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Conserved domains on  [gi|261244931|ref|NP_001159644|]
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late cornified envelope protein 6A [Mus musculus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
LCE6A pfam15858
Late cornified envelope protein 6A family; LCE6A is a family of proteins is found in mammals. ...
 1-81 7.04e-36

Late cornified envelope protein 6A family; LCE6A is a family of proteins is found in mammals. It was identified in a large-scale screening experiment as being involved in the barrier function of the epidermis.


:

Pssm-ID: 464909  Cd Length: 81  Bit Score: 116.00  E-value: 7.04e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261244931   1 MSQQKPQLSELPNAPIYSPPKGPNLSLSTCSTSCGTSCSAGCSSYSKRLRLQNTVSHKEIHHPQPRCLRGSTTYHCKEEE 80
Cdd:pfam15858  1 MSQQKPQLSELPNAPICSPPKGPNLCLAPCSTPCGAPCSAGCHSSSKRLELQKPVSHKEAHHPKLRCLRGGTIYHCKEEE 80


                 .
gi 261244931  81 C 81
Cdd:pfam15858 81 C 81
 
Name Accession Description Interval E-value
LCE6A pfam15858
Late cornified envelope protein 6A family; LCE6A is a family of proteins is found in mammals. ...
 1-81 7.04e-36

Late cornified envelope protein 6A family; LCE6A is a family of proteins is found in mammals. It was identified in a large-scale screening experiment as being involved in the barrier function of the epidermis.


Pssm-ID: 464909  Cd Length: 81  Bit Score: 116.00  E-value: 7.04e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261244931   1 MSQQKPQLSELPNAPIYSPPKGPNLSLSTCSTSCGTSCSAGCSSYSKRLRLQNTVSHKEIHHPQPRCLRGSTTYHCKEEE 80
Cdd:pfam15858  1 MSQQKPQLSELPNAPICSPPKGPNLCLAPCSTPCGAPCSAGCHSSSKRLELQKPVSHKEAHHPKLRCLRGGTIYHCKEEE 80


                 .
gi 261244931  81 C 81
Cdd:pfam15858 81 C 81
 
Name Accession Description Interval E-value
LCE6A pfam15858
Late cornified envelope protein 6A family; LCE6A is a family of proteins is found in mammals. ...
 1-81 7.04e-36

Late cornified envelope protein 6A family; LCE6A is a family of proteins is found in mammals. It was identified in a large-scale screening experiment as being involved in the barrier function of the epidermis.


Pssm-ID: 464909  Cd Length: 81  Bit Score: 116.00  E-value: 7.04e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 261244931   1 MSQQKPQLSELPNAPIYSPPKGPNLSLSTCSTSCGTSCSAGCSSYSKRLRLQNTVSHKEIHHPQPRCLRGSTTYHCKEEE 80
Cdd:pfam15858  1 MSQQKPQLSELPNAPICSPPKGPNLCLAPCSTPCGAPCSAGCHSSSKRLELQKPVSHKEAHHPKLRCLRGGTIYHCKEEE 80


                 .
gi 261244931  81 C 81
Cdd:pfam15858 81 C 81
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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