NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Rattus norvegicus]
Protein Classification
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6( domain architecture ID 14448821)
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 (NDUFA6) is an accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), which is believed to be not involved in catalysis
List of domain hits
| Name | Accession | Description | Interval | E-value | ||
| Complex1_LYR_NDUFA6_LYRM6 | cd20266 | LYR (leucine-tyrosine-arginine) motif found in NADH dehydrogenase [ubiquinone] 1 alpha ... |
29-101 | 9.21e-40 | ||
LYR (leucine-tyrosine-arginine) motif found in NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 (NDUFA6) and similar proteins; NDUFA6, also called LYR motif-containing protein 6 (LYRM6), or Complex I-B14 (CI-B14), or NADH-ubiquinone oxidoreductase B14 subunit, is an accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), and is believed to be not involved in catalysis. In general, accessory subunits are integral for assembly and function of Complex I, which functions in the transfer of electrons from NADH to the respiratory chain. NDUFA6 belongs to the Complex1_LYR-like superfamily that consists of proteins of diverse functions that are exclusively found in eukaryotes and contain the conserved tripeptide 'LYR' close to the N-terminus. : Pssm-ID: 380761 Cd Length: 75 Bit Score: 127.68 E-value: 9.21e-40
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| Name | Accession | Description | Interval | E-value | ||
| Complex1_LYR_NDUFA6_LYRM6 | cd20266 | LYR (leucine-tyrosine-arginine) motif found in NADH dehydrogenase [ubiquinone] 1 alpha ... |
29-101 | 9.21e-40 | ||
LYR (leucine-tyrosine-arginine) motif found in NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 (NDUFA6) and similar proteins; NDUFA6, also called LYR motif-containing protein 6 (LYRM6), or Complex I-B14 (CI-B14), or NADH-ubiquinone oxidoreductase B14 subunit, is an accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), and is believed to be not involved in catalysis. In general, accessory subunits are integral for assembly and function of Complex I, which functions in the transfer of electrons from NADH to the respiratory chain. NDUFA6 belongs to the Complex1_LYR-like superfamily that consists of proteins of diverse functions that are exclusively found in eukaryotes and contain the conserved tripeptide 'LYR' close to the N-terminus. Pssm-ID: 380761 Cd Length: 75 Bit Score: 127.68 E-value: 9.21e-40
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| Complex1_LYR | pfam05347 | Complex 1 protein (LYR family); Proteins in this family include an accessory subunit of the ... |
32-94 | 4.58e-06 | ||
Complex 1 protein (LYR family); Proteins in this family include an accessory subunit of the higher eukaryotic NADH dehydrogenase complex. In Saccharomyces cerevisiae, the Isd11 protein has been shown to play a role in Fe/S cluster biogenesis in mitochondria. We have named this family LYR after a highly conserved tripeptide motif close to the N-terminus of these proteins. Pssm-ID: 428432 Cd Length: 59 Bit Score: 41.41 E-value: 4.58e-06
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| Name | Accession | Description | Interval | E-value | ||
| Complex1_LYR_NDUFA6_LYRM6 | cd20266 | LYR (leucine-tyrosine-arginine) motif found in NADH dehydrogenase [ubiquinone] 1 alpha ... |
29-101 | 9.21e-40 | ||
LYR (leucine-tyrosine-arginine) motif found in NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 (NDUFA6) and similar proteins; NDUFA6, also called LYR motif-containing protein 6 (LYRM6), or Complex I-B14 (CI-B14), or NADH-ubiquinone oxidoreductase B14 subunit, is an accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), and is believed to be not involved in catalysis. In general, accessory subunits are integral for assembly and function of Complex I, which functions in the transfer of electrons from NADH to the respiratory chain. NDUFA6 belongs to the Complex1_LYR-like superfamily that consists of proteins of diverse functions that are exclusively found in eukaryotes and contain the conserved tripeptide 'LYR' close to the N-terminus. Pssm-ID: 380761 Cd Length: 75 Bit Score: 127.68 E-value: 9.21e-40
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| Complex1_LYR_SF | cd20251 | LYR (leucine-tyrosine-arginine) motif found in Complex1_LYR-like superfamily; The ... |
34-94 | 2.08e-08 | ||
LYR (leucine-tyrosine-arginine) motif found in Complex1_LYR-like superfamily; The Complex1_LYR-like superfamily consists of proteins of diverse functions that are exclusively found in eukaryotes and contain the conserved tripeptide 'LYR' close to the N-terminus. The human genome has at least ten LYR proteins that were predominantly identified as mitochondrial proteins. Some family members were also found in the cytosol or nucleus. LYR motif-containing protein 4 (LYRM4) represents the only LYR protein that is directly involved in the first steps of Fe-S cluster generation. Other LYR proteins have been identified as accessory subunits or assembly factors of mitochondrial OXPHOS (oxidative phosphorylation) complexes I, II, III and V, and they play specific roles in acetate metabolism. Pssm-ID: 380755 Cd Length: 57 Bit Score: 47.15 E-value: 2.08e-08
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| Complex1_LYR | pfam05347 | Complex 1 protein (LYR family); Proteins in this family include an accessory subunit of the ... |
32-94 | 4.58e-06 | ||
Complex 1 protein (LYR family); Proteins in this family include an accessory subunit of the higher eukaryotic NADH dehydrogenase complex. In Saccharomyces cerevisiae, the Isd11 protein has been shown to play a role in Fe/S cluster biogenesis in mitochondria. We have named this family LYR after a highly conserved tripeptide motif close to the N-terminus of these proteins. Pssm-ID: 428432 Cd Length: 59 Bit Score: 41.41 E-value: 4.58e-06
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| Complex1_LYR_2 | pfam13233 | Complex1_LYR-like; This is a family of proteins carrying the LYR motif of family Complex1_LYR, ... |
34-90 | 1.94e-04 | ||
Complex1_LYR-like; This is a family of proteins carrying the LYR motif of family Complex1_LYR, pfam05347, likely to be involved in Fe-S cluster biogenesis in mitochondria. Pssm-ID: 463812 Cd Length: 79 Bit Score: 37.71 E-value: 1.94e-04
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| Complex1_LYR_NDUFB9_LYRM3 | cd20263 | LYR (leucine-tyrosine-arginine) motif found in NADH dehydrogenase [ubiquinone] 1 beta ... |
31-94 | 1.96e-04 | ||
LYR (leucine-tyrosine-arginine) motif found in NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 (NDUFB9) and similar proteins; NDUFB9, also called LYR motif-containing protein 3 (LYRM3), or Complex I-B22 (CI-B22), or NADH-ubiquinone oxidoreductase B22 subunit (UQOR22), is an accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (complex I), and is believed to be not involved in catalysis. In general, accessory subunits are integral for assembly and function of Complex I, which functions in the transfer of electrons from NADH to the respiratory chain. NDUFB9 belongs to the Complex1_LYR-like superfamily that consists of proteins of diverse functions that are exclusively found in eukaryotes and contain the conserved tripeptide 'LYR' close to the N-terminus. Pssm-ID: 380758 Cd Length: 77 Bit Score: 37.54 E-value: 1.96e-04
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| Complex1_LYR_LYRM2 | cd20262 | LYR (leucine-tyrosine-arginine) motif found in LYR motif-containing protein 2 (LYRM2) and ... |
31-94 | 3.53e-04 | ||
LYR (leucine-tyrosine-arginine) motif found in LYR motif-containing protein 2 (LYRM2) and similar proteins; LYRM2 is an uncharacterized LYR motif-containing protein that belongs to the Complex1_LYR-like superfamily which consists of proteins of diverse functions that are exclusively found in eukaryotes; these proteins contain the conserved tripeptide 'LYR' close to the N-terminus. Pssm-ID: 380757 Cd Length: 63 Bit Score: 36.36 E-value: 3.53e-04
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