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Conserved domains on  [gi|186527047|ref|NP_001119319|]
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Disease resistance protein (TIR-NBS-LRR class) family [Arabidopsis thaliana]

Protein Classification

disease resistance family protein( domain architecture ID 1000118)

disease resistance family protein similar to Nicotiana glutinosa TMV resistance protein N; resistance proteins guard the plant against pathogens that contain an appropriate avirulence protein via a direct or indirect interaction with this avirulence protein

Gene Ontology:  GO:0006952

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
PLN03210 super family cl33662
Resistant to P. syringae 6; Provisional
 15-890 4.02e-131

Resistant to P. syringae 6; Provisional


The actual alignment was detected with superfamily member PLN03210:

Pssm-ID: 215633 [Multi-domain]  Cd Length: 1153  Bit Score: 430.07  E-value: 4.02e-131
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047   15 WTYDVFVSFRGADVRKNFLSHLYDSLRRCGISTFMDDvELQRGEYISPELLNAIETSKILIVVLTKDYASSAWCLDELVH 94
Cdd:PLN03210   11 WVYDVFPSFSGEDVRITFLSHFLKELDRKLIIAFKDN-EIERSQSLDPELKQAIRDSRIAVVVFSKNYASSSWCLNELLE 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047   95 IMKShKNNPSHMVFPIFLYVDPSDIRWQQGSYAKSFSKHKNSHPLNKLKDWREALTKVANISGWDIKN-RNEAECIADIT 173
Cdd:PLN03210   90 IVRC-KEELGQLVIPVFYGLDPSHVRKQTGDFGEAFEKTCQNKTEDEKIQWKQALTDVANILGYHSQNwPNEAKMIEEIA 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047  174 REILKRLpcqyLHVPSYA----VGLRSRLQHISSLLSIGSDGVRVIVIYGMGGIGKTTLAKVAFNEFSHLFEGSSFLEnf 249
Cdd:PLN03210  169 NDVLGKL----NLTPSNDfedfVGIEDHIAKMSSLLHLESEEVRMVGIWGSSGIGKTTIARALFSRLSRQFQSSVFID-- 242

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047  250 REY-SKKPEG-----------RTHLQHQLLSDILRRNDIEFKGLDhAVKERFRSKRVLLVVDDVDDVHQLNSAAIDRDCF 317
Cdd:PLN03210  243 RAFiSKSMEIyssanpddynmKLHLQRAFLSEILDKKDIKIYHLG-AMEERLKHRKVLIFIDDLDDQDVLDALAGQTQWF 321

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047  318 GHGSRIIITTRNMHLLKQLRAEGSYSPKELDGDESLELFSWHAFRTSEPPKEFLQHSEEVVTYCAGLPLAVEVLGAFLIE 397
Cdd:PLN03210  322 GSGSRIIVITKDKHFLRAHGIDHIYEVCLPSNELALEMFCRSAFKKNSPPDGFMELASEVALRAGNLPLGLNVLGSYLRG 401

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047  398 RSIREWESTLKLLKRIPNDNIQAKLQISFNALTiEQKD--VFLDIACFFIGVDSYYVACILDGCNLYPDIVLSLLMERCL 475
Cdd:PLN03210  402 RDKEDWMDMLPRLRNGLDGKIEKTLRVSYDGLN-NKKDkaIFRHIACLFNGEKVNDIKLLLANSDLDVNIGLKNLVDKSL 480

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047  476 ITISGNNIMMHDLLRDMGRQIVREISPKKcGERSRLWSHNDVVGVLKKKSGTNAIEGLSLKADVMDFQYFEVEAFAKMQE 555
Cdd:PLN03210  481 IHVREDIVEMHSLLQEMGKEIVRAQSNEP-GEREFLVDAKDICDVLEDNTGTKKVLGITLDIDEIDELHIHENAFKGMRN 559

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047  556 LRLL-----------ELRYvDLNGSYEHFPKDLRWLCWHGFSLECFPINLSLESLAALDLQYSNLKRFWKAQsppQPANM 624
Cdd:PLN03210  560 LLFLkfytkkwdqkkEVRW-HLPEGFDYLPPKLRLLRWDKYPLRCMPSNFRPENLVKLQMQGSKLEKLWDGV---HSLTG 635

                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047  625 VKYLDLSHSVYLRETPDFSYFPNVEKLILINCKSLVLVHKSIGILDkKLVLLNLSSCIELDVLPEEIyKLKSLESLFLSN 704
Cdd:PLN03210  636 LRNIDLRGSKNLKEIPDLSMATNLETLKLSDCSSLVELPSSIQYLN-KLEDLDMSRCENLEILPTGI-NLKSLYRLNLSG 713

                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047  705 CSKLERLDDAlgeLESLTTLLADFTALREIPSTInQLKKLKRLSLNGCKG---------------LLSDDIDNLYSEKSH 769
Cdd:PLN03210  714 CSRLKSFPDI---STNISWLDLDETAIEEFPSNL-RLENLDELILCEMKSeklwervqpltplmtMLSPSLTRLFLSDIP 789

                         810       820       830       840       850       860       870       880
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047  770 SVSLLrPVSLSGLTYMRILSLGYC-NLsdELIPEDIgSLSFLRDLDLRGNSFCNLPTDFATlpNLGELLLSDCSKLQSIL 848
Cdd:PLN03210  790 SLVEL-PSSIQNLHKLEHLEIENCiNL--ETLPTGI-NLESLESLDLSGCSRLRTFPDIST--NISDLNLSRTGIEEVPW 863

                         890       900       910       920
                  ....*....|....*....|....*....|....*....|....*
gi 186527047  849 SLPR--SLLFLDVGKCIMLKR-TPDISKCSALFKLQLNDCISLFE 890
Cdd:PLN03210  864 WIEKfsNLSFLDMNGCNNLQRvSLNISKLKHLETVDFSDCGALTE 908
 
Name Accession Description Interval E-value
PLN03210 PLN03210
Resistant to P. syringae 6; Provisional
 15-890 4.02e-131

Resistant to P. syringae 6; Provisional


Pssm-ID: 215633 [Multi-domain]  Cd Length: 1153  Bit Score: 430.07  E-value: 4.02e-131
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047   15 WTYDVFVSFRGADVRKNFLSHLYDSLRRCGISTFMDDvELQRGEYISPELLNAIETSKILIVVLTKDYASSAWCLDELVH 94
Cdd:PLN03210   11 WVYDVFPSFSGEDVRITFLSHFLKELDRKLIIAFKDN-EIERSQSLDPELKQAIRDSRIAVVVFSKNYASSSWCLNELLE 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047   95 IMKShKNNPSHMVFPIFLYVDPSDIRWQQGSYAKSFSKHKNSHPLNKLKDWREALTKVANISGWDIKN-RNEAECIADIT 173
Cdd:PLN03210   90 IVRC-KEELGQLVIPVFYGLDPSHVRKQTGDFGEAFEKTCQNKTEDEKIQWKQALTDVANILGYHSQNwPNEAKMIEEIA 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047  174 REILKRLpcqyLHVPSYA----VGLRSRLQHISSLLSIGSDGVRVIVIYGMGGIGKTTLAKVAFNEFSHLFEGSSFLEnf 249
Cdd:PLN03210  169 NDVLGKL----NLTPSNDfedfVGIEDHIAKMSSLLHLESEEVRMVGIWGSSGIGKTTIARALFSRLSRQFQSSVFID-- 242

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047  250 REY-SKKPEG-----------RTHLQHQLLSDILRRNDIEFKGLDhAVKERFRSKRVLLVVDDVDDVHQLNSAAIDRDCF 317
Cdd:PLN03210  243 RAFiSKSMEIyssanpddynmKLHLQRAFLSEILDKKDIKIYHLG-AMEERLKHRKVLIFIDDLDDQDVLDALAGQTQWF 321

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047  318 GHGSRIIITTRNMHLLKQLRAEGSYSPKELDGDESLELFSWHAFRTSEPPKEFLQHSEEVVTYCAGLPLAVEVLGAFLIE 397
Cdd:PLN03210  322 GSGSRIIVITKDKHFLRAHGIDHIYEVCLPSNELALEMFCRSAFKKNSPPDGFMELASEVALRAGNLPLGLNVLGSYLRG 401

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047  398 RSIREWESTLKLLKRIPNDNIQAKLQISFNALTiEQKD--VFLDIACFFIGVDSYYVACILDGCNLYPDIVLSLLMERCL 475
Cdd:PLN03210  402 RDKEDWMDMLPRLRNGLDGKIEKTLRVSYDGLN-NKKDkaIFRHIACLFNGEKVNDIKLLLANSDLDVNIGLKNLVDKSL 480

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047  476 ITISGNNIMMHDLLRDMGRQIVREISPKKcGERSRLWSHNDVVGVLKKKSGTNAIEGLSLKADVMDFQYFEVEAFAKMQE 555
Cdd:PLN03210  481 IHVREDIVEMHSLLQEMGKEIVRAQSNEP-GEREFLVDAKDICDVLEDNTGTKKVLGITLDIDEIDELHIHENAFKGMRN 559

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047  556 LRLL-----------ELRYvDLNGSYEHFPKDLRWLCWHGFSLECFPINLSLESLAALDLQYSNLKRFWKAQsppQPANM 624
Cdd:PLN03210  560 LLFLkfytkkwdqkkEVRW-HLPEGFDYLPPKLRLLRWDKYPLRCMPSNFRPENLVKLQMQGSKLEKLWDGV---HSLTG 635

                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047  625 VKYLDLSHSVYLRETPDFSYFPNVEKLILINCKSLVLVHKSIGILDkKLVLLNLSSCIELDVLPEEIyKLKSLESLFLSN 704
Cdd:PLN03210  636 LRNIDLRGSKNLKEIPDLSMATNLETLKLSDCSSLVELPSSIQYLN-KLEDLDMSRCENLEILPTGI-NLKSLYRLNLSG 713

                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047  705 CSKLERLDDAlgeLESLTTLLADFTALREIPSTInQLKKLKRLSLNGCKG---------------LLSDDIDNLYSEKSH 769
Cdd:PLN03210  714 CSRLKSFPDI---STNISWLDLDETAIEEFPSNL-RLENLDELILCEMKSeklwervqpltplmtMLSPSLTRLFLSDIP 789

                         810       820       830       840       850       860       870       880
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047  770 SVSLLrPVSLSGLTYMRILSLGYC-NLsdELIPEDIgSLSFLRDLDLRGNSFCNLPTDFATlpNLGELLLSDCSKLQSIL 848
Cdd:PLN03210  790 SLVEL-PSSIQNLHKLEHLEIENCiNL--ETLPTGI-NLESLESLDLSGCSRLRTFPDIST--NISDLNLSRTGIEEVPW 863

                         890       900       910       920
                  ....*....|....*....|....*....|....*....|....*
gi 186527047  849 SLPR--SLLFLDVGKCIMLKR-TPDISKCSALFKLQLNDCISLFE 890
Cdd:PLN03210  864 WIEKfsNLSFLDMNGCNNLQRvSLNISKLKHLETVDFSDCGALTE 908
TIR pfam01582
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular ...
 17-180 1.69e-53

TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88, interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated, TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn, these associate with various kinases to set off signalling cascades.


Pssm-ID: 396246 [Multi-domain]  Cd Length: 165  Bit Score: 184.11  E-value: 1.69e-53
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047    17 YDVFVSFRGADVRKNFLSHLYDSLRRCGISTFMDDVELQRGEYISPELLNAIETSKILIVVLTKDYASSAWCLDELVHIM 96
Cdd:pfam01582    1 YDVFLSFRGSDTREWFVSHLLKELKQKGIKLFIDDRDLEPGEAIAPELLSAIEKSRRSVVVLSPNYASSGWCLDELVKIL 80

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047    97 KSHKNNPShMVFPIFLYVDPSDIRWQQGSYAKSFSKHKNSHPLNKLKDWREALTKVANIsgWDIKN-RNEAECIADITRE 175
Cdd:pfam01582   81 ECALDLGQ-KVIPIFYEVDPSDVRKQTGSFGKAFKKHKKVLTEEKVLKWRGALNEVANI--WHSKSvSDESKFWKKIAYD 157


                   ....*
gi 186527047   176 ILKRL 180
Cdd:pfam01582  158 ISNKL 162
TIR smart00255
Toll - interleukin 1 - resistance;
16-155 1.94e-33

Toll - interleukin 1 - resistance;


Pssm-ID: 214587 [Multi-domain]  Cd Length: 140  Bit Score: 125.90  E-value: 1.94e-33
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047     16 TYDVFVSFRGA-DVRKNFLSHLYDSLRRCGISTFMDDVELqrGEYISPELLNAIETSKILIVVLTKDYASSAWCLDELVH 94
Cdd:smart00255    1 EYDVFISYSGKeDVRNEFLSHLLEKLRGYGLCVFIDDFEP--GGGDLEEIDEAIEKSRIAIVVLSPNYAESEWCLDELVA 78

                            90       100       110       120       130       140
                    ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 186527047     95 IMKSHKNNPSHMVFPIFLYVDPSDIRWQQGSYAKSFSKH--KNSHPLNKLKdWREALTKVANI 155
Cdd:smart00255   79 ALENALEEGGLRVIPIFYEVIPSDVRKQPGKFRKVFKKNylKWPEDEKEQF-WKKALYAVPSK 140
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
653-840 1.33e-24

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 108.10  E-value: 1.33e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047  653 LINCKSLVLVHKSIGILDKKLVLLNLSSCiELDVLPEEIYKLKSLESLFLSNCsKLERLDDALGELESLTTLLADFTALR 732
Cdd:COG4886    95 LTNLTELDLSGNEELSNLTNLESLDLSGN-QLTDLPEELANLTNLKELDLSNN-QLTDLPEPLGNLTNLKSLDLSNNQLT 172

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047  733 EIPSTINQLKKLKRLSLNGCKgllsddIDNLysekshsvsllrPVSLSGLTYMRILSLGYCNLSDelIPEDIGSLSFLRD 812
Cdd:COG4886   173 DLPEELGNLTNLKELDLSNNQ------ITDL------------PEPLGNLTNLEELDLSGNQLTD--LPEPLANLTNLET 232

                         170       180
                  ....*....|....*....|....*...
gi 186527047  813 LDLRGNSFCNLPtDFATLPNLGELLLSD 840
Cdd:COG4886   233 LDLSNNQLTDLP-ELGNLTNLEELDLSN 259
PPP1R42 cd21340
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ...
 670-824 1.11e-03

protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.


Pssm-ID: 411060 [Multi-domain]  Cd Length: 220  Bit Score: 41.70  E-value: 1.11e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047  670 DKKLVLL-NLSSCIELDVL---------PEEIYKLKSLESLFLSNcSKLERLDDaLGELESLTTLLADFTALREIpSTIN 739
Cdd:cd21340    11 DKNITKIdNLSLCKNLKVLylydnkitkIENLEFLTNLTHLYLQN-NQIEKIEN-LENLVNLKKLYLGGNRISVV-EGLE 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047  740 QLKKLKRLSL------NGCKgLLSDDidnlYSEKSHSVSL------------LRPvsLSGLTYMRILSLGYCNLSD-ELI 800
Cdd:cd21340    88 NLTNLEELHIenqrlpPGEK-LTFDP----RSLAALSNSLrvlnisgnnidsLEP--LAPLRNLEQLDASNNQISDlEEL 160

                         170       180
                  ....*....|....*....|....
gi 186527047  801 PEDIGSLSFLRDLDLRGNSFCNLP 824
Cdd:cd21340   161 LDLLSSWPSLRELDLTGNPVCKKP 184
 
Name Accession Description Interval E-value
PLN03210 PLN03210
Resistant to P. syringae 6; Provisional
 15-890 4.02e-131

Resistant to P. syringae 6; Provisional


Pssm-ID: 215633 [Multi-domain]  Cd Length: 1153  Bit Score: 430.07  E-value: 4.02e-131
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047   15 WTYDVFVSFRGADVRKNFLSHLYDSLRRCGISTFMDDvELQRGEYISPELLNAIETSKILIVVLTKDYASSAWCLDELVH 94
Cdd:PLN03210   11 WVYDVFPSFSGEDVRITFLSHFLKELDRKLIIAFKDN-EIERSQSLDPELKQAIRDSRIAVVVFSKNYASSSWCLNELLE 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047   95 IMKShKNNPSHMVFPIFLYVDPSDIRWQQGSYAKSFSKHKNSHPLNKLKDWREALTKVANISGWDIKN-RNEAECIADIT 173
Cdd:PLN03210   90 IVRC-KEELGQLVIPVFYGLDPSHVRKQTGDFGEAFEKTCQNKTEDEKIQWKQALTDVANILGYHSQNwPNEAKMIEEIA 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047  174 REILKRLpcqyLHVPSYA----VGLRSRLQHISSLLSIGSDGVRVIVIYGMGGIGKTTLAKVAFNEFSHLFEGSSFLEnf 249
Cdd:PLN03210  169 NDVLGKL----NLTPSNDfedfVGIEDHIAKMSSLLHLESEEVRMVGIWGSSGIGKTTIARALFSRLSRQFQSSVFID-- 242

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047  250 REY-SKKPEG-----------RTHLQHQLLSDILRRNDIEFKGLDhAVKERFRSKRVLLVVDDVDDVHQLNSAAIDRDCF 317
Cdd:PLN03210  243 RAFiSKSMEIyssanpddynmKLHLQRAFLSEILDKKDIKIYHLG-AMEERLKHRKVLIFIDDLDDQDVLDALAGQTQWF 321

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047  318 GHGSRIIITTRNMHLLKQLRAEGSYSPKELDGDESLELFSWHAFRTSEPPKEFLQHSEEVVTYCAGLPLAVEVLGAFLIE 397
Cdd:PLN03210  322 GSGSRIIVITKDKHFLRAHGIDHIYEVCLPSNELALEMFCRSAFKKNSPPDGFMELASEVALRAGNLPLGLNVLGSYLRG 401

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047  398 RSIREWESTLKLLKRIPNDNIQAKLQISFNALTiEQKD--VFLDIACFFIGVDSYYVACILDGCNLYPDIVLSLLMERCL 475
Cdd:PLN03210  402 RDKEDWMDMLPRLRNGLDGKIEKTLRVSYDGLN-NKKDkaIFRHIACLFNGEKVNDIKLLLANSDLDVNIGLKNLVDKSL 480

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047  476 ITISGNNIMMHDLLRDMGRQIVREISPKKcGERSRLWSHNDVVGVLKKKSGTNAIEGLSLKADVMDFQYFEVEAFAKMQE 555
Cdd:PLN03210  481 IHVREDIVEMHSLLQEMGKEIVRAQSNEP-GEREFLVDAKDICDVLEDNTGTKKVLGITLDIDEIDELHIHENAFKGMRN 559

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047  556 LRLL-----------ELRYvDLNGSYEHFPKDLRWLCWHGFSLECFPINLSLESLAALDLQYSNLKRFWKAQsppQPANM 624
Cdd:PLN03210  560 LLFLkfytkkwdqkkEVRW-HLPEGFDYLPPKLRLLRWDKYPLRCMPSNFRPENLVKLQMQGSKLEKLWDGV---HSLTG 635

                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047  625 VKYLDLSHSVYLRETPDFSYFPNVEKLILINCKSLVLVHKSIGILDkKLVLLNLSSCIELDVLPEEIyKLKSLESLFLSN 704
Cdd:PLN03210  636 LRNIDLRGSKNLKEIPDLSMATNLETLKLSDCSSLVELPSSIQYLN-KLEDLDMSRCENLEILPTGI-NLKSLYRLNLSG 713

                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047  705 CSKLERLDDAlgeLESLTTLLADFTALREIPSTInQLKKLKRLSLNGCKG---------------LLSDDIDNLYSEKSH 769
Cdd:PLN03210  714 CSRLKSFPDI---STNISWLDLDETAIEEFPSNL-RLENLDELILCEMKSeklwervqpltplmtMLSPSLTRLFLSDIP 789

                         810       820       830       840       850       860       870       880
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047  770 SVSLLrPVSLSGLTYMRILSLGYC-NLsdELIPEDIgSLSFLRDLDLRGNSFCNLPTDFATlpNLGELLLSDCSKLQSIL 848
Cdd:PLN03210  790 SLVEL-PSSIQNLHKLEHLEIENCiNL--ETLPTGI-NLESLESLDLSGCSRLRTFPDIST--NISDLNLSRTGIEEVPW 863

                         890       900       910       920
                  ....*....|....*....|....*....|....*....|....*
gi 186527047  849 SLPR--SLLFLDVGKCIMLKR-TPDISKCSALFKLQLNDCISLFE 890
Cdd:PLN03210  864 WIEKfsNLSFLDMNGCNNLQRvSLNISKLKHLETVDFSDCGALTE 908
TIR pfam01582
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular ...
 17-180 1.69e-53

TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88, interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated, TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn, these associate with various kinases to set off signalling cascades.


Pssm-ID: 396246 [Multi-domain]  Cd Length: 165  Bit Score: 184.11  E-value: 1.69e-53
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047    17 YDVFVSFRGADVRKNFLSHLYDSLRRCGISTFMDDVELQRGEYISPELLNAIETSKILIVVLTKDYASSAWCLDELVHIM 96
Cdd:pfam01582    1 YDVFLSFRGSDTREWFVSHLLKELKQKGIKLFIDDRDLEPGEAIAPELLSAIEKSRRSVVVLSPNYASSGWCLDELVKIL 80

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047    97 KSHKNNPShMVFPIFLYVDPSDIRWQQGSYAKSFSKHKNSHPLNKLKDWREALTKVANIsgWDIKN-RNEAECIADITRE 175
Cdd:pfam01582   81 ECALDLGQ-KVIPIFYEVDPSDVRKQTGSFGKAFKKHKKVLTEEKVLKWRGALNEVANI--WHSKSvSDESKFWKKIAYD 157


                   ....*
gi 186527047   176 ILKRL 180
Cdd:pfam01582  158 ISNKL 162
TIR smart00255
Toll - interleukin 1 - resistance;
16-155 1.94e-33

Toll - interleukin 1 - resistance;


Pssm-ID: 214587 [Multi-domain]  Cd Length: 140  Bit Score: 125.90  E-value: 1.94e-33
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047     16 TYDVFVSFRGA-DVRKNFLSHLYDSLRRCGISTFMDDVELqrGEYISPELLNAIETSKILIVVLTKDYASSAWCLDELVH 94
Cdd:smart00255    1 EYDVFISYSGKeDVRNEFLSHLLEKLRGYGLCVFIDDFEP--GGGDLEEIDEAIEKSRIAIVVLSPNYAESEWCLDELVA 78

                            90       100       110       120       130       140
                    ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 186527047     95 IMKSHKNNPSHMVFPIFLYVDPSDIRWQQGSYAKSFSKH--KNSHPLNKLKdWREALTKVANI 155
Cdd:smart00255   79 ALENALEEGGLRVIPIFYEVIPSDVRKQPGKFRKVFKKNylKWPEDEKEQF-WKKALYAVPSK 140
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
653-840 1.33e-24

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 108.10  E-value: 1.33e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047  653 LINCKSLVLVHKSIGILDKKLVLLNLSSCiELDVLPEEIYKLKSLESLFLSNCsKLERLDDALGELESLTTLLADFTALR 732
Cdd:COG4886    95 LTNLTELDLSGNEELSNLTNLESLDLSGN-QLTDLPEELANLTNLKELDLSNN-QLTDLPEPLGNLTNLKSLDLSNNQLT 172

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047  733 EIPSTINQLKKLKRLSLNGCKgllsddIDNLysekshsvsllrPVSLSGLTYMRILSLGYCNLSDelIPEDIGSLSFLRD 812
Cdd:COG4886   173 DLPEELGNLTNLKELDLSNNQ------ITDL------------PEPLGNLTNLEELDLSGNQLTD--LPEPLANLTNLET 232

                         170       180
                  ....*....|....*....|....*...
gi 186527047  813 LDLRGNSFCNLPtDFATLPNLGELLLSD 840
Cdd:COG4886   233 LDLSNNQLTDLP-ELGNLTNLEELDLSN 259
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
623-912 1.35e-20

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 95.77  E-value: 1.35e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047  623 NMVKYLDLSHSVYLRETPDFSYFPNVEKLILINCKSLVLVHKSIGILDKKLVLLNLSSCIELDVLPEEIYKLKSLESLFL 702
Cdd:COG4886    24 LILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDL 103

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047  703 SNC------SKLERLD----------DALGELESLTTLLADFTALREIPSTINQLKKLKRLSLNGCKgllsddIDNLyse 766
Cdd:COG4886   104 SGNeelsnlTNLESLDlsgnqltdlpEELANLTNLKELDLSNNQLTDLPEPLGNLTNLKSLDLSNNQ------LTDL--- 174

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047  767 kshsvsllrPVSLSGLTYMRILSLGYCNLSDelIPEDIGSLSFLRDLDLRGNSFCNLPTDFATLPNLGELLLSDCsKLQS 846
Cdd:COG4886   175 ---------PEELGNLTNLKELDLSNNQITD--LPEPLGNLTNLEELDLSGNQLTDLPEPLANLTNLETLDLSNN-QLTD 242

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 186527047  847 IlslprsllfldvgkcimlkrtPDISKCSALFKLQLNDCiSLFEIPGIHNHEYLSFIVLDGCKLAS 912
Cdd:COG4886   243 L---------------------PELGNLTNLEELDLSNN-QLTDLPPLANLTNLKTLDLSNNQLTD 286
NB-ARC pfam00931
NB-ARC domain;
209-427 2.76e-17

NB-ARC domain;


Pssm-ID: 395745 [Multi-domain]  Cd Length: 245  Bit Score: 82.81  E-value: 2.76e-17
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047   209 SDGVRVIVIYGMGGIGKTTLAKVAFNEFS---HLFEGSSFLENFREYSKKpegrtHLQHQLLSDILRRNDIEFKGLDHAV 285
Cdd:pfam00931   15 KDEPGIVGIHGMGGVGKTTLAAQIFNDFDeveGHFDSVAWVVVSKTFTIS-----TLQQTILQNLGLSEDDWDNKEEGEL 89

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047   286 KERFR----SKRVLLVVDDVDDVHQLNSAAIDRDCFGHGSRIIITTRNMHLLKQLRAEgSYSPKE--LDGDESLELFSWH 359
Cdd:pfam00931   90 ARKIRrallTKRFLLVLDDVWDEEDWDKIGIPLPDRENGCRVLLTTRSEEVAGRVGGP-SDPHEVelLEPDEAWELFENK 168

                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 186527047   360 AFRTSEPPKEFLQH-SEEVVTYCAGLPLAVEVLGAFLIERS-IREWESTLKLLKRIPN------DNIQAKLQISFN 427
Cdd:pfam00931  169 VFPKTLGECELLEDvAKEIVEKCRGLPLALKVLGGLLSCKKtVEEWKHVYDVLQSELKsnsyslNSVRSILQLSYE 244
TIR_2 pfam13676
TIR domain; This is a family of Toll-like receptors.
 19-112 9.01e-16

TIR domain; This is a family of Toll-like receptors.


Pssm-ID: 463954 [Multi-domain]  Cd Length: 118  Bit Score: 74.66  E-value: 9.01e-16
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047    19 VFVSFRGADvrKNFLSHLYDSLRRCGISTFMDDVELQRGEYISPELLNAIETSKILIVVLTKDYASSAWCLDELVHIMKS 98
Cdd:pfam13676    1 VFISYAGED--RAWAEWLADALEAAGYRVWLDRWDIRPGDDWVEEIEEAIENSDRVLVVLSPNYLESPWCRAEWEAALAD 78

                           90
                   ....*....|....
gi 186527047    99 HKNNPShmVFPIFL 112
Cdd:pfam13676   79 PEGRKR--LIPVRL 90
PLN03194 PLN03194
putative disease resistance protein; Provisional
 18-180 5.47e-15

putative disease resistance protein; Provisional


Pssm-ID: 215626 [Multi-domain]  Cd Length: 187  Bit Score: 74.47  E-value: 5.47e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047   18 DVFVSFRGADVRKNFLSHLYDSLRRCGISTFMDDVELQRGEYISPELLNAIETSKILIVVLTKDYASSAWCLDELVHIMK 97
Cdd:PLN03194   28 DVFINHRGIDTKRTIATLLYDHLSRLNLRPFLDNKNMKPGDKLFDKINSAIRNCKVGVAVFSPRYCESYFCLHELALIME 107

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047   98 SHKNnpshmVFPIFLYVDPSDIRwqqgsyaksfSKHKNSHPLNKLKDWREALTKVANISG--WDIKNRNEAECIADITRE 175
Cdd:PLN03194  108 SKKR-----VIPIFCDVKPSQLR----------VVDNGTCPDEEIRRFNWALEEAKYTVGltFDSLKGNWSEVVTMASDA 172


                  ....*
gi 186527047  176 ILKRL 180
Cdd:PLN03194  173 VIKNL 177
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
647-912 9.88e-11

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 65.34  E-value: 9.88e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047  647 NVEKLILINCKSLVLVHKSIGILDKKLVLLNLSSCIELDVLPEEIYKLKSLESLFLSNCSKLERLDDALGELESLTTLLA 726
Cdd:COG4886     1 LLLLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047  727 DFTALREIPSTINQLKKLKRLSLNGCKGLlsddidnlysekshsvsllrpvslSGLTYMRILSLGYCNLSDelIPEDIGS 806
Cdd:COG4886    81 LLSLLLLGLTDLGDLTNLTELDLSGNEEL------------------------SNLTNLESLDLSGNQLTD--LPEELAN 134

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047  807 LSFLRDLDLRGNSFCNLPTDFATLPNLGELLLSD------------CSKLQS-------ILSLPRSLlfldvGKCIMLKR 867
Cdd:COG4886   135 LTNLKELDLSNNQLTDLPEPLGNLTNLKSLDLSNnqltdlpeelgnLTNLKEldlsnnqITDLPEPL-----GNLTNLEE 209

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 186527047  868 -----------TPDISKCSALFKLQLNDCiSLFEIPGIHNHEYLSFIVLDGCKLAS 912
Cdd:COG4886   210 ldlsgnqltdlPEPLANLTNLETLDLSNN-QLTDLPELGNLTNLEELDLSNNQLTD 264
COG4916 COG4916
Uncharacterized conserved protein [Function unknown];
17-112 4.86e-05

Uncharacterized conserved protein [Function unknown];


Pssm-ID: 443944 [Multi-domain]  Cd Length: 236  Bit Score: 46.26  E-value: 4.86e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047   17 YDVFVSFRGADvrKNFLSHLYDSLRRCGISTFMD---DVELQRGEyiSPELLNAI--ETSKILIVVLTKDYASSAWCLDE 91
Cdd:COG4916     1 YDVALSFAGED--REFVERVAEALKARGIKVFYDeneEAELWGKD--LDEYLQDIyrSESRFVVVFLSKDYVEKKWTGLE 76

                          90       100
                  ....*....|....*....|.
gi 186527047   92 LVHIMKSHKNNPSHMVFPIFL 112
Cdd:COG4916    77 RRAALARAMQRKKEYILPIRL 97
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 676-858 2.65e-04

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 45.22  E-value: 2.65e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047  676 LNLSSCIELDVLPEEIYKL-KSLESLFLSNCSKLERLDDalGELESLTTL-LADFTALREIPSTINQLKKLKRLSLNG-- 751
Cdd:PLN00113   98 INLSNNQLSGPIPDDIFTTsSSLRYLNLSNNNFTGSIPR--GSIPNLETLdLSNNMLSGEIPNDIGSFSSLKVLDLGGnv 175

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047  752 CKGLLSDDIDNLYSEK-----SHSVSLLRPVSLSGLTYMRILSLGYCNLSDElIPEDIGSLSFLRDLDLRGNSFCN-LPT 825
Cdd:PLN00113  176 LVGKIPNSLTNLTSLEfltlaSNQLVGQIPRELGQMKSLKWIYLGYNNLSGE-IPYEIGGLTSLNHLDLVYNNLTGpIPS 254

                         170       180       190
                  ....*....|....*....|....*....|....*...
gi 186527047  826 DFATLPNLGELLLSDcSKL-----QSILSLpRSLLFLD 858
Cdd:PLN00113  255 SLGNLKNLQYLFLYQ-NKLsgpipPSIFSL-QKLISLD 290
PLN03150 PLN03150
hypothetical protein; Provisional
 734-819 5.54e-04

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 44.04  E-value: 5.54e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047  734 IPSTINQLKKLKRLSLNGckgllsddidnlyseksHSVSLLRPVSLSGLTYMRILSLGYCNLSDeLIPEDIGSLSFLRDL 813
Cdd:PLN03150  434 IPNDISKLRHLQSINLSG-----------------NSIRGNIPPSLGSITSLEVLDLSYNSFNG-SIPESLGQLTSLRIL 495


                  ....*.
gi 186527047  814 DLRGNS 819
Cdd:PLN03150  496 NLNGNS 501
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 575-883 9.20e-04

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 43.68  E-value: 9.20e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047  575 KDLRW--LCWHGFSLEcFPINLS-LESLAALDLQYSNLkrfwKAQSPPQPANMvkyldlshsvylretpdfsyfPNVEKL 651
Cdd:PLN00113  212 KSLKWiyLGYNNLSGE-IPYEIGgLTSLNHLDLVYNNL----TGPIPSSLGNL---------------------KNLQYL 265

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047  652 ILINCKSLVLVHKSIGILdKKLVLLNLSSCIELDVLPEEIYKLKSLESLFL-SNcsklerlddalgeleslttllaDFTA 730
Cdd:PLN00113  266 FLYQNKLSGPIPPSIFSL-QKLISLDLSDNSLSGEIPELVIQLQNLEILHLfSN----------------------NFTG 322

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047  731 lrEIPSTINQLKKLKRLSLNGCKglLSDDI-DNLYSEKSHSVSLLRPVSLSGLTYMRILSLG-------YCNLSDELIPE 802
Cdd:PLN00113  323 --KIPVALTSLPRLQVLQLWSNK--FSGEIpKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGnlfklilFSNSLEGEIPK 398

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047  803 DIGSLSFLRDLDLRGNSFC-NLPTDFATLPNLGELLLSDcSKLQSILSLPR----SLLFLDVGKCIMLKRTPDISKCSAL 877
Cdd:PLN00113  399 SLGACRSLRRVRLQDNSFSgELPSEFTKLPLVYFLDISN-NNLQGRINSRKwdmpSLQMLSLARNKFFGGLPDSFGSKRL 477


                  ....*.
gi 186527047  878 FKLQLN 883
Cdd:PLN00113  478 ENLDLS 483
PPP1R42 cd21340
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ...
 670-824 1.11e-03

protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.


Pssm-ID: 411060 [Multi-domain]  Cd Length: 220  Bit Score: 41.70  E-value: 1.11e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047  670 DKKLVLL-NLSSCIELDVL---------PEEIYKLKSLESLFLSNcSKLERLDDaLGELESLTTLLADFTALREIpSTIN 739
Cdd:cd21340    11 DKNITKIdNLSLCKNLKVLylydnkitkIENLEFLTNLTHLYLQN-NQIEKIEN-LENLVNLKKLYLGGNRISVV-EGLE 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 186527047  740 QLKKLKRLSL------NGCKgLLSDDidnlYSEKSHSVSL------------LRPvsLSGLTYMRILSLGYCNLSD-ELI 800
Cdd:cd21340    88 NLTNLEELHIenqrlpPGEK-LTFDP----RSLAALSNSLrvlnisgnnidsLEP--LAPLRNLEQLDASNNQISDlEEL 160

                         170       180
                  ....*....|....*....|....
gi 186527047  801 PEDIGSLSFLRDLDLRGNSFCNLP 824
Cdd:cd21340   161 LDLLSSWPSLRELDLTGNPVCKKP 184
PLN03150 PLN03150
hypothetical protein; Provisional
 686-751 1.22e-03

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 42.88  E-value: 1.22e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 186527047  686 VLPEEIYKLKSLESLFLSNCSKLERLDDALGELESLTTLLADFTALR-EIPSTINQLKKLKRLSLNG 751
Cdd:PLN03150  433 FIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNgSIPESLGQLTSLRILNLNG 499
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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