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Conserved domains on  [gi|237858666|ref|NP_001153586|]
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UPF0235 protein C15orf40 isoform c [Homo sapiens]

Protein Classification

DUF167 domain-containing protein( domain architecture ID 10495619)

DUF167 domain-containing protein similar to Homo sapiens UPF0235 protein C15orf40

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF167 pfam02594
Uncharacterized ACR, YggU family COG1872;
63-131 7.22e-20

Uncharacterized ACR, YggU family COG1872;


:

Pssm-ID: 460608  Cd Length: 75  Bit Score: 77.84  E-value: 7.22e-20
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 237858666   63 VTIAIHAKPGSKQNAVT--DLTAEAVNVAIAAPPSEGEANAELCRYLSKVLELRKSDVVLDKKLRDLLKIV 131
Cdd:pfam02594   2 VILAVRVKPGAKRDAIGggAVGRGALKVRVAAPPVDGKANAALIEFLAKALGVPKSDVSIVSGETSRHKVV 72
 
Name Accession Description Interval E-value
DUF167 pfam02594
Uncharacterized ACR, YggU family COG1872;
63-131 7.22e-20

Uncharacterized ACR, YggU family COG1872;


Pssm-ID: 460608  Cd Length: 75  Bit Score: 77.84  E-value: 7.22e-20
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 237858666   63 VTIAIHAKPGSKQNAVT--DLTAEAVNVAIAAPPSEGEANAELCRYLSKVLELRKSDVVLDKKLRDLLKIV 131
Cdd:pfam02594   2 VILAVRVKPGAKRDAIGggAVGRGALKVRVAAPPVDGKANAALIEFLAKALGVPKSDVSIVSGETSRHKVV 72
YggU COG1872
Uncharacterized conserved protein YggU, UPF0235/DUF167 family [Function unknown];
60-120 5.45e-16

Uncharacterized conserved protein YggU, UPF0235/DUF167 family [Function unknown];


Pssm-ID: 441476  Cd Length: 81  Bit Score: 68.20  E-value: 5.45e-16
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 237858666  60 KGCVTIAIHAKPGSKQNAVTDLTAEAVNVAIAAPPSEGEANAELCRYLSKVLELRKSDVVL 120
Cdd:COG1872    8 GDGLILAVRVQPGASRDAIVGVHGGALKVRVTAPPVDGKANAALIKLLAKALGVPKSRVEI 68
PRK05090 PRK05090
hypothetical protein; Validated
 65-122 1.04e-08

hypothetical protein; Validated


Pssm-ID: 179931  Cd Length: 95  Bit Score: 49.54  E-value: 1.04e-08
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 237858666  65 IAIHAKPGSKQNAVTDLTAEAVNVAIAAPPSEGEANAELCRYLSKVLELRKSDVVLDK 122
Cdd:PRK05090  13 LRLYIQPKASRDQIVGLHGDELKVAITAPPVDGQANAHLLKFLAKQFRVAKSQVVIEK 70
TIGR00251 TIGR00251
TIGR00251 family protein; [Hypothetical proteins, Conserved]
 63-122 1.43e-05

TIGR00251 family protein; [Hypothetical proteins, Conserved]


Pssm-ID: 129353  Cd Length: 87  Bit Score: 41.34  E-value: 1.43e-05
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 237858666   63 VTIAIHAKPGSKQNAVTDLTA--EAVNVAIAAPPSEGEANAELCRYLSKVLelrKSDVVLDK 122
Cdd:TIGR00251   8 LLIRIYVQPKASKDSIVGYNEwrKRVEVKIKAPPVEGKANRELIKFFGEIF---GVDVEIVS 66
 
Name Accession Description Interval E-value
DUF167 pfam02594
Uncharacterized ACR, YggU family COG1872;
63-131 7.22e-20

Uncharacterized ACR, YggU family COG1872;


Pssm-ID: 460608  Cd Length: 75  Bit Score: 77.84  E-value: 7.22e-20
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 237858666   63 VTIAIHAKPGSKQNAVT--DLTAEAVNVAIAAPPSEGEANAELCRYLSKVLELRKSDVVLDKKLRDLLKIV 131
Cdd:pfam02594   2 VILAVRVKPGAKRDAIGggAVGRGALKVRVAAPPVDGKANAALIEFLAKALGVPKSDVSIVSGETSRHKVV 72
YggU COG1872
Uncharacterized conserved protein YggU, UPF0235/DUF167 family [Function unknown];
60-120 5.45e-16

Uncharacterized conserved protein YggU, UPF0235/DUF167 family [Function unknown];


Pssm-ID: 441476  Cd Length: 81  Bit Score: 68.20  E-value: 5.45e-16
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 237858666  60 KGCVTIAIHAKPGSKQNAVTDLTAEAVNVAIAAPPSEGEANAELCRYLSKVLELRKSDVVL 120
Cdd:COG1872    8 GDGLILAVRVQPGASRDAIVGVHGGALKVRVTAPPVDGKANAALIKLLAKALGVPKSRVEI 68
PRK05090 PRK05090
hypothetical protein; Validated
 65-122 1.04e-08

hypothetical protein; Validated


Pssm-ID: 179931  Cd Length: 95  Bit Score: 49.54  E-value: 1.04e-08
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 237858666  65 IAIHAKPGSKQNAVTDLTAEAVNVAIAAPPSEGEANAELCRYLSKVLELRKSDVVLDK 122
Cdd:PRK05090  13 LRLYIQPKASRDQIVGLHGDELKVAITAPPVDGQANAHLLKFLAKQFRVAKSQVVIEK 70
PRK01530 PRK01530
hypothetical protein; Reviewed
 63-134 2.53e-06

hypothetical protein; Reviewed


Pssm-ID: 134567  Cd Length: 105  Bit Score: 43.65  E-value: 2.53e-06
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 237858666  63 VTIAIHAKPGSKQNAVTDL----TAEAVNVAIAAPPSEGEANAELCRYLSKVLELRKSDVVLDKKLRDLLKIVPCK 134
Cdd:PRK01530  14 ALLNLKVKPNAKQNLISNFviinNIPYLKLSIKAIPEQGKANEEIINYLAKEWKLSRSNIEIIKGHTHSLKTILIK 89
PRK04021 PRK04021
hypothetical protein; Reviewed
 63-111 6.47e-06

hypothetical protein; Reviewed


Pssm-ID: 167678  Cd Length: 92  Bit Score: 42.10  E-value: 6.47e-06
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|.
gi 237858666  63 VTIAIHAKPGSKQNAV--TDLTAEAVNVAIAAPPSEGEANAELCRYLSKVL 111
Cdd:PRK04021   9 VILQVYVQPKAKENEIegVDEWRGRLKVKIKAPPVKGKANKELVKFFSKLL 59
TIGR00251 TIGR00251
TIGR00251 family protein; [Hypothetical proteins, Conserved]
 63-122 1.43e-05

TIGR00251 family protein; [Hypothetical proteins, Conserved]


Pssm-ID: 129353  Cd Length: 87  Bit Score: 41.34  E-value: 1.43e-05
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 237858666   63 VTIAIHAKPGSKQNAVTDLTA--EAVNVAIAAPPSEGEANAELCRYLSKVLelrKSDVVLDK 122
Cdd:TIGR00251   8 LLIRIYVQPKASKDSIVGYNEwrKRVEVKIKAPPVEGKANRELIKFFGEIF---GVDVEIVS 66
PRK00647 PRK00647
hypothetical protein; Validated
 67-120 2.85e-04

hypothetical protein; Validated


Pssm-ID: 100624  Cd Length: 96  Bit Score: 37.92  E-value: 2.85e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 237858666  67 IHAKPGSKQNAVTDLTAEAVNVAIAAPPSEGEANAELCRYLSKVLELRKSDVVL 120
Cdd:PRK00647  10 VKVTPKARENKIVGFEGGILKVRVTEVPEKGKANDAVIALLAKFLSLPKRDVTL 63
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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