|
Name |
Accession |
Description |
Interval |
E-value |
| CG-1 |
smart01076 |
CG-1 domains are highly conserved domains of about 130 amino-acid residues; The domains ... |
34-150 |
3.71e-70 |
|
CG-1 domains are highly conserved domains of about 130 amino-acid residues; The domains contain a predicted bipartite NLS and are named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs.
:
Pssm-ID: 198144 Cd Length: 118 Bit Score: 229.60 E-value: 3.71e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300360490 34 LPPERLRWNTNEEIASYLITFEKHDEWLSCAPKTRPQNGSIILYNRKKVKY-RKDGYLWKKRKDGKTTREDHMKLKVQGM 112
Cdd:smart01076 1 LPEAKHRWLTPEEIAAILINFDKHTEWLTTSPPTRPKSGSLFLFNRKKLKYfRKDGYNWKKKKDGKTVREDHEKLKVGGI 80
|
90 100 110
....*....|....*....|....*....|....*...
gi 300360490 113 ECLYGCYVHSSIVPTFHRRCYWLLQNPDIVLVHYLNVP 150
Cdd:smart01076 81 ECLHCYYAHSEINPTFHRRCYWLLQNPDIVLVHYLNVP 118
|
|
| TIG |
pfam01833 |
IPT/TIG domain; This family consists of a domain that has an immunoglobulin like fold. These ... |
535-615 |
6.03e-10 |
|
IPT/TIG domain; This family consists of a domain that has an immunoglobulin like fold. These domains are found in cell surface receptors such as Met and Ron as well as in intracellular transcription factors where it is involved in DNA binding. CAUTION: This family does not currently recognize a significant number of members.
:
Pssm-ID: 460355 [Multi-domain] Cd Length: 84 Bit Score: 57.07 E-value: 6.03e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300360490 535 TITDFSPEWSYPEGGVKVLITGP-WTEAAEHYSCVFDHIAVPASLVQPGVLRCYCPAHEVGLVSLQVAGREGPL-SASVL 612
Cdd:pfam01833 2 VITSISPSSGPASGGTTITITGSnFGTDSSDLKVTIGGTPCTVISVSSTTIVCTTPPGTSGLVNVSVTVGGGGIsSSPLT 81
|
...
gi 300360490 613 FEY 615
Cdd:pfam01833 82 FTY 84
|
|
| ANKYR |
COG0666 |
Ankyrin repeat [Signal transduction mechanisms]; |
711-812 |
1.24e-09 |
|
Ankyrin repeat [Signal transduction mechanisms];
:
Pssm-ID: 440430 [Multi-domain] Cd Length: 289 Bit Score: 60.74 E-value: 1.24e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300360490 711 RGMSLLHLAAAQGYARLIETLsqwrsvetgsldLEQEADPLNVDHFSCTPLMWACALGHLEAAVLLFcwNRQA-LSIPDS 789
Cdd:COG0666 152 DGNTPLHLAAANGNLEIVKLL------------LEAGADVNARDNDGETPLHLAAENGHLEIVKLLL--EAGAdVNAKDN 217
|
90 100
....*....|....*....|...
gi 300360490 790 LGRLPLSVAHSRGHVRLARCLEE 812
Cdd:COG0666 218 DGKTALDLAAENGNLEIVKLLLE 240
|
|
| PTZ00322 super family |
cl31426 |
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional |
744-883 |
1.80e-04 |
|
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
The actual alignment was detected with superfamily member PTZ00322:
Pssm-ID: 140343 [Multi-domain] Cd Length: 664 Bit Score: 45.66 E-value: 1.80e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300360490 744 LEQEADPLNVDHFSCTPLMWACALGHLEAAVLLFCWNRQAlSIPDSLGRLPLSVAHSRGHVRLARCLEELQRQELSVEhp 823
Cdd:PTZ00322 102 LTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADP-TLLDKDGKTPLELAEENGFREVVQLLSRHSQCHFELG-- 178
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 300360490 824 lalspQSSSPDTglssvsspSELSDGTFSVTSAYSSAPDGSPPPAPMLASEIS-METIPGQ 883
Cdd:PTZ00322 179 -----ANAKPDS--------FTGKPPSLEDSPISSHHPDFSAVPQPMMGSLIViMVGLPGR 226
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| CG-1 |
smart01076 |
CG-1 domains are highly conserved domains of about 130 amino-acid residues; The domains ... |
34-150 |
3.71e-70 |
|
CG-1 domains are highly conserved domains of about 130 amino-acid residues; The domains contain a predicted bipartite NLS and are named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs.
Pssm-ID: 198144 Cd Length: 118 Bit Score: 229.60 E-value: 3.71e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300360490 34 LPPERLRWNTNEEIASYLITFEKHDEWLSCAPKTRPQNGSIILYNRKKVKY-RKDGYLWKKRKDGKTTREDHMKLKVQGM 112
Cdd:smart01076 1 LPEAKHRWLTPEEIAAILINFDKHTEWLTTSPPTRPKSGSLFLFNRKKLKYfRKDGYNWKKKKDGKTVREDHEKLKVGGI 80
|
90 100 110
....*....|....*....|....*....|....*...
gi 300360490 113 ECLYGCYVHSSIVPTFHRRCYWLLQNPDIVLVHYLNVP 150
Cdd:smart01076 81 ECLHCYYAHSEINPTFHRRCYWLLQNPDIVLVHYLNVP 118
|
|
| CG-1 |
pfam03859 |
CG-1 domain; CG-1 domains are highly conserved domains of about 130 amino-acid residues ... |
40-149 |
2.40e-54 |
|
CG-1 domain; CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs.
Pssm-ID: 461077 Cd Length: 114 Bit Score: 184.78 E-value: 2.40e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300360490 40 RWNTNEEIASYLITFEKHDEWLSCAPKTRPQNGSIILYNRKKVKY-RKDGYLWKKRKDGKTTREDHMKLKVQGMECLYGC 118
Cdd:pfam03859 3 RWLKPQEILAILLNYDPYGFCITPEPPPRPPSGSLFLFDRKKLRYfRKDGHNWRKKKDGKTVREDHEKLKVGGVEAIHCY 82
|
90 100 110
....*....|....*....|....*....|..
gi 300360490 119 YVHSSIVPTFHRRCYWLLQNP-DIVLVHYLNV 149
Cdd:pfam03859 83 YAHSEDNPTFQRRIYWLLDSDyHIVLVHYLNV 114
|
|
| TIG |
pfam01833 |
IPT/TIG domain; This family consists of a domain that has an immunoglobulin like fold. These ... |
535-615 |
6.03e-10 |
|
IPT/TIG domain; This family consists of a domain that has an immunoglobulin like fold. These domains are found in cell surface receptors such as Met and Ron as well as in intracellular transcription factors where it is involved in DNA binding. CAUTION: This family does not currently recognize a significant number of members.
Pssm-ID: 460355 [Multi-domain] Cd Length: 84 Bit Score: 57.07 E-value: 6.03e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300360490 535 TITDFSPEWSYPEGGVKVLITGP-WTEAAEHYSCVFDHIAVPASLVQPGVLRCYCPAHEVGLVSLQVAGREGPL-SASVL 612
Cdd:pfam01833 2 VITSISPSSGPASGGTTITITGSnFGTDSSDLKVTIGGTPCTVISVSSTTIVCTTPPGTSGLVNVSVTVGGGGIsSSPLT 81
|
...
gi 300360490 613 FEY 615
Cdd:pfam01833 82 FTY 84
|
|
| ANKYR |
COG0666 |
Ankyrin repeat [Signal transduction mechanisms]; |
711-812 |
1.24e-09 |
|
Ankyrin repeat [Signal transduction mechanisms];
Pssm-ID: 440430 [Multi-domain] Cd Length: 289 Bit Score: 60.74 E-value: 1.24e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300360490 711 RGMSLLHLAAAQGYARLIETLsqwrsvetgsldLEQEADPLNVDHFSCTPLMWACALGHLEAAVLLFcwNRQA-LSIPDS 789
Cdd:COG0666 152 DGNTPLHLAAANGNLEIVKLL------------LEAGADVNARDNDGETPLHLAAENGHLEIVKLLL--EAGAdVNAKDN 217
|
90 100
....*....|....*....|...
gi 300360490 790 LGRLPLSVAHSRGHVRLARCLEE 812
Cdd:COG0666 218 DGKTALDLAAENGNLEIVKLLLE 240
|
|
| Ank_2 |
pfam12796 |
Ankyrin repeats (3 copies); |
716-808 |
1.11e-06 |
|
Ankyrin repeats (3 copies);
Pssm-ID: 463710 [Multi-domain] Cd Length: 91 Bit Score: 47.80 E-value: 1.11e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300360490 716 LHLAAAQGYARLIETLsqwrsvetgsldLEQEADPLNVDHFSCTPLMWACALGHLEAAVLLfcWNRQALSIPDSlGRLPL 795
Cdd:pfam12796 1 LHLAAKNGNLELVKLL------------LENGADANLQDKNGRTALHLAAKNGHLEIVKLL--LEHADVNLKDN-GRTAL 65
|
90
....*....|...
gi 300360490 796 SVAHSRGHVRLAR 808
Cdd:pfam12796 66 HYAARSGHLEIVK 78
|
|
| PTZ00322 |
PTZ00322 |
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional |
744-883 |
1.80e-04 |
|
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Pssm-ID: 140343 [Multi-domain] Cd Length: 664 Bit Score: 45.66 E-value: 1.80e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300360490 744 LEQEADPLNVDHFSCTPLMWACALGHLEAAVLLFCWNRQAlSIPDSLGRLPLSVAHSRGHVRLARCLEELQRQELSVEhp 823
Cdd:PTZ00322 102 LTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADP-TLLDKDGKTPLELAEENGFREVVQLLSRHSQCHFELG-- 178
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 300360490 824 lalspQSSSPDTglssvsspSELSDGTFSVTSAYSSAPDGSPPPAPMLASEIS-METIPGQ 883
Cdd:PTZ00322 179 -----ANAKPDS--------FTGKPPSLEDSPISSHHPDFSAVPQPMMGSLIViMVGLPGR 226
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| CG-1 |
smart01076 |
CG-1 domains are highly conserved domains of about 130 amino-acid residues; The domains ... |
34-150 |
3.71e-70 |
|
CG-1 domains are highly conserved domains of about 130 amino-acid residues; The domains contain a predicted bipartite NLS and are named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs.
Pssm-ID: 198144 Cd Length: 118 Bit Score: 229.60 E-value: 3.71e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300360490 34 LPPERLRWNTNEEIASYLITFEKHDEWLSCAPKTRPQNGSIILYNRKKVKY-RKDGYLWKKRKDGKTTREDHMKLKVQGM 112
Cdd:smart01076 1 LPEAKHRWLTPEEIAAILINFDKHTEWLTTSPPTRPKSGSLFLFNRKKLKYfRKDGYNWKKKKDGKTVREDHEKLKVGGI 80
|
90 100 110
....*....|....*....|....*....|....*...
gi 300360490 113 ECLYGCYVHSSIVPTFHRRCYWLLQNPDIVLVHYLNVP 150
Cdd:smart01076 81 ECLHCYYAHSEINPTFHRRCYWLLQNPDIVLVHYLNVP 118
|
|
| CG-1 |
pfam03859 |
CG-1 domain; CG-1 domains are highly conserved domains of about 130 amino-acid residues ... |
40-149 |
2.40e-54 |
|
CG-1 domain; CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs.
Pssm-ID: 461077 Cd Length: 114 Bit Score: 184.78 E-value: 2.40e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300360490 40 RWNTNEEIASYLITFEKHDEWLSCAPKTRPQNGSIILYNRKKVKY-RKDGYLWKKRKDGKTTREDHMKLKVQGMECLYGC 118
Cdd:pfam03859 3 RWLKPQEILAILLNYDPYGFCITPEPPPRPPSGSLFLFDRKKLRYfRKDGHNWRKKKDGKTVREDHEKLKVGGVEAIHCY 82
|
90 100 110
....*....|....*....|....*....|..
gi 300360490 119 YVHSSIVPTFHRRCYWLLQNP-DIVLVHYLNV 149
Cdd:pfam03859 83 YAHSEDNPTFQRRIYWLLDSDyHIVLVHYLNV 114
|
|
| TIG |
pfam01833 |
IPT/TIG domain; This family consists of a domain that has an immunoglobulin like fold. These ... |
535-615 |
6.03e-10 |
|
IPT/TIG domain; This family consists of a domain that has an immunoglobulin like fold. These domains are found in cell surface receptors such as Met and Ron as well as in intracellular transcription factors where it is involved in DNA binding. CAUTION: This family does not currently recognize a significant number of members.
Pssm-ID: 460355 [Multi-domain] Cd Length: 84 Bit Score: 57.07 E-value: 6.03e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300360490 535 TITDFSPEWSYPEGGVKVLITGP-WTEAAEHYSCVFDHIAVPASLVQPGVLRCYCPAHEVGLVSLQVAGREGPL-SASVL 612
Cdd:pfam01833 2 VITSISPSSGPASGGTTITITGSnFGTDSSDLKVTIGGTPCTVISVSSTTIVCTTPPGTSGLVNVSVTVGGGGIsSSPLT 81
|
...
gi 300360490 613 FEY 615
Cdd:pfam01833 82 FTY 84
|
|
| ANKYR |
COG0666 |
Ankyrin repeat [Signal transduction mechanisms]; |
711-812 |
1.24e-09 |
|
Ankyrin repeat [Signal transduction mechanisms];
Pssm-ID: 440430 [Multi-domain] Cd Length: 289 Bit Score: 60.74 E-value: 1.24e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300360490 711 RGMSLLHLAAAQGYARLIETLsqwrsvetgsldLEQEADPLNVDHFSCTPLMWACALGHLEAAVLLFcwNRQA-LSIPDS 789
Cdd:COG0666 152 DGNTPLHLAAANGNLEIVKLL------------LEAGADVNARDNDGETPLHLAAENGHLEIVKLLL--EAGAdVNAKDN 217
|
90 100
....*....|....*....|...
gi 300360490 790 LGRLPLSVAHSRGHVRLARCLEE 812
Cdd:COG0666 218 DGKTALDLAAENGNLEIVKLLLE 240
|
|
| ANKYR |
COG0666 |
Ankyrin repeat [Signal transduction mechanisms]; |
711-812 |
3.36e-09 |
|
Ankyrin repeat [Signal transduction mechanisms];
Pssm-ID: 440430 [Multi-domain] Cd Length: 289 Bit Score: 59.58 E-value: 3.36e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300360490 711 RGMSLLHLAAAQGYARLIETLsqwrsvetgsldLEQEADPLNVDHFSCTPLMWACALGHLEAAVLLFcwNRQA-LSIPDS 789
Cdd:COG0666 119 DGETPLHLAAYNGNLEIVKLL------------LEAGADVNAQDNDGNTPLHLAAANGNLEIVKLLL--EAGAdVNARDN 184
|
90 100
....*....|....*....|...
gi 300360490 790 LGRLPLSVAHSRGHVRLARCLEE 812
Cdd:COG0666 185 DGETPLHLAAENGHLEIVKLLLE 207
|
|
| ANKYR |
COG0666 |
Ankyrin repeat [Signal transduction mechanisms]; |
712-810 |
3.09e-08 |
|
Ankyrin repeat [Signal transduction mechanisms];
Pssm-ID: 440430 [Multi-domain] Cd Length: 289 Bit Score: 56.50 E-value: 3.09e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300360490 712 GMSLLHLAAAQGYARLIETLsqwrsvetgsldLEQEADPLNVDHFSCTPLMWACALGHLEAAVLLFcwNRQA-LSIPDSL 790
Cdd:COG0666 87 GNTLLHAAARNGDLEIVKLL------------LEAGADVNARDKDGETPLHLAAYNGNLEIVKLLL--EAGAdVNAQDND 152
|
90 100
....*....|....*....|
gi 300360490 791 GRLPLSVAHSRGHVRLARCL 810
Cdd:COG0666 153 GNTPLHLAAANGNLEIVKLL 172
|
|
| Ank_2 |
pfam12796 |
Ankyrin repeats (3 copies); |
716-808 |
1.11e-06 |
|
Ankyrin repeats (3 copies);
Pssm-ID: 463710 [Multi-domain] Cd Length: 91 Bit Score: 47.80 E-value: 1.11e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300360490 716 LHLAAAQGYARLIETLsqwrsvetgsldLEQEADPLNVDHFSCTPLMWACALGHLEAAVLLfcWNRQALSIPDSlGRLPL 795
Cdd:pfam12796 1 LHLAAKNGNLELVKLL------------LENGADANLQDKNGRTALHLAAKNGHLEIVKLL--LEHADVNLKDN-GRTAL 65
|
90
....*....|...
gi 300360490 796 SVAHSRGHVRLAR 808
Cdd:pfam12796 66 HYAARSGHLEIVK 78
|
|
| PTZ00322 |
PTZ00322 |
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional |
744-883 |
1.80e-04 |
|
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Pssm-ID: 140343 [Multi-domain] Cd Length: 664 Bit Score: 45.66 E-value: 1.80e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 300360490 744 LEQEADPLNVDHFSCTPLMWACALGHLEAAVLLFCWNRQAlSIPDSLGRLPLSVAHSRGHVRLARCLEELQRQELSVEhp 823
Cdd:PTZ00322 102 LTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADP-TLLDKDGKTPLELAEENGFREVVQLLSRHSQCHFELG-- 178
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 300360490 824 lalspQSSSPDTglssvsspSELSDGTFSVTSAYSSAPDGSPPPAPMLASEIS-METIPGQ 883
Cdd:PTZ00322 179 -----ANAKPDS--------FTGKPPSLEDSPISSHHPDFSAVPQPMMGSLIViMVGLPGR 226
|
|
| Ank_2 |
pfam12796 |
Ankyrin repeats (3 copies); |
712-778 |
1.61e-03 |
|
Ankyrin repeats (3 copies);
Pssm-ID: 463710 [Multi-domain] Cd Length: 91 Bit Score: 38.94 E-value: 1.61e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 300360490 712 GMSLLHLAAAQGYARLIETLsqwrsvetgsldLEQEAdpLNVDHFSCTPLMWACALGHLEAAVLLFC 778
Cdd:pfam12796 30 GRTALHLAAKNGHLEIVKLL------------LEHAD--VNLKDNGRTALHYAARSGHLEIVKLLLE 82
|
|
| Ank_5 |
pfam13857 |
Ankyrin repeats (many copies); |
746-798 |
3.98e-03 |
|
Ankyrin repeats (many copies);
Pssm-ID: 433530 [Multi-domain] Cd Length: 56 Bit Score: 36.56 E-value: 3.98e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 300360490 746 QEADPLNVDH---FSCTPLMWACALGHLEAAVLLFCwNRQALSIPDSLGRLPLSVA 798
Cdd:pfam13857 2 LEHGPIDLNRldgEGYTPLHVAAKYGALEIVRVLLA-YGVDLNLKDEEGLTALDLA 56
|
|
| Ank_4 |
pfam13637 |
Ankyrin repeats (many copies); |
712-776 |
5.67e-03 |
|
Ankyrin repeats (many copies);
Pssm-ID: 372654 [Multi-domain] Cd Length: 54 Bit Score: 36.10 E-value: 5.67e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 300360490 712 GMSLLHLAAAQGYARLIETLsqwrsvetgsldLEQEADPLNVDHFSCTPLMWACALGHLEAAVLL 776
Cdd:pfam13637 1 ELTALHAAAASGHLELLRLL------------LEKGADINAVDGNGETALHFAASNGNVEVLKLL 53
|
|
| |
