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Conserved domains on  [gi|157818729|ref|NP_001099665|]
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spermatogenesis-associated protein 33 [Rattus norvegicus]

Protein Classification

spermatogenesis-associated protein 33( domain architecture ID 10634102)

spermatogenesis-associated protein 33 (SPATA33) is a DUF4609 domain-containing protein that is predominantly expressed in the testis and associated with spermatogenesis

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF4609 pfam15382
Domain of unknown function (DUF4609); This family of proteins is found in eukaryotes. Proteins ...
 67-134 3.63e-37

Domain of unknown function (DUF4609); This family of proteins is found in eukaryotes. Proteins in this family are typically between 70 and 139 amino acids in length.


:

Pssm-ID: 464689  Cd Length: 68  Bit Score: 121.12  E-value: 3.63e-37
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 157818729   67 DKPDTKQRSSKKRSVIPQIIITRASNETLISYGIPDSDEQRTIREHADWGPYYRHRSPSTIAAYEVQN 134
Cdd:pfam15382   1 EKPDVKQKSSKKKVVIPQIIITRASNETLISYSSTGSEEQRTIREQADWGPYSRHRNPSTVDAYNLQT 68
 
Name Accession Description Interval E-value
DUF4609 pfam15382
Domain of unknown function (DUF4609); This family of proteins is found in eukaryotes. Proteins ...
 67-134 3.63e-37

Domain of unknown function (DUF4609); This family of proteins is found in eukaryotes. Proteins in this family are typically between 70 and 139 amino acids in length.


Pssm-ID: 464689  Cd Length: 68  Bit Score: 121.12  E-value: 3.63e-37
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 157818729   67 DKPDTKQRSSKKRSVIPQIIITRASNETLISYGIPDSDEQRTIREHADWGPYYRHRSPSTIAAYEVQN 134
Cdd:pfam15382   1 EKPDVKQKSSKKKVVIPQIIITRASNETLISYSSTGSEEQRTIREQADWGPYSRHRNPSTVDAYNLQT 68
 
Name Accession Description Interval E-value
DUF4609 pfam15382
Domain of unknown function (DUF4609); This family of proteins is found in eukaryotes. Proteins ...
 67-134 3.63e-37

Domain of unknown function (DUF4609); This family of proteins is found in eukaryotes. Proteins in this family are typically between 70 and 139 amino acids in length.


Pssm-ID: 464689  Cd Length: 68  Bit Score: 121.12  E-value: 3.63e-37
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 157818729   67 DKPDTKQRSSKKRSVIPQIIITRASNETLISYGIPDSDEQRTIREHADWGPYYRHRSPSTIAAYEVQN 134
Cdd:pfam15382   1 EKPDVKQKSSKKKVVIPQIIITRASNETLISYSSTGSEEQRTIREQADWGPYSRHRNPSTVDAYNLQT 68
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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