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Conserved domains on  [gi|227430289|ref|NP_001153048|]
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amiloride-sensitive sodium channel subunit alpha isoform 2 [Homo sapiens]

Protein Classification

epithelial sodium channel family protein( domain architecture ID 10017482)

epithelial sodium channel (ENaC) family protein acts as sodium channel transporter; similar to Homo sapiens acid-sensing ion channel 1 and amiloride-sensitive sodium channel subunits alpha/beta/gamma/delta

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
ENaC TIGR00859
sodium channel transporter; The Epithelial Na+ Channel (ENaC) Family (TC 1.A.06)The ENaC ...
113-706 0e+00

sodium channel transporter; The Epithelial Na+ Channel (ENaC) Family (TC 1.A.06)The ENaC family consists of sodium channels from animals and has no recognizable homologues in other eukaryotes or bacteria. The vertebrate ENaC proteins from epithelial cells cluster tightly together on the phylogenetic tree: voltage-insensitive ENaC homologues are also found in the brain. Eleven sequenced C. elegans proteins, including the degenerins, are distantly related to the vertebrate proteins as well as to each other. At least some ofthese proteins form part of a mechano-transducing complex for touch sensitivity. Other members of the ENaC family, the acid-sensing ion channels, ASIC1-3,are homo- or hetero-oligomeric neuronal H+-gated channels that mediate pain sensation in response to tissue acidosis. The homologous Helix aspersa(FMRF-amide)-activated Na+ channel is the first peptide neurotransmitter-gated ionotropic receptor to be sequenced.Mammalian ENaC is important for the maintenance of Na+ balance and the regulation of blood pressure. Three homologous ENaC subunits, a, b and g, havebeen shown to assemble to form the highly Na+-selective channel.This model is designed from the vertebrate members of the ENaC family. [Transport and binding proteins, Cations and iron carrying compounds]


:

Pssm-ID: 273304 [Multi-domain]  Cd Length: 595  Bit Score: 1003.10  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430289  113 SYRELFEFFCNNTTIHGAIRLVCSQHNRMKTAFWAVLWLCTFGMMYWQFGLLFGEYFSYPVSLNINLNSDKLVFPAVTIC 192
Cdd:TIGR00859   1 SYRELLVWFCNNTTTHGAIRIVCSRGGRLKRALWALLTLLALALLLWQCGLLVRYYLSYPVSVSLSVNSDKLTFPAVTLC 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430289  193 TLNPYRYPEIKEELEELDRITEQTLFDLYKYSSFTTLVAGSRSR-RDLRGTLPHPLQRLRVPPPPHGaRRARSVASSLRD 271
Cdd:TIGR00859  81 NLNPYRYSKVKHLLEELDLETAQTLLSLYGYNSSLARSARSNNRnRIPLVVLDETLPRHPVPRDLFT-RQVHNKLISNRS 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430289  272 NNPQVDWKDWKIGFQLCNQNKSDCFYQTYSSGVDAVREWYRFHYINILSRLPETLPSLEEDTLGNFIFACRFNQVSCNQA 351
Cdd:TIGR00859 160 NSPQVNASDWKVGFKLCNNNGSDCFYRTYTSGVQAVREWYRFHYINIFAQVPAEDKDRMGYQLEDFILTCRFDGESCDAR 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430289  352 NYSHFHHPMYGNCYTFNDKNNSNLWMSSMPGINNGLSLMLRAEQNDFIPLLSTVTGARVMVHGQDEPAFMDDGGFNLRPG 431
Cdd:TIGR00859 240 NFTHFHHPMYGNCYTFNSGENSNLLTSSMPGAENGLKLVLDIEQDEYLPLLSTEAGARVMVHSQDEPPFIDDLGFGVRPG 319
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430289  432 VETSISMRKETLDRLGGDYGDCTKNGSDVPVENLYPSKYTQQVCIHSCFQESMIKECGCAYIFYPRPQNVEYCDYRKHSS 511
Cdd:TIGR00859 320 TETSISMQEDELQRLGGPYGDCTENGSDVPVENLYNSSYSIQACLRSCFQRYMVENCGCAYYHYPLPGGAEYCNYEQHPD 399
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430289  512 WGYCYYKLQVDFSSDHLGCFTKCRKPCSVTSYQLSAGYSRWPSVTSQEWVFQMLSRQNNYTVNNKRNGVAKVNIFFKELN 591
Cdd:TIGR00859 400 WAYCYYKLYAEFDQEELGCFSVCREPCNFTEYKLTLSMARWPSAASEDWLLHVLSRQNEYNITLIRNGIAKLNIFFEELN 479
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430289  592 YKTNSESPSVTMVTLLSNLGSQWSLWFGSSVLSVVEMAELVFDLLVIMFLMLLRRFRsRYWSPGRGGRGAQEVASTLASS 671
Cdd:TIGR00859 480 YRTIEESPAYNVVTLLSNLGGQMGLWMGASVLCVLELLELIIDLIFITLLRLLWRFR-KWWQRRRGPPYAEPPEPVSADT 558
                         570       580       590
                  ....*....|....*....|....*....|....*..
gi 227430289  672 PPSHFCPHPMSLSLSQPGPAPSP--ALTAPPPAYATL 706
Cdd:TIGR00859 559 PPSLQLDDPPTFPSALPLPHASGlsLPGTPPPNYNTL 595
 
Name Accession Description Interval E-value
ENaC TIGR00859
sodium channel transporter; The Epithelial Na+ Channel (ENaC) Family (TC 1.A.06)The ENaC ...
113-706 0e+00

sodium channel transporter; The Epithelial Na+ Channel (ENaC) Family (TC 1.A.06)The ENaC family consists of sodium channels from animals and has no recognizable homologues in other eukaryotes or bacteria. The vertebrate ENaC proteins from epithelial cells cluster tightly together on the phylogenetic tree: voltage-insensitive ENaC homologues are also found in the brain. Eleven sequenced C. elegans proteins, including the degenerins, are distantly related to the vertebrate proteins as well as to each other. At least some ofthese proteins form part of a mechano-transducing complex for touch sensitivity. Other members of the ENaC family, the acid-sensing ion channels, ASIC1-3,are homo- or hetero-oligomeric neuronal H+-gated channels that mediate pain sensation in response to tissue acidosis. The homologous Helix aspersa(FMRF-amide)-activated Na+ channel is the first peptide neurotransmitter-gated ionotropic receptor to be sequenced.Mammalian ENaC is important for the maintenance of Na+ balance and the regulation of blood pressure. Three homologous ENaC subunits, a, b and g, havebeen shown to assemble to form the highly Na+-selective channel.This model is designed from the vertebrate members of the ENaC family. [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273304 [Multi-domain]  Cd Length: 595  Bit Score: 1003.10  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430289  113 SYRELFEFFCNNTTIHGAIRLVCSQHNRMKTAFWAVLWLCTFGMMYWQFGLLFGEYFSYPVSLNINLNSDKLVFPAVTIC 192
Cdd:TIGR00859   1 SYRELLVWFCNNTTTHGAIRIVCSRGGRLKRALWALLTLLALALLLWQCGLLVRYYLSYPVSVSLSVNSDKLTFPAVTLC 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430289  193 TLNPYRYPEIKEELEELDRITEQTLFDLYKYSSFTTLVAGSRSR-RDLRGTLPHPLQRLRVPPPPHGaRRARSVASSLRD 271
Cdd:TIGR00859  81 NLNPYRYSKVKHLLEELDLETAQTLLSLYGYNSSLARSARSNNRnRIPLVVLDETLPRHPVPRDLFT-RQVHNKLISNRS 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430289  272 NNPQVDWKDWKIGFQLCNQNKSDCFYQTYSSGVDAVREWYRFHYINILSRLPETLPSLEEDTLGNFIFACRFNQVSCNQA 351
Cdd:TIGR00859 160 NSPQVNASDWKVGFKLCNNNGSDCFYRTYTSGVQAVREWYRFHYINIFAQVPAEDKDRMGYQLEDFILTCRFDGESCDAR 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430289  352 NYSHFHHPMYGNCYTFNDKNNSNLWMSSMPGINNGLSLMLRAEQNDFIPLLSTVTGARVMVHGQDEPAFMDDGGFNLRPG 431
Cdd:TIGR00859 240 NFTHFHHPMYGNCYTFNSGENSNLLTSSMPGAENGLKLVLDIEQDEYLPLLSTEAGARVMVHSQDEPPFIDDLGFGVRPG 319
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430289  432 VETSISMRKETLDRLGGDYGDCTKNGSDVPVENLYPSKYTQQVCIHSCFQESMIKECGCAYIFYPRPQNVEYCDYRKHSS 511
Cdd:TIGR00859 320 TETSISMQEDELQRLGGPYGDCTENGSDVPVENLYNSSYSIQACLRSCFQRYMVENCGCAYYHYPLPGGAEYCNYEQHPD 399
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430289  512 WGYCYYKLQVDFSSDHLGCFTKCRKPCSVTSYQLSAGYSRWPSVTSQEWVFQMLSRQNNYTVNNKRNGVAKVNIFFKELN 591
Cdd:TIGR00859 400 WAYCYYKLYAEFDQEELGCFSVCREPCNFTEYKLTLSMARWPSAASEDWLLHVLSRQNEYNITLIRNGIAKLNIFFEELN 479
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430289  592 YKTNSESPSVTMVTLLSNLGSQWSLWFGSSVLSVVEMAELVFDLLVIMFLMLLRRFRsRYWSPGRGGRGAQEVASTLASS 671
Cdd:TIGR00859 480 YRTIEESPAYNVVTLLSNLGGQMGLWMGASVLCVLELLELIIDLIFITLLRLLWRFR-KWWQRRRGPPYAEPPEPVSADT 558
                         570       580       590
                  ....*....|....*....|....*....|....*..
gi 227430289  672 PPSHFCPHPMSLSLSQPGPAPSP--ALTAPPPAYATL 706
Cdd:TIGR00859 559 PPSLQLDDPPTFPSALPLPHASGlsLPGTPPPNYNTL 595
ASC pfam00858
Amiloride-sensitive sodium channel;
121-631 1.76e-115

Amiloride-sensitive sodium channel;


Pssm-ID: 459966 [Multi-domain]  Cd Length: 439  Bit Score: 354.94  E-value: 1.76e-115
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430289  121 FCNNTTIHGaIRLVCSQHNRMKTAFWAVLWLCTFGMMYWQFGLLFGEYFSYPVSLNIN--LNSDKLVFPAVTICTLNPYR 198
Cdd:pfam00858   1 FCENTSIHG-VRYIKSKDGFLRRLFWLLLFLASLIFLIYLISLLFEKYLSYPVITVIEeiLYVWNVPFPAVTICNLNPFR 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430289  199 YPEIKEELEELDRITEQTLFDLykyssfttlvagsrsrrdlrgtlphplqrlrvpppphgarrarsvasslrdnnpqvdw 278
Cdd:pfam00858  80 YSALKELSLFYDNLSFLLYLKF---------------------------------------------------------- 101
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430289  279 kdwkigfqlcNQNKSDCFYQTYSSGVDAVREWYRFHYINILSRLPETLPSLEEDTLGNFIFACRFN--QVSCNqANYSHF 356
Cdd:pfam00858 102 ----------KFLEKILKSLTSNTEELEDELKLLLDFTNELLNSLSGYILNLGLRCEDLIVSCSFGgeKEDCS-ANFTPI 170
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430289  357 HHpMYGNCYTFNDKNNSNLWMSSM---PGINNGLSLMLRAEQND-FIPLLSTVTGARVMVHGQDEPAFMDDGGFNLRPGV 432
Cdd:pfam00858 171 LT-EYGNCYTFNSKDNGSKLYPRRlkgAGSGRGLSLILNIQQSEtYSPLDYQAAGFKVSIHSPGEPPDVDKRGFSVPPGT 249
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430289  433 ETSISMRKETLDRLGGDYGDCTKNgsdvPVENLYPSKYTQQVCIHSCFQESMIKECGCAYIFYPRPQNVeycdyrKHSSW 512
Cdd:pfam00858 250 ETSVGIQPTEITTLKRPYGNCTFD----DEKLLYFKSYSQSNCLLECRQNYILKLCGCVPFFYPLPPGT------KTGAD 319
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430289  513 GYCYYKLQVDFSS--DHLGCFtKCRKPCSVTSYQLSAGYSRWPSVTSQEWVFQMLSRQNNYTVNNKRNGVAKVNIFFKEL 590
Cdd:pfam00858 320 IPCLLNYEDHLLEvnEGLSCQ-DCLPPCNETEYETEISYSTWPSLSSQLFLLYYELSTYNNSSSTIRENLAKLNIYFKEL 398
                         490       500       510       520
                  ....*....|....*....|....*....|....*....|.
gi 227430289  591 NYKTNSESPSVTMVTLLSNLGSQWSLWFGSSVLSVVEMAEL 631
Cdd:pfam00858 399 NYETYRRSPAYTWTDLLSSIGGQLGLFLGASVLSLVEIVYF 439
PHA02682 PHA02682
ORF080 virion core protein; Provisional
666-724 5.11e-05

ORF080 virion core protein; Provisional


Pssm-ID: 177464 [Multi-domain]  Cd Length: 280  Bit Score: 45.62  E-value: 5.11e-05
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 227430289 666 STLASSPPshfCPHPMSLSLSQPGPAPSPALTAP------PPAYATLGPRPSPGGSAGASSSTCP 724
Cdd:PHA02682  80 SPLAPSPA---CAAPAPACPACAPAAPAPAVTCPapapacPPATAPTCPPPAVCPAPARPAPACP 141
 
Name Accession Description Interval E-value
ENaC TIGR00859
sodium channel transporter; The Epithelial Na+ Channel (ENaC) Family (TC 1.A.06)The ENaC ...
113-706 0e+00

sodium channel transporter; The Epithelial Na+ Channel (ENaC) Family (TC 1.A.06)The ENaC family consists of sodium channels from animals and has no recognizable homologues in other eukaryotes or bacteria. The vertebrate ENaC proteins from epithelial cells cluster tightly together on the phylogenetic tree: voltage-insensitive ENaC homologues are also found in the brain. Eleven sequenced C. elegans proteins, including the degenerins, are distantly related to the vertebrate proteins as well as to each other. At least some ofthese proteins form part of a mechano-transducing complex for touch sensitivity. Other members of the ENaC family, the acid-sensing ion channels, ASIC1-3,are homo- or hetero-oligomeric neuronal H+-gated channels that mediate pain sensation in response to tissue acidosis. The homologous Helix aspersa(FMRF-amide)-activated Na+ channel is the first peptide neurotransmitter-gated ionotropic receptor to be sequenced.Mammalian ENaC is important for the maintenance of Na+ balance and the regulation of blood pressure. Three homologous ENaC subunits, a, b and g, havebeen shown to assemble to form the highly Na+-selective channel.This model is designed from the vertebrate members of the ENaC family. [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273304 [Multi-domain]  Cd Length: 595  Bit Score: 1003.10  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430289  113 SYRELFEFFCNNTTIHGAIRLVCSQHNRMKTAFWAVLWLCTFGMMYWQFGLLFGEYFSYPVSLNINLNSDKLVFPAVTIC 192
Cdd:TIGR00859   1 SYRELLVWFCNNTTTHGAIRIVCSRGGRLKRALWALLTLLALALLLWQCGLLVRYYLSYPVSVSLSVNSDKLTFPAVTLC 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430289  193 TLNPYRYPEIKEELEELDRITEQTLFDLYKYSSFTTLVAGSRSR-RDLRGTLPHPLQRLRVPPPPHGaRRARSVASSLRD 271
Cdd:TIGR00859  81 NLNPYRYSKVKHLLEELDLETAQTLLSLYGYNSSLARSARSNNRnRIPLVVLDETLPRHPVPRDLFT-RQVHNKLISNRS 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430289  272 NNPQVDWKDWKIGFQLCNQNKSDCFYQTYSSGVDAVREWYRFHYINILSRLPETLPSLEEDTLGNFIFACRFNQVSCNQA 351
Cdd:TIGR00859 160 NSPQVNASDWKVGFKLCNNNGSDCFYRTYTSGVQAVREWYRFHYINIFAQVPAEDKDRMGYQLEDFILTCRFDGESCDAR 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430289  352 NYSHFHHPMYGNCYTFNDKNNSNLWMSSMPGINNGLSLMLRAEQNDFIPLLSTVTGARVMVHGQDEPAFMDDGGFNLRPG 431
Cdd:TIGR00859 240 NFTHFHHPMYGNCYTFNSGENSNLLTSSMPGAENGLKLVLDIEQDEYLPLLSTEAGARVMVHSQDEPPFIDDLGFGVRPG 319
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430289  432 VETSISMRKETLDRLGGDYGDCTKNGSDVPVENLYPSKYTQQVCIHSCFQESMIKECGCAYIFYPRPQNVEYCDYRKHSS 511
Cdd:TIGR00859 320 TETSISMQEDELQRLGGPYGDCTENGSDVPVENLYNSSYSIQACLRSCFQRYMVENCGCAYYHYPLPGGAEYCNYEQHPD 399
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430289  512 WGYCYYKLQVDFSSDHLGCFTKCRKPCSVTSYQLSAGYSRWPSVTSQEWVFQMLSRQNNYTVNNKRNGVAKVNIFFKELN 591
Cdd:TIGR00859 400 WAYCYYKLYAEFDQEELGCFSVCREPCNFTEYKLTLSMARWPSAASEDWLLHVLSRQNEYNITLIRNGIAKLNIFFEELN 479
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430289  592 YKTNSESPSVTMVTLLSNLGSQWSLWFGSSVLSVVEMAELVFDLLVIMFLMLLRRFRsRYWSPGRGGRGAQEVASTLASS 671
Cdd:TIGR00859 480 YRTIEESPAYNVVTLLSNLGGQMGLWMGASVLCVLELLELIIDLIFITLLRLLWRFR-KWWQRRRGPPYAEPPEPVSADT 558
                         570       580       590
                  ....*....|....*....|....*....|....*..
gi 227430289  672 PPSHFCPHPMSLSLSQPGPAPSP--ALTAPPPAYATL 706
Cdd:TIGR00859 559 PPSLQLDDPPTFPSALPLPHASGlsLPGTPPPNYNTL 595
ASC pfam00858
Amiloride-sensitive sodium channel;
121-631 1.76e-115

Amiloride-sensitive sodium channel;


Pssm-ID: 459966 [Multi-domain]  Cd Length: 439  Bit Score: 354.94  E-value: 1.76e-115
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430289  121 FCNNTTIHGaIRLVCSQHNRMKTAFWAVLWLCTFGMMYWQFGLLFGEYFSYPVSLNIN--LNSDKLVFPAVTICTLNPYR 198
Cdd:pfam00858   1 FCENTSIHG-VRYIKSKDGFLRRLFWLLLFLASLIFLIYLISLLFEKYLSYPVITVIEeiLYVWNVPFPAVTICNLNPFR 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430289  199 YPEIKEELEELDRITEQTLFDLykyssfttlvagsrsrrdlrgtlphplqrlrvpppphgarrarsvasslrdnnpqvdw 278
Cdd:pfam00858  80 YSALKELSLFYDNLSFLLYLKF---------------------------------------------------------- 101
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430289  279 kdwkigfqlcNQNKSDCFYQTYSSGVDAVREWYRFHYINILSRLPETLPSLEEDTLGNFIFACRFN--QVSCNqANYSHF 356
Cdd:pfam00858 102 ----------KFLEKILKSLTSNTEELEDELKLLLDFTNELLNSLSGYILNLGLRCEDLIVSCSFGgeKEDCS-ANFTPI 170
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430289  357 HHpMYGNCYTFNDKNNSNLWMSSM---PGINNGLSLMLRAEQND-FIPLLSTVTGARVMVHGQDEPAFMDDGGFNLRPGV 432
Cdd:pfam00858 171 LT-EYGNCYTFNSKDNGSKLYPRRlkgAGSGRGLSLILNIQQSEtYSPLDYQAAGFKVSIHSPGEPPDVDKRGFSVPPGT 249
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430289  433 ETSISMRKETLDRLGGDYGDCTKNgsdvPVENLYPSKYTQQVCIHSCFQESMIKECGCAYIFYPRPQNVeycdyrKHSSW 512
Cdd:pfam00858 250 ETSVGIQPTEITTLKRPYGNCTFD----DEKLLYFKSYSQSNCLLECRQNYILKLCGCVPFFYPLPPGT------KTGAD 319
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430289  513 GYCYYKLQVDFSS--DHLGCFtKCRKPCSVTSYQLSAGYSRWPSVTSQEWVFQMLSRQNNYTVNNKRNGVAKVNIFFKEL 590
Cdd:pfam00858 320 IPCLLNYEDHLLEvnEGLSCQ-DCLPPCNETEYETEISYSTWPSLSSQLFLLYYELSTYNNSSSTIRENLAKLNIYFKEL 398
                         490       500       510       520
                  ....*....|....*....|....*....|....*....|.
gi 227430289  591 NYKTNSESPSVTMVTLLSNLGSQWSLWFGSSVLSVVEMAEL 631
Cdd:pfam00858 399 NYETYRRSPAYTWTDLLSSIGGQLGLFLGASVLSLVEIVYF 439
deg-1 TIGR00867
degenerin; The Epithelial Na+ Channel (ENaC) Family (TC 1.A.06)The ENaC family consists of ...
121-631 3.60e-67

degenerin; The Epithelial Na+ Channel (ENaC) Family (TC 1.A.06)The ENaC family consists of sodium channels from animals and has no recognizable homologues in other eukaryotes or bacteria. The vertebrate ENaC proteins from epithelial cells cluster tightly together on the phylogenetic tree: voltage-insensitive ENaC homologues are also found in the brain. Eleven sequenced C. elegans proteins, including the degenerins, are distantly related to the vertebrate proteins as well as to each other. At least some ofthese proteins form part of a mechano-transducing complex for touch sensitivity. Other members of the ENaC family, the acid-sensing ion channels, ASIC1-3,are homo- or hetero-oligomeric neuronal H+-gated channels that mediate pain sensation in response to tissue acidosis. The homologous Helix aspersa(FMRF-amide)-activated Na+ channel is the first peptide neurotransmitter-gated ionotropic receptor to be sequenced.Mammalian ENaC is important for the maintenance of Na+ balance and the regulation of blood pressure. Three homologous ENaC subunits, a, b and g, havebeen shown to assemble to form the highly Na+-selective channel.This model is designed from the invertebrate members of the ENaC family. [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273309 [Multi-domain]  Cd Length: 600  Bit Score: 232.43  E-value: 3.60e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430289  121 FCNNTTIHGaIRLVCSQHNRMKTAFWAVLWLCTFGMMYWQFGLLFGEYFSYPVSLNINLNSDKLVFPAVTICTLNPYRY- 199
Cdd:TIGR00867   2 FCYKTTFHG-IPMVATASNSFSRAFWVALFLICLLMFAYQAYILISKYFQYEKIVDIQLKFETAPFPAITVCNLNPYKYs 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430289  200 -----PEIKEELE------------ELDRITEQTLFDLYKYSSFTTLVAgsRSRRDLRGTLPHPLQRLRVPPPPHGARRA 262
Cdd:TIGR00867  81 lvrsvPEISETLDafdraigasnksEGDELELITERKLHSKTRRQKLKA--KGAPELEDGMYEPVFSQCTCDEQGMGECK 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430289  263 RSVASSLRDNN------------------PQVDWKDWKIGfqLCNQN--------------KSDCFYQTYS------SGV 304
Cdd:TIGR00867 159 SQRSAEPRGHTsrcicaydrvtgdawpcfPYSTWTTKKCS--LCNDNgfcpkpnkkgakeqKDPCLCQSESnhcvshPGK 236
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430289  305 DAVREWYRFHYINILSRLPETLPSLEED---------------------------------------TLGNFIFACRFNQ 345
Cdd:TIGR00867 237 GIIREIWPNLENNDPTTGKPTTEAPETLealgfgnmtdevaittqakenlifamaalsdkarealsyTKHELILKCSFNG 316
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430289  346 VSCN-QANYSHFHHPMYGNCYTFNDKNNSNLwMSSMPGINNGLSLMLRAEQNDFIPLlSTVTGARVMVHGQDEPAFMDDG 424
Cdd:TIGR00867 317 KPCDiDRDFTLHIDPVFGNCYTFNYNRSVNL-SSSRAGPMYGLRLLLFVNQSDYLPT-TEAAGVRLTIHDKDEFPFPDTF 394
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430289  425 GFNLRPGVETSISMRKETLDRLGGDYGDCTKNGSDVP-VENLYpsKYTQQVCIHSCFQESMIKECGCAYIFYPRPQNVEY 503
Cdd:TIGR00867 395 GYSAPTGYISSFGVRLKQMSRLPAPYGNCVDTGKDSSyIYKGY--IYSPEGCHRSCFQRLIIAKCGCADPRFPVPEGTRH 472
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430289  504 CD---------YRKHSSWgycyyklQVDFSSDHLGCftKCRKPCSVTSYQLSAGYSRWPSVTSQEWVFQMLSRQNNYTVN 574
Cdd:TIGR00867 473 CQafnktdrecLETLTGD-------LGELHHSIFKC--RCQQPCQESIYTTTYSAAKWPSGSLKITLGSCDSNTASECNE 543
                         570       580       590       600       610
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 227430289  575 NKRNGVAKVNIFFKELNYKTNSESPSVTMVTLLSNLGSQWSLWFGSSVLSVVEMAEL 631
Cdd:TIGR00867 544 YYRENAAMIEVFYEQLNYELLTESEAYTLVNLIADFGGQLGLWLGASVITVCEFVFL 600
PHA02682 PHA02682
ORF080 virion core protein; Provisional
666-724 5.11e-05

ORF080 virion core protein; Provisional


Pssm-ID: 177464 [Multi-domain]  Cd Length: 280  Bit Score: 45.62  E-value: 5.11e-05
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 227430289 666 STLASSPPshfCPHPMSLSLSQPGPAPSPALTAP------PPAYATLGPRPSPGGSAGASSSTCP 724
Cdd:PHA02682  80 SPLAPSPA---CAAPAPACPACAPAAPAPAVTCPapapacPPATAPTCPPPAVCPAPARPAPACP 141
PLN02258 PLN02258
9-cis-epoxycarotenoid dioxygenase NCED
649-712 3.89e-03

9-cis-epoxycarotenoid dioxygenase NCED


Pssm-ID: 215145 [Multi-domain]  Cd Length: 590  Bit Score: 40.45  E-value: 3.89e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 227430289 649 SRYWSPGRGGRGAQEVASTLASSPPSHFCPHPMS------LSLSQPGPAPSPALTAPPPAYATLGPRPSP 712
Cdd:PLN02258   3 SSNPTSRSQSHASSSSSSSSQSSPPSSTSPRPRRrkpsasSLLHTPSILPLPKLSSPSPPSVTLPPAATT 72
PUMA pfam15826
Bcl-2-binding component 3, p53 upregulated modulator of apoptosis; PUMA (p53 upregulated ...
672-728 5.70e-03

Bcl-2-binding component 3, p53 upregulated modulator of apoptosis; PUMA (p53 upregulated modulator of apoptosis) is a family of eukaryotic proteins that are a target for activation by p53. The proteins contain BH3 domains and are induced in cells after p53 activation. They bind to Bcl-2, localize to the mitochondria to induce cytochrome c release, and activate the rapid induction of apoptosis.


Pssm-ID: 374148 [Multi-domain]  Cd Length: 189  Bit Score: 38.78  E-value: 5.70e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 227430289  672 PPSHFCPHPMSLSLSQPG-----------PAPSPALTAPPP---AYATLGPRPSPGGSAGASSSTCPLGGP 728
Cdd:pfam15826  25 PLGRLVPSAVSCGLCEPGlnprvagpsllPAPGAALAPPSPppvWVSCTSQPRAYGGPRWRRRAPRPLAGP 95
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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