|
Name |
Accession |
Description |
Interval |
E-value |
| YobN |
COG1231 |
Monoamine oxidase [Amino acid transport and metabolism]; |
51-504 |
4.32e-120 |
|
Monoamine oxidase [Amino acid transport and metabolism];
Pssm-ID: 440844 [Multi-domain] Cd Length: 440 Bit Score: 360.01 E-value: 4.32e-120
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 51 LHTSPSSKRIVVVGAGMAGLVAAKLLQDAGHEVTILEASNHIGGRVVTLRNKEEGWHFELGPMRIPESHRIIHTYIQKFG 130
Cdd:COG1231 1 MSRRARGKDVVIVGAGLAGLAAARELRKAGLDVTVLEARDRVGGRVWTLRFGDDGLYAELGAMRIPPSHTNLLALARELG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 131 LKLNNFTQHDNNTWYLLRGHRYRASEVKANPEILGyplrpseknkTAEDLFYQAITKvKASNCSQLLSLYDSYSTKAYLL 210
Cdd:COG1231 81 LPLEPFPNENGNALLYLGGKRVRAGEIAADLRGVA----------ELLAKLLRALAA-ALDPWAHPAAELDRESLAEWLR 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 211 KEGmLSRGAVEMIGDMMNEN--AGFYR-SLLESLRIANIFTKNDQFTEITGGFDQLPNSLNDSLkPGTIHLGSKVERVVG 287
Cdd:COG1231 150 RNG-ASPSARRLLGLLGAGEygADPDElSLLDLLRYAASAGGGAQQFRIVGGMDQLPRALAAEL-GDRIRLGAPVTRIRQ 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 288 NESKVEVLYRTDGptsalyNLTADYVIISASAKATRLIAFQPPLSPEKIRALRSVHYNSATKVIFVCNERFWEKDGIHGG 367
Cdd:COG1231 228 DGDGVTVTTDDGG------TVRADAVIVTVPPSVLRRIEFDPPLPAAKRAAIQRLPYGAAIKVFLQFDRPFWEEDGLYGG 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 368 YSITDRPSRFIYYPSYSRPSSKGILLaSFTMDDDSFFFTALKPNQVVDIILDDLAAVHLIPKEELKRmcpkSEVKHWSLD 447
Cdd:COG1231 302 ISLTDLPIRQTWYPSNGPDGGAGVLL-GYVGGDDARALAALSPEERVAAALEQLARIFGVYAAEPVD----YVSTDWGRD 376
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 157817668 448 PFTIGSYAEFTPYQFLDDLKQLSQTEGRIYFAGEHTSLP-HAWIETAIKSGIRAAKNI 504
Cdd:COG1231 377 PWSRGAYAAAPPGQLTAAGPALAEPDGRIHFAGEHTSDEwPGWVEGALESGERAAAEI 434
|
|
| Amino_oxidase |
pfam01593 |
Flavin containing amine oxidoreductase; This family consists of various amine oxidases, ... |
67-504 |
1.05e-80 |
|
Flavin containing amine oxidoreductase; This family consists of various amine oxidases, including maze polyamine oxidase (PAO)and various flavin containing monoamine oxidases (MAO). The aligned region includes the flavin binding site of these enzymes. The family also contains phytoene dehydrogenases and related enzymes. In vertebrates MAO plays an important role regulating the intracellular levels of amines via there oxidation; these include various neurotransmitters, neurotoxins and trace amines. In lower eukaryotes such as aspergillus and in bacteria the main role of amine oxidases is to provide a source of ammonium. PAOs in plants, bacteria and protozoa oxidase spermidine and spermine to an aminobutyral, diaminopropane and hydrogen peroxide and are involved in the catabolism of polyamines. Other members of this family include tryptophan 2-monooxygenase, putrescine oxidase, corticosteroid binding proteins and antibacterial glycoproteins.
Pssm-ID: 396255 [Multi-domain] Cd Length: 446 Bit Score: 258.58 E-value: 1.05e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 67 MAGLVAAKLLQDAGHEVTILEASNHIGGRVVTLRnkEEGWHFELGPMRIPESHRIIHTYIQKFGLK----LNNFTQHDNN 142
Cdd:pfam01593 1 LAGLAAARELLRAGHDVTVLEARDRVGGRIRTVR--DDGFLIELGAMWFHGAQPPLLALLKELGLEdrlvLPDPAPFYTV 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 143 TWYLLRGHRYRASEVKANPEIL---GYPLRPSEKNKTAEDLFYQAITKVKAsncsqllslYDSYSTKAYLLKEGMLSRGA 219
Cdd:pfam01593 79 LFAGGRRYPGDFRRVPAGWEGLlefGRLLSIPEKLRLGLAALASDALDEFD---------LDDFSLAESLLFLGRRGPGD 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 220 VEMIGDMMNENA--------GFYRSLLESLRIANIFTKNDQFTE-------ITGGFDQLPNSLNDSLKPGTIHLGSKVER 284
Cdd:pfam01593 150 VEVWDRLIDPELfaalpfasGAFAGDPSELSAGLALPLLWALLGeggslllPRGGLGALPDALAAQLLGGDVRLNTRVRS 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 285 VVGNESKVEVLYrTDGPTsalynLTADYVIISASAKATRLIAFQPPLSPEKIRALRSVHYNSATKVIFVCNERFWEKDGI 364
Cdd:pfam01593 230 IDREGDGVTVTL-TDGEV-----IEADAVIVTVPLGVLKRILFTPPLPPEKARAIRNLGYGPVNKVHLEFDRKFWPDLGL 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 365 HG--GYSITDRPSRFIYYPSYSR-PSSKGILLASFTMDDDSF-FFTALKPNQVVDIILDDLAAVHLIPKEELKRMCpkse 440
Cdd:pfam01593 304 LGllSELLTGLGTAFSWLTFPNRaPPGKGLLLLVYVGPGDRArELEGLSDEELLQAVLRDLRKLFGEEAPEPLRVL---- 379
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 157817668 441 VKHWSLDPFTIGSYAEFTPYQFLDDLKQLSQT-EGRIYFAGEHTSLPH-AWIETAIKSGIRAAKNI 504
Cdd:pfam01593 380 VSDWHTDPWPRGSYSLPQYGPGHDDYRPLARTpDPGLFFAGEHTSTGYpGTVEGAIESGRRAARAV 445
|
|
| HemY |
COG1232 |
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen ... |
57-508 |
4.32e-31 |
|
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen oxidase HemY/PPOX is part of the Pathway/BioSystem: Heme biosynthesis
Pssm-ID: 440845 [Multi-domain] Cd Length: 443 Bit Score: 125.33 E-value: 4.32e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 57 SKRIVVVGAGMAGLVAAKLLQDAGHEVTILEASNHIGGRVVTLRnkEEGWHFELGPMRIPESHRIIHTYIQKFGLKlNNF 136
Cdd:COG1232 1 MKRVAVIGGGIAGLTAAYRLAKAGHEVTVLEASDRVGGLIRTVE--VDGFRIDRGPHSFLTRDPEVLELLRELGLG-DEL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 137 TQHDN-NTWYLLRGHRYRASevKANPEILGYPL-----------------RPSEKNKTAEDLFYQA-------------I 185
Cdd:COG1232 78 VWPNTrKSYIYYGGKLHPLP--QGPLALLRSPLlslagklrallellaprRPPGEDESLAEFVRRRfgrevyerlveplL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 186 TKVKASNCSQLlslydsySTKAyllkegmlsrgAVEMIGDMMNEnagfYRSLLES-LRIANIFTKNDQFTEITGGFDQLP 264
Cdd:COG1232 156 EGVYAGDPDEL-------SADW-----------AFPRLKRLELE----HGSLIKGaLALRKGAKAGEVFGYLRGGLGTLV 213
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 265 NSLNDSLKPGTIHLGSKVERVVGNESKVEVLYRtDGPTsalynLTADYVIISASAKAT-RLIafqPPLSPEKIRALRSVH 343
Cdd:COG1232 214 EALAEALEAGEIRLGTRVTAIEREGGGWRVTTS-DGET-----IEADAVVSATPAPALaRLL---APLPPEVAAALAGIP 284
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 344 YNSATKVIFVCNERFWeKDGIHGGYSITDRPSRFIY---YPS----YSRPSSKGILLAS-FTMDDDSFFftALKPNQVVD 415
Cdd:COG1232 285 YASVAVVALGFDRPDL-PPPDGFGWLVPRDEGVPILavtFSSnkwpHRAPDGKVLLRLEvGGAGDPELW--QLSDEELVA 361
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 416 IILDDLAAVHLIPKEELkrmcpKSEVKHWsldpftIGSYAEFTP--YQFLDDLKQLSQTEGRIYFAG---EHTSLPHawi 490
Cdd:COG1232 362 LALADLRKLLGIDAEPV-----DTRVVRW------PKAYPQYTVghLERVAAIREALAALPGLYLAGrayDGVGLPD--- 427
|
490
....*....|....*...
gi 157817668 491 etAIKSGIRAAKNIQDTV 508
Cdd:COG1232 428 --CIRSGREAAERILAEL 443
|
|
| PLN02676 |
PLN02676 |
polyamine oxidase |
42-517 |
2.58e-20 |
|
polyamine oxidase
Pssm-ID: 215362 [Multi-domain] Cd Length: 487 Bit Score: 93.63 E-value: 2.58e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 42 ALLLIAQNGLHTSPSSKRIVVVGAGMAGLVAAKLLQDAGHE-VTILEASNHIGGRVvtlrNKEE--GWHFELGPMRI--- 115
Cdd:PLN02676 11 LAVHLFAVAAMDAKPSPSVIIVGAGMSGISAAKTLSEAGIEdILILEATDRIGGRM----RKANfaGVSVELGANWVegv 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 116 --PESHRIIhTYIQKFGLK--LNNFTQHDNNTwYLLRGHRYRASEVKAnpeilgyplrpSEKNKTAEDLFYQAITKVKAS 191
Cdd:PLN02676 87 ggPESNPIW-ELANKLKLRtfYSDFDNLSSNI-YKQDGGLYPKKVVQK-----------SMKVADASDEFGENLSISLSA 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 192 NCSQLLSLYDSYSTKAYLLKEgmlsrgAVEMIGDMMN---ENAGFYR--SLLESLRIANI--FTKNDQFTEITGGFDQLP 264
Cdd:PLN02676 154 KKAVDISILTAQRLFGQVPKT------PLEMVIDYYNydyEFAEPPRvtSLKNTEPNPTFvdFGEDEYFVADPRGYESLV 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 265 NSLND---SLKPGTIH----LGSKVERVVgNESKVEVLYRT-DGPTsalYNltADYVIISASAKA--TRLIAFQPPLSPE 334
Cdd:PLN02676 228 YYLAEqflSTKSGKITdprlKLNKVVREI-SYSKNGVTVKTeDGSV---YR--AKYVIVSVSLGVlqSDLIKFKPPLPDW 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 335 KIRALRSVHYNSATKVIFVCNERFW-------------EKDGihggysitdrpsrfiYYPSYSR-----PSSKgILLASF 396
Cdd:PLN02676 302 KIEAIYQFDMAVYTKIFLKFPYKFWpsgpgtefflyahERRG---------------YYPFWQHleneyPGSN-VLFVTV 365
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 397 TmDDDSFFFTALKPNQVvdiilddLAAVHlipkEELKRM----CPKSE---VKHWSLDPFTIGSYAEF----TPYQFldd 465
Cdd:PLN02676 366 T-DEESRRIEQQPDSET-------KAEIM----EVLRKMfgpnIPEATdilVPRWWSNRFFKGSYSNWpigvSRYEF--- 430
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|...
gi 157817668 466 lKQLSQTEGRIYFAGEHTSLPH-AWIETAIKSGIRAAKNIQDTVDKEATQGQV 517
Cdd:PLN02676 431 -DQIRAPVGRVYFTGEHTSEKYnGYVHGAYLAGIDTANDLLECIKKKKCRKNV 482
|
|
| PLN03000 |
PLN03000 |
amine oxidase |
53-504 |
4.08e-18 |
|
amine oxidase
Pssm-ID: 178578 [Multi-domain] Cd Length: 881 Bit Score: 87.77 E-value: 4.08e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 53 TSPSSKRIVVVGAGMAGLVAAKLLQDAGHEVTILEASNHIGGRVVT--LRNKEEGWHFELGPMRIPESHriihtyiqkfG 130
Cdd:PLN03000 180 AQSSKSSVVIVGAGLSGLAAARQLMRFGFKVTVLEGRKRPGGRVYTkkMEANRVGAAADLGGSVLTGTL----------G 249
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 131 LKLNNFTQHDNNTWYLLRGH--RYRASevkanpeilGYPLRPSEKNKTAEDlFYQAITKVkasncSQLLSLYDSYSTKAY 208
Cdd:PLN03000 250 NPLGIIARQLGSSLYKVRDKcpLYRVD---------GKPVDPDVDLKVEVA-FNQLLDKA-----SKLRQLMGDVSMDVS 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 209 LlkeGMLSRGAVEMIGDMMN-ENAGFYRSLLESLRIAN----------IFTKNDQFTE------ITGGFDQLPNSLNDSL 271
Cdd:PLN03000 315 L---GAALETFRQVSGNDVAtEEMGLFNWHLANLEYANaglvsklslaFWDQDDPYDMggdhcfLPGGNGRLVQALAENV 391
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 272 ------KPGTIHLGSK-VERVVGNESKVEVLYRTDGPTSALYNLTadyviisasakatrlIAFQPPLSPEKIRALRSVHY 344
Cdd:PLN03000 392 pilyekTVQTIRYGSNgVKVIAGNQVYEGDMVLCTVPLGVLKNGS---------------IKFVPELPQRKLDCIKRLGF 456
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 345 NSATKVIFVCNERFWEKDGIHGGYsITDRPSR----FIYYpSYSrPSSKGILLASFTMDDDSFFFTALKPNQVVDIILDD 420
Cdd:PLN03000 457 GLLNKVAMLFPYVFWSTDLDTFGH-LTEDPNYrgefFLFY-SYA-PVAGGPLLIALVAGEAAHKFETMPPTDAVTRVLHI 533
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 421 LAAVH----LIPKEELKRMCPKsevkhWSLDPFTIGSYAEFTPYQFLDDLKQLSQT--EGRIYFAGEHTSLPH-AWIETA 493
Cdd:PLN03000 534 LRGIYepqgINVPDPLQTVCTR-----WGGDPFSLGSYSNVAVGASGDDYDILAESvgDGRLFFAGEATTRRYpATMHGA 608
|
490
....*....|.
gi 157817668 494 IKSGIRAAKNI 504
Cdd:PLN03000 609 FVTGLREAANM 619
|
|
| PLN02268 |
PLN02268 |
probable polyamine oxidase |
60-508 |
3.29e-17 |
|
probable polyamine oxidase
Pssm-ID: 177909 [Multi-domain] Cd Length: 435 Bit Score: 83.97 E-value: 3.29e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 60 IVVVGAGMAGLVAAKLLQDAGHEVTILEASNHIGGRVVTlrNKEEGWHFELGPMRIPE--SHRIIHTYIQKFGLKLNNfT 137
Cdd:PLN02268 3 VIVIGGGIAGIAAARALHDASFKVTLLESRDRIGGRVHT--DYSFGFPVDMGASWLHGvcNENPLAPLIGRLGLPLYR-T 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 138 QHDNNTWYllrghryrasevkaNPEILGYPLRPSEKNKTAEDLFYQ----------AITKVKASNCSQlLSLYDSYSTka 207
Cdd:PLN02268 80 SGDNSVLY--------------DHDLESYALFDMDGNQVPQELVTKvgetferileETEKVRDEHEED-MSLLQAISI-- 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 208 yllkegMLSRGAVEMIGDMMNENAGFYRSLLESLRIA---NIFTKN-DQFTEITG-------GFDQLPNSLNDSLKpgtI 276
Cdd:PLN02268 143 ------VLERHPELRLEGLAHEVLQWYLCRMEGWFAAdadTISLKSwDQEELLEGghglmvrGYDPVINTLAKGLD---I 213
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 277 HLGSKVERVVGNESKVEVLYRtDGPTsalynLTADYVIISASA---KAtRLIAFQPPLSPEKIRALRSVHYNSATKVIFV 353
Cdd:PLN02268 214 RLNHRVTKIVRRYNGVKVTVE-DGTT-----FVADAAIIAVPLgvlKA-NIIKFEPELPEWKEEAISDLGVGIENKIALH 286
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 354 CNERFWEKDGIHGGYSITDRP-SRFI-YYPSYSRPSSKGILLASFTMDDDSffftalkpnqvvdiiLDDLAAVHLIpKEE 431
Cdd:PLN02268 287 FDSVFWPNVEFLGVVAPTSYGcSYFLnLHKATGHPVLVYMPAGRLARDIEK---------------LSDEAAANFA-MSQ 350
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 432 LKRMCP------KSEVKHWSLDPFTIGSYAeFTPYQFLDDL-KQLSQTEGRIYFAGEHTSLPH-AWIETAIKSGIRAAKN 503
Cdd:PLN02268 351 LKKMLPdatepvQYLVSRWGSDPNSLGCYS-YDLVGKPHDLyERLRAPVDNLFFAGEATSSDFpGSVHGAYSTGVMAAEE 429
|
....*
gi 157817668 504 IQDTV 508
Cdd:PLN02268 430 CRMRL 434
|
|
| COG3380 |
COG3380 |
Predicted NAD/FAD-dependent oxidoreductase [General function prediction only]; |
56-111 |
2.52e-15 |
|
Predicted NAD/FAD-dependent oxidoreductase [General function prediction only];
Pssm-ID: 442607 [Multi-domain] Cd Length: 331 Bit Score: 77.23 E-value: 2.52e-15
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 157817668 56 SSKRIVVVGAGMAGLVAAKLLQDAGHEVTILEASNHIGGRVVTLRNkeEGWHFELG 111
Cdd:COG3380 2 SMPDIAIIGAGIAGLAAARALQDAGHEVTVFEKSRGVGGRMATRRL--DGGRFDHG 55
|
|
| COG1233 |
COG1233 |
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and ... |
56-112 |
2.63e-15 |
|
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 440846 [Multi-domain] Cd Length: 491 Bit Score: 78.35 E-value: 2.63e-15
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 157817668 56 SSKRIVVVGAGMAGLVAAKLLQDAGHEVTILEASNHIGGRVVTLrnKEEGWHFELGP 112
Cdd:COG1233 2 MMYDVVVIGAGIGGLAAAALLARAGYRVTVLEKNDTPGGRARTF--ERPGFRFDVGP 56
|
|
| PLN02328 |
PLN02328 |
lysine-specific histone demethylase 1 homolog |
47-512 |
6.98e-14 |
|
lysine-specific histone demethylase 1 homolog
Pssm-ID: 215187 [Multi-domain] Cd Length: 808 Bit Score: 74.64 E-value: 6.98e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 47 AQNGLHTSPSSKRIVVVGAGMAGLVAAKLLQDAGHEVTILEASNHIGGRVVTLRNKEEGWHFEL---GPMRIPESHRIIH 123
Cdd:PLN02328 228 AQLRSFEGVEPANVVVVGAGLAGLVAARQLLSMGFKVVVLEGRARPGGRVKTMKMKGDGVVAAAdlgGSVLTGINGNPLG 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 124 TYIQKFGLKLNNFtqHDNNTWYLLRGhRYRASEVKANPEIlgyplrpsEKNKTAEDL--FYQAITKVKASNCSQLLSLYD 201
Cdd:PLN02328 308 VLARQLGLPLHKV--RDICPLYLPDG-KAVDAEIDSKIEA--------SFNKLLDRVckLRQAMIEEVKSVDVNLGTALE 376
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 202 SYStKAYLLKEGMLSRGAVEM-IGDMMNENAgfyrSLLESLRIAnIFTKNDQFTE------ITGGFDQLPNSLNDSLKpg 274
Cdd:PLN02328 377 AFR-HVYKVAEDPQERMLLNWhLANLEYANA----SLMSNLSMA-YWDQDDPYEMggdhcfIPGGNDTFVRELAKDLP-- 448
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 275 tIHLGSKVErvvgneskvEVLYRTDGptsalynltadyVIISASAKATR----------------LIAFQPPLSPEKIRA 338
Cdd:PLN02328 449 -IFYERTVE---------SIRYGVDG------------VIVYAGGQEFHgdmvlctvplgvlkkgSIEFYPELPQRKKDA 506
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 339 LRSVHYNSATKV--IFVCNerFWEKDGIHGGYSITDRPSR---FIYYpSYSRPSSkGILLASFTMDDDSFFFTALKPNQV 413
Cdd:PLN02328 507 IQRLGYGLLNKValLFPYN--FWGGEIDTFGHLTEDPSMRgefFLFY-SYSSVSG-GPLLIALVAGDAAVKFETLSPVES 582
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 414 VDIILDDLAAVH----LIPKEELKRMCPKsevkhWSLDPFTIGSYAEFTPYQFLDDLKQLSQT--EGRIYFAGEHTSLPH 487
Cdd:PLN02328 583 VKRVLQILRGIFhpkgIVVPDPVQAVCTR-----WGKDCFTYGSYSYVAVGSSGDDYDILAESvgDGRVFFAGEATNKQY 657
|
490 500
....*....|....*....|....*.
gi 157817668 488 -AWIETAIKSGIRAAKNIQDTVDKEA 512
Cdd:PLN02328 658 pATMHGAFLSGMREAANILRVARRRS 683
|
|
| NAD_binding_8 |
pfam13450 |
NAD(P)-binding Rossmann-like domain; |
62-125 |
1.54e-13 |
|
NAD(P)-binding Rossmann-like domain;
Pssm-ID: 433218 [Multi-domain] Cd Length: 67 Bit Score: 65.25 E-value: 1.54e-13
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 157817668 62 VVGAGMAGLVAAKLLQDAGHEVTILEASNHIGGRVVTLRNKeeGWHFELGPmripeshRIIHTY 125
Cdd:pfam13450 1 IVGAGLAGLVAAALLAKRGFRVLVLEKRDRLGGNAYSYRVP--GYVFDYGA-------HIFHGS 55
|
|
| PLN02568 |
PLN02568 |
polyamine oxidase |
59-501 |
3.61e-13 |
|
polyamine oxidase
Pssm-ID: 215308 [Multi-domain] Cd Length: 539 Bit Score: 71.78 E-value: 3.61e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 59 RIVVVGAGMAGLVAAKLLQDAGH-----EVTILEASNHIGGRVVTlrNKEEGWHFELGPMRIpesHRIIHTYIQKFGLKL 133
Cdd:PLN02568 7 RIVIIGAGMAGLTAANKLYTSSAandmfELTVVEGGDRIGGRINT--SEFGGERIEMGATWI---HGIGGSPVYKIAQEA 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 134 NNFtqHDNNTWYLLRGHRYRASEVKANpeilGYPLRPSEKNKTAEdLFYQ----AITKVKASNCSQLLSLYDSYSTKAYL 209
Cdd:PLN02568 82 GSL--ESDEPWECMDGFPDRPKTVAEG----GFEVDPSIVESIST-LFRGlmddAQGKLIEPSEVDEVDFVKLAAKAARV 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 210 LKEG-------MLSRGAVEMIGDMMNEN-----AGFYRSLLESlriaNIFT--KNDQFT--------------------- 254
Cdd:PLN02568 155 CESGgggsvgsFLRRGLDAYWDSVSADEqikgyGGWSRKLLEE----AIFTmhENTQRTytsaddlstldlaaeseyrmf 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 255 ---EIT--GGFDQLPNSLNDSLKPGTIHLGSKVERVVGNESKVEvLYRTDGPTsalynLTADYVIISAS---AKA---TR 323
Cdd:PLN02568 231 pgeEITiaKGYLSVIEALASVLPPGTIQLGRKVTRIEWQDEPVK-LHFADGST-----MTADHVIVTVSlgvLKAgigED 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 324 LIAFQPPLSPEKIRALRSVHYNSATKVIFVCNERFWEKDGIHGGYSI-------TDRPSRFIYYPSYSR------PSSKG 390
Cdd:PLN02568 305 SGLFSPPLPDFKTDAISRLGFGVVNKLFVELSPRPDGSPEDVAKFPFlqmafhrSDSEARHDKIPWWMRrtasicPIHKN 384
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 391 --ILLASFTmDDDSFFFTALKPNQVVDIILDDLAAvhLIPKEELKRMCP------------------KSEVKH--WSLDP 448
Cdd:PLN02568 385 ssVLLSWFA-GKEALELEKLSDEEIIRGVQTTLSS--FLKRRVAGLGSQshplcnggassndgsrwkFVKVLKskWGTDP 461
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 157817668 449 FTIGSY---------------AEftPYQFLDDLKQLSQTEGRIYFAGE-----HTSLPHAwietAIKSGIRAA 501
Cdd:PLN02568 462 LFLGSYsyvavgssgddldrmAE--PLPRISDHDQAGGPPLQLLFAGEathrtHYSTTHG----AYFSGLREA 528
|
|
| PRK07233 |
PRK07233 |
hypothetical protein; Provisional |
59-416 |
2.13e-12 |
|
hypothetical protein; Provisional
Pssm-ID: 235977 [Multi-domain] Cd Length: 434 Bit Score: 69.15 E-value: 2.13e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 59 RIVVVGAGMAGLVAAKLLQDAGHEVTILEASNHIGGRVVTLRnkEEGW------HFelgpmrIPESHRIIHTYIQKFGL- 131
Cdd:PRK07233 1 KIAIVGGGIAGLAAAYRLAKRGHEVTVFEADDQLGGLAASFE--FGGLpierfyHH------IFKSDEALLELLDELGLe 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 132 -KLnNFTQHDNNTWYllRGHRYRASevkaNP-EILGYP-LRPSEKNKTAedLFYQAITKVKAsncsqlLSLYDSYSTKAY 208
Cdd:PRK07233 73 dKL-RWRETKTGYYV--DGKLYPLG----TPlELLRFPhLSLIDKFRLG--LLTLLARRIKD------WRALDKVPAEEW 137
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 209 LLKEgmLSRGAVEMigdmmnenagFYRSLLES---------------LRIANI-FTKNDQFTE----ITGGFDQLPNSLN 268
Cdd:PRK07233 138 LRRW--SGEGVYEV----------FWEPLLESkfgdyaddvsaawlwSRIKRRgNRRYSLFGEklgyLEGGFATLIDALA 205
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 269 DSL--KPGTIHLGSKVERVVGNESKVEVLyRTDGPTsalynLTADYVIISASAKATRLIAfqPPLSPEKIRALRSVHYNS 346
Cdd:PRK07233 206 EAIeaRGGEIRLGTPVTSVVIDGGGVTGV-EVDGEE-----EDFDAVISTAPPPILARLV--PDLPADVLARLRRIDYQG 277
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 347 ATKVIFVCNER----FW---EKDGI----------------HGGYSItdrpsrfIYYPSYSRPSSKGillasFTMDDDSF 403
Cdd:PRK07233 278 VVCMVLKLRRPltdyYWlniNDPGApfggviehtnlvpperYGGEHL-------VYLPKYLPGDHPL-----WQMSDEEL 345
|
410 420
....*....|....*....|...
gi 157817668 404 ----------FFTALKPNQVVDI 416
Cdd:PRK07233 346 ldrflsylrkMFPDFDRDDVRAV 368
|
|
| COG3349 |
COG3349 |
Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function ... |
57-507 |
3.31e-12 |
|
Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function prediction only];
Pssm-ID: 442577 [Multi-domain] Cd Length: 445 Bit Score: 68.34 E-value: 3.31e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 57 SKRIVVVGAGMAGLVAAKLLQDAGHEVTILEASNHIGGRVVTLRNKEEGWHFELGPMRIPESHRIIHTYIQKFGLkLNNF 136
Cdd:COG3349 3 PPRVVVVGGGLAGLAAAVELAEAGFRVTLLEARPRLGGRARSFPDPDTGLPIDNGQHVLLGCYRNTLDLLRRIGA-ADNL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 137 TQHDNNTWYLLRGhryRASEVKANP---------EILGYP-LRPSEKNKTAEDLFyqaitkvkaSNCSQLLSLYDSYSTK 206
Cdd:COG3349 82 VGPEPLQFPLPGG---RRWTLRAPRlpaplhllrALLRAPgLSLADRLALLRLLT---------ACRERRWRELDDISVA 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 207 AYLLKEGMlsrgavemigdmmneNAGFYRSLLESLRIANIFTKNDQ--------------FTEITGGFDQLPN-SLNDSL 271
Cdd:COG3349 150 DWLRRHGQ---------------SPRLIRRLWEPLLLAALNTPPEQasarlaltvlretlLAGPAASDLLVPRgPLSELF 214
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 272 -KP---------GTIHLGSKVERVVGNESKVEVLYRTDGPTsalynLTADYVIISASAK-ATRLIAFQPPL-SPEKIRAL 339
Cdd:COG3349 215 vDPalayleargGEVRLGTRVRALEFDGGRVTGLVLADGET-----VPADAVVLAVPPEvAARLLPELARLpELGLLAPL 289
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 340 RSVHYNSAtkvifvcneRFW---EKDGIHGGYS-ITDRPSRFIYYPSYSRPSSKGILLASFTMDDDsffFTALKPNQVVD 415
Cdd:COG3349 290 EYSPIVNV---------HLWldrPVTLGPPPFAgLVGSTSQWVFDRGAGDGGQGGVLSVVISAADR---LLDLSREELAA 357
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 416 IILDDLAAvhLIPKEELKRMCPKSEVK-HWSLDPFTIGSYAeFTPYQflddlkqlsQTEGR-IYFAGE--HTSLPhAWIE 491
Cdd:COG3349 358 EVWAELAA--LLPAAREALPVWSRVVReKRATFAATPGSDR-LRPGA---------RTPIPnLFLAGDwtATGLP-ATME 424
|
490
....*....|....*.
gi 157817668 492 TAIKSGIRAAKNIQDT 507
Cdd:COG3349 425 GAVRSGRRAANAILAR 440
|
|
| PLN02976 |
PLN02976 |
amine oxidase |
58-100 |
1.72e-10 |
|
amine oxidase
Pssm-ID: 215527 [Multi-domain] Cd Length: 1713 Bit Score: 64.12 E-value: 1.72e-10
10 20 30 40
....*....|....*....|....*....|....*....|...
gi 157817668 58 KRIVVVGAGMAGLVAAKLLQDAGHEVTILEASNHIGGRVVTLR 100
Cdd:PLN02976 694 KKIIVVGAGPAGLTAARHLQRQGFSVTVLEARSRIGGRVYTDR 736
|
|
| PRK11883 |
PRK11883 |
protoporphyrinogen oxidase; Reviewed |
58-112 |
3.92e-10 |
|
protoporphyrinogen oxidase; Reviewed
Pssm-ID: 237009 [Multi-domain] Cd Length: 451 Bit Score: 61.79 E-value: 3.92e-10
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 157817668 58 KRIVVVGAGMAGLVAAKLLQDAG--HEVTILEASNHIGGRVVTLRnkEEGWHFELGP 112
Cdd:PRK11883 1 KKVAIIGGGITGLSAAYRLHKKGpdADITLLEASDRLGGKIQTVR--KDGFPIELGP 55
|
|
| proto_IX_ox |
TIGR00562 |
protoporphyrinogen oxidase; This enzyme oxidizes protoporphyrinogen IX to protoporphyrin IX, a ... |
58-503 |
3.16e-09 |
|
protoporphyrinogen oxidase; This enzyme oxidizes protoporphyrinogen IX to protoporphyrin IX, a precursor of heme and chlorophyll. Bacillus subtilis HemY also has coproporphyrinogen III to coproporphyrin III oxidase activity in a heterologous expression system, although the role for this activity in vivo is unclear. This protein is a flavoprotein and has a beta-alpha-beta dinucleotide binding motif near the amino end. [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin]
Pssm-ID: 213540 [Multi-domain] Cd Length: 462 Bit Score: 59.08 E-value: 3.16e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 58 KRIVVVGAGMAGLVAA----KLLQDAGHEVTILEASNHIGGRVVTLrnKEEGWHFELGPMRIPESHRIIHTYIQKFGLKl 133
Cdd:TIGR00562 3 KHVVIIGGGISGLCAAyyleKEIPELPVELTLVEASDRVGGKIQTV--KEDGYLIERGPDSFLERKKSAPDLVKDLGLE- 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 134 nNFTQHDNNTWYLLRGHRYRASEVKANP-EILGYPLRP-SEKNKTAEDLFYQA--------------------ITKVKAS 191
Cdd:TIGR00562 80 -HVLVSDATGQRYVLVNRGKLMPVPTKIaPFVKTGLFSlGGKLRAGMDFIRPAspgkdesveefvrrrfgdevVENLIEP 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 192 NCS-------QLLSLYDSYStKAYLLKEGMLSrgaveMIGDMMNENAGFYRSLLESLriANIFTKNdqFTEITGGFDQLP 264
Cdd:TIGR00562 159 LLSgiyagdpSKLSLKSTFP-KFYQTEQKHGS-----LILGMKKTRNLPQGSGLQLT--AKKQGQD--FQTLATGLETLP 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 265 NSLNDSLKPGTIHLGSKVERVVgNESKVEVLYRTDGPTsalynLTADYVIISASA-KATRLIafqPPLSPEKIRALRSVH 343
Cdd:TIGR00562 229 EEIEKRLKLTKVYKGTKVTKLS-HRGSNYTLELDNGVT-----VETDSVVVTAPHkAAAGLL---SELSNSASSHLDKIH 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 344 YNSatkvIFVCNERFWEK--DGIHGGYS-ITDRPSRF-----IY----YPSYSRPSSkgILLASFT--MDDDSFFftALK 409
Cdd:TIGR00562 300 SPP----VANVNLGFPEGsvDGELEGFGfLISRSSKFailgcIFtsklFPNRAPPGK--TLLTAYIggATDESIV--DLS 371
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 410 PNQVVDIILDDLAAVHLIPKEELkrmcpKSEVKHW--SLDPFTIGSyaeftpYQFLDDLKQLSQTegriyfAGEHTSLPH 487
Cdd:TIGR00562 372 ENEIINIVLRDLKKVLNINNEPE-----MLCVTRWhrAIPQYHVGH------DQRLKEARELLES------AYPGVFLTG 434
|
490
....*....|....*..
gi 157817668 488 AWIE-TAIKSGIRAAKN 503
Cdd:TIGR00562 435 NSFEgVGIPDCIDQGKA 451
|
|
| HdrA |
COG1148 |
Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion]; |
52-100 |
4.75e-09 |
|
Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion];
Pssm-ID: 440762 [Multi-domain] Cd Length: 563 Bit Score: 58.72 E-value: 4.75e-09
10 20 30 40
....*....|....*....|....*....|....*....|....*....
gi 157817668 52 HTSPSSKRIVVVGAGMAGLVAAKLLQDAGHEVTILEASNHIGGRVVTLR 100
Cdd:COG1148 135 IKVPVNKRALVIGGGIAGMTAALELAEQGYEVYLVEKEPELGGRAAQLH 183
|
|
| PRK07208 |
PRK07208 |
hypothetical protein; Provisional |
55-114 |
5.03e-09 |
|
hypothetical protein; Provisional
Pssm-ID: 235967 [Multi-domain] Cd Length: 479 Bit Score: 58.36 E-value: 5.03e-09
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 55 PSSKRIVVVGAGMAGLVAAKLLQDAGHEVTILEASNHIGGRVVTLRNKeeGWHFELGPMR 114
Cdd:PRK07208 2 TNKKSVVIIGAGPAGLTAAYELLKRGYPVTVLEADPVVGGISRTVTYK--GNRFDIGGHR 59
|
|
| Ppro0129 |
COG2907 |
Predicted flavin-containing amine oxidase [General function prediction only]; |
56-94 |
9.77e-09 |
|
Predicted flavin-containing amine oxidase [General function prediction only];
Pssm-ID: 442151 [Multi-domain] Cd Length: 423 Bit Score: 57.43 E-value: 9.77e-09
10 20 30
....*....|....*....|....*....|....*....
gi 157817668 56 SSKRIVVVGAGMAGLVAAKLLQDAgHEVTILEASNHIGG 94
Cdd:COG2907 2 ARMRIAVIGSGISGLTAAWLLSRR-HDVTLFEANDRLGG 39
|
|
| PLN02529 |
PLN02529 |
lysine-specific histone demethylase 1 |
51-504 |
1.17e-08 |
|
lysine-specific histone demethylase 1
Pssm-ID: 178144 [Multi-domain] Cd Length: 738 Bit Score: 57.59 E-value: 1.17e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 51 LHTSP-----SSKRIVVVGAGMAGLVAAKLLQDAGHEVTILEASNHIGGRVVTLRNKEEGWH--FELGPMRIPeshriih 123
Cdd:PLN02529 149 SFASPipeegTEGSVIIVGAGLAGLAAARQLLSFGFKVVVLEGRNRPGGRVYTQKMGRKGQFaaVDLGGSVIT------- 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 124 tyiqkfGLklnnftqHDNNTWYLLRG-----HRYRASEVKANPEilGYPLrPSEKNKTAEDLFYQAITKV---------- 188
Cdd:PLN02529 222 ------GI-------HANPLGVLARQlsiplHKVRDNCPLYKPD--GALV-DKEIDSNIEFIFNKLLDKVtelrqimggf 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 189 --KASNCSQLLSLYDSYSTKAYLLKEGMLSRGavemIGDMMNENAGFYRSLleslrIANIFTKNDQFTE------ITGGF 260
Cdd:PLN02529 286 anDISLGSVLERLRQLYGVARSTEERQLLDWH----LANLEYANAGCLSDL-----SAAYWDQDDPYEMggdhcfLAGGN 356
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 261 DQLPNSLNDSLKpgtIHLGSKVERVVGNESKVEVLyrtdgptSALYNLTADYVI--ISASAKATRLIAFQPPLSPEKIRA 338
Cdd:PLN02529 357 WRLINALCEGVP---IFYGKTVDTIKYGNDGVEVI-------AGSQVFQADMVLctVPLGVLKKRTIRFEPELPRRKLAA 426
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 339 LRSVHYNSATKVIFVCNERFWEKD----GIHGGYSItDRPSRFIYYPSYSrpSSKGILLASFTMDDDSFFFTALKPNQVV 414
Cdd:PLN02529 427 IDRLGFGLLNKVAMVFPSVFWGEEldtfGCLNESSN-KRGEFFLFYGYHT--VSGGPALVALVAGEAAQRFENTDPSTLL 503
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 415 DIILDDLAAVHlIPK-----EELKRMCPKsevkhWSLDPFTIGSYAEFTPYQFLDDLKQLSQT-EGRIYFAGEHTSLPH- 487
Cdd:PLN02529 504 HRVLSVLRGIY-NPKginvpDPIQTICTR-----WGSDPLSYGSYSHVRVQSSGSDYDILAESvSGRLFFAGEATTRQYp 577
|
490
....*....|....*..
gi 157817668 488 AWIETAIKSGIRAAKNI 504
Cdd:PLN02529 578 ATMHGAFLSGLREASRI 594
|
|
| crtI_fam |
TIGR02734 |
phytoene desaturase; Phytoene is converted to lycopene by desaturation at four (two ... |
60-112 |
1.47e-08 |
|
phytoene desaturase; Phytoene is converted to lycopene by desaturation at four (two symmetrical pairs of) sites. This is achieved by two enzymes (crtP and crtQ) in cyanobacteria (Gloeobacter being an exception) and plants, but by a single enzyme in most other bacteria and in fungi. This single enzyme is called the bacterial-type phytoene desaturase, or CrtI. Most members of this family, part of the larger pfam01593, which also contains amino oxidases, are CrtI itself; it is likely that all members act on either phytoene or on related compounds such as dehydrosqualene, for carotenoid biosynthesis. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other]
Pssm-ID: 274273 [Multi-domain] Cd Length: 495 Bit Score: 56.90 E-value: 1.47e-08
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|...
gi 157817668 60 IVVVGAGMAGLVAAKLLQDAGHEVTILEASNHIGGRVVTLRnkEEGWHFELGP 112
Cdd:TIGR02734 1 AVVIGAGFGGLALAIRLAAAGIPVTVVEQRDKPGGRAGVLE--DDGFRFDTGP 51
|
|
| CzcO |
COG2072 |
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ... |
53-94 |
1.64e-08 |
|
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];
Pssm-ID: 441675 [Multi-domain] Cd Length: 414 Bit Score: 56.79 E-value: 1.64e-08
10 20 30 40
....*....|....*....|....*....|....*....|..
gi 157817668 53 TSPSSKRIVVVGAGMAGLVAAKLLQDAGHEVTILEASNHIGG 94
Cdd:COG2072 2 AATEHVDVVVIGAGQAGLAAAYHLRRAGIDFVVLEKADDVGG 43
|
|
| UbiH |
COG0654 |
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ... |
55-99 |
3.14e-08 |
|
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis
Pssm-ID: 440419 [Multi-domain] Cd Length: 326 Bit Score: 55.33 E-value: 3.14e-08
10 20 30 40
....*....|....*....|....*....|....*....|....*..
gi 157817668 55 PSSKRIVVVGAGMAGLVAAKLLQDAGHEVTILEASNHI--GGRVVTL 99
Cdd:COG0654 1 MMRTDVLIVGGGPAGLALALALARAGIRVTVVERAPPPrpDGRGIAL 47
|
|
| PLN02487 |
PLN02487 |
zeta-carotene desaturase |
59-111 |
5.57e-08 |
|
zeta-carotene desaturase
Pssm-ID: 215268 [Multi-domain] Cd Length: 569 Bit Score: 55.19 E-value: 5.57e-08
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|...
gi 157817668 59 RIVVVGAGMAGLVAAKLLQDAGHEVTILEASNHIGGRVVTLRNKeEGWHFELG 111
Cdd:PLN02487 77 KVAIIGAGLAGMSTAVELLDQGHEVDIYESRPFIGGKVGSFVDK-NGNHIEMG 128
|
|
| PLN02612 |
PLN02612 |
phytoene desaturase |
41-111 |
6.26e-08 |
|
phytoene desaturase
Pssm-ID: 215330 [Multi-domain] Cd Length: 567 Bit Score: 55.23 E-value: 6.26e-08
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 157817668 41 EALLLIAQngLHTSPS-SK--RIVVVGAGMAGLVAAKLLQDAGHEVTILEASNHIGGRVVTLRNKEEGWhFELG 111
Cdd:PLN02612 76 EAAALSAS--FRSAPRpAKplKVVIAGAGLAGLSTAKYLADAGHKPILLEARDVLGGKVAAWKDEDGDW-YETG 146
|
|
| NirB |
COG1251 |
NAD(P)H-nitrite reductase, large subunit [Energy production and conversion]; |
39-97 |
3.42e-07 |
|
NAD(P)H-nitrite reductase, large subunit [Energy production and conversion];
Pssm-ID: 440863 [Multi-domain] Cd Length: 402 Bit Score: 52.45 E-value: 3.42e-07
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 157817668 39 DYEALLLIAQNGlhtspssKRIVVVGAGMAGLVAAKLLQDAGHEVTILEASNHIGGRVV 97
Cdd:COG1251 131 DADALRAALAPG-------KRVVVIGGGLIGLEAAAALRKRGLEVTVVERAPRLLPRQL 182
|
|
| GltD |
COG0493 |
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport ... |
55-94 |
3.92e-07 |
|
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport and metabolism, General function prediction only]; NADPH-dependent glutamate synthase beta chain or related oxidoreductase is part of the Pathway/BioSystem: Glutamine biosynthesis
Pssm-ID: 440259 [Multi-domain] Cd Length: 434 Bit Score: 52.44 E-value: 3.92e-07
10 20 30 40
....*....|....*....|....*....|....*....|
gi 157817668 55 PSSKRIVVVGAGMAGLVAAKLLQDAGHEVTILEASNHIGG 94
Cdd:COG0493 119 RTGKKVAVVGSGPAGLAAAYQLARAGHEVTVFEALDKPGG 158
|
|
| PRK11749 |
PRK11749 |
dihydropyrimidine dehydrogenase subunit A; Provisional |
55-94 |
8.93e-07 |
|
dihydropyrimidine dehydrogenase subunit A; Provisional
Pssm-ID: 236967 [Multi-domain] Cd Length: 457 Bit Score: 51.33 E-value: 8.93e-07
10 20 30 40
....*....|....*....|....*....|....*....|
gi 157817668 55 PSSKRIVVVGAGMAGLVAAKLLQDAGHEVTILEASNHIGG 94
Cdd:PRK11749 138 KTGKKVAVIGAGPAGLTAAHRLARKGYDVTIFEARDKAGG 177
|
|
| PRK12771 |
PRK12771 |
putative glutamate synthase (NADPH) small subunit; Provisional |
54-94 |
1.40e-06 |
|
putative glutamate synthase (NADPH) small subunit; Provisional
Pssm-ID: 237198 [Multi-domain] Cd Length: 564 Bit Score: 51.03 E-value: 1.40e-06
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 157817668 54 SPSSKRIVVVGAGMAGLVAAKLLQDAGHEVTILEASNHIGG 94
Cdd:PRK12771 134 PDTGKRVAVIGGGPAGLSAAYHLRRMGHAVTIFEAGPKLGG 174
|
|
| PRK12814 |
PRK12814 |
putative NADPH-dependent glutamate synthase small subunit; Provisional |
56-94 |
2.67e-06 |
|
putative NADPH-dependent glutamate synthase small subunit; Provisional
Pssm-ID: 139246 [Multi-domain] Cd Length: 652 Bit Score: 50.11 E-value: 2.67e-06
10 20 30
....*....|....*....|....*....|....*....
gi 157817668 56 SSKRIVVVGAGMAGLVAAKLLQDAGHEVTILEASNHIGG 94
Cdd:PRK12814 192 SGKKVAIIGAGPAGLTAAYYLLRKGHDVTIFDANEQAGG 230
|
|
| gltD |
PRK12810 |
glutamate synthase subunit beta; Reviewed |
52-94 |
2.97e-06 |
|
glutamate synthase subunit beta; Reviewed
Pssm-ID: 237213 [Multi-domain] Cd Length: 471 Bit Score: 49.78 E-value: 2.97e-06
10 20 30 40
....*....|....*....|....*....|....*....|...
gi 157817668 52 HTSPSSKRIVVVGAGMAGLVAAKLLQDAGHEVTILEASNHIGG 94
Cdd:PRK12810 138 PVKRTGKKVAVVGSGPAGLAAADQLARAGHKVTVFERADRIGG 180
|
|
| PRK07236 |
PRK07236 |
hypothetical protein; Provisional |
53-100 |
4.89e-06 |
|
hypothetical protein; Provisional
Pssm-ID: 235980 [Multi-domain] Cd Length: 386 Bit Score: 48.76 E-value: 4.89e-06
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|..
gi 157817668 53 TSPSSKRIVVVGAGMAGLVAAKLLQDAGHEVTILEASNHI----GGRVVTLR 100
Cdd:PRK07236 2 THMSGPRAVVIGGSLGGLFAALLLRRAGWDVDVFERSPTEldgrGAGIVLQP 53
|
|
| PRK06753 |
PRK06753 |
hypothetical protein; Provisional |
59-146 |
7.55e-06 |
|
hypothetical protein; Provisional
Pssm-ID: 168661 [Multi-domain] Cd Length: 373 Bit Score: 48.15 E-value: 7.55e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 59 RIVVVGAGMAGLVAAKLLQDAGHEVTILEASNHIggrvvtlrnKEEGWHFELGP--MRIPESHRIIHTyIQKFGLKLNNF 136
Cdd:PRK06753 2 KIAIIGAGIGGLTAAALLQEQGHEVKVFEKNESV---------KEVGAGIGIGDnvIKKLGNHDLAKG-IKNAGQILSTM 71
|
90
....*....|
gi 157817668 137 TQHDNNTWYL 146
Cdd:PRK06753 72 NLLDDKGTLL 81
|
|
| COG3573 |
COG3573 |
Predicted oxidoreductase [General function prediction only]; |
60-94 |
1.10e-05 |
|
Predicted oxidoreductase [General function prediction only];
Pssm-ID: 442794 [Multi-domain] Cd Length: 551 Bit Score: 47.87 E-value: 1.10e-05
10 20 30
....*....|....*....|....*....|....*..
gi 157817668 60 IVVVGAGMAGLVAAKLLQDAGHEVTIL--EASNHIGG 94
Cdd:COG3573 8 VIVVGAGLAGLVAAAELADAGRRVLLLdqEPEANLGG 44
|
|
| DadA |
COG0665 |
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]; |
57-94 |
1.41e-05 |
|
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
Pssm-ID: 440429 [Multi-domain] Cd Length: 364 Bit Score: 47.21 E-value: 1.41e-05
10 20 30
....*....|....*....|....*....|....*...
gi 157817668 57 SKRIVVVGAGMAGLVAAKLLQDAGHEVTILEAsNHIGG 94
Cdd:COG0665 2 TADVVVIGGGIAGLSTAYHLARRGLDVTVLER-GRPGS 38
|
|
| PLN02576 |
PLN02576 |
protoporphyrinogen oxidase |
50-112 |
1.66e-05 |
|
protoporphyrinogen oxidase
Pssm-ID: 215314 [Multi-domain] Cd Length: 496 Bit Score: 47.31 E-value: 1.66e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 157817668 50 GLHTSPSSKRIVVVGAGMAGLVAA-KLLQDAGHEVTILEASNHIGGRVVTlrNKEEGWHFELGP 112
Cdd:PLN02576 5 EGSAAASSKDVAVVGAGVSGLAAAyALASKHGVNVLVTEARDRVGGNITS--VSEDGFIWEEGP 66
|
|
| PRK12834 |
PRK12834 |
putative FAD-binding dehydrogenase; Reviewed |
60-94 |
1.98e-05 |
|
putative FAD-binding dehydrogenase; Reviewed
Pssm-ID: 183782 [Multi-domain] Cd Length: 549 Bit Score: 47.20 E-value: 1.98e-05
10 20 30
....*....|....*....|....*....|....*..
gi 157817668 60 IVVVGAGMAGLVAAKLLQDAGHEVTIL--EASNHIGG 94
Cdd:PRK12834 7 VIVVGAGLAGLVAAAELADAGKRVLLLdqENEANLGG 43
|
|
| Pyr_redox |
pfam00070 |
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ... |
59-111 |
2.23e-05 |
|
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.
Pssm-ID: 425450 [Multi-domain] Cd Length: 80 Bit Score: 42.58 E-value: 2.23e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 157817668 59 RIVVVGAGMAGLVAAKLLQDAGHEVTILEASNHIG-------GRVVTLRNKEEGWHFELG 111
Cdd:pfam00070 1 RVVVVGGGYIGLELAGALARLGSKVTVVERRDRLLpgfdpeiAKILQEKLEKNGIEFLLN 60
|
|
| Ndh |
COG1252 |
NADH dehydrogenase, FAD-containing subunit [Energy production and conversion]; |
58-91 |
2.82e-05 |
|
NADH dehydrogenase, FAD-containing subunit [Energy production and conversion];
Pssm-ID: 440864 [Multi-domain] Cd Length: 386 Bit Score: 46.28 E-value: 2.82e-05
10 20 30
....*....|....*....|....*....|....*..
gi 157817668 58 KRIVVVGAGMAGLVAAKLLQD---AGHEVTILEASNH 91
Cdd:COG1252 2 KRIVIVGGGFAGLEAARRLRKklgGDAEVTLIDPNPY 38
|
|
| DAO |
pfam01266 |
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ... |
59-94 |
3.73e-05 |
|
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.
Pssm-ID: 426168 [Multi-domain] Cd Length: 339 Bit Score: 45.85 E-value: 3.73e-05
10 20 30
....*....|....*....|....*....|....*.
gi 157817668 59 RIVVVGAGMAGLVAAKLLQDAGHEVTILEASNHIGG 94
Cdd:pfam01266 1 DVVVIGGGIVGLSTAYELARRGLSVTLLERGDDPGS 36
|
|
| FixC |
COG0644 |
Dehydrogenase (flavoprotein) [Energy production and conversion]; |
65-98 |
6.90e-05 |
|
Dehydrogenase (flavoprotein) [Energy production and conversion];
Pssm-ID: 440409 [Multi-domain] Cd Length: 281 Bit Score: 44.57 E-value: 6.90e-05
10 20 30
....*....|....*....|....*....|....
gi 157817668 65 AGMAGLVAAKLLQDAGHEVTILEASNHIGGRVVT 98
Cdd:COG0644 1 AGPAGSAAARRLARAGLSVLLLEKGSFPGDKICG 34
|
|
| PLN02172 |
PLN02172 |
flavin-containing monooxygenase FMO GS-OX |
56-126 |
8.95e-05 |
|
flavin-containing monooxygenase FMO GS-OX
Pssm-ID: 215116 [Multi-domain] Cd Length: 461 Bit Score: 44.85 E-value: 8.95e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 157817668 56 SSKRIVVVGAGMAGLVAAKLLQDAGHEVTILEASNHIGGRVVTLRNKEEgwhfelGPMRIPESHRIIHTYI 126
Cdd:PLN02172 9 NSQHVAVIGAGAAGLVAARELRREGHTVVVFEREKQVGGLWVYTPKSES------DPLSLDPTRSIVHSSV 73
|
|
| Pyr_redox_2 |
pfam07992 |
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ... |
58-88 |
1.53e-04 |
|
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.
Pssm-ID: 400379 [Multi-domain] Cd Length: 301 Bit Score: 43.85 E-value: 1.53e-04
10 20 30
....*....|....*....|....*....|.
gi 157817668 58 KRIVVVGAGMAGLVAAKLLQDAGHEVTILEA 88
Cdd:pfam07992 1 YDVVVIGGGPAGLAAALTLAQLGGKVTLIED 31
|
|
| Pyr_redox_2 |
pfam07992 |
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ... |
49-92 |
2.16e-04 |
|
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.
Pssm-ID: 400379 [Multi-domain] Cd Length: 301 Bit Score: 43.46 E-value: 2.16e-04
10 20 30 40
....*....|....*....|....*....|....*....|....
gi 157817668 49 NGLHTSPSSKRIVVVGAGMAGLVAAKLLQDAGHEVTILEASNHI 92
Cdd:pfam07992 144 EALRLKLLPKRVVVVGGGYIGVELAAALAKLGKEVTLIEALDRL 187
|
|
| FadH2 |
COG0446 |
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase ... |
58-96 |
4.14e-04 |
|
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase [Lipid transport and metabolism];
Pssm-ID: 440215 [Multi-domain] Cd Length: 322 Bit Score: 42.49 E-value: 4.14e-04
10 20 30
....*....|....*....|....*....|....*....
gi 157817668 58 KRIVVVGAGMAGLVAAKLLQDAGHEVTILEASNHIGGRV 96
Cdd:COG0446 125 KRAVVIGGGPIGLELAEALRKRGLKVTLVERAPRLLGVL 163
|
|
| BetA |
COG2303 |
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General ... |
61-109 |
4.39e-04 |
|
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]; Choline dehydrogenase or related flavoprotein is part of the Pathway/BioSystem: Non-phosphorylated Entner-Doudoroff pathway
Pssm-ID: 441878 [Multi-domain] Cd Length: 531 Bit Score: 42.89 E-value: 4.39e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 157817668 61 VVVGAGMAG-LVAAKLLQDAGHEVTILEAsnhiGGR------------VVTLRNKEEGWHFE 109
Cdd:COG2303 8 VIVGAGSAGcVLANRLSEDAGLRVLLLEA----GGRdddplirmpagyAKLLGNPRYDWRYE 65
|
|
| SdhA |
COG1053 |
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and ... |
60-94 |
5.20e-04 |
|
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit is part of the Pathway/BioSystem: TCA cycle
Pssm-ID: 440673 [Multi-domain] Cd Length: 443 Bit Score: 42.51 E-value: 5.20e-04
10 20 30
....*....|....*....|....*....|....*
gi 157817668 60 IVVVGAGMAGLVAAKLLQDAGHEVTILEASNHIGG 94
Cdd:COG1053 6 VVVVGSGGAGLRAALEAAEAGLKVLVLEKVPPRGG 40
|
|
| PRK13984 |
PRK13984 |
putative oxidoreductase; Provisional |
55-94 |
1.21e-03 |
|
putative oxidoreductase; Provisional
Pssm-ID: 172486 [Multi-domain] Cd Length: 604 Bit Score: 41.68 E-value: 1.21e-03
10 20 30 40
....*....|....*....|....*....|....*....|
gi 157817668 55 PSSKRIVVVGAGMAGLVAAKLLQDAGHEVTILEASNHIGG 94
Cdd:PRK13984 281 KKNKKVAIVGSGPAGLSAAYFLATMGYEVTVYESLSKPGG 320
|
|
| YhiN |
COG2081 |
Predicted flavoprotein YhiN [General function prediction only]; |
61-93 |
1.48e-03 |
|
Predicted flavoprotein YhiN [General function prediction only];
Pssm-ID: 441684 [Multi-domain] Cd Length: 402 Bit Score: 40.80 E-value: 1.48e-03
10 20 30
....*....|....*....|....*....|...
gi 157817668 61 VVVGAGMAGLVAAKLLQDAGHEVTILEASNHIG 93
Cdd:COG2081 1 IVIGAGAAGLMAAITAAERGARVLLLEKNPKVG 33
|
|
| FAD_binding_2 |
pfam00890 |
FAD binding domain; This family includes members that bind FAD. This family includes the ... |
60-94 |
1.68e-03 |
|
FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.
Pssm-ID: 395718 [Multi-domain] Cd Length: 398 Bit Score: 40.73 E-value: 1.68e-03
10 20 30
....*....|....*....|....*....|....*
gi 157817668 60 IVVVGAGMAGLVAAKLLQDAGHEVTILEASNHIGG 94
Cdd:pfam00890 2 VLVIGGGLAGLAAALAAAEAGLKVAVVEKGQPFGG 36
|
|
| PRK12779 |
PRK12779 |
putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; ... |
60-94 |
1.73e-03 |
|
putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Provisional
Pssm-ID: 183740 [Multi-domain] Cd Length: 944 Bit Score: 41.36 E-value: 1.73e-03
10 20 30
....*....|....*....|....*....|....*
gi 157817668 60 IVVVGAGMAGLVAAKLLQDAGHEVTILEASNHIGG 94
Cdd:PRK12779 309 IAVVGSGPSGLINAYLLAVEGFPVTVFEAFHDLGG 343
|
|
| PRK12778 |
PRK12778 |
bifunctional dihydroorotate dehydrogenase B NAD binding subunit/NADPH-dependent glutamate ... |
39-94 |
1.76e-03 |
|
bifunctional dihydroorotate dehydrogenase B NAD binding subunit/NADPH-dependent glutamate synthase;
Pssm-ID: 237200 [Multi-domain] Cd Length: 752 Bit Score: 41.27 E-value: 1.76e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 157817668 39 DYEAllliaQNGLHTSPSS-----KRIVVVGAGMAGLVAAKLLQDAGHEVTILEASNHIGG 94
Cdd:PRK12778 413 DYER-----ESGNISVPEVaekngKKVAVIGSGPAGLSFAGDLAKRGYDVTVFEALHEIGG 468
|
|
| NirB |
COG1251 |
NAD(P)H-nitrite reductase, large subunit [Energy production and conversion]; |
57-88 |
1.95e-03 |
|
NAD(P)H-nitrite reductase, large subunit [Energy production and conversion];
Pssm-ID: 440863 [Multi-domain] Cd Length: 402 Bit Score: 40.51 E-value: 1.95e-03
10 20 30
....*....|....*....|....*....|....
gi 157817668 57 SKRIVVVGAGMAGLVAAKLL--QDAGHEVTILEA 88
Cdd:COG1251 1 KMRIVIIGAGMAGVRAAEELrkLDPDGEITVIGA 34
|
|
| PRK05329 |
PRK05329 |
glycerol-3-phosphate dehydrogenase subunit GlpB; |
60-86 |
2.00e-03 |
|
glycerol-3-phosphate dehydrogenase subunit GlpB;
Pssm-ID: 235412 Cd Length: 422 Bit Score: 40.60 E-value: 2.00e-03
10 20
....*....|....*....|....*..
gi 157817668 60 IVVVGAGMAGLVAAKLLQDAGHEVTIL 86
Cdd:PRK05329 5 VLVIGGGLAGLTAALAAAEAGKRVALV 31
|
|
| AlaDh_PNT_C |
smart01002 |
Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase catalyzes the ... |
59-99 |
2.01e-03 |
|
Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine.
Pssm-ID: 214966 [Multi-domain] Cd Length: 149 Bit Score: 38.64 E-value: 2.01e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*....
gi 157817668 59 RIVVVGAGMAGLVAAKLLQDAGHEVTIL--------EASNHIGGRVVTL 99
Cdd:smart01002 22 KVVVIGAGVVGLGAAATAKGLGAEVTVLdvrparlrQLESLLGARFTTL 70
|
|
| PRK12770 |
PRK12770 |
putative glutamate synthase subunit beta; Provisional |
54-116 |
2.30e-03 |
|
putative glutamate synthase subunit beta; Provisional
Pssm-ID: 237197 [Multi-domain] Cd Length: 352 Bit Score: 40.36 E-value: 2.30e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 157817668 54 SPSSKRIVVVGAGMAGLVAAKLLQDAGHEVTILEASNHIGGRVVtlrnkeegwhFELGPMRIP 116
Cdd:PRK12770 15 PPTGKKVAIIGAGPAGLAAAGYLACLGYEVHVYDKLPEPGGLML----------FGIPEFRIP 67
|
|
| PanE |
COG1893 |
Ketopantoate reductase [Coenzyme transport and metabolism]; Ketopantoate reductase is part of ... |
59-86 |
2.53e-03 |
|
Ketopantoate reductase [Coenzyme transport and metabolism]; Ketopantoate reductase is part of the Pathway/BioSystem: Pantothenate/CoA biosynthesis
Pssm-ID: 441497 [Multi-domain] Cd Length: 305 Bit Score: 39.84 E-value: 2.53e-03
10 20
....*....|....*....|....*....
gi 157817668 59 RIVVVGAG-MAGLVAAKLLQdAGHEVTIL 86
Cdd:COG1893 2 KIAILGAGaIGGLLGARLAR-AGHDVTLV 29
|
|
| mnmC |
PRK01747 |
bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent ... |
52-88 |
2.77e-03 |
|
bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;
Pssm-ID: 234978 [Multi-domain] Cd Length: 662 Bit Score: 40.21 E-value: 2.77e-03
10 20 30
....*....|....*....|....*....|....*..
gi 157817668 52 HTSPSSKRIVVVGAGMAGLVAAKLLQDAGHEVTILEA 88
Cdd:PRK01747 255 PGSPKARDAAIIGGGIAGAALALALARRGWQVTLYEA 291
|
|
| FMO-like |
pfam00743 |
Flavin-binding monooxygenase-like; This family includes FMO proteins, cyclohexanone ... |
58-105 |
3.38e-03 |
|
Flavin-binding monooxygenase-like; This family includes FMO proteins, cyclohexanone mono-oxygenase and a number of different mono-oxygenases.
Pssm-ID: 395602 [Multi-domain] Cd Length: 531 Bit Score: 40.15 E-value: 3.38e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*...
gi 157817668 58 KRIVVVGAGMAGLVAAKLLQDAGHEVTILEASNHIGGRVVTLRNKEEG 105
Cdd:pfam00743 2 KKVAVIGAGVSGLASIKCCLEEGLEPTCFERSDDIGGLWRFTENVEEG 49
|
|
| TrkA |
COG0569 |
Trk/Ktr K+ transport system regulatory component TrkA/KtrA/KtrC, RCK domain [Inorganic ion ... |
50-87 |
3.78e-03 |
|
Trk/Ktr K+ transport system regulatory component TrkA/KtrA/KtrC, RCK domain [Inorganic ion transport and metabolism, Signal transduction mechanisms];
Pssm-ID: 440335 [Multi-domain] Cd Length: 296 Bit Score: 39.28 E-value: 3.78e-03
10 20 30
....*....|....*....|....*....|....*...
gi 157817668 50 GLHTSPSSKRIVVVGAGMAGLVAAKLLQDAGHEVTILE 87
Cdd:COG0569 88 ERGIKKLKMHVIIIGAGRVGRSLARELEEEGHDVVVID 125
|
|
| PRK12831 |
PRK12831 |
putative oxidoreductase; Provisional |
58-97 |
3.80e-03 |
|
putative oxidoreductase; Provisional
Pssm-ID: 183780 [Multi-domain] Cd Length: 464 Bit Score: 39.62 E-value: 3.80e-03
10 20 30 40
....*....|....*....|....*....|....*....|
gi 157817668 58 KRIVVVGAGMAGLVAAKLLQDAGHEVTILEASNHIGGRVV 97
Cdd:PRK12831 141 KKVAVIGSGPAGLTCAGDLAKMGYDVTIFEALHEPGGVLV 180
|
|
| HI0933_like |
pfam03486 |
HI0933-like protein; |
58-93 |
3.96e-03 |
|
HI0933-like protein;
Pssm-ID: 427330 [Multi-domain] Cd Length: 406 Bit Score: 39.49 E-value: 3.96e-03
10 20 30
....*....|....*....|....*....|....*.
gi 157817668 58 KRIVVVGAGMAGLVAAKLLQDAGHEVTILEASNHIG 93
Cdd:pfam03486 1 FDVIVIGGGAAGLMAAISAAKRGRRVLLIEKGKKLG 36
|
|
| NDP-sugDHase |
TIGR03026 |
nucleotide sugar dehydrogenase; Enzymes in this family catalyze the NAD-dependent ... |
58-103 |
4.84e-03 |
|
nucleotide sugar dehydrogenase; Enzymes in this family catalyze the NAD-dependent alcohol-to-acid oxidation of nucleotide-linked sugars. Examples include UDP-glucose 6-dehydrogenase (1.1.1.22), GDP-mannose 6-dehydrogenase (1.1.1.132), UDP-N-acetylglucosamine 6-dehydrogenase (1.1.1.136), UDP-N-acetyl-D-galactosaminuronic acid dehydrogenase, and UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase. These enzymes are most often involved in the biosynthesis of polysaccharides and are often found in operons devoted to that purpose. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.
Pssm-ID: 274399 [Multi-domain] Cd Length: 409 Bit Score: 39.52 E-value: 4.84e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*.
gi 157817668 58 KRIVVVGAGMAGLVAAKLLQDAGHEVTILEASNhigGRVVTLRNKE 103
Cdd:TIGR03026 1 MKIAVIGLGYVGLPLAALLADLGHDVTGVDIDQ---EKVDKLNKGK 43
|
|
| PRK06847 |
PRK06847 |
hypothetical protein; Provisional |
55-88 |
7.50e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 235874 [Multi-domain] Cd Length: 375 Bit Score: 38.70 E-value: 7.50e-03
10 20 30
....*....|....*....|....*....|....
gi 157817668 55 PSSKRIVVVGAGMAGLVAAKLLQDAGHEVTILEA 88
Cdd:PRK06847 2 AAVKKVLIVGGGIGGLSAAIALRRAGIAVDLVEI 35
|
|
| PRK07588 |
PRK07588 |
FAD-binding domain; |
58-97 |
8.39e-03 |
|
FAD-binding domain;
Pssm-ID: 169028 [Multi-domain] Cd Length: 391 Bit Score: 38.56 E-value: 8.39e-03
10 20 30 40
....*....|....*....|....*....|....*....|..
gi 157817668 58 KRIVVVGAGMAGLVAAKLLQDAGHEVTILEASNHI--GGRVV 97
Cdd:PRK07588 1 MKVAISGAGIAGPTLAYWLRRYGHEPTLIERAPELrtGGYMV 42
|
|
| PRK10157 |
PRK10157 |
putative oxidoreductase FixC; Provisional |
61-98 |
8.41e-03 |
|
putative oxidoreductase FixC; Provisional
Pssm-ID: 182273 [Multi-domain] Cd Length: 428 Bit Score: 38.74 E-value: 8.41e-03
10 20 30
....*....|....*....|....*....|....*...
gi 157817668 61 VVVGAGMAGLVAAKLLQDAGHEVTILEASNHIGGRVVT 98
Cdd:PRK10157 9 IIVGAGLAGSVAALVLAREGAQVLVIERGNSAGAKNVT 46
|
|
| |
