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Conserved domains on  [gi|157818329|ref|NP_001101146|]
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proline and serine-rich protein 1 [Rattus norvegicus]

Protein Classification

DUF4476 domain-containing protein( domain architecture ID 10632145)

DUF4476 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF4476 pfam14771
Domain of unknown function (DUF4476);
29-121 2.16e-18

Domain of unknown function (DUF4476);


:

Pssm-ID: 434196  Cd Length: 91  Bit Score: 80.69  E-value: 2.16e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329   29 VHGYFSSEQVVDLLRYFSWAEPQLKAMK-ALQHKMVAVhpAEVVSILSCFTFSKDKLAALELLASNIVDAQNSRPIEDLF 107
Cdd:pfam14771   1 VMSDNDFDQLVEKLKRFSFDDDKLKLLEqALLNNYFTC--SQAAQLLKIFSFDDDRLKALKLLYPNIVDKQNYEVIIDVF 78

                          90
                  ....*....|....
gi 157818329  108 RINmSEKKRCKRVL 121
Cdd:pfam14771  79 TFS-SDKDKAREIL 91
PHA03247 super family cl33720
large tegument protein UL36; Provisional
 298-827 5.12e-14

large tegument protein UL36; Provisional


The actual alignment was detected with superfamily member PHA03247:

Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 76.90  E-value: 5.12e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  298 PSVSAAATGAGMSAPNTPLAvfpTPQPSTPNPTVI--RTPSVPATPVTSTHSTTPAPVPSVFSGLVPLPGLSATPTPST- 374
Cdd:PHA03247 2489 PFAAGAAPDPGGGGPPDPDA---PPAPSRLAPAILpdEPVGEPVHPRMLTWIRGLEELASDDAGDPPPPLPPAAPPAAPd 2565

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  375 QAISIPRVTLASSETFASTCAPFTShslASSTAGSASNPITAPLSSVFAGLPLPFPPASHSIATPTPSVIASATGPLGVN 454
Cdd:PHA03247 2566 RSVPPPRPAPRPSEPAVTSRARRPD---APPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHP 2642

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  455 SplLSALKGFLTSNDTHLINSSGLPSAVTSGLASLSSLPSRNSDSPA------SVTNKCYPPAAVPTAQRSSTPGLAMFP 528
Cdd:PHA03247 2643 P--PTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAarptvgSLTSLADPPPPPPTPEPAPHALVSATP 2720

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  529 GLQSPVASATSAAPTLPAQSPLVTPSSTAVPVscgssgsllhGPHAGGISSVPAAATMPVMIKSEPTSPPPSAFKGPAHP 608
Cdd:PHA03247 2721 LPPGPAAARQASPALPAAPAPPAVPAGPATPG----------GPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVAS 2790

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  609 GTPAHGTLGLSgalgrgyPTTSVPISVPTCLNPALSGLSSLSTPLAGSMSLTPHASSTPIAPVFTALPPFTSLTNSFPL- 687
Cdd:PHA03247 2791 LSESRESLPSP-------WDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVr 2863

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  688 ----PGSPSLNPAVSlTGPSTTTSAAVHPSSATVRTVLPTTN----SSPAAFPLNLSTAVPSLFAVTQGPLPTsnPSYPG 759
Cdd:PHA03247 2864 rrppSRSPAAKPAAP-ARPPVRRLARPAVSRSTESFALPPDQperpPQPQAPPPPQPQPQPPPPPQPQPPPPP--PPRPQ 2940

                         490       500       510       520       530       540       550
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 157818329  760 FPVSSAPSGAPTLPSFPGLQAPSTVAVTPLPVAAS---APSPAPVLPGFASAFSSNFNSALVAQAGLSSGL 827
Cdd:PHA03247 2941 PPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPrfrVPQPAPSREAPASSTPPLTGHSLSRVSSWASSL 3011
PRK10263 super family cl35903
DNA translocase FtsK; Provisional
 184-336 7.26e-03

DNA translocase FtsK; Provisional


The actual alignment was detected with superfamily member PRK10263:

Pssm-ID: 236669 [Multi-domain]  Cd Length: 1355  Bit Score: 40.45  E-value: 7.26e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  184 GPSKPPPSTYNPHKPVPYPIPPCRPHatIAPSAYNNAGLVPLANVIAPGVPPPPP-----YTPNPAGADNEDLSSQSKPT 258
Cdd:PRK10263  453 QSTFAPQSTYQTEQTYQQPAAQEPLY--QQPQPVEQQPVVEPEPVVEETKPARPPlyyfeEVEEKRAREREQLAAWYQPI 530

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  259 QSQTFSTAASQLFSPHGSNPSTPAATPVPAVSPAKAVNHPSVSAAATGAGMSAPNTPLAV--FPTPQ------PSTPNPT 330
Cdd:PRK10263  531 PEPVKEPEPIKSSLKAPSVAAVPPVEAAAAVSPLASGVKKATLATGAAATVAAPVFSLANsgGPRPQvkegigPQLPRPK 610


                  ....*.
gi 157818329  331 VIRTPS 336
Cdd:PRK10263  611 RIRVPT 616
 
Name Accession Description Interval E-value
DUF4476 pfam14771
Domain of unknown function (DUF4476);
29-121 2.16e-18

Domain of unknown function (DUF4476);


Pssm-ID: 434196  Cd Length: 91  Bit Score: 80.69  E-value: 2.16e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329   29 VHGYFSSEQVVDLLRYFSWAEPQLKAMK-ALQHKMVAVhpAEVVSILSCFTFSKDKLAALELLASNIVDAQNSRPIEDLF 107
Cdd:pfam14771   1 VMSDNDFDQLVEKLKRFSFDDDKLKLLEqALLNNYFTC--SQAAQLLKIFSFDDDRLKALKLLYPNIVDKQNYEVIIDVF 78

                          90
                  ....*....|....
gi 157818329  108 RINmSEKKRCKRVL 121
Cdd:pfam14771  79 TFS-SDKDKAREIL 91
PHA03247 PHA03247
large tegument protein UL36; Provisional
 298-827 5.12e-14

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 76.90  E-value: 5.12e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  298 PSVSAAATGAGMSAPNTPLAvfpTPQPSTPNPTVI--RTPSVPATPVTSTHSTTPAPVPSVFSGLVPLPGLSATPTPST- 374
Cdd:PHA03247 2489 PFAAGAAPDPGGGGPPDPDA---PPAPSRLAPAILpdEPVGEPVHPRMLTWIRGLEELASDDAGDPPPPLPPAAPPAAPd 2565

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  375 QAISIPRVTLASSETFASTCAPFTShslASSTAGSASNPITAPLSSVFAGLPLPFPPASHSIATPTPSVIASATGPLGVN 454
Cdd:PHA03247 2566 RSVPPPRPAPRPSEPAVTSRARRPD---APPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHP 2642

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  455 SplLSALKGFLTSNDTHLINSSGLPSAVTSGLASLSSLPSRNSDSPA------SVTNKCYPPAAVPTAQRSSTPGLAMFP 528
Cdd:PHA03247 2643 P--PTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAarptvgSLTSLADPPPPPPTPEPAPHALVSATP 2720

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  529 GLQSPVASATSAAPTLPAQSPLVTPSSTAVPVscgssgsllhGPHAGGISSVPAAATMPVMIKSEPTSPPPSAFKGPAHP 608
Cdd:PHA03247 2721 LPPGPAAARQASPALPAAPAPPAVPAGPATPG----------GPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVAS 2790

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  609 GTPAHGTLGLSgalgrgyPTTSVPISVPTCLNPALSGLSSLSTPLAGSMSLTPHASSTPIAPVFTALPPFTSLTNSFPL- 687
Cdd:PHA03247 2791 LSESRESLPSP-------WDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVr 2863

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  688 ----PGSPSLNPAVSlTGPSTTTSAAVHPSSATVRTVLPTTN----SSPAAFPLNLSTAVPSLFAVTQGPLPTsnPSYPG 759
Cdd:PHA03247 2864 rrppSRSPAAKPAAP-ARPPVRRLARPAVSRSTESFALPPDQperpPQPQAPPPPQPQPQPPPPPQPQPPPPP--PPRPQ 2940

                         490       500       510       520       530       540       550
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 157818329  760 FPVSSAPSGAPTLPSFPGLQAPSTVAVTPLPVAAS---APSPAPVLPGFASAFSSNFNSALVAQAGLSSGL 827
Cdd:PHA03247 2941 PPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPrfrVPQPAPSREAPASSTPPLTGHSLSRVSSWASSL 3011
Herpes_BLLF1 pfam05109
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ...
 438-783 7.63e-06

Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.


Pssm-ID: 282904 [Multi-domain]  Cd Length: 886  Bit Score: 49.91  E-value: 7.63e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  438 TPTPSVIASATGPLGVNSPLLSALKGFLTSNDTHLINSSGLPSAVTSGLASLSSLPSRN--SDSPASVTNKCYPPAAVPT 515
Cdd:pfam05109 414 TTTHKVIFSKAPESTTTSPTLNTTGFAAPNTTTGLPSSTHVPTNLTAPASTGPTVSTADvtSPTPAGTTSGASPVTPSPS 493

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  516 AQRSSTPGLAmfPGLQSPVASATSAAPTLPAQSPLV---TPSSTAVPVSCGSSGSLLHGPHAGGISSVPAA------ATM 586
Cdd:pfam05109 494 PRDNGTESKA--PDMTSPTSAVTTPTPNATSPTPAVttpTPNATSPTLGKTSPTSAVTTPTPNATSPTPAVttptpnATI 571

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  587 PVMIKSEPTS----PPPSAFKGPAHPGTPAHGTLGLSGALGRGYPTTSVPISVPTclNPALSGLSSLSTPLAGSMSLTPH 662
Cdd:pfam05109 572 PTLGKTSPTSavttPTPNATSPTVGETSPQANTTNHTLGGTSSTPVVTSPPKNAT--SAVTTGQHNITSSSTSSMSLRPS 649

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  663 ASSTPIAPVFTalppfTSLTNSFPLPGS--PSLNPAVSLTGPSTTTSAAVHPSSATVRtvlpTTNSSPAAFPLNLSTAV- 739
Cdd:pfam05109 650 SISETLSPSTS-----DNSTSHMPLLTSahPTGGENITQVTPASTSTHHVSTSSPAPR----PGTTSQASGPGNSSTSTk 720

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....
gi 157818329  740 PSLFAVTQGPlPTSNPSYPGFPvSSAPSGAPTLPSFPGLQAPST 783
Cdd:pfam05109 721 PGEVNVTKGT-PPKNATSPQAP-SGQKTAVPTVTSTGGKANSTT 762
Chi1 COG3469
Chitinase [Carbohydrate transport and metabolism];
257-465 4.95e-04

Chitinase [Carbohydrate transport and metabolism];


Pssm-ID: 442692 [Multi-domain]  Cd Length: 534  Bit Score: 43.59  E-value: 4.95e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329 257 PTQSQTFSTAASQLFSPHGSNPSTPAATPVPAVSPAKAVNHPSVSAAATGAGMSAPNTPLAVFPTPQPSTPNPTVIRTPS 336
Cdd:COG3469   16 SATAVTLLGAAATAASVTLTAATATTVVSTTGSVVVAASGSAGSGTGTTAASSTAATSSTTSTTATATAAAAAATSTSAT 95

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329 337 VPATPVTSTHSTTPAPVPSVFSGLVPLPGLSATPTPSTQAISIPRVTLASSETFASTCAPFTSHSLASSTAGSASNPITA 416
Cdd:COG3469   96 LVATSTASGANTGTSTVTTTSTGAGSVTSTTSSTAGSTTTSGASATSSAGSTTTTTTVSGTETATGGTTTTSTTTTTTSA 175

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*....
gi 157818329 417 PLSSVFAGlplPFPPASHSIATPTPSVIASATGPLGVNSPLLSALKGFL 465
Cdd:COG3469  176 STTPSATT---TATATTASGATTPSATTTATTTGPPTPGLPKHVLVGYW 221
PRK10263 PRK10263
DNA translocase FtsK; Provisional
 184-336 7.26e-03

DNA translocase FtsK; Provisional


Pssm-ID: 236669 [Multi-domain]  Cd Length: 1355  Bit Score: 40.45  E-value: 7.26e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  184 GPSKPPPSTYNPHKPVPYPIPPCRPHatIAPSAYNNAGLVPLANVIAPGVPPPPP-----YTPNPAGADNEDLSSQSKPT 258
Cdd:PRK10263  453 QSTFAPQSTYQTEQTYQQPAAQEPLY--QQPQPVEQQPVVEPEPVVEETKPARPPlyyfeEVEEKRAREREQLAAWYQPI 530

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  259 QSQTFSTAASQLFSPHGSNPSTPAATPVPAVSPAKAVNHPSVSAAATGAGMSAPNTPLAV--FPTPQ------PSTPNPT 330
Cdd:PRK10263  531 PEPVKEPEPIKSSLKAPSVAAVPPVEAAAAVSPLASGVKKATLATGAAATVAAPVFSLANsgGPRPQvkegigPQLPRPK 610


                  ....*.
gi 157818329  331 VIRTPS 336
Cdd:PRK10263  611 RIRVPT 616
 
Name Accession Description Interval E-value
DUF4476 pfam14771
Domain of unknown function (DUF4476);
29-121 2.16e-18

Domain of unknown function (DUF4476);


Pssm-ID: 434196  Cd Length: 91  Bit Score: 80.69  E-value: 2.16e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329   29 VHGYFSSEQVVDLLRYFSWAEPQLKAMK-ALQHKMVAVhpAEVVSILSCFTFSKDKLAALELLASNIVDAQNSRPIEDLF 107
Cdd:pfam14771   1 VMSDNDFDQLVEKLKRFSFDDDKLKLLEqALLNNYFTC--SQAAQLLKIFSFDDDRLKALKLLYPNIVDKQNYEVIIDVF 78

                          90
                  ....*....|....
gi 157818329  108 RINmSEKKRCKRVL 121
Cdd:pfam14771  79 TFS-SDKDKAREIL 91
PHA03247 PHA03247
large tegument protein UL36; Provisional
 298-827 5.12e-14

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 76.90  E-value: 5.12e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  298 PSVSAAATGAGMSAPNTPLAvfpTPQPSTPNPTVI--RTPSVPATPVTSTHSTTPAPVPSVFSGLVPLPGLSATPTPST- 374
Cdd:PHA03247 2489 PFAAGAAPDPGGGGPPDPDA---PPAPSRLAPAILpdEPVGEPVHPRMLTWIRGLEELASDDAGDPPPPLPPAAPPAAPd 2565

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  375 QAISIPRVTLASSETFASTCAPFTShslASSTAGSASNPITAPLSSVFAGLPLPFPPASHSIATPTPSVIASATGPLGVN 454
Cdd:PHA03247 2566 RSVPPPRPAPRPSEPAVTSRARRPD---APPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHP 2642

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  455 SplLSALKGFLTSNDTHLINSSGLPSAVTSGLASLSSLPSRNSDSPA------SVTNKCYPPAAVPTAQRSSTPGLAMFP 528
Cdd:PHA03247 2643 P--PTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAarptvgSLTSLADPPPPPPTPEPAPHALVSATP 2720

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  529 GLQSPVASATSAAPTLPAQSPLVTPSSTAVPVscgssgsllhGPHAGGISSVPAAATMPVMIKSEPTSPPPSAFKGPAHP 608
Cdd:PHA03247 2721 LPPGPAAARQASPALPAAPAPPAVPAGPATPG----------GPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVAS 2790

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  609 GTPAHGTLGLSgalgrgyPTTSVPISVPTCLNPALSGLSSLSTPLAGSMSLTPHASSTPIAPVFTALPPFTSLTNSFPL- 687
Cdd:PHA03247 2791 LSESRESLPSP-------WDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVr 2863

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  688 ----PGSPSLNPAVSlTGPSTTTSAAVHPSSATVRTVLPTTN----SSPAAFPLNLSTAVPSLFAVTQGPLPTsnPSYPG 759
Cdd:PHA03247 2864 rrppSRSPAAKPAAP-ARPPVRRLARPAVSRSTESFALPPDQperpPQPQAPPPPQPQPQPPPPPQPQPPPPP--PPRPQ 2940

                         490       500       510       520       530       540       550
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 157818329  760 FPVSSAPSGAPTLPSFPGLQAPSTVAVTPLPVAAS---APSPAPVLPGFASAFSSNFNSALVAQAGLSSGL 827
Cdd:PHA03247 2941 PPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPrfrVPQPAPSREAPASSTPPLTGHSLSRVSSWASSL 3011
PHA03247 PHA03247
large tegument protein UL36; Provisional
 146-641 2.76e-09

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 61.49  E-value: 2.76e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  146 PYPKGKPSRINGIFPGTPLKKDGEEITNEGKGIAARILGPSKPPPSTYNPHKPVPYPippcRPHATIAPSAYNNAGLVPL 225
Cdd:PHA03247 2575 PRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSP----SPAANEPDPHPPPTVPPPE 2650

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  226 ANVIAPGVPPPPPYTPNPAGADNEDLSSqskPTQSQTfSTAASQLFSPHGSNPSTPAATPVPAVSPAKAVNHPSVSAAAT 305
Cdd:PHA03247 2651 RPRDDPAPGRVSRPRRARRLGRAAQASS---PPQRPR-RRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPA 2726

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  306 GAGMSAPNTPLAVFPTPQPSTP-NPTVIRTPSVPATPVTSTHSTTPAPVPSvfsglvplPGLSATPTPSTQAISIPRVTL 384
Cdd:PHA03247 2727 AARQASPALPAAPAPPAVPAGPaTPGGPARPARPPTTAGPPAPAPPAAPAA--------GPPRRLTRPAVASLSESRESL 2798

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  385 ASSETFASTCAPFTSHSLASSTAGSASNPITAPLSSVFAGLPLPFPPashsiaTPTPSVIASATGPLGVnspllsalkgf 464
Cdd:PHA03247 2799 PSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGP------PPPSLPLGGSVAPGGD----------- 2861

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  465 ltsndthlINSSGLPSAVTSGLASLSSLPSRNSDSPASVTNKCYPPAAVPTAQRSSTPGLAMFPGLQSPVASATSAAPTL 544
Cdd:PHA03247 2862 --------VRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPP 2933

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  545 PAQS-PLVTPSSTAVPVSCGSSGSLLHGPHAGGISSVPAAATMPVMIKSEPTSPPPSAFKGPAHpGTPAHGTLGLSGALG 623
Cdd:PHA03247 2934 PPPPrPQPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAPASSTPPLT-GHSLSRVSSWASSLA 3012

                         490
                  ....*....|....*...
gi 157818329  624 RGYPTTSVPISVPTCLNP 641
Cdd:PHA03247 3013 LHEETDPPPVSLKQTLWP 3030
PHA03247 PHA03247
large tegument protein UL36; Provisional
 141-753 4.62e-09

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 60.72  E-value: 4.62e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  141 TIPGNPYPKGKPSRinGIFPGTPLKKDGEEITNEGKGIAARILGPSKP--PPSTYNPHKPVPYPIPPCRPHATIAPSAYN 218
Cdd:PHA03247 2458 TILGAPFSLSLLLG--ELFPGAPVYRRPAEARFPFAAGAAPDPGGGGPpdPDAPPAPSRLAPAILPDEPVGEPVHPRMLT 2535

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  219 -NAGLVPLANVIAPGVPPPPPYTPNPAGADNEDLSSQSKPTQSQTFSTAASQLFS-------------PHGSNPSTPAAT 284
Cdd:PHA03247 2536 wIRGLEELASDDAGDPPPPLPPAAPPAAPDRSVPPPRPAPRPSEPAVTSRARRPDappqsarprapvdDRGDPRGPAPPS 2615

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  285 PVPAVSPAKAVNHPSVSAAATGAGMSAP-NTPLAVFPTPQPSTPN---PTVIRTPSVPATPVTSTHSTTPAPVPSVFSGL 360
Cdd:PHA03247 2616 PLPPDTHAPDPPPPSPSPAANEPDPHPPpTVPPPERPRDDPAPGRvsrPRRARRLGRAAQASSPPQRPRRRAARPTVGSL 2695

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  361 V-------PLPGLSATPTPSTQAISIPRVTLASSETF-ASTCAPFTSHSLASSTAGSASNPITAPLSSvfAGLPLPFPPA 432
Cdd:PHA03247 2696 TsladpppPPPTPEPAPHALVSATPLPPGPAAARQASpALPAAPAPPAVPAGPATPGGPARPARPPTT--AGPPAPAPPA 2773

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  433 ShSIATPTPSVIASATGPLGVNSPLLSALKgfltSNDTHLINSSGLPSAVTSGLASLSSLPSRNSDSPASvtnkcyPPAA 512
Cdd:PHA03247 2774 A-PAAGPPRRLTRPAVASLSESRESLPSPW----DPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTA------PPPP 2842

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  513 VPTAQRSSTPGLAMFPGLQSPVASATSAAPTLPAQSPLVTPSSTAVPVSCGSSGSLLHGPHAGGISSVPAA-------AT 585
Cdd:PHA03247 2843 PGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAppppqpqPQ 2922

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  586 MPVMIKSEPTSPPPSAFKGPAHPGTPAHGTLGLSGALGRGYPTTSVPISVPTCLNPALSGLSSLSTPLAGSMSLTPHASS 665
Cdd:PHA03247 2923 PPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAPASSTPPLTGHSLS 3002

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  666 ------TPIAPVFTALPPFTSLTNSFPLPGSPSLNPAVSLTGPSTTTSAAVHPSSATVRTVLPTTNSSPAAFPLNLSTAV 739
Cdd:PHA03247 3003 rvsswaSSLALHEETDPPPVSLKQTLWPPDDTEDSDADSLFDSDSERSDLEALDPLPPEPHDPFAHEPDPATPEAGARES 3082

                         650
                  ....*....|....
gi 157818329  740 PSLFAvtqGPLPTS 753
Cdd:PHA03247 3083 PSSQF---GPPPLS 3093
PHA03247 PHA03247
large tegument protein UL36; Provisional
 509-856 4.34e-08

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 57.64  E-value: 4.34e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  509 PPAAVPTAQRSSTPGLAMFPGLQSPVASATSAAPTLPAQsplvtPSSTAVPVscGSSGSllhgphaggissvPAAATMPV 588
Cdd:PHA03247 2556 PPAAPPAAPDRSVPPPRPAPRPSEPAVTSRARRPDAPPQ-----SARPRAPV--DDRGD-------------PRGPAPPS 2615

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  589 MIKSEPTSPPPSAFKGPAHPGTPahgtlglsgalgrGYPTTSVPISVPTCLNPALSGLSSLSTPlAGSMSLTPHASSTPI 668
Cdd:PHA03247 2616 PLPPDTHAPDPPPPSPSPAANEP-------------DPHPPPTVPPPERPRDDPAPGRVSRPRR-ARRLGRAAQASSPPQ 2681

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  669 APVFTALPPFTSLTNSFPLPGSPSLNPAvslTGPSTTTSAAVHPssatvrtvlPTTNSSPAAFPlnlstavpslfAVTQG 748
Cdd:PHA03247 2682 RPRRRAARPTVGSLTSLADPPPPPPTPE---PAPHALVSATPLP---------PGPAAARQASP-----------ALPAA 2738

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  749 PLPTSNPSYPGFPVSSAPSGAPTLPSFPGLQAPSTVAVTPLPVAASAPSPAPVLPGFASAFS----SNFNSALVAQAGLS 824
Cdd:PHA03247 2739 PAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSpwdpADPPAAVLAPAAAL 2818

                         330       340       350
                  ....*....|....*....|....*....|..
gi 157818329  825 SGLQAAGSSVFPGLLSLPGIPGFSQTPPQSSL 856
Cdd:PHA03247 2819 PPAASPAGPLPPPTSAQPTAPPPPPGPPPPSL 2850
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 276-695 4.14e-06

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 50.94  E-value: 4.14e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  276 SNPSTPAATPVPAVSPAKAVNHPSVSAAATGAGMSAPNTPLAVFPTPQPSTPNPTVIRTPSVPATPVTSTHSTTPAPVPS 355
Cdd:PHA03307   44 VSDSAELAAVTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPP 123

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  356 VFSGLVPLPGLSATPTPSTQAISIPRVTLASSETFASTCAPFTSHSLASSTAGSASNPITAPLSSVFAGLPLPFPPASHS 435
Cdd:PHA03307  124 ASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAAAS 203

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  436 IATPTPSVIASATGPLGVNSPLLSAlkgfltsndthlinssglpsAVTSGLASLSSLPSRNSDSPASVTNKCYPPAAVPT 515
Cdd:PHA03307  204 PRPPRRSSPISASASSPAPAPGRSA--------------------ADDAGASSSDSSSSESSGCGWGPENECPLPRPAPI 263

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  516 AQRSStPGLAMFPGLQSPVASATSAAPTLPAQSPLVTPSSTAVPvscGSSGSLLHGPHAGGISSVPAAATMPVMIKSEPT 595
Cdd:PHA03307  264 TLPTR-IWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSG---PAPSSPRASSSSSSSRESSSSSTSSSSESSRGA 339

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  596 SPPPSAfkGPAHPGTPAHGTLGLSGALGRGYPTTSVPISVPTclNPALSGLSSLSTPLAGSMSLTPHASSTPIAPVFTAL 675
Cdd:PHA03307  340 AVSPGP--SPSRSPSPSRPPPPADPSSPRKRPRPSRAPSSPA--ASAGRPTRRRARAAVAGRARRRDATGRFPAGRPRPS 415

                         410       420
                  ....*....|....*....|
gi 157818329  676 PPFTSLTNSFPLPGSPSLNP 695
Cdd:PHA03307  416 PLDAGAASGAFYARYPLLTP 435
Herpes_BLLF1 pfam05109
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ...
 438-783 7.63e-06

Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.


Pssm-ID: 282904 [Multi-domain]  Cd Length: 886  Bit Score: 49.91  E-value: 7.63e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  438 TPTPSVIASATGPLGVNSPLLSALKGFLTSNDTHLINSSGLPSAVTSGLASLSSLPSRN--SDSPASVTNKCYPPAAVPT 515
Cdd:pfam05109 414 TTTHKVIFSKAPESTTTSPTLNTTGFAAPNTTTGLPSSTHVPTNLTAPASTGPTVSTADvtSPTPAGTTSGASPVTPSPS 493

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  516 AQRSSTPGLAmfPGLQSPVASATSAAPTLPAQSPLV---TPSSTAVPVSCGSSGSLLHGPHAGGISSVPAA------ATM 586
Cdd:pfam05109 494 PRDNGTESKA--PDMTSPTSAVTTPTPNATSPTPAVttpTPNATSPTLGKTSPTSAVTTPTPNATSPTPAVttptpnATI 571

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  587 PVMIKSEPTS----PPPSAFKGPAHPGTPAHGTLGLSGALGRGYPTTSVPISVPTclNPALSGLSSLSTPLAGSMSLTPH 662
Cdd:pfam05109 572 PTLGKTSPTSavttPTPNATSPTVGETSPQANTTNHTLGGTSSTPVVTSPPKNAT--SAVTTGQHNITSSSTSSMSLRPS 649

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  663 ASSTPIAPVFTalppfTSLTNSFPLPGS--PSLNPAVSLTGPSTTTSAAVHPSSATVRtvlpTTNSSPAAFPLNLSTAV- 739
Cdd:pfam05109 650 SISETLSPSTS-----DNSTSHMPLLTSahPTGGENITQVTPASTSTHHVSTSSPAPR----PGTTSQASGPGNSSTSTk 720

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....
gi 157818329  740 PSLFAVTQGPlPTSNPSYPGFPvSSAPSGAPTLPSFPGLQAPST 783
Cdd:pfam05109 721 PGEVNVTKGT-PPKNATSPQAP-SGQKTAVPTVTSTGGKANSTT 762
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
275-549 2.28e-05

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 48.31  E-value: 2.28e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329 275 GSNPSTPAATPVPAVSPAKAVNHPSVSAAATGAGMSAPNTPLAVFPTPQPSTP-NPTVIRTPSVPATPVTSTHSTT---- 349
Cdd:PRK07003 365 GGAPGGGVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAaAATRAEAPPAAPAPPATADRGDdaad 444

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329 350 -PAPVPSVFSGLVPLPGLSATPTPSTQAISIPRVTLASSETFASTCAPFTSHSLASSTAGSASNPITAPLSSVFAGLPLP 428
Cdd:PRK07003 445 gDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAASREDAPAA 524

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329 429 FPPASHSIATPTPSVIASATGPLGVNSPLlsalkgfltsndtHLINSSGLpsAVTSGLASLSSLPSRNSDSPASVTNKCY 508
Cdd:PRK07003 525 AAPPAPEARPPTPAAAAPAARAGGAAAAL-------------DVLRNAGM--RVSSDRGARAAAAAKPAAAPAAAPKPAA 589

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|.
gi 157818329 509 PPAAVPTaqrsSTPGLAMFPGLQSPVASATSAAPTLPAQSP 549
Cdd:PRK07003 590 PRVAVQV----PTPRARAATGDAPPNGAARAEQAAESRGAP 626
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 237-601 5.98e-05

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 47.09  E-value: 5.98e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  237 PPYTPNPAGADNEDLSSQSKPTQSQTFSTAASQLfSPHGSNPSTPAATPVPAVSPAKAVNHPSVSAAATGAGMSAPNTPL 316
Cdd:PHA03307   74 GPGTEAPANESRSTPTWSLSTLAPASPAREGSPT-PPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASP 152

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  317 AVFPTPQPSTPNPTVIRTPSVPATPVTSTHSTTPAPVPSVFSGLVPLPGLSATPTPSTQAISIPRVTLASS--ETFASTC 394
Cdd:PHA03307  153 PAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPApgRSAADDA 232

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  395 APFTSHSLASSTAGSASNPITAPLSSVFAGLPLPFPPASHSIATPTPSVIASATGPLGVNSPLLSALKGfltsndthlIN 474
Cdd:PHA03307  233 GASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPS---------SP 303

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  475 SSGLPSAVTSGLASLSSLPSRNSDSPASVTNKCYPPAAVPTAQRSSTPGLAMFPGLQSPVASATSAAPTLPAQSPLVTPS 554
Cdd:PHA03307  304 GSGPAPSSPRASSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSSPAASAG 383

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*..
gi 157818329  555 STAVPVSCGSSGSLLHGPHAGGisSVPAAATMPVMIKSEPTSPPPSA 601
Cdd:PHA03307  384 RPTRRRARAAVAGRARRRDATG--RFPAGRPRPSPLDAGAASGAFYA 428
DUF5585 pfam17823
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
 264-559 1.34e-04

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.


Pssm-ID: 465521 [Multi-domain]  Cd Length: 506  Bit Score: 45.72  E-value: 1.34e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  264 STAASQLFSPHGSNPSTPAATPVPAVSPAKAVNHPSVSAAATGAGMSAPNT----PLAVFPTPQPSTPNPTVIRTPSVPA 339
Cdd:pfam17823  83 STEVTAEHTPHGTDLSEPATREGAADGAASRALAAAASSSPSSAAQSLPAAiaalPSEAFSAPRAAACRANASAAPRAAI 162

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  340 TPVTSTHSTTPAPVPSVFSGLVPLPGLSATPTPSTQAISIPRVTLASSETfaSTCAPFTSHSLASSTAGSASNPITAPLS 419
Cdd:pfam17823 163 AAASAPHAASPAPRTAASSTTAASSTTAASSAPTTAASSAPATLTPARGI--STAATATGHPAAGTALAAVGNSSPAAGT 240

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  420 SVFAGLPLpfPPASHSIATPTPSVIASATGPLGVNSPLLSAlkgfLTSNDTHLINSSGLPSAVTSGLASLSSLPSRNSDS 499
Cdd:pfam17823 241 VTAAVGTV--TPAALATLAAAAGTVASAAGTINMGDPHARR----LSPAKHMPSDTMARNPAAPMGAQAQGPIIQVSTDQ 314

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  500 PASVTNKCYPPAAVPTAQRSSTPglAMFPGLQSPVASATSAAPTLPAQSPLVTPSSTAVP 559
Cdd:pfam17823 315 PVHNTAGEPTPSPSNTTLEPNTP--KSVASTNLAVVTTTKAQAKEPSASPVPVLHTSMIP 372
Herpes_BLLF1 pfam05109
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ...
 257-738 2.56e-04

Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.


Pssm-ID: 282904 [Multi-domain]  Cd Length: 886  Bit Score: 44.91  E-value: 2.56e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  257 PTQSQTFSTAASQLFSPHGSNPSTPAATPVPAVSPAKAVNHPSVSAAATGAGMSAPNTPLAVFPTPQPST-PNPTVIRTP 335
Cdd:pfam05109 425 PESTTTSPTLNTTGFAAPNTTTGLPSSTHVPTNLTAPASTGPTVSTADVTSPTPAGTTSGASPVTPSPSPrDNGTESKAP 504

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  336 SV--PATPVTSTHSTTPAPVPSVfsglvplpglsATPTPStqaisiprvtlASSETFASTcAPFTSHSLASSTAGSASNP 413
Cdd:pfam05109 505 DMtsPTSAVTTPTPNATSPTPAV-----------TTPTPN-----------ATSPTLGKT-SPTSAVTTPTPNATSPTPA 561

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  414 ITAPLSSVFAGLPLPFPPAShSIATPTPSVIASATGPLGVNSPLLSALKGFLTSNDTHLINSSGLPSAVTSGLASLSSlp 493
Cdd:pfam05109 562 VTTPTPNATIPTLGKTSPTS-AVTTPTPNATSPTVGETSPQANTTNHTLGGTSSTPVVTSPPKNATSAVTTGQHNITS-- 638

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  494 srNSDSPASVTNKCYPPAAVPTAQRSSTPGLAMFpglqspvasaTSAAPTLPAQSPLVTPSSTAV-------PVSCGSSG 566
Cdd:pfam05109 639 --SSTSSMSLRPSSISETLSPSTSDNSTSHMPLL----------TSAHPTGGENITQVTPASTSThhvstssPAPRPGTT 706

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  567 SLLHGPHAGGISSVPAAATM----PVMIKSEPTSPP--PSAFKGPAHPGTPAHGTLGLSGALGRGYPTTSVPISvptcln 640
Cdd:pfam05109 707 SQASGPGNSSTSTKPGEVNVtkgtPPKNATSPQAPSgqKTAVPTVTSTGGKANSTTGGKHTTGHGARTSTEPTT------ 780

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  641 pALSGLSSLSTPLAGSMSLTPHASSTPIAPVFT-ALPPFTSLTNSFPLPgsPSLNPAVsltgpSTTTSAAVHPSSATVRT 719
Cdd:pfam05109 781 -DYGGDSTTPRTRYNATTYLPPSTSSKLRPRWTfTSPPVTTAQATVPVP--PTSQPRF-----SNLSMLVLQWASLAVLT 852

                         490
                  ....*....|....*....
gi 157818329  720 VLPTTNSSPAAFPLNLSTA 738
Cdd:pfam05109 853 LLLLLVMADCAFRRNLSTS 871
Chi1 COG3469
Chitinase [Carbohydrate transport and metabolism];
257-465 4.95e-04

Chitinase [Carbohydrate transport and metabolism];


Pssm-ID: 442692 [Multi-domain]  Cd Length: 534  Bit Score: 43.59  E-value: 4.95e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329 257 PTQSQTFSTAASQLFSPHGSNPSTPAATPVPAVSPAKAVNHPSVSAAATGAGMSAPNTPLAVFPTPQPSTPNPTVIRTPS 336
Cdd:COG3469   16 SATAVTLLGAAATAASVTLTAATATTVVSTTGSVVVAASGSAGSGTGTTAASSTAATSSTTSTTATATAAAAAATSTSAT 95

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329 337 VPATPVTSTHSTTPAPVPSVFSGLVPLPGLSATPTPSTQAISIPRVTLASSETFASTCAPFTSHSLASSTAGSASNPITA 416
Cdd:COG3469   96 LVATSTASGANTGTSTVTTTSTGAGSVTSTTSSTAGSTTTSGASATSSAGSTTTTTTVSGTETATGGTTTTSTTTTTTSA 175

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*....
gi 157818329 417 PLSSVFAGlplPFPPASHSIATPTPSVIASATGPLGVNSPLLSALKGFL 465
Cdd:COG3469  176 STTPSATT---TATATTASGATTPSATTTATTTGPPTPGLPKHVLVGYW 221
Chi1 COG3469
Chitinase [Carbohydrate transport and metabolism];
605-803 1.19e-03

Chitinase [Carbohydrate transport and metabolism];


Pssm-ID: 442692 [Multi-domain]  Cd Length: 534  Bit Score: 42.43  E-value: 1.19e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329 605 PAHPGTPAHGTLGLSGALGRGYPTTSVPISVPTCLNPALSGLSSLSTPLAGSMSLTPHASSTPIAPVFTA---LPPFTSL 681
Cdd:COG3469    1 SSSVSTAASPTAGGASATAVTLLGAAATAASVTLTAATATTVVSTTGSVVVAASGSAGSGTGTTAASSTAatsSTTSTTA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329 682 TNSFPLPGSPSLNPAVSLTGPSTTTSAAVHPSSATVRTVLPTTNSSPAAFPLNLSTAVPSLFAVTQGPLPTSNPSYPGF- 760
Cdd:COG3469   81 TATAAAAAATSTSATLVATSTASGANTGTSTVTTTSTGAGSVTSTTSSTAGSTTTSGASATSSAGSTTTTTTVSGTETAt 160

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|...
gi 157818329 761 ------PVSSAPSGAPTLPSFPGLQAPSTVAVTPLPVAASAPS----PAPVLP 803
Cdd:COG3469  161 ggttttSTTTTTTSASTTPSATTTATATTASGATTPSATTTATttgpPTPGLP 213
PHA03378 PHA03378
EBNA-3B; Provisional
 530-865 1.93e-03

EBNA-3B; Provisional


Pssm-ID: 223065 [Multi-domain]  Cd Length: 991  Bit Score: 41.98  E-value: 1.93e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329 530 LQSPVASATSAAPTLPaQSPLVTPSSTAVpvscgssgsLLHGPHAGGISS-------------VPAAATMPVMIKSEPTS 596
Cdd:PHA03378 462 LEGPTGPLSVQAPLEP-WQPLPHPQVTPV---------ILHQPPAQGVQAhgsmldllekddeDMEQRVMATLLPPSPPQ 531

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329 597 P-----PPSAFKG-----PAHPGTPAHGTLGLSGALGRGypttsvPISVPTCLNPALSGLSSLSTPLAGSMSLTPHASST 666
Cdd:PHA03378 532 PragrrAPCVYTEdldieSDEPASTEPVHDQLLPAPGLG------PLQIQPLTSPTTSQLASSAPSYAQTPWPVPHPSQT 605

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329 667 PIAPVFTALPPFTSLTNSFPLPGSPSlnPAVSLTGPSTTTSAAVHPSSATVRTVLPTTNSSPAAFPLNLSTAvpslfavt 746
Cdd:PHA03378 606 PEPPTTQSHIPETSAPRQWPMPLRPI--PMRPLRMQPITFNVLVFPTPHQPPQVEITPYKPTWTQIGHIPYQ-------- 675

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329 747 qgplPTSNPSYPGFPVSSAPSGAPTLPSFPGLQAPSTVAVTPLPVAASAPSPAPVLPGFASAFSSNFNSALVAQAGLSSG 826
Cdd:PHA03378 676 ----PSPTGANTMLPIQWAPGTMQPPPRAPTPMRPPAAPPGRAQRPAAATGRARPPAAAPGRARPPAAAPGRARPPAAAP 751

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|..
gi 157818329 827 LQAAGSSVFPGLLSLP-GIPGFS--QTPPQSSLQELQHSAAA 865
Cdd:PHA03378 752 GRARPPAAAPGRARPPaAAPGAPtpQPPPQAPPAPQQRPRGA 793
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
271-463 2.11e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 41.79  E-value: 2.11e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329 271 FSPHGSN----PSTPAATPVPAVSPAKAVNHPSVSAAATGAGMSAPNTPLAVFPTPQPSTPN------------------ 328
Cdd:PRK12323 363 FRPGQSGggagPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPArrspapealaaarqasar 442

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329 329 ---PTVIRTPSVPATPVTSTHSTTPAPVPSVFSGLVPLPGLSATPTPSTQAISIPRVTLASSEtFASTCAPFTSHSLASS 405
Cdd:PRK12323 443 gpgGAPAPAPAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPE-FASPAPAQPDAAPAGW 521

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 157818329 406 TAGSASNPITAPLSSVFAGLPLPFPPASHSIATPTPSVIASATGPLGVNSPLLSALKG 463
Cdd:PRK12323 522 VAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRASASGLPDMFDG 579
Herpes_BLLF1 pfam05109
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ...
 253-576 2.54e-03

Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.


Pssm-ID: 282904 [Multi-domain]  Cd Length: 886  Bit Score: 41.83  E-value: 2.54e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  253 SQSKPTQSQTFSTAASQLFSPHGSNPSTPAATPVPAVSPAKAVNHPSVSAAATGAGMSApNTPLAVFPTPQPSTPNPTVI 332
Cdd:pfam05109 462 ASTGPTVSTADVTSPTPAGTTSGASPVTPSPSPRDNGTESKAPDMTSPTSAVTTPTPNA-TSPTPAVTTPTPNATSPTLG 540

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  333 RTPSVPATPVTSTHSTTPAPVPSVFSGLVPLPGLSATPTPSTQAISIPRVTlASSETFASTCAPFTSHSLasstAGSASN 412
Cdd:pfam05109 541 KTSPTSAVTTPTPNATSPTPAVTTPTPNATIPTLGKTSPTSAVTTPTPNAT-SPTVGETSPQANTTNHTL----GGTSST 615

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  413 PITAPlssvfaglplPFPPASHSIATPTPSVIASATGPLGVNSPLLSALKGFLTSNDTHLINSSGLPSAVTSGLASLSSL 492
Cdd:pfam05109 616 PVVTS----------PPKNATSAVTTGQHNITSSSTSSMSLRPSSISETLSPSTSDNSTSHMPLLTSAHPTGGENITQVT 685

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  493 PSRNSDSPASVTNKCYPPAAVPTAQRSSTPGLAMFPG---LQSPVASATSAAPTLPAQSPLVTPSSTAvpvSCGSSGSLL 569
Cdd:pfam05109 686 PASTSTHHVSTSSPAPRPGTTSQASGPGNSSTSTKPGevnVTKGTPPKNATSPQAPSGQKTAVPTVTS---TGGKANSTT 762


                  ....*..
gi 157818329  570 HGPHAGG 576
Cdd:pfam05109 763 GGKHTTG 769
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
533-773 2.58e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 41.40  E-value: 2.58e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329 533 PVASATSAAPTLPAQSPLVTPSSTAVPvscgssgsllhgPHAGGISSVPAAATMPVMIKSEPTSPPPSAFKGPAHPGTPA 612
Cdd:PRK12323 365 PGQSGGGAGPATAAAAPVAQPAPAAAA------------PAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEA 432

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329 613 HGTLGLSGALGRGY----PTTSVPISVPTCLNPALSglsSLSTPLAGSMSLTPHASSTPIAPVFTALPPFTSLTNSFPLP 688
Cdd:PRK12323 433 LAAARQASARGPGGapapAPAPAAAPAAAARPAAAG---PRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASP 509

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329 689 GSPSLNPAVSLTGPSTTTSAAVHPSSATVRTVLPTTNSSPAAFPlnlstAVPSLFAVTQGPLPTSNPSYPGFPVSSAPSG 768
Cdd:PRK12323 510 APAQPDAAPAGWVAESIPDPATADPDDAFETLAPAPAAAPAPRA-----AAATEPVVAPRPPRASASGLPDMFDGDWPAL 584


                 ....*
gi 157818329 769 APTLP 773
Cdd:PRK12323 585 AARLP 589
PRK14971 PRK14971
DNA polymerase III subunit gamma/tau;
275-420 3.44e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237874 [Multi-domain]  Cd Length: 614  Bit Score: 40.91  E-value: 3.44e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329 275 GSNPSTPAATPVPAVSPAKAVNHPSVSAAATGAgmsapntPLAVFPTPQPSTPNPtviRTPSVPATPVTSTHSTTPAPVP 354
Cdd:PRK14971 369 ASGGRGPKQHIKPVFTQPAAAPQPSAAAAASPS-------PSQSSAAAQPSAPQS---ATQPAGTPPTVSVDPPAAVPVN 438

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 157818329 355 SVfsglvplpglSATPTPSTQAISIPRVTLASSETfaSTCAPFTSHSLASSTAGSASNPITAPLSS 420
Cdd:PRK14971 439 PP----------STAPQAVRPAQFKEEKKIPVSKV--SSLGPSTLRPIQEKAEQATGNIKEAPTGT 492
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 491-852 4.98e-03

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 40.92  E-value: 4.98e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  491 SLPSRNSDSPASVTNKCYPPAAVPTAQRSSTPGLAMFPGLQsPVASATSAAPTLPAQSPLVTPSSTAVPVSCGSSGSLLH 570
Cdd:PHA03307   99 SPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLR-PVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLS 177

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  571 GPHAGGISSVPAAATMPVMIKSEPTSPPPSAFKGPAHPGTPAHGTLGL-SGALGRGYPTTSVPISVPTCLNPALSGLSSL 649
Cdd:PHA03307  178 SPEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGrSAADDAGASSSDSSSSESSGCGWGPENECPL 257

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  650 STPlagSMSLTPHASSTPIAPVFTALPPFTSLTNSFPLPGSPSLNPAVSLTGPSTTTSAAVHPSSATVRTVLPTTNSSPA 729
Cdd:PHA03307  258 PRP---APITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSE 334

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  730 AfplnlstavpslfavtqgplptsnPSYPGFPVSSAPSGAPTLPSfpglqaPSTVAVTPLPVAASAPSPApvlPGFASAF 809
Cdd:PHA03307  335 S------------------------SRGAAVSPGPSPSRSPSPSR------PPPPADPSSPRKRPRPSRA---PSSPAAS 381

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|...
gi 157818329  810 SSNFNSALVAQAGLSSGLQAAGSSVFPGLLSLPGIPGFSQTPP 852
Cdd:PHA03307  382 AGRPTRRRARAAVAGRARRRDATGRFPAGRPRPSPLDAGAASG 424
Chi1 COG3469
Chitinase [Carbohydrate transport and metabolism];
265-485 5.37e-03

Chitinase [Carbohydrate transport and metabolism];


Pssm-ID: 442692 [Multi-domain]  Cd Length: 534  Bit Score: 40.51  E-value: 5.37e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329 265 TAASQLFSPHGSNPSTPAATPVPAVSPAKAVNH--PSVSAAATGAGMSAPNTPLAVFPTPQPSTPNPTVIRTPSVPATPV 342
Cdd:COG3469   12 AGGASATAVTLLGAAATAASVTLTAATATTVVSttGSVVVAASGSAGSGTGTTAASSTAATSSTTSTTATATAAAAAATS 91

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329 343 TSTHSTTPAPvpsvfsglvPLPGLSATPTPSTQAISIPRVTLASSETFASTCAPFTSHSLASSTAGSASNPITAPLSSVF 422
Cdd:COG3469   92 TSATLVATST---------ASGANTGTSTVTTTSTGAGSVTSTTSSTAGSTTTSGASATSSAGSTTTTTTVSGTETATGG 162

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 157818329 423 AGLPLPFPPASHSIATPTPSVIASATGPLGVNSPLLSalkgflTSNDTHLINSSGLPSAVTSG 485
Cdd:COG3469  163 TTTTSTTTTTTSASTTPSATTTATATTASGATTPSAT------TTATTTGPPTPGLPKHVLVG 219
Chi1 COG3469
Chitinase [Carbohydrate transport and metabolism];
431-644 5.51e-03

Chitinase [Carbohydrate transport and metabolism];


Pssm-ID: 442692 [Multi-domain]  Cd Length: 534  Bit Score: 40.51  E-value: 5.51e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329 431 PASHSIATPTPSVIASATGPLGVNSPLLSALKGFLTSNDTHLINSSGLPSAVTSGLASLSSLPSRNSDSPASVTNKCYPP 510
Cdd:COG3469    5 STAASPTAGGASATAVTLLGAAATAASVTLTAATATTVVSTTGSVVVAASGSAGSGTGTTAASSTAATSSTTSTTATATA 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329 511 AAVPTAQRSSTPGLAMFPGLQSPVASATSAAPTLPAQSPLVTPSSTAVPVSCGSSGSLLHGPHAGGISSVPAAATMPVMI 590
Cdd:COG3469   85 AAAAATSTSATLVATSTASGANTGTSTVTTTSTGAGSVTSTTSSTAGSTTTSGASATSSAGSTTTTTTVSGTETATGGTT 164

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....
gi 157818329 591 KSEPTSPPPSAFKGPAHPGTPAHGTlglsgALGRGYPTTSVPISVPTCLNPALS 644
Cdd:COG3469  165 TTSTTTTTTSASTTPSATTTATATT-----ASGATTPSATTTATTTGPPTPGLP 213
PPE COG5651
PPE-repeat protein [Function unknown];
592-811 5.85e-03

PPE-repeat protein [Function unknown];


Pssm-ID: 444372 [Multi-domain]  Cd Length: 385  Bit Score: 39.88  E-value: 5.85e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329 592 SEPTSPPPSAFKGPAHPGTPAHGTLGLSGALGRGYPTTSVPISVPTCLNPALSGLSSLSTPLAGSMSLTPHASSTPIAPV 671
Cdd:COG5651  165 TPFTQPPPTITNPGGLLGAQNAGSGNTSSNPGFANLGLTGLNQVGIGGLNSGSGPIGLNSGPGNTGFAGTGAAAGAAAAA 244

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329 672 FTALPPFTSLTNSFPLPGSPSLNPAVSLTGPSTT-TSAAVHPSSATVRTVLPTTNSSPAAFPLNLSTAVPSLFAVTQGPL 750
Cdd:COG5651  245 AAAAAAAGAGASAALASLAATLLNASSLGLAATAaSSAATNLGLAGSPLGLAGGGAGAAAATGLGLGAGGAAGAAGATGA 324

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 157818329 751 PTSNPSYPGFPVSSAPSGAPTLPSFPGLQAPSTVAVTPLPVAASAPSPAPVLPGFASAFSS 811
Cdd:COG5651  325 GAALGAGAAAAAAGAAAGAGAAAAAAAGGAGGGGGGALGAGGGGGSAGAAAGAASGGGAAA 385
PLN02217 PLN02217
probable pectinesterase/pectinesterase inhibitor
 523-651 6.23e-03

probable pectinesterase/pectinesterase inhibitor


Pssm-ID: 215130 [Multi-domain]  Cd Length: 670  Bit Score: 40.46  E-value: 6.23e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329 523 GLAMFPGLQSPVASATSAAPTLPAQSPLVTPSSTAVPVSCGSSGSllhgPHAGGISSVPAAatmPVMIKSEPTSPPPSAF 602
Cdd:PLN02217 554 GVPYIPGLFAGNPGSTNSTPTGSAASSNTTFSSDSPSTVVAPSTS----PPAGHLGSPPAT---PSKIVSPSTSPPASHL 626

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*....
gi 157818329 603 KGPahPGTPAHGTlglSGALGRGYPTTSVPISVPTCLNPALSGLSSLST 651
Cdd:PLN02217 627 GSP--STTPSSPE---SSIKVASTETASPESSIKVASTESSVSMVSMST 670
PRK10263 PRK10263
DNA translocase FtsK; Provisional
 184-336 7.26e-03

DNA translocase FtsK; Provisional


Pssm-ID: 236669 [Multi-domain]  Cd Length: 1355  Bit Score: 40.45  E-value: 7.26e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  184 GPSKPPPSTYNPHKPVPYPIPPCRPHatIAPSAYNNAGLVPLANVIAPGVPPPPP-----YTPNPAGADNEDLSSQSKPT 258
Cdd:PRK10263  453 QSTFAPQSTYQTEQTYQQPAAQEPLY--QQPQPVEQQPVVEPEPVVEETKPARPPlyyfeEVEEKRAREREQLAAWYQPI 530

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157818329  259 QSQTFSTAASQLFSPHGSNPSTPAATPVPAVSPAKAVNHPSVSAAATGAGMSAPNTPLAV--FPTPQ------PSTPNPT 330
Cdd:PRK10263  531 PEPVKEPEPIKSSLKAPSVAAVPPVEAAAAVSPLASGVKKATLATGAAATVAAPVFSLANsgGPRPQvkegigPQLPRPK 610


                  ....*.
gi 157818329  331 VIRTPS 336
Cdd:PRK10263  611 RIRVPT 616
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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