NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|301069372|ref|NP_001180274|]
View 

protein BRAWNIN precursor [Macaca mulatta]

Protein Classification

DUF4516 domain-containing protein( domain architecture ID 10633188)

DUF4516 domain-containing protein similar to Homo sapiens protein C12orf73

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
DUF4516 pfam14990
Domain of unknown function (DUF4516); This family of proteins is found in eukaryotes. Proteins ...
 1-46 3.76e-20

Domain of unknown function (DUF4516); This family of proteins is found in eukaryotes. Proteins in this family are typically between 56 and 69 amino acids in length.


:

Pssm-ID: 464425  Cd Length: 46  Bit Score: 74.73  E-value: 3.76e-20
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*.
gi 301069372   1 MPAGVPMFTYLKMLTASLLAMCAGAEVVHRYYRPELTIPEIPPKPG 46
Cdd:pfam14990  1 MPAGVSWGQYLTFLGASVLSMFAGAQVVHNYYKPDLTIPPIPPKEG 46
 
Name Accession Description Interval E-value
DUF4516 pfam14990
Domain of unknown function (DUF4516); This family of proteins is found in eukaryotes. Proteins ...
 1-46 3.76e-20

Domain of unknown function (DUF4516); This family of proteins is found in eukaryotes. Proteins in this family are typically between 56 and 69 amino acids in length.


Pssm-ID: 464425  Cd Length: 46  Bit Score: 74.73  E-value: 3.76e-20
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*.
gi 301069372   1 MPAGVPMFTYLKMLTASLLAMCAGAEVVHRYYRPELTIPEIPPKPG 46
Cdd:pfam14990  1 MPAGVSWGQYLTFLGASVLSMFAGAQVVHNYYKPDLTIPPIPPKEG 46
 
Name Accession Description Interval E-value
DUF4516 pfam14990
Domain of unknown function (DUF4516); This family of proteins is found in eukaryotes. Proteins ...
 1-46 3.76e-20

Domain of unknown function (DUF4516); This family of proteins is found in eukaryotes. Proteins in this family are typically between 56 and 69 amino acids in length.


Pssm-ID: 464425  Cd Length: 46  Bit Score: 74.73  E-value: 3.76e-20
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*.
gi 301069372   1 MPAGVPMFTYLKMLTASLLAMCAGAEVVHRYYRPELTIPEIPPKPG 46
Cdd:pfam14990  1 MPAGVSWGQYLTFLGASVLSMFAGAQVVHNYYKPDLTIPPIPPKEG 46
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH