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Conserved domains on  [gi|219277692|ref|NP_001102094|]
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NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial [Rattus norvegicus]

Protein Classification

NADH_B2 domain-containing protein( domain architecture ID 10632392)

NADH_B2 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
NADH_B2 pfam14813
NADH dehydrogenase 1 beta subcomplex subunit 2; This family represents an accessory subunit of ...
 37-104 1.25e-38

NADH dehydrogenase 1 beta subcomplex subunit 2; This family represents an accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis.


:

Pssm-ID: 464329  Cd Length: 69  Bit Score: 123.63  E-value: 1.25e-38
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 219277692   37 GGHIQPRYRE-FPQLTQSQVIHGEVLSSLMWFWILWRFWHDSDAVLGHFSYPDPSKWTDEELGVPPDDE 104
Cdd:pfam14813   1 RVHHEPSYRQgFPQLTKSQVIGAEVLSGAMWWWILWHLWHDPDHILGEFPYPDPSKWTDEELGIPPDDE 69
 
Name Accession Description Interval E-value
NADH_B2 pfam14813
NADH dehydrogenase 1 beta subcomplex subunit 2; This family represents an accessory subunit of ...
 37-104 1.25e-38

NADH dehydrogenase 1 beta subcomplex subunit 2; This family represents an accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis.


Pssm-ID: 464329  Cd Length: 69  Bit Score: 123.63  E-value: 1.25e-38
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 219277692   37 GGHIQPRYRE-FPQLTQSQVIHGEVLSSLMWFWILWRFWHDSDAVLGHFSYPDPSKWTDEELGVPPDDE 104
Cdd:pfam14813   1 RVHHEPSYRQgFPQLTKSQVIGAEVLSGAMWWWILWHLWHDPDHILGEFPYPDPSKWTDEELGIPPDDE 69
 
Name Accession Description Interval E-value
NADH_B2 pfam14813
NADH dehydrogenase 1 beta subcomplex subunit 2; This family represents an accessory subunit of ...
 37-104 1.25e-38

NADH dehydrogenase 1 beta subcomplex subunit 2; This family represents an accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis.


Pssm-ID: 464329  Cd Length: 69  Bit Score: 123.63  E-value: 1.25e-38
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 219277692   37 GGHIQPRYRE-FPQLTQSQVIHGEVLSSLMWFWILWRFWHDSDAVLGHFSYPDPSKWTDEELGVPPDDE 104
Cdd:pfam14813   1 RVHHEPSYRQgFPQLTKSQVIGAEVLSGAMWWWILWHLWHDPDHILGEFPYPDPSKWTDEELGIPPDDE 69
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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