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Conserved domains on  [gi|237858668|ref|NP_001153587|]
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UPF0235 protein C15orf40 isoform d [Homo sapiens]

Protein Classification

DUF167 domain-containing protein( domain architecture ID 10495619)

DUF167 domain-containing protein similar to Homo sapiens UPF0235 protein C15orf40

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF167 pfam02594
Uncharacterized ACR, YggU family COG1872;
63-122 2.47e-20

Uncharacterized ACR, YggU family COG1872;


:

Pssm-ID: 460608  Cd Length: 75  Bit Score: 79.77  E-value: 2.47e-20
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 237858668   63 VTIAIHAKPGSKQNAVT--DLTAEAVNVAIAAPPSEGEANAELCRYLSKVLELRKSDVVLDK 122
Cdd:pfam02594   2 VILAVRVKPGAKRDAIGggAVGRGALKVRVAAPPVDGKANAALIEFLAKALGVPKSDVSIVS 63
 
Name Accession Description Interval E-value
DUF167 pfam02594
Uncharacterized ACR, YggU family COG1872;
63-122 2.47e-20

Uncharacterized ACR, YggU family COG1872;


Pssm-ID: 460608  Cd Length: 75  Bit Score: 79.77  E-value: 2.47e-20
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 237858668   63 VTIAIHAKPGSKQNAVT--DLTAEAVNVAIAAPPSEGEANAELCRYLSKVLELRKSDVVLDK 122
Cdd:pfam02594   2 VILAVRVKPGAKRDAIGggAVGRGALKVRVAAPPVDGKANAALIEFLAKALGVPKSDVSIVS 63
YggU COG1872
Uncharacterized conserved protein YggU, UPF0235/DUF167 family [Function unknown];
60-120 2.14e-16

Uncharacterized conserved protein YggU, UPF0235/DUF167 family [Function unknown];


Pssm-ID: 441476  Cd Length: 81  Bit Score: 69.74  E-value: 2.14e-16
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 237858668  60 KGCVTIAIHAKPGSKQNAVTDLTAEAVNVAIAAPPSEGEANAELCRYLSKVLELRKSDVVL 120
Cdd:COG1872    8 GDGLILAVRVQPGASRDAIVGVHGGALKVRVTAPPVDGKANAALIKLLAKALGVPKSRVEI 68
PRK05090 PRK05090
hypothetical protein; Validated
 65-122 9.19e-09

hypothetical protein; Validated


Pssm-ID: 179931  Cd Length: 95  Bit Score: 50.31  E-value: 9.19e-09
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 237858668  65 IAIHAKPGSKQNAVTDLTAEAVNVAIAAPPSEGEANAELCRYLSKVLELRKSDVVLDK 122
Cdd:PRK05090  13 LRLYIQPKASRDQIVGLHGDELKVAITAPPVDGQANAHLLKFLAKQFRVAKSQVVIEK 70
TIGR00251 TIGR00251
TIGR00251 family protein; [Hypothetical proteins, Conserved]
 63-122 3.55e-06

TIGR00251 family protein; [Hypothetical proteins, Conserved]


Pssm-ID: 129353  Cd Length: 87  Bit Score: 43.27  E-value: 3.55e-06
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 237858668   63 VTIAIHAKPGSKQNAVTDLTA--EAVNVAIAAPPSEGEANAELCRYLSKVLelrKSDVVLDK 122
Cdd:TIGR00251   8 LLIRIYVQPKASKDSIVGYNEwrKRVEVKIKAPPVEGKANRELIKFFGEIF---GVDVEIVS 66
 
Name Accession Description Interval E-value
DUF167 pfam02594
Uncharacterized ACR, YggU family COG1872;
63-122 2.47e-20

Uncharacterized ACR, YggU family COG1872;


Pssm-ID: 460608  Cd Length: 75  Bit Score: 79.77  E-value: 2.47e-20
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 237858668   63 VTIAIHAKPGSKQNAVT--DLTAEAVNVAIAAPPSEGEANAELCRYLSKVLELRKSDVVLDK 122
Cdd:pfam02594   2 VILAVRVKPGAKRDAIGggAVGRGALKVRVAAPPVDGKANAALIEFLAKALGVPKSDVSIVS 63
YggU COG1872
Uncharacterized conserved protein YggU, UPF0235/DUF167 family [Function unknown];
60-120 2.14e-16

Uncharacterized conserved protein YggU, UPF0235/DUF167 family [Function unknown];


Pssm-ID: 441476  Cd Length: 81  Bit Score: 69.74  E-value: 2.14e-16
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 237858668  60 KGCVTIAIHAKPGSKQNAVTDLTAEAVNVAIAAPPSEGEANAELCRYLSKVLELRKSDVVL 120
Cdd:COG1872    8 GDGLILAVRVQPGASRDAIVGVHGGALKVRVTAPPVDGKANAALIKLLAKALGVPKSRVEI 68
PRK05090 PRK05090
hypothetical protein; Validated
 65-122 9.19e-09

hypothetical protein; Validated


Pssm-ID: 179931  Cd Length: 95  Bit Score: 50.31  E-value: 9.19e-09
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 237858668  65 IAIHAKPGSKQNAVTDLTAEAVNVAIAAPPSEGEANAELCRYLSKVLELRKSDVVLDK 122
Cdd:PRK05090  13 LRLYIQPKASRDQIVGLHGDELKVAITAPPVDGQANAHLLKFLAKQFRVAKSQVVIEK 70
PRK04021 PRK04021
hypothetical protein; Reviewed
 63-111 6.71e-07

hypothetical protein; Reviewed


Pssm-ID: 167678  Cd Length: 92  Bit Score: 45.18  E-value: 6.71e-07
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|.
gi 237858668  63 VTIAIHAKPGSKQNAV--TDLTAEAVNVAIAAPPSEGEANAELCRYLSKVL 111
Cdd:PRK04021   9 VILQVYVQPKAKENEIegVDEWRGRLKVKIKAPPVKGKANKELVKFFSKLL 59
TIGR00251 TIGR00251
TIGR00251 family protein; [Hypothetical proteins, Conserved]
 63-122 3.55e-06

TIGR00251 family protein; [Hypothetical proteins, Conserved]


Pssm-ID: 129353  Cd Length: 87  Bit Score: 43.27  E-value: 3.55e-06
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 237858668   63 VTIAIHAKPGSKQNAVTDLTA--EAVNVAIAAPPSEGEANAELCRYLSKVLelrKSDVVLDK 122
Cdd:TIGR00251   8 LLIRIYVQPKASKDSIVGYNEwrKRVEVKIKAPPVEGKANRELIKFFGEIF---GVDVEIVS 66
PRK01530 PRK01530
hypothetical protein; Reviewed
 63-118 2.82e-05

hypothetical protein; Reviewed


Pssm-ID: 134567  Cd Length: 105  Bit Score: 40.95  E-value: 2.82e-05
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 237858668  63 VTIAIHAKPGSKQNAVTDL----TAEAVNVAIAAPPSEGEANAELCRYLSKVLELRKSDV 118
Cdd:PRK01530  14 ALLNLKVKPNAKQNLISNFviinNIPYLKLSIKAIPEQGKANEEIINYLAKEWKLSRSNI 73
PRK00647 PRK00647
hypothetical protein; Validated
 67-120 1.49e-04

hypothetical protein; Validated


Pssm-ID: 100624  Cd Length: 96  Bit Score: 39.08  E-value: 1.49e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 237858668  67 IHAKPGSKQNAVTDLTAEAVNVAIAAPPSEGEANAELCRYLSKVLELRKSDVVL 120
Cdd:PRK00647  10 VKVTPKARENKIVGFEGGILKVRVTEVPEKGKANDAVIALLAKFLSLPKRDVTL 63
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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