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Conserved domains on  [gi|403225013|ref|NP_001101145|]
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mastermind-like protein 3 [Rattus norvegicus]

Protein Classification

MamL-1 domain-containing protein( domain architecture ID 10560254)

MamL-1 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
MamL-1 pfam09596
MamL-1 domain; The MamL-1 domain is a polypeptide of up to 70 residues, numbers 15-67 of which ...
 67-124 9.01e-22

MamL-1 domain; The MamL-1 domain is a polypeptide of up to 70 residues, numbers 15-67 of which adopt an elongated kinked helix that wraps around ANK and CSL forming one of the complexes in the build-up of the Notch transcriptional complex for recruiting general transcription factors..


:

Pssm-ID: 462834  Cd Length: 58  Bit Score: 89.68  E-value: 9.01e-22
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 403225013    67 PKHSTVVERLRQRIEGCRRHHVNCENRYQQAQVEQLELERRDTVSLYQRTLEQRAKKS 124
Cdd:pfam09596    1 PKHQAVVDRLRRRIELYRRHHNDCESRYDNTQAERCEQERQETLMLHQRVLDSKAKRT 58
PRK13042 super family cl32851
superantigen-like protein SSL4; Reviewed;
355-432 1.03e-04

superantigen-like protein SSL4; Reviewed;


The actual alignment was detected with superfamily member PRK13042:

Pssm-ID: 183854 [Multi-domain]  Cd Length: 291  Bit Score: 45.78  E-value: 1.03e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 403225013  355 SVKSDASHSPFAHVSLGSPQARPSSSGPPFSTVSTGTSLPSvantpvapnpASSPANCAVQSPQTPTQAHTPGQAPPR 432
Cdd:PRK13042   35 STKVEAPQSTPPSTKVEAPQSKPNATTPPSTKVEAPQQTPN----------ATTPSSTKVETPQSPTTKQVPTEINPK 102
 
Name Accession Description Interval E-value
MamL-1 pfam09596
MamL-1 domain; The MamL-1 domain is a polypeptide of up to 70 residues, numbers 15-67 of which ...
 67-124 9.01e-22

MamL-1 domain; The MamL-1 domain is a polypeptide of up to 70 residues, numbers 15-67 of which adopt an elongated kinked helix that wraps around ANK and CSL forming one of the complexes in the build-up of the Notch transcriptional complex for recruiting general transcription factors..


Pssm-ID: 462834  Cd Length: 58  Bit Score: 89.68  E-value: 9.01e-22
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 403225013    67 PKHSTVVERLRQRIEGCRRHHVNCENRYQQAQVEQLELERRDTVSLYQRTLEQRAKKS 124
Cdd:pfam09596    1 PKHQAVVDRLRRRIELYRRHHNDCESRYDNTQAERCEQERQETLMLHQRVLDSKAKRT 58
PRK13042 PRK13042
superantigen-like protein SSL4; Reviewed;
355-432 1.03e-04

superantigen-like protein SSL4; Reviewed;


Pssm-ID: 183854 [Multi-domain]  Cd Length: 291  Bit Score: 45.78  E-value: 1.03e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 403225013  355 SVKSDASHSPFAHVSLGSPQARPSSSGPPFSTVSTGTSLPSvantpvapnpASSPANCAVQSPQTPTQAHTPGQAPPR 432
Cdd:PRK13042   35 STKVEAPQSTPPSTKVEAPQSKPNATTPPSTKVEAPQQTPN----------ATTPSSTKVETPQSPTTKQVPTEINPK 102
 
Name Accession Description Interval E-value
MamL-1 pfam09596
MamL-1 domain; The MamL-1 domain is a polypeptide of up to 70 residues, numbers 15-67 of which ...
 67-124 9.01e-22

MamL-1 domain; The MamL-1 domain is a polypeptide of up to 70 residues, numbers 15-67 of which adopt an elongated kinked helix that wraps around ANK and CSL forming one of the complexes in the build-up of the Notch transcriptional complex for recruiting general transcription factors..


Pssm-ID: 462834  Cd Length: 58  Bit Score: 89.68  E-value: 9.01e-22
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 403225013    67 PKHSTVVERLRQRIEGCRRHHVNCENRYQQAQVEQLELERRDTVSLYQRTLEQRAKKS 124
Cdd:pfam09596    1 PKHQAVVDRLRRRIELYRRHHNDCESRYDNTQAERCEQERQETLMLHQRVLDSKAKRT 58
PRK13042 PRK13042
superantigen-like protein SSL4; Reviewed;
355-432 1.03e-04

superantigen-like protein SSL4; Reviewed;


Pssm-ID: 183854 [Multi-domain]  Cd Length: 291  Bit Score: 45.78  E-value: 1.03e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 403225013  355 SVKSDASHSPFAHVSLGSPQARPSSSGPPFSTVSTGTSLPSvantpvapnpASSPANCAVQSPQTPTQAHTPGQAPPR 432
Cdd:PRK13042   35 STKVEAPQSTPPSTKVEAPQSKPNATTPPSTKVEAPQQTPN----------ATTPSSTKVETPQSPTTKQVPTEINPK 102
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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