NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|197245458|ref|NP_001127812|]
View 

proteasome assembly chaperone 3 [Homo sapiens]

Protein Classification

PAC3 domain-containing protein( domain architecture ID 10562790)

PAC3 domain-containing protein

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
PAC3 pfam10178
Proteasome assembly chaperone 3; PAC3 is a family of eukaryotic proteasome assembly chaperone ...
 34-119 8.21e-33

Proteasome assembly chaperone 3; PAC3 is a family of eukaryotic proteasome assembly chaperone 3 proteins conserved from fungi to plants to humans. PAC3 plays a crucial part in the assembly of the 20S core proteasome unit, in conjunction with PAC4.


:

Pssm-ID: 462980  Cd Length: 87  Bit Score: 109.96  E-value: 8.21e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197245458   34 VVVTQFGKMGTLVSLEPSSVASDVSKPVLTTKVLLGQ-DEPLIHVFAKNLVAFVSQEAGNRAVLLAVAVKDKSMEGLKAL 112
Cdd:pfam10178   1 VVITQLGKMGTLISARFDSEGGELSEPTYTVRVLLGKrDDPLLHVYARQLIEHISLEGSPKPLLLALGLKDKSPETLKAI 80


                  ....*..
gi 197245458  113 REVIRVC 119
Cdd:pfam10178  81 ASVIEEN 87
 
Name Accession Description Interval E-value
PAC3 pfam10178
Proteasome assembly chaperone 3; PAC3 is a family of eukaryotic proteasome assembly chaperone ...
 34-119 8.21e-33

Proteasome assembly chaperone 3; PAC3 is a family of eukaryotic proteasome assembly chaperone 3 proteins conserved from fungi to plants to humans. PAC3 plays a crucial part in the assembly of the 20S core proteasome unit, in conjunction with PAC4.


Pssm-ID: 462980  Cd Length: 87  Bit Score: 109.96  E-value: 8.21e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197245458   34 VVVTQFGKMGTLVSLEPSSVASDVSKPVLTTKVLLGQ-DEPLIHVFAKNLVAFVSQEAGNRAVLLAVAVKDKSMEGLKAL 112
Cdd:pfam10178   1 VVITQLGKMGTLISARFDSEGGELSEPTYTVRVLLGKrDDPLLHVYARQLIEHISLEGSPKPLLLALGLKDKSPETLKAI 80


                  ....*..
gi 197245458  113 REVIRVC 119
Cdd:pfam10178  81 ASVIEEN 87
 
Name Accession Description Interval E-value
PAC3 pfam10178
Proteasome assembly chaperone 3; PAC3 is a family of eukaryotic proteasome assembly chaperone ...
 34-119 8.21e-33

Proteasome assembly chaperone 3; PAC3 is a family of eukaryotic proteasome assembly chaperone 3 proteins conserved from fungi to plants to humans. PAC3 plays a crucial part in the assembly of the 20S core proteasome unit, in conjunction with PAC4.


Pssm-ID: 462980  Cd Length: 87  Bit Score: 109.96  E-value: 8.21e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197245458   34 VVVTQFGKMGTLVSLEPSSVASDVSKPVLTTKVLLGQ-DEPLIHVFAKNLVAFVSQEAGNRAVLLAVAVKDKSMEGLKAL 112
Cdd:pfam10178   1 VVITQLGKMGTLISARFDSEGGELSEPTYTVRVLLGKrDDPLLHVYARQLIEHISLEGSPKPLLLALGLKDKSPETLKAI 80


                  ....*..
gi 197245458  113 REVIRVC 119
Cdd:pfam10178  81 ASVIEEN 87
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH