107
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 139 IMTRKLCAqmlvgalgLALFLSLQLTALIFTLPFCGHrqeiNHFLCDVPpvlrlACADIHVHQAVLYVVGILV-LTIPFL 217
Cdd:cd14972  108 NVTNKRVK--------VLIALVWVWSVLLALLPVLGW----NCVLCDQE-----SCSPLGPGLPKSYLVLILVfFFIALV 170
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 218 LICVSYVFItCAILCIRSAEGRRRAFSTCSSH----------LTVVLLQYGCC---SLVYLRPRSSTSEDEDRQIALVYT 284
Cdd:cd14972  171 IIVFLYVRI-FWCLWRHANAIAARQEAAVPAQpstsrklaktVVIVLGVFLVCwlpLLILLVLDVLCPSVCDIQAVFYYF 249
                        250       260
                 ....*....|....*....|....*.
gi 302564612 285 FVTPLLN----PLIYTLRNKDVKDAL 306
Cdd:cd14972  250 LVLALLNsainPIIYAFRLKEMRRAV 275
7tmA_PrRP_R cd15394
prolactin-releasing peptide receptor, member of the class A family of seven-transmembrane G ...
45-228 3.92e-09

prolactin-releasing peptide receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Prolactin-releasing peptide (PrRP) receptor (previously known as GPR10) is expressed in the central nervous system with the highest levels located in the anterior pituitary and is activated by its endogenous ligand PrRP, a neuropeptide possessing a C-terminal Arg-Phe-amide motif. There are two active isoforms of PrRP in mammals: one consists of 20 amino acids (PrRP-20) and the other consists of 31 amino acids (PrRP-31), where PrRP-20 is a C-terminal fragment of PrRP-31. Binding of PrRP to the receptor coupled to G(i/o) proteins activates the extracellular signal-related kinase (ERK) and it can also couple to G(q) protein leading to an increase in intracellular calcium and activation of c-Jun N-terminal protein kinase (JNK). The PrRP receptor shares significant sequence homology with the neuropeptide Y (NPY) receptor, and micromolar levels of NPY can bind and completely inhibit the PrRP-evoked intracellular calcium response in PrRP receptor-expressing cells, suggesting that the PrRP receptor shares a common ancestor with the NPY receptors. PrRP has been shown to reduce food intake and body weight and modify body temperature when administered in rats. It also has been shown to decrease circulating growth hormone levels by activating somatostatin-secreting neurons in the hypothalamic periventricular nucleus.


Pssm-ID: 320516 [Multi-domain]  Cd Length: 286  Bit Score: 56.67  E-value: 3.92e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  45 GNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISlagcGAQMFFFVTLGST-----DCFLL 119
Cdd:cd15394   17 GNYLLIYVICRTKKMHNVTNFLIGNLAFSDMLMCATCVPLTLAYAFEPRGWVF----GRFMCYFVFLMQPvtvyvSVFTL 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 120 AIMAYDRYVAICHPLHYTliMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGHRQEInhflcdvppvlrlaCADIHV 199
Cdd:cd15394   93 TAIAVDRYYVTVYPLRRR--ISRRTCAYIVAAIWLLSCGLALPAAAHTYYVEFKGLDFSI--------------CEEFWF 156
                        170       180       190
                 ....*....|....*....|....*....|....
gi 302564612 200 HQA---VLYVVGILVLT--IPFLLICVSYVFITC 228
Cdd:cd15394  157 GQEkqrLAYACSTLLITyvLPLLAISLSYLRISV 190
7tmA_SREB-like cd15005
super conserved receptor expressed in brain and related proteins, member of the class A family ...
43-161 1.19e-07

super conserved receptor expressed in brain and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; The SREB (super conserved receptor expressed in brain) subfamily consists of at least three members, named SREB1 (GPR27), SREB2 (GPR85), and SREB3 (GPR173). They are very highly conserved G protein-coupled receptors throughout vertebrate evolution, however no endogenous ligands have yet been identified. SREB2 is greatly expressed in brain regions involved in psychiatric disorders and cognition, such as the hippocampal dentate gyrus. Genetic studies in both humans and mice have shown that SREB2 influences brain size and negatively regulates hippocampal adult neurogenesis and neurogenesis-dependent cognitive function, all of which are suggesting a potential link between SREB2 and schizophrenia. All three SREB genes are highly expressed in differentiated hippocampal neural stem cells. Furthermore, all GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320134 [Multi-domain]  Cd Length: 329  Bit Score: 52.46  E-value: 1.19e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  43 LCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVP-LMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLAI 121
Cdd:cd15005   15 LAGNLLFSVLIVRDRSLHRAPYYFLLDLCLADGLRSLACFPfVMASVRHGSGWIYGALSCKVIAFLAVLFCFHSAFTLFC 94
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|
gi 302564612 122 MAYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSL 161
Cdd:cd15005   95 IAVTRYMAIAHHRFYAKRMTFWTCLAVICMAWTLSVAMAF 134
7tmA_Vasopressin_Oxytocin cd15196
vasopressin and oxytocin receptors, member of the class A family of seven-transmembrane G ...
41-222 1.23e-07

vasopressin and oxytocin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Vasopressin (also known as arginine vasopressin or anti-diuretic hormone) and oxytocin are synthesized in the hypothalamus and are released from the posterior pituitary gland. The actions of vasopressin are mediated by the interaction of this hormone with three receptor subtypes: V1aR, V1bR, and V2R. These subtypes are differ in localization, function, and signaling pathways. Activation of V1aR and V1bR stimulate phospholipase C, while activation of V2R stimulates adenylate cyclase. Although vasopressin and oxytocin differ only by two amino acids and stimulate the same cAMP/PKA pathway, they have divergent physiological functions. Vasopressin is involved in regulating blood pressure and the balance of water and sodium ions, whereas oxytocin plays an important role in the uterus during childbirth and in lactation.


Pssm-ID: 320324 [Multi-domain]  Cd Length: 264  Bit Score: 51.85  E-value: 1.23e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  41 MILCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEIcyTTA---VVPLMLSNI-FGAQKTISLagCGAQMFF--FVTLGST 114
Cdd:cd15196   13 LALFGNSCVLLVLYRRRRKLSRMHLFILHLSVADL--LVAlfnVLPQLIWDItYRFYGGDLL--CRLVKYLqvVGMYASS 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 115 dcFLLAIMAYDRYVAICHPLHYtLIMTRKLCAQMLVGALGLALFLSL-QLtaLIFTLPFCGHRQeinhFLC----DVPPV 189
Cdd:cd15196   89 --YVLVATAIDRYIAICHPLSS-HRWTSRRVHLMVAIAWVLSLLLSIpQL--FIFSYQEVGSGV----YDCwatfEPPWG 159
                        170       180       190
                 ....*....|....*....|....*....|...
gi 302564612 190 LRLACADIHVhqaVLYVVGILVLTIPFLLICVS 222
Cdd:cd15196  160 LRAYITWFTV---AVFVVPLIILAFCYGRICYV 189
7tmA_NTSR-like cd14979
neurotensin receptors and related G protein-coupled receptors, member of the class A family of ...
45-219 4.01e-07

neurotensin receptors and related G protein-coupled receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes the neurotensin receptors and related G-protein coupled receptors, including neuromedin U receptors, growth hormone secretagogue receptor, motilin receptor, the putative GPR39 and the capa receptors from insects. These receptors all bind peptide hormones with diverse physiological effects. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320110 [Multi-domain]  Cd Length: 300  Bit Score: 50.82  E-value: 4.01e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  45 GNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPL-MLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLAIMA 123
Cdd:cd14979   17 GNLLTCIVIARHKSLRTTTNYYLFSLAVSDLLILLVGLPVeLYNFWWQYPWAFGDGGCKLYYFLFEACTYATVLTIVALS 96
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 124 YDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFT--LPFCGHRQEINHFLCDVPPVLRLACADIHVHQ 201
Cdd:cd14979   97 VERYVAICHPLKAKTLVTKRRVKRFILAIWLVSILCAIPILFLMGIqyLNGPLPGPVPDSAVCTLVVDRSTFKYVFQVST 176
                        170
                 ....*....|....*...
gi 302564612 202 AVLYVVGILVLTIPFLLI 219
Cdd:cd14979  177 FIFFVLPMFVISILYFRI 194
7tmA_Opioid_R-like cd14970
opioid receptors and related proteins, member of the class A family of seven-transmembrane G ...
43-295 5.01e-07

opioid receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes opioid receptors, somatostatin receptors, melanin-concentrating hormone receptors (MCHRs), and neuropeptides B/W receptors. Together they constitute the opioid receptor-like family, members of the class A G-protein coupled receptors. Opioid receptors are coupled to inhibitory G proteins of the G(i/o) family and are involved in regulating a variety of physiological functions such as pain, addiction, mood, stress, epileptic seizure, and obesity, among many others. G protein-coupled somatostatin receptors (SSTRs), which display strong sequence similarity with opioid receptors, binds somatostatin (somatotropin release inhibiting factor), a polypeptide hormone that regulates a wide variety of physiological functions such as neurotransmission, cell proliferation, contractility of smooth muscle cells, and endocrine signaling as well as inhibition of the release of many secondary hormones. MCHR binds melanin concentrating hormone and is presumably involved in the neuronal regulation of food intake. Despite strong homology with somatostatin receptors, MCHR does not appear to bind somatostatin. Neuropeptides B/W receptors are primarily expressed in the CNS and stimulate the cortisol secretion by activating the adenylate cyclase- and the phospholipase C-dependent signaling pathways.


Pssm-ID: 320101 [Multi-domain]  Cd Length: 282  Bit Score: 50.37  E-value: 5.01e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  43 LCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTaVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLAIM 122
Cdd:cd14970   15 LTGNSLVIYVILRYSKMKTVTNIYILNLAVADELFLL-GLPFLATSYLLGYWPFGEVMCKIVLSVDAYNMFTSIFCLTVM 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 123 AYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGHRQEINhflcdvppvLRLACADIHVHQA 202
Cdd:cd14970   94 SVDRYLAVVHPVKSLRFRTPRKAKLVSLCVWALSLVLGLPVIIFARTLQEEGGTISCN---------LQWPDPPDYWGRV 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 203 VLYVVGILVLTIPFLLICVSYVFItcaILCIRS--------AEGRRRAFSTCSSHLTVVLLQYGCCSL---VYLRPRSST 271
Cdd:cd14970  165 FTIYTFVLGFAVPLLVITVCYSLI---IRRLRSsrnlstsgAREKRRARRKVTRLVLVVVAVFVVCWLpfhVFQIVRLLI 241
                        250       260       270
                 ....*....|....*....|....*....|
gi 302564612 272 SEDEDRQIALVYTFVTPL------LNPLIY 295
Cdd:cd14970  242 DPPETLTVVGVFLFCIALsyanscLNPILY 271
7tmA_ETH-R cd14997
ecdysis-triggering hormone receptors, member of the class A family of seven-transmembrane G ...
45-226 5.14e-07

ecdysis-triggering hormone receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup represents the ecdysis-triggering hormone receptors found in insects, which are members of the class A family of seven-transmembrane G-protein coupled receptors. Ecdysis-triggering hormones are vital regulatory signals that govern the stereotypic physiological sequence leading to cuticle shedding in insects. Thus, the ETH signaling system has been a target for the design of more sophisticated insect-selective pest control strategies. Two subtypes of ecdysis-triggering hormone receptor were identified in Drosophila melanogaster. Blood-borne ecdysis-triggering hormone (ETH) activates the behavioral sequence through direct actions on the central nervous system. In insects, ecdysis is thought to be controlled by the interaction between peptide hormones; in particular between ecdysis-triggering hormone (ETH) from the periphery and eclosion hormone (EH) and crustacean cardioactive peptide (CCAP) from the central nervous system. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320128 [Multi-domain]  Cd Length: 294  Bit Score: 50.37  E-value: 5.14e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  45 GNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFgAQKTISLAGCGAQMFFFVTLGSTDCFLLAIMA- 123
Cdd:cd14997   17 GNVLVGIVVWKNKDMRTPTNIFLVNLSVADLLVLLVCMPVALVETW-AREPWLLGEFMCKLVPFVELTVAHASVLTILAi 95
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 124 -YDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLpfcghrqEINHFLCDVPPVLRlacADIHVHQA 202
Cdd:cd14997   96 sFERYYAICHPLQAKYVCTKRRALVIIALIWLLALLTSSPVLFITEFK-------EEDFNDGTPVAVCR---TPADTFWK 165
                        170       180
                 ....*....|....*....|....*.
gi 302564612 203 VLYVVGILVL--TIPFLLICVSYVFI 226
Cdd:cd14997  166 VAYILSTIVVffVVPLAILSGLYSVI 191
7tmA_GPR119_R_insulinotropic_receptor cd15104
G protein-coupled receptor 119, also called glucose-dependent insulinotropic receptor, member ...
41-306 6.87e-07

G protein-coupled receptor 119, also called glucose-dependent insulinotropic receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR119 is activated by oleoylethanolamide (OEA), a naturally occurring bioactive lipid with hypophagic and anti-obesity effects. Immunohistochemistry and double-immunofluorescence studies revealed the predominant GPR119 localization in pancreatic polypeptide (PP)-cells of islets. In addition, GPR119 expression is elevated in islets of obese hyperglycemic mice as compared to control islets, suggesting a possible involvement of this receptor in the development of obesity and diabetes. GPR119 has a significant sequence similarity with the members of the endothelial differentiation gene family. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320232 [Multi-domain]  Cd Length: 283  Bit Score: 49.68  E-value: 6.87e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  41 MILCGNTAIIWVV--CTRSTlRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFL 118
Cdd:cd15104   12 LIITGNLLVIVALlkLIRKK-DTKSNCFLLNLAIADFLVGLAIPGLATDELLSDGENTQKVLCLLRMCFVITSCAASVLS 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 119 LAIMAYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFL-SLQLTALIFtlpfcghRQEINHFLCDVppvlrlacadi 197
Cdd:cd15104   91 LAAIAFDRYLALKQPLRYKQIMTGKSAGALIAGLWLYSGLIgFLPLISPQF-------QQTSYKGKCSF----------- 152
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 198 hvHQAVLYVVGILVLTIPFLLICVSYVFITCAILCIRSAE--------------GRRRAFSTCSSHLTVVLLQYGC---- 259
Cdd:cd15104  153 --FAAFHPRVLLVLSCMVFFPALLLFVFCYCDILKIARVHsraiykvehalarqIHPRRTLSDFKAARTVAVLIGCflls 230
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|...
gi 302564612 260 ------CSLVYLRPRSSTSEDEDRQIALVYTFVTPLLNPLIYTLRNKDVKDAL 306
Cdd:cd15104  231 wlpfqiTGLVQALCDECKLYDVLEDYLWLLGLCNSLLNPWIYAFWQKEVRRAL 283
7tmA_Adenosine_R_A2B cd15069
adenosine receptor subtype 2AB, member of the class A family of seven-transmembrane G ...
45-157 9.49e-07

adenosine receptor subtype 2AB, member of the class A family of seven-transmembrane G protein-coupled receptors; The A2B receptor, a member of the adenosine receptor family of G protein-coupled receptors, binds adenosine as its endogenous ligand and is involved in regulating myocardial oxygen consumption and coronary blood flow. High-affinity A2A and low-affinity A2B receptors are preferentially coupled to G proteins of the stimulatory (Gs) family, which lead to activation of adenylate cyclase and thereby increasing the intracellular cAMP levels. The A2A receptor activation protects against tissue injury and acts as anti-inflammatory agent. In human skin endothelial cells, activation of A2B receptor, but not the A2A receptor, promotes angiogenesis. Alternatively, activated A2A receptor, but not the A2B receptor, promotes angiogenesis in human umbilical vein and lung microvascular endothelial cells. The A2A receptor alters cardiac contractility indirectly by modulating the anti-adrenergic effect of A1 receptor, while the A2B receptor exerts direct effects on cardiac contractile function, but does not modulate beta-adrenergic or A1 anti-adrenergic effects.


Pssm-ID: 320197 [Multi-domain]  Cd Length: 294  Bit Score: 49.55  E-value: 9.49e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  45 GNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQktISLAGCGAQMFFFVTLGSTDCFLLAIMAY 124
Cdd:cd15069   17 GNVLVCAAVGTNSTLQTPTNYFLVSLAAADVAVGLFAIPFAITISLGFC--TDFHSCLFLACFVLVLTQSSIFSLLAVAV 94
                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 302564612 125 DRYVAICHPLHYTLIMT----RKLCAQMLVGALGLAL 157
Cdd:cd15069   95 DRYLAIKVPLRYKSLVTgkraRGVIAVLWVLAFGIGL 131
7tmA_Melanopsin-like cd15083
vertebrate melanopsins and related opsins, member of the class A family of seven-transmembrane ...
43-230 1.33e-06

vertebrate melanopsins and related opsins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represent the Gq-coupled rhodopsin subfamily consists of melanopsins, insect photoreceptors R1-R6, invertebrate Gq opsins as well as their closely related opsins. Melanopsins (also called Opsin-4) are the primary photoreceptor molecules for non-visual functions such as the photo-entrainment of the circadian rhythm and pupillary constriction in mammals. Mammalian melanopsins are expressed only in the inner retina, whereas non-mammalian vertebrate melanopsins are localized in various extra-retinal tissues such as iris, brain, pineal gland, and skin. The outer photoreceptors (R1-R6) are the insect Drosophila equivalent to the vertebrate rods and are responsible for image formation and motion detection. The invertebrate G(q) opsins includes the arthropod and mollusk visual opsins as well as invertebrate melanopsins, which are also found in vertebrates. Arthropods possess color vision by the use of multiple opsins sensitive to different light wavelengths. Members of this subfamily belong to the class A of the G protein-coupled receptors and have seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320211 [Multi-domain]  Cd Length: 291  Bit Score: 48.87  E-value: 1.33e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  43 LCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGC-----GAQMFFFVTLGStdcf 117
Cdd:cd15083   15 VVGNGLVIYAFCRFKSLRTPANYLIINLAISDFLMCILNCPLMVISSFSGRWIFGKTGCdmygfSGGLFGIMSINT---- 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 118 lLAIMAYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQltaliftlPFCGHrqeiNHFlcdVPPVLRLAC--- 194
Cdd:cd15083   91 -LAAIAVDRYLVITRPMKASVRISHRRALIVIAVVWLYSLLWVLP--------PLFGW----SRY---VLEGLLTSCsfd 154
                        170       180       190
                 ....*....|....*....|....*....|....*...
gi 302564612 195 --ADIHVHQAVLYVVGILVLTIPFLLICVSYVFITCAI 230
Cdd:cd15083  155 ylSRDDANRSYVICLLIFGFVLPLLIIIYCYSFIFRAV 192
7tmA_photoreceptors_insect cd15079
insect photoreceptors R1-R6 and similar proteins, member of the class A family of ...
43-242 1.75e-06

insect photoreceptors R1-R6 and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes the insect photoreceptors and their closely related proteins. The Drosophila eye is composed of about 800 unit eyes called ommatidia, each of which contains eight photoreceptor cells (R1-R8). The six outer photoreceptors (R1-R6) function like the vertebrate rods and are responsible for motion detection in dim light and image formation. The R1-R6 photoreceptors express a blue-absorbing pigment, Rhodopsin 1(Rh1). The inner photoreceptors (R7 and R8) are considered the equivalent of the color-sensitive vertebrate cone cells, which express a range of different pigments. The R7 photoreceptors express one of two different UV absorbing pigments, either Rh3 or Rh4. Likewise, the R8 photoreceptors express either the blue absorbing pigment Rh5 or green absorbing pigment Rh6. These photoreceptors belong the class A of the G protein-coupled receptors and possess seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320207 [Multi-domain]  Cd Length: 292  Bit Score: 48.73  E-value: 1.75e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  43 LCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICyTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLAIM 122
Cdd:cd15079   15 LLGNGLVIYIFSTTKSLRTPSNMLVVNLAISDFL-MMIKMPIFIYNSFYEGWALGPLGCQIYAFLGSLSGIGSIWTNAAI 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 123 AYDRYVAICHPLHYTLiMTRKLCAQMLVGALGLALFLSLqltaliftLPFCGhrqEINHFlcdVPPVLRLACA------D 196
Cdd:cd15079   94 AYDRYNVIVKPLNGNP-LTRGKALLLILFIWLYALPWAL--------LPLLF---GWGRY---VPEGFLTSCSfdyltrD 158
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*...
gi 302564612 197 IHvhqAVLYVVGILVLT--IPFLLICVSYVFITCAilcIRSAEGRRRA 242
Cdd:cd15079  159 WN---TRSFVATIFVFAyvIPLIIIIYCYSFIVKA---VFAHEKALRE 200
7tmA_Opsin5_neuropsin cd15074
neuropsin (Opsin-5), member of the class A family of seven-transmembrane G protein-coupled ...
43-249 1.77e-06

neuropsin (Opsin-5), member of the class A family of seven-transmembrane G protein-coupled receptors; Neuropsin, also known as Opsin-5, is a photoreceptor protein expressed in the retina, brain, testes, and spinal cord. Neuropsin belongs to the type 2 opsin family of the class A G-protein coupled receptors. Mammalian neuropsin activates Gi protein-mediated photo-transduction pathway in a UV-dependent manner, whereas, in non-mammalian vertebrates, neuropsin is involved in regulating the photoperiodic control of seasonal reproduction in birds such as quail. As with other opsins, it may also act as a retinal photoisomerase.


Pssm-ID: 320202 [Multi-domain]  Cd Length: 284  Bit Score: 48.43  E-value: 1.77e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  43 LCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLAIM 122
Cdd:cd15074   15 TLGNGTVLFVLYRRRSKLKPAELLTVNLAVSDLGISVFGYPLAIISAFAHRWLFGDIGCVFYGFCGFLFGCCSINTLTAI 94
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 123 AYDRYVAICHPLHYTLImTRKLCAQMLVGALGLALFLSlqltalifTLPFCG---HRQEINHFLCDVPPVLRLACADihv 199
Cdd:cd15074   95 SIYRYLKICHPPYGPKL-SRRHVCIVIVAIWLYALFWA--------VAPLVGwgsYGPEPFGTSCSIDWTGASASVG--- 162
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|
gi 302564612 200 HQAVLYVVGILVLTIPFLLICVSYVFItcaILCIRSAEGRRRAFSTCSSH 249
Cdd:cd15074  163 GMSYIISIFIFCYLLPVLIIVFSYVKI---IRKVKSSRKRVAGFDSRSKR 209
7tmA_FMRFamide_R-like cd14978
FMRFamide (Phe-Met-Arg-Phe) receptors and related proteins, member of the class A family of ...
43-244 2.13e-06

FMRFamide (Phe-Met-Arg-Phe) receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes Drosophila melanogaster G-protein coupled FMRFamide (Phe-Met-Arg-Phe-NH2) receptor DrmFMRFa-R and related invertebrate receptors, as well as the vertebrate proteins GPR139 and GPR142. DrmFMRFa-R binds with high affinity to FMRFamide and intrinsic FMRFamide-related peptides. FMRFamide is a neuropeptide from the family of FMRFamide-related peptides (FaRPs), which all containing a C-terminal RFamide (Arg-Phe-NH2) motif and have diverse functions in the central and peripheral nervous systems. FMRFamide is an important neuropeptide in many types of invertebrates such as insects, nematodes, molluscs, and worms. In invertebrates, the FMRFamide-related peptides are involved in the regulation of heart rate, blood pressure, gut motility, feeding behavior, and reproduction. On the other hand, in vertebrates such as mice, they play a role in the modulation of morphine-induced antinociception. Orphan receptors GPR139 and GPR142 are very closely related G protein-coupled receptors, but they have different expression patterns in the brain and in other tissues. These receptors couple to inhibitory G proteins and activate phospholipase C. Studies suggested that dimer formation may be required for their proper function. GPR142 is predominantly expressed in pancreatic beta-cells and mediates enhancement of glucose-stimulated insulin secretion, whereas GPR139 is mostly expressed in the brain and is suggested to play a role in the control of locomotor activity. Tryptophan and phenylalanine have been identified as putative endogenous ligands of GPR139.


Pssm-ID: 410630 [Multi-domain]  Cd Length: 299  Bit Score: 48.40  E-value: 2.13e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  43 LCGNTAIIWVVcTRSTLRTPMYFFLSNLSFLEICY-TTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLG----STDCF 117
Cdd:cd14978   15 IIGNILNLVVL-TRKSMRSSTNVYLAALAVSDILVlLSALPLFLLPYIADYSSSFLSYFYAYFLPYIYPLAntfqTASVW 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 118 LLAIMAYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQlTALIFTLPFCGHRQEINHFLCDVPPVLRLACADI 197
Cdd:cd14978   94 LTVALTVERYIAVCHPLKARTWCTPRRARRVILIIIIFSLLLNLP-RFFEYEVVECENCNNNSYYYVIPTLLRQNETYLL 172
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*...
gi 302564612 198 HVHqavLYVVGILVLTIPFLLIcvsyVFITCAILC-IRSAEGRRRAFS 244
Cdd:cd14978  173 KYY---FWLYAIFVVLLPFILL----LILNILLIRaLRKSKKRRRLLR 213
7tmA_GPR6 cd15962
G protein-coupled receptor 6, member of the class A family of seven-transmembrane G ...
41-306 4.06e-06

G protein-coupled receptor 6, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR3, GPR6, and GPR12 form a subfamily of constitutively active G-protein coupled receptors with dual coupling to G(s) and G(i) proteins. These three orphan receptors are involved in the regulation of cell proliferation and survival, neurite outgrowth, cell clustering, and maintenance of meiotic prophase arrest. They constitutively activate adenylate cyclase to a similar degree as that seen with fully activated G(s)-coupled receptors, and are also able to constitutively activate inhibitory G(i/o) proteins. Lysophospholipids such as sphingosine 1-phosphate (S1P) and sphingosylphosphorylcholine have been detected as the high-affinity ligands for Gpr6 and Gpr12, respectively, which show high sequence homology with GPR3.


Pssm-ID: 320628 [Multi-domain]  Cd Length: 268  Bit Score: 47.62  E-value: 4.06e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  41 MILCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEIcytTAVVPLMLSNIFG---AQKTISLAGCGaqmFFFVTLGSTDCF 117
Cdd:cd15962   13 VIACENAIVVAIIFYTPTLRTPMFVLIGSLATADL---LAGCGLILNFVFQyviQSETISLITVG---FLVASFTASVSS 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 118 LLAIMAyDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLqltaliftLPFCGHRQEINHFLCDVppVLRLACADI 197
Cdd:cd15962   87 LLAITV-DRYLSLYNALTYYSEKTVLGVHLMLAATWGVSLCLGL--------LPVLGWNCLEERASCSI--VRPLTKSNV 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 198 HVHQAVLYVVGILVLTIpfllicvsYVFItCAILCIRSAEGRRRAFSTCSSH----------LTVVLLQYGCCSLvylrP 267
Cdd:cd15962  156 TLLSASFFFIFILMLHL--------YIKI-CKIVCRHAHQIALQQHFLTASHyvatkkgvstLAIILGTFGASWL----P 222
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*.
gi 302564612 268 RSSTSEDEDRQIALVYTFVTPL-------LNPLIYTLRNKDVKDAL 306
Cdd:cd15962  223 FAIYCVVGDHEYPAVYTYATLLpatynsmINPIIYAYRNQEIQRSM 268
7tmA_Adenosine_R cd14968
adenosine receptor subfamily, member of the class A family of seven-transmembrane G ...
45-230 4.79e-06

adenosine receptor subfamily, member of the class A family of seven-transmembrane G protein-coupled receptors; The adenosine receptors (or P1 receptors), a family of G protein-coupled purinergic receptors, bind adenosine as their endogenous ligand. There are four types of adenosine receptors in human, designated as A1, A2A, A2B, and A3. Each type is encoded by a different gene and has distinct functions with some overlap. For example, both A1 and A2A receptors are involved in regulating myocardial oxygen consumption and coronary blood flow in the heart, while the A2A receptor also has a broad spectrum of anti-inflammatory effects in the body. These two receptors also expressed in the brain, where they have important roles in the release of other neurotransmitters such as dopamine and glutamate, while the A2B and A3 receptors found primarily in the periphery and play important roles in inflammation and immune responses. The A1 and A3 receptors preferentially interact with G proteins of the G(i/o) family, thereby lowering the intracellular cAMP levels, whereas the A2A and A2B receptors interact with G proteins of the G(s) family, activating adenylate cyclase to elevate cAMP levels.


Pssm-ID: 341316 [Multi-domain]  Cd Length: 285  Bit Score: 47.25  E-value: 4.79e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  45 GNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLsnIFGAQKTISLAGCGAQMFFFVTLGSTDCF-LLAImA 123
Cdd:cd14968   17 GNVLVIWAVKLNRALRTVTNYFIVSLAVADILVGALAIPLAI--LISLGLPTNFHGCLFMACLVLVLTQSSIFsLLAI-A 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 124 YDRYVAICHPLHYTLIMTRKlcaqmlvgALGLALFLSLQLTALIFTLPFCG-HRQEINHFLCDVPPVlrlACADIHVHQA 202
Cdd:cd14968   94 IDRYLAIKIPLRYKSLVTGR--------RAWGAIAVCWVLSFLVGLTPMFGwNNGAPLESGCGEGGI---QCLFEEVIPM 162
                        170       180       190
                 ....*....|....*....|....*....|
gi 302564612 203 VLYVVGILVLTI--PFLLICVSYVFITCAI 230
Cdd:cd14968  163 DYMVYFNFFACVlvPLLIMLVIYLRIFRVI 192
7tmA_D4_dopamine_R cd15308
D4 dopamine receptor of the D2-like family, member of the class A family of ...
41-136 1.02e-05

D4 dopamine receptor of the D2-like family, member of the class A family of seven-transmembrane G protein-coupled receptors; Dopamine receptors are members of the class A G protein-coupled receptors that are involved in many neurological processes in the central nervous system (CNS). The neurotransmitter dopamine is the primary endogenous agonist for dopamine receptors. Dopamine receptors consist of at least five subtypes: D1, D2, D3, D4, and D5. The D1 and D5 subtypes are members of the D1-like family of dopamine receptors, whereas the D2, D3 and D4 subtypes are members of the D2-like family. Activation of D2-like family receptors is linked to G proteins of the G(i) family. This leads to a decrease in adenylate cyclase activity, thereby decreasing cAMP levels. Dopamine receptors are major therapeutic targets for neurological and psychiatric disorders such as drug abuse, depression, schizophrenia, or Parkinson's disease.


Pssm-ID: 320434 [Multi-domain]  Cd Length: 258  Bit Score: 45.98  E-value: 1.02e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  41 MILCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLML-SNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLL 119
Cdd:cd15308   13 AIIAGNVLVCLSVCTERALKTTTNYFIVSLAVADLLLALLVLPLYVySEFQGGVWTLSPVLCDALMTMDVMLCTASIFNL 92
                         90
                 ....*....|....*..
gi 302564612 120 AIMAYDRYVAICHPLHY 136
Cdd:cd15308   93 CAISVDRFIAVSVPLNY 109
7tmA_TACR cd15390
neurokinin receptors (or tachykinin receptors), member of the class A family of ...
45-134 1.70e-05

neurokinin receptors (or tachykinin receptors), member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents G-protein coupled receptors for a variety of neuropeptides of the tachykinin (TK) family. The tachykinins are widely distributed throughout the mammalian central and peripheral nervous systems and act as excitatory transmitters on neurons and cells in the gastrointestinal tract. The TKs are characterized by a common five-amino acid C-terminal sequence, Phe-X-Gly-Leu-Met-NH2, where X is a hydrophobic residue. The three major mammalian tachykinins are substance P (SP), neurokinin A (NKA), and neurokinin B (NKB). The physiological actions of tachykinins are mediated through three types of receptors: neurokinin receptor type 1 (NK1R), NK2R, and NK3R. SP is a high-affinity endogenous ligand for NK1R, which interacts with the Gq protein and activates phospholipase C, leading to elevation of intracellular calcium. NK2R is a high-affinity receptor for NKA, the tachykinin neuropeptide substance K. SP and NKA are found in the enteric nervous system and mediate in the regulation of gastrointestinal motility, secretion, vascular permeability, and pain perception. NK3R is activated by its high-affinity ligand, NKB, which is primarily involved in the central nervous system and plays a critical role in the regulation of gonadotropin hormone release and the onset of puberty.


Pssm-ID: 320512 [Multi-domain]  Cd Length: 289  Bit Score: 45.75  E-value: 1.70e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  45 GNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLAIMAY 124
Cdd:cd15390   17 GNLIVIWIVLAHKRMRTVTNYFLVNLAVADLLISAFNTVFNFTYLLYNDWPFGLFYCKFSNFVAITTVAASVFTLMAISI 96
                         90
                 ....*....|
gi 302564612 125 DRYVAICHPL 134
Cdd:cd15390   97 DRYIAIVHPL 106
7tmA_TACR-like cd15202
tachykinin receptors and related receptors, member of the class A family of ...
43-227 6.57e-05

tachykinin receptors and related receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes the neurokinin/tachykinin receptors and its closely related receptors such as orphan GPR83 and leucokinin-like peptide receptor. The tachykinins are widely distributed throughout the mammalian central and peripheral nervous systems and act as excitatory transmitters on neurons and cells in the gastrointestinal tract. The TKs are characterized by a common five-amino acid C-terminal sequence, Phe-X-Gly-Leu-Met-NH2, where X is a hydrophobic residue. The three major mammalian tachykinins are substance P (SP), neurokinin A (NKA), and neurokinin B (NKB). The physiological actions of tachykinins are mediated through three types of receptors: neurokinin receptor type 1 (NK1R), NK2R, and NK3R. SP is a high-affinity endogenous ligand for NK1R, which interacts with the Gq protein and activates phospholipase C, leading to elevation of intracellular calcium. NK2R is a high-affinity receptor for NKA, the tachykinin neuropeptide substance K. SP and NKA are found in the enteric nervous system and mediate in the regulation of gastrointestinal motility, secretion, vascular permeability, and pain perception. NK3R is activated by its high-affinity ligand, NKB, which is primarily involved in the central nervous system and plays a critical role in the regulation of gonadotropin hormone release and the onset of puberty.


Pssm-ID: 320330 [Multi-domain]  Cd Length: 288  Bit Score: 44.03  E-value: 6.57e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  43 LCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLAIM 122
Cdd:cd15202   15 LFGNVLVCWIIFKNQRMRTVTNYFIVNLAVADIMITLFNTPFTFVRAVNNTWIFGLFMCHFSNFAQYCSVHVSAYTLTAI 94
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 123 AYDRYVAICHPLHYTLIMTRKLCaqMLVGALGLALFLSLQLtALIFTLPFCGHRQEINHFLCDVPPVLRLACADIHVHQA 202
Cdd:cd15202   95 AVDRYQAIMHPLKPRISKTKAKF--IIAVIWTLALAFALPH-AICSKLETFKYSEDIVRSLCLEDWPERADLFWKYYDLA 171
                        170       180
                 ....*....|....*....|....*
gi 302564612 203 VLyvvgILVLTIPFLLICVSYVFIT 227
Cdd:cd15202  172 LF----ILQYFLPLLVISFAYARVG 192
7tmA_NPSR cd15197
neuropeptide S receptor, member of the class A family of seven-transmembrane G protein-coupled ...
42-230 1.05e-04

neuropeptide S receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Neuropeptide S (NPS) promotes arousal and anxiolytic-like effects by activating its cognate receptor NPSR. NPSR is widely expressed in the brain, and its activation induces an elevation of intracellular calcium and cAMP concentrations, presumably by coupling to G(s) and G(q) proteins. Mutations in NPSR have been associated with an increased susceptibility to asthma. NPSR was originally identified as an orphan receptor GPR154 and is also known as G protein receptor for asthma susceptibility (GPRA) or vasopressin receptor-related receptor 1 (VRR1).


Pssm-ID: 320325 [Multi-domain]  Cd Length: 294  Bit Score: 43.18  E-value: 1.05e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  42 ILCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLAI 121
Cdd:cd15197   14 IVVGNSSVLFALWMRKAKKSRMNFFITQLAIADLCVGLINVLTDIIWRITVEWRAGDFACKVIRYLQVVVTYASTYVLVA 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 122 MAYDRYVAICHPLHYtliMTRKLCAQMLV-GALGLALFLSLQltalifTLPFCGHRQEINhflcDVPPVLRLACADIHVh 200
Cdd:cd15197   94 LSIDRYDAICHPMNF---SQSGRQARVLIcVAWILSALFSIP------MLIIFEKTGLSN----GEVQCWILWPEPWYW- 159
                        170       180       190
                 ....*....|....*....|....*....|
gi 302564612 201 QAVLYVVGILVLTIPFLLICVSYVFITCAI 230
Cdd:cd15197  160 KVYMTIVAFLVFFIPATIISICYIIIVRTI 189
7tmA_AstC_insect cd15094
somatostatin-like receptor for allatostatin C, member of the class A family of ...
43-134 1.16e-04

somatostatin-like receptor for allatostatin C, member of the class A family of seven-transmembrane G protein-coupled receptors; G protein-coupled somatostatin receptors (SSTRs) are composed of five distinct subtypes (SSTR1-5) that display strong sequence similarity with opioid receptors. All five receptor subtypes bind the natural somatostatin (somatotropin release inhibiting factor), a polypeptide hormone that regulates a wide variety of physiological functions such as neurotransmission, cell proliferation, contractility of smooth muscle cells, and endocrine signaling as well as inhibition of the release of many secondary hormones. In Drosophila melanogaster and other insects, a 15-amino-acid peptide named allatostatin C(AstC) binds the somatostatin-like receptors. Two AstC receptors have been identified in Drosophila with strong sequence homology to human somatostatin and opioid receptors.


Pssm-ID: 320222 [Multi-domain]  Cd Length: 282  Bit Score: 43.23  E-value: 1.16e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  43 LCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKtISLAGCGAQMFFFVTLGSTDCFLLAIM 122
Cdd:cd15094   15 LVGNGLVIYVVLRYAKMKTVTNLYILNLAVADECFLIGLPFLIVTMILKYWP-FGAAMCKIYMVLTSINQFTSSFTLTVM 93
                         90
                 ....*....|..
gi 302564612 123 AYDRYVAICHPL 134
Cdd:cd15094   94 SADRYLAVCHPI 105
7tmA_DmOct-betaAR-like cd15066
Drosophila melanogaster beta-adrenergic receptor-like octopamine receptors and similar ...
43-160 1.33e-04

Drosophila melanogaster beta-adrenergic receptor-like octopamine receptors and similar receptors in bilateria; member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes Drosophila beta-adrenergic-like octopamine receptors and similar proteins. The biogenic amine octopamine is the invertebrate equivalent of vertebrate adrenergic neurotransmitters and exerts its effects through different G protein-coupled receptor types. Insect octopamine receptors are involved in the modulation of carbohydrate metabolism, muscular tension, cognition and memory. The activation of octopamine receptors mediating these actions leads to an increase in adenylate cyclase activity, thereby increasing cAMP levels. In Drosophila melanogaster, three subgroups have been classified on the basis of their structural homology and functional equivalents with vertebrate beta-adrenergic receptors: DmOctBeta1R, DmOctBeta2R, and DmOctBeta3R.


Pssm-ID: 320194 [Multi-domain]  Cd Length: 265  Bit Score: 42.75  E-value: 1.33e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  43 LCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLAIM 122
Cdd:cd15066   14 IFGNLLVIISVMRHRKLRVITNYFVVSLAMADMLVALCAMTFNASVEITGRWMFGYFMCDVWNSLDVYFSTASILHLCCI 93
                         90       100       110
                 ....*....|....*....|....*....|....*...
gi 302564612 123 AYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLS 160
Cdd:cd15066   94 SVDRYYAIVQPLEYPSKMTKRRVAIMLANVWISPALIS 131
7tmA_Trissin_R cd15012
trissin receptor and related proteins, member of the class A family of seven-transmembrane G ...
45-306 1.33e-04

trissin receptor and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup represents the Drosophila melanogaster trissin receptor and closely related invertebrate proteins which are a member of the class A family of seven-transmembrane G-protein coupled receptors. The cysteine-rich trissin has been shown to be an endogenous ligand for the orphan CG34381 in Drosophila melanogaster. Trissin is a peptide composed of 28 amino acids with three intrachain disulfide bonds with no significant structural similarities to known endogenous peptides. Cysteine-rich peptides are known to have antimicrobial or toxicant activities, although frequently their mechanism of action is poorly understood. Since the expression of trissin and its receptor is reported to predominantly localize to the brain and thoracicoabdominal ganglion, trissin is predicted to behave as a neuropeptide. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320140 [Multi-domain]  Cd Length: 277  Bit Score: 42.82  E-value: 1.33e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  45 GNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCgaQMFFFVTLGS--TDCFLLAIM 122
Cdd:cd15012   16 GNLLVILVVTSHRRMRTITNFFLANLAVADLCVGIFCVLQNLSIYLIPSWPFGEVLC--RMYQFVHSLSytASIGILVVI 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 123 AYDRYVAICHPLHytlimtrklCAQMLVGALGLALFLSLQLTALIFTLPFCGHRQEINHFLCDVPPVLRLACADIHVHQA 202
Cdd:cd15012   94 SVERYIAILHPLR---------CKQLLTAARLRVTIVTVWLTSAVYNTPYFVFSQTVEILVTQDGQEEEICVLDREMFNS 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 203 VLY--VVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRRAFSTcsshLTVVLLQYGCCSLVY----LRPRSSTSEDED 276
Cdd:cd15012  165 KLYdtINFIVWYLIPLLIMTVLYSKISIVLWKSSSIEARRKVVRL----LVAVVVSFALCNLPYharkMWQYWSEPYRCD 240
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 302564612 277 RQIALVYTFVTPLL-------NPLIYTLRNKDVKDAL 306
Cdd:cd15012  241 SNWNALLTPLTFLVlyfnsavNPLLYAFLSKRFRQSM 277
7tmA_GPRnna14-like cd15001
GPRnna14 and related proteins, member of the class A family of seven-transmembrane G ...
43-134 1.48e-04

GPRnna14 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes the orphan G-protein coupled receptor GPRnna14 found in body louse (Pediculus humanus humanus) as well as its closely related proteins of unknown function. These receptors are members of the class A rhodopsin-like G-protein coupled receptors. As an obligatory parasite of humans, the body louse is an important vector for human diseases, including epidemic typhus, relapsing fever, and trench fever. GPRnna14 shares significant sequence similarity with the members of the neurotensin receptor family. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320132 [Multi-domain]  Cd Length: 266  Bit Score: 42.65  E-value: 1.48e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  43 LCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLAIM 122
Cdd:cd15001   14 LIGNSLVIFVVARFRRMRSVTNVFLASLATADLLLLVFCVPLKTAEYFSPTWSLGAFLCKAVAYLQLLSFICSVLTLTAI 93
                         90
                 ....*....|..
gi 302564612 123 AYDRYVAICHPL 134
Cdd:cd15001   94 SIERYYVILHPM 105
7tmA_TAARs cd15055
trace amine-associated receptors, member of the class A family of seven-transmembrane G ...
101-143 1.52e-04

trace amine-associated receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The trace amine-associated receptors (TAARs) are a distinct subfamily within the class A G protein-coupled receptor family. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320183 [Multi-domain]  Cd Length: 285  Bit Score: 42.54  E-value: 1.52e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|...
gi 302564612 101 CGAQMFFFVTLGSTDCFLLAIMAYDRYVAICHPLHYTLIMTRK 143
Cdd:cd15055   73 CKLHSSLDYILTSASIFNLVLIAIDRYVAVCDPLLYPTKITIR 115
7tmA_alpha1B_AR cd15326
alpha-1 adrenergic receptors subtype B, member of the class A family of seven-transmembrane G ...
43-161 2.02e-04

alpha-1 adrenergic receptors subtype B, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-1 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that primarily mediate smooth muscle contraction: alpha-1A, alpha-1B, and alpha-1D. Activation of alpha-1 receptors by catecholamines such as norepinephrine and epinephrine couples to the G(q) protein, which then activates the phospholipase C pathway, leading to an increase in IP3 and calcium. Consequently, the elevation of intracellular calcium concentration leads to vasoconstriction in smooth muscle of blood vessels. In addition, activation of alpha-1 receptors by phenylpropanolamine (PPA) produces anorexia and may induce appetite suppression in rats.


Pssm-ID: 320449 [Multi-domain]  Cd Length: 261  Bit Score: 42.19  E-value: 2.02e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  43 LCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLAIM 122
Cdd:cd15326   15 IVGNILVILSVVCNRHLRIPTNYFIVNLAIADLLLSFTVLPFSATLEILGYWVFGRIFCDIWAAVDVLCCTASILSLCAI 94
                         90       100       110
                 ....*....|....*....|....*....|....*....
gi 302564612 123 AYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSL 161
Cdd:cd15326   95 SIDRYIGVRHSLQYPTIVTRKRAILALLGVWVLSTVISI 133
7tmA_5-HT6 cd15054
serotonin receptor subtype 6, member of the class A family of seven-transmembrane G ...
44-160 2.11e-04

serotonin receptor subtype 6, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT6 receptors are a subfamily of serotonin receptors that bind the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the mammalian central nervous system (CNS). 5-HT6 receptors are selectively linked to G proteins of the G(s) family, which positively stimulate adenylate cyclase, causing cAMP formation and activation of protein kinase A. The 5-HT6 receptors mediates excitatory neurotransmission and are involved in learning and memory; thus they are promising targets for the treatment of cognitive impairment. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320182 [Multi-domain]  Cd Length: 267  Bit Score: 42.10  E-value: 2.11e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  44 CGNTAIIWVVCTRSTLRTPMYFFLSNLsFLEICYTTAVV--PLMLSNIFGAQkTISLAGCGAQMFFFVTLGSTDCFLLAI 121
Cdd:cd15054   16 AGNSLLILLIFTQRSLRNTSNYFLVSL-FMSDLMVGLVVmpPAMLNALYGRW-VLARDFCPIWYAFDVMCCSASILNLCV 93
                         90       100       110
                 ....*....|....*....|....*....|....*....
gi 302564612 122 MAYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLS 160
Cdd:cd15054   94 ISLDRYLLIISPLRYKLRMTPPRALALILAAWTLAALAS 132
7tmA_Galanin_R-like cd14971
galanin receptor and related proteins, member of the class A family of seven-transmembrane G ...
43-223 2.37e-04

galanin receptor and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes G-protein coupled galanin receptors, kisspeptin receptor and allatostatin-A receptor (AstA-R) in insects. These receptors, which are members of the class A of seven transmembrane GPCRs, share a high degree of sequence homology among themselves. The galanin receptors bind galanin, a neuropeptide that is widely expressed in the brain, peripheral tissues, and endocrine glands. Galanin is implicated in numerous neurological and psychiatric diseases including Alzheimer's disease, eating disorders, and epilepsy, among many others. KiSS1-derived peptide receptor (also known as GPR54 or kisspeptin receptor) binds the peptide hormone kisspeptin (metastin), which encoded by the metastasis suppressor gene (KISS1) expressed in various endocrine and reproductive tissues. AstA-R is a G-protein coupled receptor that binds allatostatin A. Three distinct types of allatostatin have been identified in the insects and crustaceans: AstA, AstB, and AstC. They both inhibit the biosynthesis of juvenile hormone and exert an inhibitory influence on food intake. Therefore, allatostatins are considered as potential targets for insect control.


Pssm-ID: 320102 [Multi-domain]  Cd Length: 281  Bit Score: 42.07  E-value: 2.37e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  43 LCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPL------MLSNIFGAQKtislagCGAQMFFFVTLGSTDC 116
Cdd:cd14971   15 LVGNSLVILVVARNKPMRSTTNLFILNLAVADLTFLLFCVPFtatiypLPGWVFGDFM------CKFVHYFQQVSMHASI 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 117 FLLAIMAYDRYVAICHPLHYTLIMTRKlcaqmlvgaLGLALFLSLQLTALIFTLPFCGHRQEINHFLCDVPPVLRLACAD 196
Cdd:cd14971   89 FTLVAMSLDRFLAVVYPLRSLHIRTPR---------NALAASGCIWVVSLAVAAPVLALHRLRNYTPGNRTVCSEAWPSR 159
                        170       180
                 ....*....|....*....|....*..
gi 302564612 197 IHVHQAVLYVVGILVLtIPFLLICVSY 223
Cdd:cd14971  160 AHRRAFALCTFLFGYL-LPLLLICVCY 185
7tmA_CCK-BR cd15979
cholecystokinin receptor type B, member of the class A family of seven-transmembrane G ...
41-228 2.59e-04

cholecystokinin receptor type B, member of the class A family of seven-transmembrane G protein-coupled receptors; Cholecystokinin receptors (CCK-AR and CCK-BR) are a group of G-protein coupled receptors which bind the peptide hormones cholecystokinin (CCK) or gastrin. CCK, which facilitates digestion in the small intestine, and gastrin, a major regulator of gastric acid secretion, are highly similar peptides. Like gastrin, CCK is a naturally-occurring linear peptide that is synthesized as a preprohormone, then proteolytically cleaved to form a family of peptides with the common C-terminal sequence (Gly-Trp-Met-Asp-Phe-NH2), which is required for full biological activity. CCK-AR (type A, alimentary; also known as CCK1R) is found abundantly on pancreatic acinar cells and binds only sulfated CCK-peptides with very high affinity, whereas CCK-BR (type B, brain; also known as CCK2R), the predominant form in the brain and stomach, binds CCK or gastrin and discriminates poorly between sulfated and non-sulfated peptides. CCK is implicated in regulation of digestion, appetite control, and body weight, and is involved in neurogenesis via CCK-AR. There is some evidence to support that CCK and gastrin, via their receptors, are involved in promoting cancer development and progression, acting as growth and invasion factors.


Pssm-ID: 320645 [Multi-domain]  Cd Length: 275  Bit Score: 42.11  E-value: 2.59e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  41 MILCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVP------LMLSNIFGAqktislAGCGAQMFFFVTLGST 114
Cdd:cd15979   13 LSVFGNMLIIVVLGLNKRLRTVTNSFLLSLALSDLMLAVFCMPftlipnLMGTFIFGE------VICKAVAYLMGVSVSV 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 115 DCFLLAIMAYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGHRQEINHflcdvppVLRLAC 194
Cdd:cd15979   87 STFSLVAIAIERYSAICNPLQSRVWQTRSHAYRVIAATWLLSGLIMIPYPVYSVTVPVPVGDRPRGH-------QCRHAW 159
                        170       180       190
                 ....*....|....*....|....*....|....
gi 302564612 195 ADIHVHQAVLYVVGILVLTIPFLLICVSYVFITC 228
Cdd:cd15979  160 PSAQVRQAWYVLLLLILFFIPGVVMIVAYGLISR 193
7tmA_GPR61_GPR62-like cd15220
G protein-coupled receptors 61 and 62, member of the class A family of seven-transmembrane G ...
43-306 4.39e-04

G protein-coupled receptors 61 and 62, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup includes the orphan receptors GPR61 and GPR62, which are both constitutively active and predominantly expressed in the brain. While GPR61 couples to G(s) subtype of G proteins, the signaling pathway and function of GPR 62 are unknown. GPR61-deficient mice displayed significant hyperphagia and heavier body weight compared to wild-type mice, suggesting that GPR61 is involved in the regulation of food intake and body weight. GPR61 transcript expression was found in the caudate, putamen, and thalamus of human brain, whereas GPR62 transcript expression was found in the basal forebrain, frontal cortex, caudate, putamen, thalamus, and hippocampus. Both receptors share the highest sequence homology with each other and comprise a conserved subgroup within the class A family of GPCRs, which includes receptors for hormones, neurotransmitters, sensory stimuli, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, which then activate the heterotrimeric G proteins. Members of this subgroup contain [A/E]RY motif, a variant of the highly conserved Asp-Arg-Tyr (DRY) motif found in the third transmembrane helix (TM3) of the class A GPCRs and important for efficient G protein-coupled signal transduction.


Pssm-ID: 410633 [Multi-domain]  Cd Length: 264  Bit Score: 41.28  E-value: 4.39e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  43 LCGNTAIIWVVCTRSTLRTpmYFFLSNLSFLEICYTTAVVPLML--SNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLA 120
Cdd:cd15220   14 LVGNTAVMVVIAKTPHLRK--FAFVCHLCVVDLLAALLLMPLGIlsSSPFFLGVVFGEAECRVYIFLSVCLVSASILTIS 91
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 121 IMAYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLqltALIFTLPFCGHRqeinhflcdvPPVLRLACADIHVH 200
Cdd:cd15220   92 AISVERYYYIVHPMRYEVKMTIGLVAAVLVGVWVKALLLGL---LPVLGWPSYGGP----------APIAARHCSLHWSH 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 201 QAVLYVVGILVLTIPFLLICVSYVFITCAILcirsaegrrRAFSTCSSHLTVVLL--QYGCCSLVY----LRPRSSTSED 274
Cdd:cd15220  159 SGHRGVFVVLFALVCFLLPLLLILVVYCGVF---------KVFGGGKAALTLAAIvgQFLCCWLPYfafhLYSALAASPV 229
                        250       260       270
                 ....*....|....*....|....*....|....*
gi 302564612 275 EDRQIALVYTFV---TPLLNPLIYTLRNKDVKDAL 306
Cdd:cd15220  230 SGGEAEEVVTWLaysCFAVNPFFYGLLNRQIREEL 264
7tmA_Prostanoid_R cd14981
G protein-coupled receptors for prostanoids, member of the class A family of ...
45-184 5.00e-04

G protein-coupled receptors for prostanoids, member of the class A family of seven-transmembrane G protein-coupled receptors; Prostanoids are the cyclooxygenase (COX) metabolites of arachidonic acid, which include the prostaglandins (PGD2, PGE2, PGF2alpha), prostacyclin (PGI2), and thromboxane A2 (TxA2). These five major bioactive prostanoids acts as mediators or modulators in a wide range of physiological and pathophysiological processes within the kidney and play important roles in inflammation, platelet aggregation, and vasoconstriction/relaxation, among many others. They act locally by preferentially interacting with G protein-coupled receptors designated DP, EP. FP, IP, and TP, respectively. The phylogenetic tree suggests that the prostanoid receptors can be grouped into two major branches: G(s)-coupled (DP1, EP2, EP4, and IP) and G(i)- (EP3) or G(q)-coupled (EP1, FP, and TP), forming three clusters.


Pssm-ID: 320112 [Multi-domain]  Cd Length: 288  Bit Score: 41.08  E-value: 5.00e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  45 GNTAIIWVVCTRST--LRTPMYFFLSNLS---FLEICYTTAVVPLMLSNIFGAQKTISLagCGAQMFFFVTLGSTDCFLL 119
Cdd:cd14981   17 GNLLALIVLARSSKshKWSVFYRLVAGLAitdLLGILLTSPVVLAVYASNFEWDGGQPL--CDYFGFMMSFFGLSSLLIV 94
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 302564612 120 AIMAYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLqltaliftLPFCGHRQEINHFLC 184
Cdd:cd14981   95 CAMAVERFLAITHPFFYNSHVKKRRARLMLGAVWAFALLIAS--------LPLLGLGSYVLQYPG 151
7tmA_NKR_NK3R cd16003
neuromedin-K receptor, member of the class A family of seven-transmembrane G protein-coupled ...
45-134 6.03e-04

neuromedin-K receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The neuromedin-K receptor (NKR), also known as tachykinin receptor 3 (TACR3) or neurokinin B receptor or NK3R, is a G-protein coupled receptor that specifically binds to neurokinin B. The tachykinins (TKs) act as excitatory transmitters on neurons and cells in the gastrointestinal tract. The TKs are characterized by a common five-amino acid C-terminal sequence, Phe-X-Gly-Leu-Met-NH2, where X is a hydrophobic residue. The three major mammalian tachykinins are substance P (SP), neurokinin A (NKA), and neurokinin B (NKB). The physiological actions of tachykinins are mediated through three types of receptors: neurokinin receptor type 1 (NK1R), NK2R, and NK3R. NK3R is activated by its high-affinity ligand, NKB, which is primarily involved in the central nervous system and plays a critical role in the regulation of gonadotropin hormone release and the onset of puberty.


Pssm-ID: 320669 [Multi-domain]  Cd Length: 282  Bit Score: 40.68  E-value: 6.03e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  45 GNTAIIWVVCTRSTLRTPMYFFLSNLSFLEIcyTTAVVPLMLSNIFGAQKT--ISLAGCGAQMFFFVTLGSTDCFLLAIM 122
Cdd:cd16003   17 GNLIVIWIILAHKRMRTVTNYFLVNLAFSDA--SMAAFNTLINFIYALHSEwyFGEAYCRFHNFFPITSVFASIYSMTAI 94
                         90
                 ....*....|..
gi 302564612 123 AYDRYVAICHPL 134
Cdd:cd16003   95 AVDRYMAIIDPL 106
7tmA_Beta_AR cd15058
beta adrenergic receptors (adrenoceptors), member of the class A family of seven-transmembrane ...
42-243 6.07e-04

beta adrenergic receptors (adrenoceptors), member of the class A family of seven-transmembrane G protein-coupled receptors; The beta adrenergic receptor (beta adrenoceptor), also known as beta AR, is activated by hormone adrenaline (epinephrine) and plays important roles in regulating cardiac function and heart rate, as well as pulmonary physiology. The human heart contains three subtypes of the beta AR: beta-1 AR, beta-2 AR, and beta-3 AR. Beta-1 AR and beta-2 AR, which expressed at about a ratio of 70:30, are the major subtypes involved in modulating cardiac contractility and heart rate by positively stimulating the G(s) protein-adenylate cyclase-cAMP-PKA signaling pathway. In contrast, beta-3 AR produces negative inotropic effects by activating inhibitory G(i) proteins. The aberrant expression of beta-ARs can lead to cardiac dysfunction such as arrhythmias or heart failure. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320186 [Multi-domain]  Cd Length: 305  Bit Score: 40.90  E-value: 6.07e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  42 ILCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLAI 121
Cdd:cd15058   14 IVVGNLLVIIAIARTSRLQTMTNIFITSLACADLVMGLLVVPLGATIVVTGKWQLGNFWCELWTSVDVLCVTASIETLCV 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 122 MAYDRYVAICHPLHYTLIMTrKLCAQMLVGALGLalflslqLTALIFTLPFCGHRQEINH---FLCDVPPvlrlACADIH 198
Cdd:cd15058   94 IAVDRYIAITRPLRYQVLLT-KRRARVIVCVVWI-------VSALVSFVPIMNQWWRANDpeaNDCYQDP----TCCDFR 161
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*.
gi 302564612 199 VHQAVLYVVGILVLTIPFL-LICVSYVFITCAILCIRSAEGRRRAF 243
Cdd:cd15058  162 TNMAYAIASSVVSFYIPLLiMIFVYARVFLIATRQLQLIDKRRLRF 207
7tmA_KiSS1R cd15095
KiSS1-derived peptide (kisspeptin) receptor, member of the class A family of ...
43-226 6.44e-04

KiSS1-derived peptide (kisspeptin) receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The G protein-coupled KiSS1-derived peptide receptor (GPR54 or kisspeptin receptor) binds the peptide hormone kisspeptin (previously known as metastin), which encoded by the metastasis suppressor gene (KISS1) expressed in various endocrine and reproductive tissues. The KiSS1 receptor is coupled to G proteins of the G(q/11) family, which lead to activation of phospholipase C and increase of intracellular calcium. This signaling cascade plays an important role in reproduction by regulating the secretion of gonadotropin-releasing hormone.


Pssm-ID: 320223 [Multi-domain]  Cd Length: 288  Bit Score: 40.73  E-value: 6.44e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  43 LCGNTAIIWVVCTRSTLRTPMYFFLSNL-----SFLEICY-TTAVVPLMLSNIFGaqktisLAGCGAQMFFF-VTLGSTd 115
Cdd:cd15095   15 LAGNSLVIYVVSRHREMRTVTNYYIVNLavtdlAFLVCCVpFTAALYATPSWVFG------DFMCKFVNYMMqVTVQAT- 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 116 CFLLAIMAYDRYVAICHPLhyTLIMTRKLCAQMLVGALGLALFLSLQLTALIFtlpfcgHRQEINHFLCDvppvlRLACA 195
Cdd:cd15095   88 CLTLTALSVDRYYAIVHPI--RSLRFRTPRVAVVVSACIWIVSFLLSIPVAIY------YRLEEGYWYGP-----QTYCR 154
                        170       180       190
                 ....*....|....*....|....*....|....*.
gi 302564612 196 DIHVHQA-----VLYVVGILVLtIPFLLICVSYVFI 226
Cdd:cd15095  155 EVWPSKAfqkayMIYTVLLTYV-IPLAIIAVCYGLI 189
7tmA_Opsin_Gq_invertebrates cd15337
invertebrate Gq opsins, member of the class A family of seven-transmembrane G protein-coupled ...
44-230 7.13e-04

invertebrate Gq opsins, member of the class A family of seven-transmembrane G protein-coupled receptors; The invertebrate Gq-coupled opsin subfamily includes the arthropod and mollusc visual opsins. Like the vertebrate visual opsins, arthropods possess color vision by the use of multiple opsins sensitive to different light wavelengths. The invertebrate Gq opsins are closely related to the vertebrate melanopsins, the primary photoreceptor molecules for non-visual responses to light, and the R1-R6 photoreceptors, which are the fly equivalent to the vertebrate rods. The Gq opsins belong the class A of the G protein-coupled receptors and possess seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320459 [Multi-domain]  Cd Length: 292  Bit Score: 40.77  E-value: 7.13e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  44 CGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTtAVV--PLMLSNIFGaQKTI------SLAGCGAQMFFFVTLGStd 115
Cdd:cd15337   16 IGNLLVIYLFSKTKSLRTPSNMFIINLAISDFGFS-AVNgfPLKTISSFN-KKWIwgkvacELYGFAGGIFGFMSITT-- 91
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 116 cflLAIMAYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLqltaliftLPFCGhrqeinhFLCDVPPVLRLACA 195
Cdd:cd15337   92 ---LAAISIDRYLVIAKPLEAMKKMTFKRAFIMIIIIWLWSLLWSI--------PPFFG-------WGRYVPEGFQTSCT 153
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|
gi 302564612 196 DIHVHQ---AVLYVVGILVL--TIPFLLICVSYVFITCAI 230
Cdd:cd15337  154 FDYLSRdlnNRLFILGLFIFgfLCPLLIIIFCYVNIIRAV 193
7tmA_SKR_NK2R cd16004
substance-K receptor, member of the class A family of seven-transmembrane G protein-coupled ...
45-156 7.60e-04

substance-K receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The substance-K receptor (SKR), also known as tachykinin receptor 2 (TACR2) or neurokinin A receptor or NK2R, is a G-protein coupled receptor that specifically binds to neurokinin A. The tachykinins are widely distributed throughout the mammalian central and peripheral nervous systems and act as excitatory transmitters on neurons and cells in the gastrointestinal tract. The TKs are characterized by a common five-amino acid C-terminal sequence, Phe-X-Gly-Leu-Met-NH2, where X is a hydrophobic residue. The three major mammalian tachykinins are substance P (SP), neurokinin A (NKA), and neurokinin B (NKB). The physiological actions of tachykinins are mediated through three types of receptors: neurokinin receptor type 1 (NK1R), NK2R, and NK3R. SP is a high-affinity endogenous ligand for NK1R, which interacts with the Gq protein and activates phospholipase C, leading to elevation of intracellular calcium. NK2R is a high-affinity receptor for NKA, the tachykinin neuropeptide substance K. SP and NKA are found in the enteric nervous system and mediate the regulation of gastrointestinal motility, secretion, vascular permeability, and pain perception.


Pssm-ID: 320670 [Multi-domain]  Cd Length: 285  Bit Score: 40.60  E-value: 7.60e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  45 GNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICytTAVVPLMLSNIFGAQKT--ISLAGCGAQMFFFVTLGSTDCFLLAIM 122
Cdd:cd16004   17 GNATVIWIILAHRRMRTVTNYFIVNLALADLS--MAAFNTAFNFVYASHNDwyFGLEFCRFQNFFPITAMFVSIYSMTAI 94
                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 302564612 123 AYDRYVAICHPLHYTLIM--TRKLCAQMLVGALGLA 156
Cdd:cd16004   95 AADRYMAIIHPFKPRLSAgsTKVVIAGIWLVALALA 130
7tmA_Melanopsin cd15336
vertebrate melanopsins (Opsin-4), member of the class A family of seven-transmembrane G ...
45-230 9.72e-04

vertebrate melanopsins (Opsin-4), member of the class A family of seven-transmembrane G protein-coupled receptors; Melanopsin (also called Opsin-4) is the G protein-coupled photopigment that mediates non-visual responses to light. In mammals, these photoresponses include the photo-entrainment of circadian rhythm, pupillary constriction, and acute nocturnal melatonin suppression. Mammalian melanopsins are expressed only in the inner retina, whereas non-mammalian vertebrate melanopsins are localized in various extra-retinal tissues such as iris, brain, pineal gland, and skin. Melanopsins belong the class A of the G protein-coupled receptors and possess seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320458 [Multi-domain]  Cd Length: 290  Bit Score: 40.09  E-value: 9.72e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  45 GNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLAIMAY 124
Cdd:cd15336   17 GNALVIYAFCRSKKLRTPANYFIINLAVSDFLMSLTQSPIFFVNSLHKRWIFGEKGCELYAFCGALFGITSMITLLAISL 96
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 125 DRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQltaliftlPFCGhrqeinhFLCDVPPVLRLACADIHV----- 199
Cdd:cd15336   97 DRYLVITKPLASIRWVSKKRAMIIILLVWLYSLAWSLP--------PLFG-------WSAYVPEGLLTSCTWDYMtftps 161
                        170       180       190
                 ....*....|....*....|....*....|.
gi 302564612 200 HQAVLYVVGILVLTIPFLLICVSYVFITCAI 230
Cdd:cd15336  162 VRAYTMLLFCFVFFIPLGIIIYCYLFIFLAI 192
7tmA_NPYR-like cd15203
neuropeptide Y receptors and related proteins, member of the class A family of ...
43-230 1.13e-03

neuropeptide Y receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; NPY is a 36-amino acid peptide neurotransmitter with a C-terminal tyrosine amide residue that is widely distributed in the brain and the autonomic nervous system of many mammalian species. NPY exerts its functions through five, G-protein coupled receptor subtypes including NPY1R, NPY2R, NPY4R, NPY5R, and NPY6R; however, NPY6R is not functional in humans. NYP receptors are also activated by its two other family members, peptide YY (PYY) and pancreatic polypeptide (PP). They typically couple to Gi or Go proteins, which leads to a decrease in adenylate cyclase activity, thereby decreasing intracellular cAMP levels, and are involved in diverse physiological roles including appetite regulation, circadian rhythm, and anxiety. Also included in this subgroup is prolactin-releasing peptide (PrRP) receptor (previously known as GPR10), which is activated by its endogenous ligand PrRP, a neuropeptide possessing C-terminal Arg-Phe-amide motif. There are two active isoforms of PrRP in mammals: one consists of 20 amino acid residues (PrRP-20) and the other consists of 31 amino acid residues (PrRP-31). PrRP receptor shows significant sequence homology to the NPY receptors, and a micromolar level of NPY can bind and completely inhibit the PrRP-evoked intracellular calcium response in PrRP receptor-expressing cells, suggesting that the PrRP receptor shares a common ancestor with the NPY receptors.


Pssm-ID: 320331 [Multi-domain]  Cd Length: 293  Bit Score: 39.90  E-value: 1.13e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  43 LCGNTAIIWVVCTRSTLRTPMYFFLSNLSF--LEICYT----TAVVPLMLSNIFGAqktislAGCGAQMFFFVTLGSTDC 116
Cdd:cd15203   15 VVGNLLVIYVVLRNKSMQTVTNIFILNLAVsdLLLCLVslpfTLIYTLTKNWPFGS------ILCKLVPSLQGVSIFVST 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 117 FLLAIMAYDRYVAICHPLHYtlIMTRKLCAQMLVGALGLALFLSLQLtaLIFtlpfcghrQEINHFLCDVPPVLRLACAD 196
Cdd:cd15203   89 LTLTAIAIDRYQLIVYPTRP--RMSKRHALLIIALIWILSLLLSLPL--AIF--------QELSDVPIEILPYCGYFCTE 156
                        170       180       190
                 ....*....|....*....|....*....|....*...
gi 302564612 197 --IHVHQAVLYVVGILVLT--IPFLLICVSYVFITCAI 230
Cdd:cd15203  157 swPSSSSRLIYTISVLVLQfvIPLLIISFCYFRISLKL 194
7tmA_GPR161 cd15214
orphan G protein-coupled receptor 161, member of the class A family of seven-transmembrane G ...
41-306 1.22e-03

orphan G protein-coupled receptor 161, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR161, an orphan GPCR, is a negative regulator of Sonic hedgehog (Shh) signaling, which promotes the processing of zinc finger protein GLI3 into its transcriptional repressor form (GLI3R) during neural tube development. In the absence of Shh, this proteolytic processing is normally mediated by cAMP-dependent protein kinase A (PKA). GPR161 is recruited to primary cilia by a mechanism depends on TULP3 (tubby-related protein 3) and the intraflagellar complex A (IFT-A). Moreover, Gpr161 knockout mice show phenotypes observed in Tulp3/IFT-A mutants, and cause increased Shh signaling in the neural tube. Taken together, GPR161 negatively regulates the PKA-dependent GLI3 processing in the absence of Shh signal by coupling to G(s) protein, which causes activation of adenylate cyclase, elevated cAMP levels, and activation of PKA. Conversely, in the presence of Shh, GPR161 is removed from the cilia by internalization into the endosomal recycling compartment, leading to downregulation of its activity and thereby allowing Shh signaling to proceed. In addition, GPR161 is over-expressed in triple-negative breast cancer (lacking estrogen receptor, progesterone receptor, and human epidermal growth factor receptor 2 (HER2) expression) and correlates with poor prognosis. Mutations of GPR161 have also been implicated as a novel cause for pituitary stalk interruption syndrome (PSIS), a rare congenital disease of the pituitary gland. GPR161 is a member of the class A family of GPCRs, which contains receptors for hormones, neurotransmitters, sensory stimuli, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320342 [Multi-domain]  Cd Length: 261  Bit Score: 39.92  E-value: 1.22e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  41 MILCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLA 120
Cdd:cd15214   12 LICLGNLVIVVTLYKKSYLLTLSNKFVFSLTLSNLLLSVLVLPFVVTSSIRREWIFGVVWCNFSALLYLLISSASMLTLG 91
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 121 IMAYDRYVAICHPLHYTLIMTrklcaqmlvGALGLALFLSLQLTALIFTLP--FCGHRQEINHFlcdvppvlRLAC-ADI 197
Cdd:cd15214   92 AIAIDRYYAVLYPMVYPMKIT---------GNRAVLALVYIWLHSLIGCLPplFGWSSLEFDRF--------KWMCvAAW 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 198 HVHQAVLYVVGILVLTIPFLLICVSYVFItcailcIRSAEGRR-RAFSTCSSHLTVVLLQYGCCSLVY----LRPRSSTS 272
Cdd:cd15214  155 HKEAGYTAFWQVWCALLPFVVMLVCYGFI------FRVARANQcKAFITILVVLGAFVTTWGPYMVVIsteaLWGKNSVS 228
                        250       260       270
                 ....*....|....*....|....*....|....
gi 302564612 273 EDEDrQIALVYTFVTPLLNPLIYTLRNKDVKDAL 306
Cdd:cd15214  229 PQLE-TLATWLSFTSAVCHPLIYGLWNKTVRKEL 261
7tmA_V1bR cd15386
vasopressin receptor subtype 1B, member of the class A family of seven-transmembrane G ...
45-170 1.23e-03

vasopressin receptor subtype 1B, member of the class A family of seven-transmembrane G protein-coupled receptors; The V1b receptor is specifically expressed in corticotropes of the anterior pituitary and plays a critical role in regulating the activity of hypothalamic-pituitary-adrenal axis, a key part of the neuroendocrine system that controls reactions to stress, by maintaining adrenocorticotropic hormone (ACTH) and corticosterone levels. Vasopressin (also known as arginine vasopressin or anti-diuretic hormone) is synthesized in the hypothalamus and is released from the posterior pituitary gland. The actions of vasopressin are mediated by the interaction of this hormone with three receptor subtypes: V1aR, V1bR, and V2R. These subtypes are differ in localization, function, and signaling pathways. Activation of V1aR and V1bR stimulate phospholipase C, while activation of V2R stimulates adenylate cyclase. Although vasopressin and oxytocin differ only by two amino acids and stimulate the same cAMP/PKA pathway, they have divergent physiological functions. Vasopressin is involved in regulating blood pressure and the balance of water and sodium ions, whereas oxytocin plays an important role in the uterus during childbirth and in lactation.


Pssm-ID: 320508 [Multi-domain]  Cd Length: 302  Bit Score: 40.17  E-value: 1.23e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  45 GNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTT-AVVPLMLSNIfgaqkTISLAG----CGAQMFFFVTLGSTDCFLL 119
Cdd:cd15386   17 GNLAVLLAMYRMRRKMSRMHLFVLHLALTDLVVALfQVLPQLIWEI-----TYRFQGpdllCRAVKYLQVLSMFASTYML 91
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|.
gi 302564612 120 AIMAYDRYVAICHPLHYTLIMTRKLCAqMLVGALGLALFLSLQlTALIFTL 170
Cdd:cd15386   92 IMMTVDRYIAVCHPLRTLQQPSRQAYL-MIGATWLLSCILSLP-QVFIFSL 140
7tmA_5-HT1E cd15335
serotonin receptor subtype 1E, member of the class A family of seven-transmembrane G ...
46-306 1.37e-03

serotonin receptor subtype 1E, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT1 receptors, one of 14 mammalian 5-HT receptors, is a member of the class A of GPCRs and is activated by the endogenous neurotransmitter and peripheral signal mediator serotonin (5-hydroxytryptamine, 5-HT). The 5-HT1 receptors mediate inhibitory neurotransmission by coupling to G proteins of the G(i/o) family, which lead to a decrease in adenylate cyclase activity, thereby decreasing intracellular cAMP levels and calcium influx. The 5-HT1 receptor subfamily includes 5 subtypes: 5-HT1A, 5-HT1B, 5-HT1D, 5-HT1E, and 5-HT1F. There is no 5-HT1C receptor subtype, as it has been reclassified as the 5-HT2C receptor. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in neurologic disorders such as migraine, schizophrenia, and depression.


Pssm-ID: 320457 [Multi-domain]  Cd Length: 258  Bit Score: 39.52  E-value: 1.37e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  46 NTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLAIMAYD 125
Cdd:cd15335   18 NSAVIAAICTTKKLHQPANYLICSLAVTDFLVAVLVMPLSITYIVMDTWTLGYFICEIWLSVDMTCCTCSILHLCVIALD 97
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 126 RYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQltalifTLPFCGHRqeinhflcDVPPVLRLACADIHVHQAVLY 205
Cdd:cd15335   98 RYWAITDAIEYARKRTAKRAGLMILTVWTISIFISIP------PLFWRNHH--------DANIPSQCIIQHDHVIYTIYS 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 206 VVGilVLTIPFLLICVSYVFITCAilcirsAEGRRRAfstcSSHLTVVLLQYGCCSL--------VYLRPRSSTSEDEDR 277
Cdd:cd15335  164 TFG--AFYIPLTLILILYYRIYHA------ASRERKA----ARILGLILGAFILSWLpffikeliVGLSVMTVSPEVADF 231
                        250       260
                 ....*....|....*....|....*....
gi 302564612 278 QIALVYtfVTPLLNPLIYTLRNKDVKDAL 306
Cdd:cd15335  232 LTWLGY--VNSLVNPLLYTSFNEDFKLAF 258
7tmA_Adenosine_R_A3 cd15070
adenosine receptor subtype A3, member of the class A family of seven-transmembrane G ...
45-161 1.46e-03

adenosine receptor subtype A3, member of the class A family of seven-transmembrane G protein-coupled receptors; The A3 receptor, a member of the adenosine receptor family of G protein-coupled receptors, is coupled to G proteins of the inhibitory G(i) family, which lead to inhibition of adenylate cyclase and thereby lowering the intracellular cAMP levels. The A3 receptor has a sustained protective function in the heart during cardiac ischemia and contributes to inhibition of neutrophil degranulation in neutrophil-mediated tissue injury. Moreover, activation of A3 receptor by adenosine protects astrocytes from cell death induced by hypoxia.


Pssm-ID: 320198 [Multi-domain]  Cd Length: 280  Bit Score: 39.76  E-value: 1.46e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  45 GNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLsnIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLAIMAY 124
Cdd:cd15070   17 GNVLVIWVVKLNPSLRTTTFYFIVSLALADIAVGVLVIPLAI--VVSLGVTIHFYSCLFMSCLLVVFTHASIMSLLAIAV 94
                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 302564612 125 DRYVAICHPLHYTLIMTRKlcaqMLVGALGLALFLSL 161
Cdd:cd15070   95 DRYLRVKLTVRYRIVTTQR----RIWLALGLCWLVSF 127
7tmA_GPR84-like cd15210
G protein-coupled receptor 84 and similar proteins, member of the class A family of ...
44-305 1.54e-03

G protein-coupled receptor 84 and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR84, also known as the inflammation-related G-Protein coupled receptor EX33, is a receptor for medium-chain free fatty acid (FFA) with carbon chain lengths of C9 to C14. Among these medium-chain FFAs, capric acid (C10:0), undecanoic acid (C11:0), and lauric acid (C12:0) are the most potent endogenous agonists of GPR84, whereas short-chain and long-chain saturated and unsaturated FFAs do not activate this receptor. GPR84 contains a [G/N]RY-motif instead of the highly conserved Asp-Arg-Tyr (DRY) motif found in the third transmembrane helix (TM3) of the rhodopsin-like class A receptors and important for efficient G protein-coupled signal transduction. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, which then activate the heterotrimeric G proteins. In the case of GPR84, activation of the receptor couples to a pertussis toxin sensitive G(i/o)-protein pathway. GPR84 knockout mice showed increased Th2 cytokine production including IL-4, IL-5, and IL-13 compared to wild-type mice. It has been also shown that activation of GPR84 augments lipopolysaccharide-stimulated IL-8 production in polymorphonuclear leukocytes and TNF-alpha production in macrophages, suggesting that GPR84 may function as a proinflammatory receptor.


Pssm-ID: 320338 [Multi-domain]  Cd Length: 254  Bit Score: 39.56  E-value: 1.54e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  44 CGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLAIMA 123
Cdd:cd15210   16 PGNLLTVLALLRSKKLRTRTNAFIINLSISDLLFCAFNLPLAASTFLHQAWIHGETLCRVFPLLRYGLVAVSLLTLVLIT 95
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 124 YDRYVAICHPLHYTLIMTRKLCAQMLVG--ALGLALFLSLQLtALIFTLPFcghrqEINHFLCDVppvlrLACADIHVHQ 201
Cdd:cd15210   96 LNRYILIAHPSLYPRIYTRRGLALMIAGtwIFSFGSFLPLWL-GIWGRFGL-----DPKVCSCSI-----LRDKKGRSPK 164
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 202 AVLYVVGILvltIPFLLICVSYVfitcailcirsaegrRRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQI-- 279
Cdd:cd15210  165 TFLFVFGFV---LPCLVIIICYA---------------RREDRRLTRMMLVIFLCFLVCYLPITLVNVFDDEVAPPVLhi 226
                        250       260
                 ....*....|....*....|....*..
gi 302564612 280 -ALVYTFVTPLLNPLIYTLRNKDVKDA 305
Cdd:cd15210  227 iAYVLIWLSSCINPIIYVAMNRQYRQA 253
7tmA_Vasopressin-like cd14986
vasopressin receptors and its related G protein-coupled receptors, member of the class A ...
43-254 1.60e-03

vasopressin receptors and its related G protein-coupled receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Members of this group form a subfamily within the class A G-protein coupled receptors (GPCRs), which includes the vasopressin and oxytocin receptors, the gonadotropin-releasing hormone receptors (GnRHRs), the neuropeptide S receptor (NPSR), and orphan GPR150. These receptors share significant sequence homology with each other, suggesting that they have a common evolutionary origin. Vasopressin, also known as arginine vasopressin or anti-diuretic hormone, is a neuropeptide synthesized in the hypothalamus. The actions of vasopressin are mediated by the interaction of this hormone with three tissue-specific subtypes: V1AR, V1BR, and V2R. Although vasopressin differs from oxytocin by only two amino acids, they have divergent physiological functions. Vasopressin is involved in regulating osmotic and cardiovascular homeostasis, whereas oxytocin plays an important role in the uterus during childbirth and in lactation. GnRHR, also known as luteinizing hormone releasing hormone receptor (LHRHR), plays an central role in vertebrate reproductive function; its activation by binding to GnRH leads to the release of follicle stimulating hormone (FSH) and luteinizing hormone (LH) from the pituitary gland. Neuropeptide S (NPS) promotes arousal and anxiolytic-like effects by activating its cognate receptor NPSR. NPSR has also been associated with asthma and allergy. GPR150 is an orphan receptor closely related to the oxytocin and vasopressin receptors.


Pssm-ID: 320117 [Multi-domain]  Cd Length: 295  Bit Score: 39.67  E-value: 1.60e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  43 LCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICytTAVVPLMLSNIFGA--QKTISLAGCGAQMFFFVTLGSTDCFLLA 120
Cdd:cd14986   15 LVGNGLVILVLRRKRKKRSRVNIFILNLAIADLV--VAFFTVLTQIIWEAtgEWVAGDVLCRIVKYLQVVGLFASTYILV 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 121 IMAYDRYVAICHPLhyTLIMTRKLCAQMLVGALGLALFLSLQlTALIFTLPFCGH--RQEINHFLCDVPPvlrlacadih 198
Cdd:cd14986   93 SMSLDRYQAIVKPM--SSLKPRKRARLMIVVAWVLSFLFSIP-QLVIFVERELGDgvHQCWSSFYTPWQR---------- 159
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 302564612 199 vhQAVLYVVGILVLTIPFLLICVSYVFItCAILCIRSAEGRRRAFSTCSSHLTVVL 254
Cdd:cd14986  160 --KVYITWLATYVFVIPLIILSYCYGRI-LRTIWIRSRQKTDRPIAPTAMSCRSVS 212
7tmA_NMU-R1 cd15358
neuromedin U receptor subtype 1, member of the class A family of seven-transmembrane G ...
45-226 1.61e-03

neuromedin U receptor subtype 1, member of the class A family of seven-transmembrane G protein-coupled receptors; Neuromedin U (NMU) is a highly conserved neuropeptide with a common C-terminal heptapeptide sequence (FLFRPRN-amide) found at the highest levels in the gastrointestinal tract and pituitary gland of mammals. Disruption or replacement of residues in the conserved heptapeptide region can result in the reduced ability of NMU to stimulate smooth-muscle contraction. Two G-protein coupled receptor subtypes, NMU-R1 and NMU-R2, with a distinct expression pattern, have been identified to bind NMU. NMU-R1 is expressed primarily in the peripheral nervous system, while NMU-R2 is mainly found in the central nervous system. Neuromedin S, a 36 amino-acid neuropeptide that shares a conserved C-terminal heptapeptide sequence with NMU, is a highly potent and selective NMU-R2 agonist. Pharmacological studies have shown that both NMU and NMS inhibit food intake and reduce body weight, and that NMU increases energy expenditure.


Pssm-ID: 320480 [Multi-domain]  Cd Length: 305  Bit Score: 39.75  E-value: 1.61e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  45 GNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPL----MLSN---IFGAqktislAGCGAQMFFFVTLGSTDCF 117
Cdd:cd15358   17 GNGLTCIVILRHKVMRTPTNYYLFSLAVSDLLVLLLGMPLelyeMWSNypfLLGA------GGCYFKTLLFETVCFASIL 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 118 LLAIMAYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQLTAL--IFTLP-FCGHRQEINHFLCDVPPVLrlac 194
Cdd:cd15358   91 NVTALSVERYIAVVHPLKAKYVVTRTHAKRVIGAVWVVSILCSIPNTSLhgIFQLTvPCRGPVPDSATCMLVKPRW---- 166
                        170       180       190
                 ....*....|....*....|....*....|..
gi 302564612 195 adihVHQAVLYVVGILVLTIPFLLICVSYVFI 226
Cdd:cd15358  167 ----MYNLIIQITTLLFFFLPMGTISVLYLLI 194
7tmA_5-HT4 cd15056
serotonin receptor subtype 4, member of the class A family of seven-transmembrane G ...
41-160 1.84e-03

serotonin receptor subtype 4, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT4 subtype is a member of the serotonin receptor family that belongs to the class A G protein-coupled receptors, and binds the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the mammalian central nervous system (CNS). 5-HT4 receptors are selectively linked to G proteins of the G(s) family, which positively stimulate adenylate cyclase, causing cAMP formation and activation of protein kinase A. 5-HT4 receptor-specific agonists have been shown to enhance learning and memory in animal studies. Moreover, hippocampal 5-HT4 receptor expression has been reported to be inversely correlated with memory performance in humans. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320184 [Multi-domain]  Cd Length: 294  Bit Score: 39.39  E-value: 1.84e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  41 MILCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPlmlsniFGAQKTISLAGCGAQMF------FFVTLGST 114
Cdd:cd15056   13 LTILGNLLVIVAVCTDRQLRKKTNYFVVSLAVADLLVAVLVMP------FGAIELVNNRWIYGETFclvrtsLDVLLTTA 86
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*..
gi 302564612 115 DCFLLAIMAYDRYVAIC-HPLHYTliMTRKLCAQMLVGALGLALFLS 160
Cdd:cd15056   87 SIMHLCCIALDRYYAICcQPLVYK--MTPLRVAVMLGGCWVIPTFIS 131
7tmA_TAAR2_3_4 cd15312
trace amine-associated receptors 2, 3, 4, and similar receptors, member of the class A family ...
109-150 1.86e-03

trace amine-associated receptors 2, 3, 4, and similar receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; TAAR2, TAAR3, and TAAR4 are among the 15 identified trace amine-associated receptor subtypes, which form a distinct subfamily within the class A G protein-coupled receptor family. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320437 [Multi-domain]  Cd Length: 289  Bit Score: 39.26  E-value: 1.86e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 302564612 109 VTLGSTDCFLLAIMAYDRYVAICHPLHYTLIMTRKLCAQMLV 150
Cdd:cd15312   81 MMLSTTSIFHLCFIAVDRYYAVCDPLHYRTKITTPVIKVFLV 122
7tmA_CCK_R cd15206
cholecystokinin receptors, member of the class A family of seven-transmembrane G ...
41-231 1.88e-03

cholecystokinin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Cholecystokinin receptors (CCK-AR and CCK-BR) are a group of G-protein coupled receptors which bind the peptide hormones cholecystokinin (CCK) or gastrin. CCK, which facilitates digestion in the small intestine, and gastrin, a major regulator of gastric acid secretion, are highly similar peptides. Like gastrin, CCK is a naturally-occurring linear peptide that is synthesized as a preprohormone, then proteolytically cleaved to form a family of peptides with the common C-terminal sequence (Gly-Trp-Met-Asp-Phe-NH2), which is required for full biological activity. CCK-AR (type A, alimentary; also known as CCK1R) is found abundantly on pancreatic acinar cells and binds only sulfated CCK-peptides with very high affinity, whereas CCK-BR (type B, brain; also known as CCK2R), the predominant form in the brain and stomach, binds CCK or gastrin and discriminates poorly between sulfated and non-sulfated peptides. CCK is implicated in regulation of digestion, appetite control, and body weight, and is involved in neurogenesis via CCK-AR. There is some evidence to support that CCK and gastrin, via their receptors, are involved in promoting cancer development and progression, acting as growth and invasion factors.


Pssm-ID: 320334 [Multi-domain]  Cd Length: 269  Bit Score: 39.30  E-value: 1.88e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  41 MILCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEI-----CYTTAVVPLMLSN-IFGAqktislAGCGAQMFFFVTLGST 114
Cdd:cd15206   13 LAVVGNILVIVTLVQNKRMRTVTNVFLLNLAVSDLllavfCMPFTLVGQLLRNfIFGE------VMCKLIPYFQAVSVSV 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 115 DCFLLAIMAYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLS---LQLTALIFTLPFCGHRqeinhflcdvppvLR 191
Cdd:cd15206   87 STFTLVAISLERYFAICHPLKSRVWQTLSHAYKVIAGIWLLSFLIMspiLVFSNLIPMSRPGGHK-------------CR 153
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|
gi 302564612 192 LACADIHVHQAVLYVVGILVLTIPFLLICVSYVFITCAIL 231
Cdd:cd15206  154 EVWPNEIAEQAWYVFLDLMLLVIPGLVMSVAYGLISWTLL 193
7tmA_Adenosine_R_A2A cd15068
adenosine receptor subtype A2A, member of the class A family of seven-transmembrane G ...
45-141 2.22e-03

adenosine receptor subtype A2A, member of the class A family of seven-transmembrane G protein-coupled receptors; The A2A receptor, a member of the adenosine receptor family of G protein-coupled receptors, binds adenosine as its endogenous ligand and is involved in regulating myocardial oxygen consumption and coronary blood flow. High-affinity A2A and low-affinity A2B receptors are preferentially coupled to G proteins of the stimulatory (Gs) family, which lead to activation of adenylate cyclase and thereby increasing the intracellular cAMP levels. The A2A receptor activation protects against tissue injury and acts as anti-inflammatory agent. In human skin endothelial cells, activation of A2B receptor, but not the A2A receptor, promotes angiogenesis. Alternatively, activated A2A receptor, but not the A2B receptor, promotes angiogenesis in human umbilical vein and lung microvascular endothelial cells. The A2A receptor alters cardiac contractility indirectly by modulating the anti-adrenergic effect of A1 receptor, while the A2B receptor exerts direct effects on cardiac contractile function, but does not modulate beta-adrenergic or A1 anti-adrenergic effects.


Pssm-ID: 320196 [Multi-domain]  Cd Length: 293  Bit Score: 39.15  E-value: 2.22e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  45 GNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVP--LMLSNIFGAqktiSLAGCGAQMFFFVTLGSTDCFLLAIM 122
Cdd:cd15068   17 GNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPfaITISTGFCA----ACHGCLFIACFVLVLTQSSIFSLLAI 92
                         90
                 ....*....|....*....
gi 302564612 123 AYDRYVAICHPLHYTLIMT 141
Cdd:cd15068   93 AIDRYIAIRIPLRYNGLVT 111
7tmA_SREB3_GPR173 cd15217
super conserved receptor expressed in brain 3 (or GPR173), member of the class A family of ...
43-161 2.81e-03

super conserved receptor expressed in brain 3 (or GPR173), member of the class A family of seven-transmembrane G protein-coupled receptors; The SREB (super conserved receptor expressed in brain) subfamily consists of at least three members, named SREB1 (GPR27), SREB2 (GPR85), and SREB3 (GPR173). They are very highly conserved G protein-coupled receptors throughout vertebrate evolution, however no endogenous ligands have yet been identified. SREB2 is greatly expressed in brain regions involved in psychiatric disorders and cognition, such as the hippocampal dentate gyrus. Genetic studies in both humans and mice have shown that SREB2 influences brain size and negatively regulates hippocampal adult neurogenesis and neurogenesis-dependent cognitive function, all of which are suggesting a potential link between SREB2 and schizophrenia. All three SREB genes are highly expressed in differentiated hippocampal neural stem cells. Furthermore, all GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320345 [Multi-domain]  Cd Length: 329  Bit Score: 38.78  E-value: 2.81e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  43 LCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNI-FGAQKTISLAGCGAQMFFFVTLGSTDCFLLAI 121
Cdd:cd15217   15 LAGNLIVSLLVLKDRALHKAPYYFLLDLCLADTIRSAVCFPFVLVSIrNGSAWTYSVLSCKIVAFMAVLFCFHAAFMLFC 94
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|
gi 302564612 122 MAYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSL 161
Cdd:cd15217   95 ISVTRYMAIAHHRFYSKRMTFWTCIAVICMVWTLSVAMAF 134
7tmA_Glyco_hormone_R cd15136
glycoprotein hormone receptors, member of the class A family of seven-transmembrane G ...
45-230 2.91e-03

glycoprotein hormone receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The glycoprotein hormone receptors (GPHRs) are seven transmembrane domain receptors with a very large extracellular N-terminal domain containing many leucine-rich repeats responsible for hormone recognition and binding. The glycoprotein hormone family includes three gonadotropins: luteinizing hormone (LH), follicle-stimulating hormone (FSH), chorionic gonadotropin (CG) and a pituitary thyroid-stimulating hormone (TSH). The glycoprotein hormones exert their biological functions by interacting with their cognate GPCRs. Both LH and CG bind to the same receptor, the luteinizing hormone-choriogonadotropin receptor (LHCGR); FSH binds to FSH-R and TSH to TSH-R. GPHRs couple primarily to the G(s)-protein and promotes cAMP production, but also to the G(i)- or G(q)-protein.


Pssm-ID: 320264 [Multi-domain]  Cd Length: 275  Bit Score: 38.74  E-value: 2.91e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  45 GNTAIIWVVCTRSTLRTPMYFFLSNLSFLEIC-----YTTAVVPLMLSNIFG--AQKTISLAGCGAQMFFFVTLGSTDCF 117
Cdd:cd15136   17 GNIIVLLVLLTSRTKLTVPRFLMCNLAFADFCmgiylGLLAIVDAKTLGEYYnyAIDWQTGAGCKTAGFLAVFSSELSVF 96
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 118 LLAIMAYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSlqltalifTLPFCGhrqeINHFlCDVPPVLRLACADI 197
Cdd:cd15136   97 TLTVITLERWYAITHAMHLNKRLSLRQAAIIMLGGWIFALIMA--------LLPLVG----VSSY-SKTSICLPFETETP 163
                        170       180       190
                 ....*....|....*....|....*....|....
gi 302564612 198 HvhqAVLYVVGILVLT-IPFLLICVSYVFITCAI 230
Cdd:cd15136  164 V---SKAYVIFLLLFNgLAFLIICGCYIKIYLSV 194
7tmA_HCAR-like cd14991
hydroxycarboxylic acid receptors and related proteins, member of the class A family of ...
43-295 3.18e-03

hydroxycarboxylic acid receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes the hydroxycarboxylic acid receptors (HCARs) as well as their closely related receptors, GPR31 and oxoeicosanoid receptor 1 (OXER1). HCARs are members of the class A family of G-protein coupled receptors (GPCRs). HCAR subfamily contain three receptor subtypes: HCAR1, HCAR2, and HCAR3. The endogenous ligand of HCAR1 (also known as lactate receptor 1, GPR104, or GPR81) is L-lactic acid. The endogenous ligands of HCAR2 (also known as niacin receptor 1, GPR109A, nicotinic acid receptor) and HCAR3 (also known as niacin receptor 2, orGPR109B) are 3-hydroxybutyric acid and 3-hydroxyoctanoic acid, respectively. All three HCA receptors are expressed in adipocytes, and are coupled to G(i)-proteins mediating anti-lipolytic effects in fat cells. OXER1 is a receptor for eicosanoids and polyunsaturated fatty acids such as 5-oxo-6E,8Z,11Z,14Z-eicosatetraenoic acid (5-OXO-ETE), 5(S)-hydroperoxy-6E,8Z,11Z,14Z-eicosatetraenoic acid (5(S)-HPETE) and arachidonic acid, whereas GPR31 is a high-affinity receptor for 12-(S)-hydroxy-5,8,10,14-eicosatetraenoic acid (12-S-HETE).


Pssm-ID: 320122 [Multi-domain]  Cd Length: 280  Bit Score: 38.58  E-value: 3.18e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  43 LCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVvPLMLSNIFGAQKTI-SLAGCGAQMFFFVTLGSTDCFLLAI 121
Cdd:cd14991   15 LPGNVVALWIFCFHSRTWKANTVYLFNLVLADFLLLICL-PFRIDYYLRGEHWIfGEAWCRVNLFMLSVNRSASIAFLTA 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 122 MAYDRYVAICHPLHYTLIMTRKLcAQMLVGALgLALFLSLQLTALIFTLPfcghRQEINHFLCDVPPVLRLACADIHVHQ 201
Cdd:cd14991   94 VALDRYFKVVHPHHRVNRMSVKA-AAGVAGLL-WALVLLLTLPLLLSTLL----TVNSNKSSCHSFSSYTKPSLSIRWHN 167
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 202 AVLyvvgILVLTIPFLLICVSYVFITCAiLCIRSAEGRRRAFSTCSSHLTVVLLQYGCC----------SLVYLRPRSST 271
Cdd:cd14991  168 ALF----LLEFFLPLGLIVFCSVRIACN-LRIRQSLGKQARVQRAIRLVFLVVIVFVLCflpsiiagllALVFKNLGSCR 242
                        250       260
                 ....*....|....*....|....*..
gi 302564612 272 SEDEDRQ---IALVYTFVTPLLNPLIY 295
Cdd:cd14991  243 CLNSVAQlfhISLAFTYLNSALDPVIY 269
7tmA_GPR135 cd15212
G protein-coupled receptor 135, member of the class A family of seven-transmembrane G ...
45-172 3.28e-03

G protein-coupled receptor 135, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR135, also known as the somatostatin- and angiotensin-like peptide receptor (SALPR), is found in various tissues including eye, brain, cervix, stomach, and testis. Pharmacological studies have shown that relaxin-3 (R3) is a high-affinity endogenous ligand for GPR135. R3 has recently been identified as a new member of the insulin/relaxin family of peptide hormones and is exclusively expressed in the brain neurons. In addition to GPR135, R3 also acts as an agonist for GPR142, a pseudogene in the rat, and can activate LGR7 (leucine repeat-containing G-protein receptor-7), which is the main receptor for relaxin-1 (R1) and relaxin-2 (R2). While R1 and R2 are hormones primarily associated with reproduction and pregnancy, R3 is involved in neuroendocrine and sensory processing. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320340 [Multi-domain]  Cd Length: 285  Bit Score: 38.60  E-value: 3.28e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  45 GNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIF-GAQKTISLAGCGAQMFFFVTLGSTDCFLLAIMA 123
Cdd:cd15212   17 GNCAVIGVIVKHRQLRTVTNAFILSLSLSDLLTALLCLPFAFLTLFsRPGWLFGDRLCLANGFFNACFGIVSTLTMTLIS 96
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*....
gi 302564612 124 YDRYVAICHPLHYTliMTRKLCAQMLVGALglalflslqLTALIFTLPF 172
Cdd:cd15212   97 FDRYYAIVRQPQGK--IGRRRALQLLAAAW---------LTALGFSLPW 134
7tmA_PAR cd15162
protease-activated receptors, member of the class A family of seven-transmembrane G ...
43-241 3.38e-03

protease-activated receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes purinergic receptor P2Y8 and protease-activated receptors. P2Y8 (or P2RY8) expression is often increased in leukemia patients, and it plays a role in the pathogenesis of acute leukemia. P2Y8 is phylogenetically closely related to the protease-activated receptors (PARs), which are activated by serine proteases such as thrombin, trypsin, and tryptase. These proteases cleave the extracellular domain of the receptor to form a new N-terminus, which in turn functions as a tethered ligand. The newly-formed tethered ligand binds intramolecularly to activate the receptor and triggers G-protein binding and intracellular signaling. Four different types of the protease-activated receptors have been identified (PAR1-4) and are predominantly expressed in platelets. PAR1, PAR3, and PAR4 are activated by thrombin, whereas PAR2 is activated by trypsin. The PARs are known to couple with several G-proteins including Gi (cAMP inhibitory), G12/13 (Rho and Ras activation), and Gq (calcium signaling) to activate downstream signaling messengers which induces numerous cellular and physiological effects.


Pssm-ID: 341328 [Multi-domain]  Cd Length: 280  Bit Score: 38.58  E-value: 3.38e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  43 LCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLAIM 122
Cdd:cd15162   15 LPANGMALWVLLFRTKKKAPAVIYMANLAIADLLLVIWLPFKIAYHIHGNNWIFGEALCRLVTVAFYGNMYCSILLLTCI 94
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 123 AYDRYVAICHPLHYTLIMTRKLcaqmlvgALGLAlfLSLQLTALIFTLPFCGHRQEInhflcDVPPVLRLACADIH---- 198
Cdd:cd15162   95 SIDRYLAIVHPMGHRRLRARRY-------ALGTC--LAIWLLALLVTLPLYLVKQTI-----FLPALDITTCHDVLpeql 160
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*.
gi 302564612 199 ---VHQAVLYVVGILVLTIPFLLICVSYVFITCAILCIRSAEGRRR 241
Cdd:cd15162  161 lvgDWFYYFLSLAIVGFLIPFILTASCYVATIRTLAALEDENSEKK 206
7tmA_GHSR-like cd15928
growth hormone secretagogue receptor, motilin receptor, and related proteins, member of the ...
43-306 3.55e-03

growth hormone secretagogue receptor, motilin receptor, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes growth hormone secretagogue receptor (GHSR or ghrelin receptor), motilin receptor (also called GPR38), and related proteins. Both GHSR and GPR38 bind peptide hormones. Ghrelin, the endogenous ligand for GHSR, is an acylated 28-amino acid peptide hormone produced by ghrelin cells in the gastrointestinal tract. Ghrelin is also called the hunger hormone and is involved in the regulation of growth hormone release, appetite and feeding, gut motility, lipid and glucose metabolism, and energy balance. Motilin, the ligand for GPR38, is a 22 amino acid peptide hormone expressed throughout the gastrointestinal tract and stimulates contraction of gut smooth muscle. It is involved in the regulation of digestive tract motility.


Pssm-ID: 320594 [Multi-domain]  Cd Length: 288  Bit Score: 38.62  E-value: 3.55e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  43 LCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEIcYTTAVVPLMLSNIFgAQKTISLAGCGAQMFFFVTLGSTDCFLLAIM 122
Cdd:cd15928   15 ASGNLLTVLVIGRSRDMRTTTNLYLSSLAVSDL-LIFLVLPLDLYRLW-RYRPWRFGDLLCRLMYFFSETCTYASILHIT 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 123 AY--DRYVAICHPLHYTLIMTRKLcAQMLVGALGLALFLSLQLTALIFTLPFCGHRQEINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15928   93 ALsvERYLAICHPLRAKVLVTRGR-VKLLIAVIWAVAIVSAGPALVLVGVEHIQGQQTPRGFECTVVNVSSGLLSVMLWV 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 201 QAVLYVVGILVLTIPFLLICVSyVFITCAILCIRSAEGRRRAFSTCSSHLTVVLLQYGCCSLVYLRPRS--STSEDEDRQ 278
Cdd:cd15928  172 STSFFFVPMVCLSLLYGLIGRA-LWDRRQRSRTAGASRRDNNHRQTVRMLAVIVLAFVLCWLPFHVGRVifNHSRASTKH 250
                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 302564612 279 IALVYTFVTPL----------LNPLIYTLRNKDVKDAL 306
Cdd:cd15928  251 LHYVSQYFNLVsfvlfylsaaINPILYNLMSKRYRYAV 288
7tmA_CB2 cd15341
cannabinoid receptor subtype 2, member of the class A family of seven-transmembrane G ...
46-174 3.78e-03

cannabinoid receptor subtype 2, member of the class A family of seven-transmembrane G protein-coupled receptors; Cannabinoid receptors belong to the class A G-protein coupled receptor superfamily. Two types of cannabinoid receptors, CB1 and CB2, have been identified so far. They are activated by naturally occurring endocannabinoids, cannabis plant-derived cannabinoids such as tetrahydrocannabinol, or synthetic cannabinoids. The CB receptors are involved in the various physiological processes such as appetite, mood, memory, and pain sensation. CB1 receptor is expressed predominantly in central and peripheral neurons, while CB2 receptor is found mainly in the immune system.


Pssm-ID: 320463 [Multi-domain]  Cd Length: 279  Bit Score: 38.28  E-value: 3.78e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  46 NTAIIWVVCTRSTLR-TPMYFFLSNLSFLE----ICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGStdcflLA 120
Cdd:cd15341   18 NVAVLYLILSSPKLRrKPSYLFIGSLALADflasVVFACSFVDFHVFHGVDSSAIFLLKLGGVTMSFTASLGS-----LL 92
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....
gi 302564612 121 IMAYDRYVAICHPLHYTLIMTRKLCAqmlvgalgLALFLSLQLTALIFTLPFCG 174
Cdd:cd15341   93 LMAFDRYVCIYYPSEYKALVTRKRAL--------VALAVMWVLTALIAYLPLMG 138
7tmA_D2-like_dopamine_R cd15053
D2-like dopamine receptors, member of the class A family of seven-transmembrane G ...
41-136 4.30e-03

D2-like dopamine receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Dopamine receptors are members of the class A G protein-coupled receptors that are involved in many neurological processes in the central nervous system (CNS). The neurotransmitter dopamine is the primary endogenous agonist for dopamine receptors. Dopamine receptors consist of at least five subtypes: D1, D2, D3, D4, and D5. The D1 and D5 subtypes are members of the D1-like family of dopamine receptors, whereas the D2, D3 and D4 subtypes are members of the D2-like family. The D1-like family receptors are coupled to G proteins of the G(s) family, which activate adenylate cyclase, causing cAMP formation and activation of protein kinase A. In contrast, activation of D2-like family receptors is linked to G proteins of the G(i) family, which inhibit adenylate cyclase. Dopamine receptors are major therapeutic targets for neurological and psychiatric disorders such as drug abuse, depression, schizophrenia, or Parkinson's disease.


Pssm-ID: 320181 [Multi-domain]  Cd Length: 263  Bit Score: 38.10  E-value: 4.30e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  41 MILCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLML-SNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLL 119
Cdd:cd15053   13 LTVFGNVLVIMSVFRERSLQTATNYFIVSLAVADLLVAILVMPFAVyVEVNGGKWYLGPILCDIYIAMDVMCSTASIFNL 92
                         90
                 ....*....|....*..
gi 302564612 120 AIMAYDRYVAICHPLHY 136
Cdd:cd15053   93 CAISIDRYIAVTQPIKY 109
7tmA_alpha2C_AR cd15323
alpha-2 adrenergic receptors subtype C, member of the class A family of seven-transmembrane G ...
43-150 4.69e-03

alpha-2 adrenergic receptors subtype C, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-2 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that have a key role in neurotransmitter release: alpha-2A, alpha-2B, and alpha-2C. In addition, a fourth subtype, alpha-2D is present in ray-finned fishes and amphibians, but is not found in humans. The alpha-2 receptors are found in both central and peripheral nervous system and serve to produce inhibitory functions through the G(i) proteins. Thus, the alpha-2 receptors inhibit adenylate cyclase, which decreases cAMP production and thereby decreases calcium influx during the action potential. Consequently, lowered levels of calcium will lead to a decrease in neurotransmitter release by negative feedback.


Pssm-ID: 320446 [Multi-domain]  Cd Length: 261  Bit Score: 37.99  E-value: 4.69e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  43 LCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLAIM 122
Cdd:cd15323   15 IVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMGYWYFGQVWCNIYLALDVLFCTSSIVHLCAI 94
                         90       100
                 ....*....|....*....|....*...
gi 302564612 123 AYDRYVAICHPLHYTLIMTRKLCAQMLV 150
Cdd:cd15323   95 SLDRYWSVTQAVEYNLKRTPRRVKAIIV 122
PHA03087 PHA03087
G protein-coupled chemokine receptor-like protein; Provisional
43-143 5.12e-03

G protein-coupled chemokine receptor-like protein; Provisional


Pssm-ID: 222976 [Multi-domain]  Cd Length: 335  Bit Score: 38.22  E-value: 5.12e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  43 LCGNTAIIwVVCTRSTLRTPMYFFLSNLSFLEICYTtAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLAIM 122
Cdd:PHA03087  55 LVGNIIVI-YVLTKTKIKTPMDIYLLNLAVSDLLFV-MTLPFQIYYYILFQWSFGEFACKIVSGLYYIGFYNSMNFITVM 132
                         90       100
                 ....*....|....*....|.
gi 302564612 123 AYDRYVAICHPLHYTLIMTRK 143
Cdd:PHA03087 133 SVDRYIAIVHPVKSNKINTVK 153
7tmA_alpha1A_AR cd15325
alpha-1 adrenergic receptors subtype A, member of the class A family of seven-transmembrane G ...
45-157 5.19e-03

alpha-1 adrenergic receptors subtype A, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-1 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that primarily mediate smooth muscle contraction: alpha-1A, alpha-1B, and alpha-1D. Activation of alpha-1 receptors by catecholamines such as norepinephrine and epinephrine couples to the G(q) protein, which then activates the phospholipase C pathway, leading to an increase in IP3 and calcium. Consequently, the elevation of intracellular calcium concentration leads to vasoconstriction in smooth muscle of blood vessels. In addition, activation of alpha-1 receptors by phenylpropanolamine (PPA) produces anorexia and may induce appetite suppression in rats.


Pssm-ID: 320448 [Multi-domain]  Cd Length: 261  Bit Score: 37.95  E-value: 5.19e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  45 GNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLmlSNIFGAQKTISLAG--CGAQMFFFVTLGSTDCFLLAIM 122
Cdd:cd15325   17 GNILVILSVACHRHLQTVTHYFIVNLAVADLLLTSTVLPF--SAIFEILGYWAFGRvfCNIWAAVDVLCCTASIMSLCII 94
                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 302564612 123 AYDRYVAICHPLHYTLIMTRK--LCAQMLVGALGLAL 157
Cdd:cd15325   95 SIDRYIGVSYPLRYPSIMTERrgLLALLCVWVLSLVI 131
7tmA_OXR cd15208
orexin receptors, member of the class A family of seven-transmembrane G protein-coupled ...
43-226 5.35e-03

orexin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Orexins (OXs, also referred to as hypocretins) are neuropeptide hormones that regulate the sleep-wake cycle and potently influence homeostatic systems regulating appetite and feeding behavior or modulating emotional responses such as anxiety or panic. OXs are synthesized as prepro-orexin (PPO) in the hypothalamus and then proteolytically cleaved into two forms of isoforms: orexin-A (OX-A) and orexin-B (OX-B). OXA is a 33 amino-acid peptide with N-terminal pyroglutamyl residue and two intramolecular disulfide bonds, whereas OXB is a 28 amino-acid linear peptide with no disulfide bonds. OX-A binds orexin receptor 1 (OX1R) with high-affinity, but also binds with somewhat low-affinity to OX2R, and signals primarily to Gq coupling, whereas OX-B shows a strong preference for the orexin receptor 2 (OX2R) and signals through Gq or Gi/o coupling. Thus, activation of OX1R or OX2R will activate phospholipase activity and the phosphatidylinositol and calcium signaling pathways. Additionally, OX2R activation can also lead to inhibition of adenylate cyclase.


Pssm-ID: 320336 [Multi-domain]  Cd Length: 303  Bit Score: 38.14  E-value: 5.35e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  43 LCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLsnIFGAQKTISL--AGCGAQMFFFVTLGSTDCFLLA 120
Cdd:cd15208   15 LVGNVLVCFAVWRNHHMRTVTNYFIVNLSLADFLVIIICLPATL--LVDVTETWFFgqVLCKIIPYLQTVSVSVSVLTLS 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 121 IMAYDRYVAICHPLHYTLimTRKLCAQMLVGALGLALFLSLQLTALIFTLPFCGHRQEINHFL-CDvppvlrlACADIHV 199
Cdd:cd15208   93 CIALDRWYAICHPLMFKS--TAKRARVSILIIWIVSLLIMIPQAIVMECSRVVPLANKTILLTvCD-------ERWSDSI 163
                        170       180
                 ....*....|....*....|....*...
gi 302564612 200 HQAVLYVVGILVL-TIPFLLICVSYVFI 226
Cdd:cd15208  164 YQKVYHICFFLVTyLLPLCLMILAYFQI 191
7tmA_Octopamine_R cd15063
octopamine receptors in invertebrates, member of the class A family of seven-transmembrane G ...
41-159 5.42e-03

octopamine receptors in invertebrates, member of the class A family of seven-transmembrane G protein-coupled receptors; G-protein coupled receptor for octopamine (OA), which functions as a neurotransmitter, neurohormone, and neuromodulator in invertebrate nervous system. Octopamine (also known as beta, 4-dihydroxyphenethylamine) is an endogenous trace amine that is highly similar to norepinephrine, but lacks a hydroxyl group, and has effects on the adrenergic and dopaminergic nervous systems. Based on the pharmacological and signaling profiles, the octopamine receptors can be classified into at least two groups: OA1 receptors elevate intracellular calcium levels in muscle, whereas OA2 receptors activate adenylate cyclase and increase cAMP production.


Pssm-ID: 320191 [Multi-domain]  Cd Length: 266  Bit Score: 37.86  E-value: 5.42e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  41 MILCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSN------IFGAqktislAGCGAQMFFFVTLGST 114
Cdd:cd15063   13 LVVLGNLLVIAAVLCSRKLRTVTNLFIVSLACADLLVGTLVLPFSAVNevldvwIFGH------TWCQIWLAVDVWMCTA 86
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*
gi 302564612 115 DCFLLAIMAYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFL 159
Cdd:cd15063   87 SILNLCAISLDRYLAITRPIRYPSLMSTKRAKCLIAGVWVLSFVI 131
7tmA_NK1R cd16002
neurokinin 1 receptor, member of the class A family of seven-transmembrane G protein-coupled ...
43-141 5.48e-03

neurokinin 1 receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The neurokinin 1 receptor (NK1R), also known as tachykinin receptor 1 (TACR1) or substance P receptor (SPR), is a G-protein coupled receptor found in the mammalian central nervous and peripheral nervous systems. The tachykinins act as excitatory transmitters on neurons and cells in the gastrointestinal tract. The TKs are characterized by a common five-amino acid C-terminal sequence, Phe-X-Gly-Leu-Met-NH2, where X is a hydrophobic residue. The three major mammalian tachykinins are substance P (SP), neurokinin A (NKA), and neurokinin B (NKB). The physiological actions of tachykinins are mediated through three types of receptors: neurokinin receptor type 1 (NK1R), NK2R, and NK3R. SP is a high-affinity endogenous ligand for NK1R, which interacts with the Gq protein and activates phospholipase C, leading to elevation of intracellular calcium. SP is an extremely potent vasodilator through endothelium dependent mechanism and is released from the autonomic sensory nerves. NK2R is a high-affinity receptor for NKA, the tachykinin neuropeptide substance K. SP and NKA are found in the enteric nervous system and mediate in the regulation of gastrointestinal motility, secretion, vascular permeability, and pain perception.


Pssm-ID: 320668 [Multi-domain]  Cd Length: 284  Bit Score: 37.92  E-value: 5.48e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  43 LCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLAIM 122
Cdd:cd16002   15 VVGNIIVMWIILAHKRMRTVTNYFLVNLAFAEASMSAFNTVINFTYAIHNEWYYGLEYCKFHNFFPIAAVFASIYSMTAI 94
                         90
                 ....*....|....*....
gi 302564612 123 AYDRYVAICHPLHYTLIMT 141
Cdd:cd16002   95 ALDRYMAIIHPLQPRLSAT 113
7tmA_5-HT1F cd15334
serotonin receptor subtype 1F, member of the class A family of seven-transmembrane G ...
46-307 6.74e-03

serotonin receptor subtype 1F, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT1 receptors, one of 14 mammalian 5-HT receptors, is a member of the class A of GPCRs and is activated by the endogenous neurotransmitter and peripheral signal mediator serotonin (5-hydroxytryptamine, 5-HT). The 5-HT1 receptors mediate inhibitory neurotransmission by coupling to G proteins of the G(i/o) family, which lead to a decrease in adenylate cyclase activity, thereby decreasing intracellular cAMP levels and calcium influx. The 5-HT1 receptor subfamily includes 5 subtypes: 5-HT1A, 5-HT1B, 5-HT1D, 5-HT1E, and 5-HT1F. There is no 5-HT1C receptor subtype, as it has been reclassified as the 5-HT2C receptor. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in neurologic disorders such as migraine, schizophrenia, and depression.


Pssm-ID: 320456 [Multi-domain]  Cd Length: 259  Bit Score: 37.62  E-value: 6.74e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  46 NTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLAIMAYD 125
Cdd:cd15334   18 NSLVITAIIVTRKLHHPANYLICSLAVTDFLVAVLVMPFSIMYIVKETWIMGQVVCDIWLSVDITCCTCSILHLSAIALD 97
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 126 RYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLSLQltaliftlPFCGHRQEINHflcdvppvlRLACADIHVHQAVLY 205
Cdd:cd15334   98 RYRAITDAVEYARKRTPKHAGIMIAVVWIISIFISMP--------PLFWRHQTTSR---------EDECIIKHDHIVFTI 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 206 VVGILVLTIPFLLICVSYVFItcailcIRSAEGRRRAFSTcsshLTVVLLQYGCCSL--------VYLRPRSSTSEDEDR 277
Cdd:cd15334  161 YSTFGAFYIPLALILILYYKI------YRAATRERKAATT----LGLILGAFVICWLpffvkeviVNTCDSCYISEEMSN 230
                        250       260       270
                 ....*....|....*....|....*....|
gi 302564612 278 QIALVyTFVTPLLNPLIYTLRNKDVKDALR 307
Cdd:cd15334  231 FLTWL-GYINSLINPLIYTIFNEDFKKAFQ 259
7tmA_Ap5-HTB1-like cd15065
serotonin receptor subtypes B1 and B2 from Aplysia californica and similar proteins; member of ...
41-160 7.67e-03

serotonin receptor subtypes B1 and B2 from Aplysia californica and similar proteins; member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes Aplysia californica serotonin receptors Ap5-HTB1 and Ap5-HTB2, and similar proteins from bilateria including insects, mollusks, annelids, and worms. Ap5-HTB1 is one of the several different receptors for 5-hydroxytryptamine (5HT, serotonin). In Aplysia, serotonin plays important roles in a variety of behavioral and physiological processes mediated by the central nervous system. These include circadian clock, feeding, locomotor movement, cognition and memory, synaptic growth and synaptic plasticity. Both Ap5-HTB1 and Ap5-HTB2 receptors are coupled to G-proteins that stimulate phospholipase C, leading to the activation of phosphoinositide metabolism. Ap5-HTB1 is expressed in the reproductive system, whereas Ap5-HTB2 is expressed in the central nervous system.


Pssm-ID: 320193 [Multi-domain]  Cd Length: 300  Bit Score: 37.33  E-value: 7.67e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  41 MILCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSN------IFGAQKtislagCGAQMFFFVTLGST 114
Cdd:cd15065   12 LAIFGNVLVCLAIFTDRRLRKKSNLFIVSLAVADLLVALLVMTFAVVNdllgywLFGETF------CNIWISFDVMCSTA 85
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*.
gi 302564612 115 DCFLLAIMAYDRYVAICHPLHYTLIMTRKLCAQMLVGALGLALFLS 160
Cdd:cd15065   86 SILNLCAISLDRYIHIKKPLKYERWMTTRRALVVIASVWILSALIS 131
7tmA_Gal1_R cd15098
galanin receptor subtype 1, member of the class A family of seven-transmembrane G ...
106-223 8.29e-03

galanin receptor subtype 1, member of the class A family of seven-transmembrane G protein-coupled receptors; The G protein-coupled galanin receptors bind galanin, a neuropeptide that is widely expressed in the brain, peripheral tissues, and endocrine glands. Three receptors subtypes have been so far identified: GAL1, GAL2, and GAL3. The specific functions of each subtype remains mostly unknown, although galanin is thought to be involved in a variety of neuronal functions such as hormone release and food intake. Galanin is implicated in numerous neurological and psychiatric diseases including Alzheimer's disease, depression, eating disorders, epilepsy and stroke, among many others.


Pssm-ID: 320226 [Multi-domain]  Cd Length: 282  Bit Score: 37.40  E-value: 8.29e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 106 FFFVTLGSTDCFLLAIMAYDRYVAICHPLHYTLIMTRK--LCAQMLVGALGLALFLSLQLTALIFTlpfcgHRQEINHFL 183
Cdd:cd15098   80 YFFTVSMLVSIFTLVAMSVDRYIAVVHSRTSSSLRTRRnaLLGVLVIWVLSLAMASPVAVHQDLVH-----HWTASNQTF 154
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|.
gi 302564612 184 C-DVPPVLRLAcadiHVHQAVLYVVGILvltIPFLLICVSY 223
Cdd:cd15098  155 CwENWPEKQQK----PVYVVCTFVFGYL---LPLLLITFCY 188
7tmA_Peropsin cd15073
retinal pigment epithelium-derived rhodopsin homolog, member of the class A family of ...
43-161 8.79e-03

retinal pigment epithelium-derived rhodopsin homolog, member of the class A family of seven-transmembrane G protein-coupled receptors; Peropsin, also known as a retinal pigment epithelium-derived rhodopsin homolog (RRH), is a visual pigment-like protein found exclusively in the apical microvilli of the retinal pigment epithelium. Peropsin belongs to the type 2 opsin family of the class A G-protein coupled receptors. Peropsin presumably plays a physiological role in the retinal pigment epithelium either by detecting light directly or monitoring the levels of retinoids, the primary light absorber in visual perception, or other pigment-related compounds in the eye.


Pssm-ID: 320201 [Multi-domain]  Cd Length: 280  Bit Score: 37.41  E-value: 8.79e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  43 LCGNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLAIM 122
Cdd:cd15073   15 TISNGIVLVTFVKFRELRTPTNALIINLAVTDLGVSIIGYPFSAASDLHGSWKFGYAGCQWYAFLNIFFGMASIGLLTVV 94
                         90       100       110
                 ....*....|....*....|....*....|....*....
gi 302564612 123 AYDRYVAICHPLHYTLiMTRKLCAQMLVGALGLALFLSL 161
Cdd:cd15073   95 AVDRYLTICRPDLGRK-MTTNTYTVMILLAWTNAFFWAA 132
7tmA_PSP24-like cd15213
G protein-coupled receptor PSP24 and similar proteins, member of the class A family of ...
45-305 9.70e-03

G protein-coupled receptor PSP24 and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes two human orphan receptors, GPR45 and GPR65, and their closely related proteins found in vertebrates and invertebrates. GPR45 and GPR 65 are also called PSP24-alpha (or PSP24-1) and PSP24-beta (or PSP24-2) in other vertebrates, respectively. These receptors exhibit the highest sequence homology to each other. PSP24 was originally identified as a novel, high-affinity lysophosphatidic acid (LPA) receptor in Xenopus laevis oocytes; however, PSP24 receptors (GPR45 and GPR63) have not been shown to be activated by LPA. Instead, sphingosine 1-phosphate and dioleoylphosphatidic acid have been shown to act as low affinity agonists for GPR63. PSP24 receptors are highly expressed in neuronal cells of cerebellum and their expression level remains constant from the early embryonic stages to adulthood, suggesting the important role of PSP24s in brain neuronal functions. Members of this subgroup contain the highly conserved Asp-Arg-Tyr/Phe (DRY/F) motif found in the third transmembrane helix (TM3) of the rhodopsin-like class A receptors which is important for efficient G protein-coupled signal transduction. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320341 [Multi-domain]  Cd Length: 262  Bit Score: 36.96  E-value: 9.70e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612  45 GNTAIIWVVCTRSTLRTPMYFFLSNLSFLEICYTTAVVPLMLSNIFGAQKTISLAGCGAQMFFFVTLGSTDCFLLAIMAY 124
Cdd:cd15213   17 GNSIVCLIVYQKPAMRSAINLLLANLAFSDIMLSLVCMPFAAVTIITGRWIFGDIFCRISAMLYWFFVLEGVAILLIISV 96
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 125 DRYVAICHPLHYTLIMTRKLcaqMLVGALGLALFLSL------QLTALIFTLPFCghrqeinhflcdvppVLRLACADIH 198
Cdd:cd15213   97 DRYLIIVQRQDKLNPHRAKI---LIAVSWVLSFCVSFpplvgwGKYEFPPRAPQC---------------VLGYTESPAD 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302564612 199 VHQAVLYVVgiLVLTIPFLLICVSYVFItcaILCIRSAegRRRAFSTC---SSHLTVVLLQYGCCSLVYLRPRSSTSEDE 275
Cdd:cd15213  159 RIYVVLLLV--AVFFIPFLIMLYSYFCI---LNTVRSF--KTRAFTTIlilFIGFSVCWLPYTVYSLLSVFSRYSSSFYV 231
                        250       260       270
                 ....*....|....*....|....*....|
gi 302564612 276 DRQIALVYTFVTPLLNPLIYTLRNKDVKDA 305
Cdd:cd15213  232 ISTCLLWLSYLKSAFNPVIYCWRIKKFREA 261
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH